| 27567083 |
27567106 |
9 |
+ |
26472758 |
Jiyoye |
viability |
GCAACAGCTGGAGATGGCGGTGG |
C9orf72 |
ENSG00000147894 |
0.5067110550567879 |
[41] |
[44] |
4 |
hSpCas9 |
negative selection |
22012 |
27566789 |
27566812 |
9 |
- |
26472758 |
Jiyoye |
viability |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
-0.17778711921528267 |
[371] |
[247] |
-1 |
hSpCas9 |
negative selection |
22013 |
27566951 |
27566974 |
9 |
- |
26472758 |
Jiyoye |
viability |
GAACAGGTACTTCTCAGTGATGG |
C9orf72 |
ENSG00000147894 |
1.4239836691924272 |
[127] |
[258] |
8 |
hSpCas9 |
negative selection |
22014 |
27566907 |
27566930 |
9 |
+ |
26472758 |
Jiyoye |
viability |
GGATTTCTCCATTTAGAGTGTGG |
C9orf72 |
ENSG00000147894 |
0.5415713218444922 |
[337] |
[370] |
4 |
hSpCas9 |
negative selection |
22015 |
27566723 |
27566746 |
9 |
+ |
26472758 |
Jiyoye |
viability |
TCAACACACACTCTATGAAGTGG |
C9orf72 |
ENSG00000147894 |
0.3740085175706741 |
[175] |
[171] |
3 |
hSpCas9 |
negative selection |
22016 |
27562439 |
27562462 |
9 |
+ |
26472758 |
Jiyoye |
viability |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
0.1703918678638039 |
[402] |
[341] |
1 |
hSpCas9 |
negative selection |
22017 |
27566888 |
27566911 |
9 |
- |
26472758 |
Jiyoye |
viability |
ATCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
-0.15131490785409185 |
[242] |
[164] |
-1 |
hSpCas9 |
negative selection |
22018 |
27566967 |
27566990 |
9 |
- |
26472758 |
Jiyoye |
viability |
TTGGGCTCCAAAGACAGAACAGG |
C9orf72 |
ENSG00000147894 |
-0.6252460961865043 |
[44] |
[21] |
-4 |
hSpCas9 |
negative selection |
22019 |
27561597 |
27561620 |
9 |
- |
26472758 |
Jiyoye |
viability |
ATTGGTGACAGCTGTCATGAAGG |
C9orf72 |
ENSG00000147894 |
0.2007245040384471 |
[14] |
[12] |
1 |
hSpCas9 |
negative selection |
22020 |
27566805 |
27566828 |
9 |
- |
26472758 |
Jiyoye |
viability |
CTTTGATGGAAACTGGAATGGGG |
C9orf72 |
ENSG00000147894 |
-0.8738116937414224 |
[468] |
[192] |
-6 |
hSpCas9 |
negative selection |
22021 |
27567083 |
27567106 |
9 |
+ |
26472758 |
KBM7 |
viability |
GCAACAGCTGGAGATGGCGGTGG |
C9orf72 |
ENSG00000147894 |
0.23629317396090338 |
[441,229] |
[265,104] |
2 |
hSpCas9 |
negative selection |
213130 |
27566789 |
27566812 |
9 |
- |
26472758 |
KBM7 |
viability |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.3748012817425921 |
[1700,1784] |
[910,1212] |
4 |
hSpCas9 |
negative selection |
213131 |
27566951 |
27566974 |
9 |
- |
26472758 |
KBM7 |
viability |
GAACAGGTACTTCTCAGTGATGG |
C9orf72 |
ENSG00000147894 |
0.13387949659063325 |
[938,851] |
[613,325] |
1 |
hSpCas9 |
negative selection |
213132 |
27566907 |
27566930 |
9 |
+ |
26472758 |
KBM7 |
viability |
GGATTTCTCCATTTAGAGTGTGG |
C9orf72 |
ENSG00000147894 |
0.28403463769356807 |
[1748,819] |
[791,639] |
3 |
hSpCas9 |
negative selection |
213133 |
27566723 |
27566746 |
9 |
+ |
26472758 |
KBM7 |
viability |
TCAACACACACTCTATGAAGTGG |
C9orf72 |
ENSG00000147894 |
-0.07915564207956594 |
[953,1023] |
[586,315] |
-1 |
hSpCas9 |
negative selection |
213134 |
27562439 |
27562462 |
9 |
+ |
26472758 |
KBM7 |
viability |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
0.42742151750650237 |
[1445,1613] |
[1126,843] |
4 |
hSpCas9 |
negative selection |
213135 |
27566888 |
27566911 |
9 |
- |
26472758 |
KBM7 |
viability |
ATCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
0.15444349490741904 |
[942,929] |
[470,510] |
1 |
hSpCas9 |
negative selection |
213136 |
27566967 |
27566990 |
9 |
- |
26472758 |
KBM7 |
viability |
TTGGGCTCCAAAGACAGAACAGG |
C9orf72 |
ENSG00000147894 |
0.6432132503327543 |
[284,229] |
[103,262] |
7 |
hSpCas9 |
negative selection |
213137 |
27561597 |
27561620 |
9 |
- |
26472758 |
KBM7 |
viability |
ATTGGTGACAGCTGTCATGAAGG |
C9orf72 |
ENSG00000147894 |
1.5958825390461056 |
[79,50] |
[186,5] |
9 |
hSpCas9 |
negative selection |
213138 |
27566805 |
27566828 |
9 |
- |
26472758 |
KBM7 |
viability |
CTTTGATGGAAACTGGAATGGGG |
C9orf72 |
ENSG00000147894 |
0.45248686175715 |
[814,1281] |
[763,629] |
5 |
hSpCas9 |
negative selection |
213139 |
27567083 |
27567106 |
9 |
+ |
26472758 |
Raji |
viability |
GCAACAGCTGGAGATGGCGGTGG |
C9orf72 |
ENSG00000147894 |
2.0756746756462614 |
[91] |
[89] |
9 |
hSpCas9 |
negative selection |
404248 |
27566789 |
27566812 |
9 |
- |
26472758 |
Raji |
viability |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.2025407684139393 |
[879] |
[234] |
2 |
hSpCas9 |
negative selection |
404249 |
27566951 |
27566974 |
9 |
- |
26472758 |
Raji |
viability |
GAACAGGTACTTCTCAGTGATGG |
C9orf72 |
ENSG00000147894 |
1.6718371772943348 |
[306] |
[226] |
9 |
hSpCas9 |
negative selection |
404250 |
27566907 |
27566930 |
9 |
+ |
26472758 |
Raji |
viability |
GGATTTCTCCATTTAGAGTGTGG |
C9orf72 |
ENSG00000147894 |
0.4753259169171422 |
[684] |
[220] |
4 |
hSpCas9 |
negative selection |
404251 |
27566723 |
27566746 |
9 |
+ |
26472758 |
Raji |
viability |
TCAACACACACTCTATGAAGTGG |
C9orf72 |
ENSG00000147894 |
0.6212510613118679 |
[408] |
[145] |
6 |
hSpCas9 |
negative selection |
404252 |
27562439 |
27562462 |
9 |
+ |
26472758 |
Raji |
viability |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
0.44853890594003465 |
[640] |
[202] |
4 |
hSpCas9 |
negative selection |
404253 |
27566888 |
27566911 |
9 |
- |
26472758 |
Raji |
viability |
ATCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
0.35710358792651253 |
[507] |
[150] |
3 |
hSpCas9 |
negative selection |
404254 |
27566967 |
27566990 |
9 |
- |
26472758 |
Raji |
viability |
TTGGGCTCCAAAGACAGAACAGG |
C9orf72 |
ENSG00000147894 |
-0.47757896534755684 |
[119] |
[19] |
-4 |
hSpCas9 |
negative selection |
404255 |
27561597 |
27561620 |
9 |
- |
26472758 |
Raji |
viability |
ATTGGTGACAGCTGTCATGAAGG |
C9orf72 |
ENSG00000147894 |
0.15318722498672432 |
[30] |
[7] |
1 |
hSpCas9 |
negative selection |
404256 |
27566805 |
27566828 |
9 |
- |
26472758 |
Raji |
viability |
CTTTGATGGAAACTGGAATGGGG |
C9orf72 |
ENSG00000147894 |
0.4724958093207611 |
[440] |
[141] |
4 |
hSpCas9 |
negative selection |
404257 |
27567083 |
27567106 |
9 |
+ |
26472758 |
K562 |
viability |
GCAACAGCTGGAGATGGCGGTGG |
C9orf72 |
ENSG00000147894 |
0.5553478236045521 |
[236] |
[293] |
4 |
hSpCas9 |
negative selection |
595366 |
27566789 |
27566812 |
9 |
- |
26472758 |
K562 |
viability |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.8162572063877129 |
[1545] |
[2297] |
6 |
hSpCas9 |
negative selection |
595367 |
27566951 |
27566974 |
9 |
- |
26472758 |
K562 |
viability |
GAACAGGTACTTCTCAGTGATGG |
C9orf72 |
ENSG00000147894 |
1.0665918587634433 |
[594] |
[1051] |
8 |
hSpCas9 |
negative selection |
595368 |
27566907 |
27566930 |
9 |
+ |
26472758 |
K562 |
viability |
GGATTTCTCCATTTAGAGTGTGG |
C9orf72 |
ENSG00000147894 |
0.33787791871036044 |
[1030] |
[1099] |
2 |
hSpCas9 |
negative selection |
595369 |
27566723 |
27566746 |
9 |
+ |
26472758 |
K562 |
viability |
TCAACACACACTCTATGAAGTGG |
C9orf72 |
ENSG00000147894 |
0.12331369326459418 |
[1005] |
[924] |
0 |
hSpCas9 |
negative selection |
595370 |
27562439 |
27562462 |
9 |
+ |
26472758 |
K562 |
viability |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
0.5868742248103911 |
[1283] |
[1627] |
5 |
hSpCas9 |
negative selection |
595371 |
27566888 |
27566911 |
9 |
- |
26472758 |
K562 |
viability |
ATCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
0.6924712841732534 |
[809] |
[1104] |
6 |
hSpCas9 |
negative selection |
595372 |
27566967 |
27566990 |
9 |
- |
26472758 |
K562 |
viability |
TTGGGCTCCAAAGACAGAACAGG |
C9orf72 |
ENSG00000147894 |
0.4313501544144492 |
[252] |
[287] |
3 |
hSpCas9 |
negative selection |
595373 |
27561597 |
27561620 |
9 |
- |
26472758 |
K562 |
viability |
ATTGGTGACAGCTGTCATGAAGG |
C9orf72 |
ENSG00000147894 |
4.136042566621655 |
[18] |
[281] |
9 |
hSpCas9 |
negative selection |
595374 |
27566805 |
27566828 |
9 |
- |
26472758 |
K562 |
viability |
CTTTGATGGAAACTGGAATGGGG |
C9orf72 |
ENSG00000147894 |
0.4995880597514417 |
[888] |
[1060] |
4 |
hSpCas9 |
negative selection |
595375 |
27560242 |
27560265 |
9 |
+ |
26627737 |
DLD1 |
viability |
TGCACTGCTACCTACTACAACGG |
C9orf72 |
ENSG00000147894 |
0.17131654782389605 |
[1404] |
[470,502,507] |
1 |
hSpCas9 |
negative selection |
842594 |
27566888 |
27566911 |
9 |
- |
26627737 |
DLD1 |
viability |
ATCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
-0.05264407644828395 |
[340] |
[60,173,79] |
0 |
hSpCas9 |
negative selection |
842595 |
27560242 |
27560265 |
9 |
+ |
26627737 |
GBM cells |
viability after 5 days |
TGCACTGCTACCTACTACAACGG |
C9orf72 |
ENSG00000147894 |
0.13600619153854998 |
[822] |
[416,552] |
2 |
hSpCas9 |
negative selection |
924909 |
27566888 |
27566911 |
9 |
- |
26627737 |
GBM cells |
viability after 5 days |
ATCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
0.7809166654872342 |
[190] |
[154,196] |
9 |
hSpCas9 |
negative selection |
924910 |
27560242 |
27560265 |
9 |
+ |
26627737 |
GBM cells |
viability after 13 days |
TGCACTGCTACCTACTACAACGG |
C9orf72 |
ENSG00000147894 |
0.22306405925034856 |
[822] |
[518,522] |
3 |
hSpCas9 |
negative selection |
1007224 |
27566888 |
27566911 |
9 |
- |
26627737 |
GBM cells |
viability after 13 days |
ATCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
0.8545155763985605 |
[190] |
[268,120] |
8 |
hSpCas9 |
negative selection |
1007225 |
27560242 |
27560265 |
9 |
+ |
26627737 |
GBM cells |
viability after 21 days |
TGCACTGCTACCTACTACAACGG |
C9orf72 |
ENSG00000147894 |
0.48199110299539094 |
[822] |
[624,623] |
5 |
hSpCas9 |
negative selection |
1089539 |
27566888 |
27566911 |
9 |
- |
26627737 |
GBM cells |
viability after 21 days |
ATCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
0.8465237396012737 |
[190] |
[207,166] |
8 |
hSpCas9 |
negative selection |
1089540 |
27560242 |
27560265 |
9 |
+ |
26627737 |
RPE1 |
viability after 9 days |
TGCACTGCTACCTACTACAACGG |
C9orf72 |
ENSG00000147894 |
-0.2291486234664606 |
[1998] |
[491,587] |
-2 |
hSpCas9 |
negative selection |
1171854 |
27566888 |
27566911 |
9 |
- |
26627737 |
RPE1 |
viability after 9 days |
ATCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
0.03866403287867071 |
[902] |
[292,286] |
0 |
hSpCas9 |
negative selection |
1171855 |
27560242 |
27560265 |
9 |
+ |
26627737 |
RPE1 |
viability after 12 days |
TGCACTGCTACCTACTACAACGG |
C9orf72 |
ENSG00000147894 |
0.1362484396954433 |
[1998] |
[598,580] |
0 |
hSpCas9 |
negative selection |
1254169 |
27566888 |
27566911 |
9 |
- |
26627737 |
RPE1 |
viability after 12 days |
ATCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
-0.020569520611843972 |
[902] |
[312,160] |
0 |
hSpCas9 |
negative selection |
1254170 |
27560242 |
27560265 |
9 |
+ |
26627737 |
RPE1 |
viability after 15 days |
TGCACTGCTACCTACTACAACGG |
C9orf72 |
ENSG00000147894 |
-0.11585816565759277 |
[1998] |
[530,512] |
0 |
hSpCas9 |
negative selection |
1336484 |
27566888 |
27566911 |
9 |
- |
26627737 |
RPE1 |
viability after 15 days |
ATCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
0.11955770573961161 |
[902] |
[276,277] |
0 |
hSpCas9 |
negative selection |
1336485 |
27560242 |
27560265 |
9 |
+ |
26627737 |
RPE1 |
viability after 18 days |
TGCACTGCTACCTACTACAACGG |
C9orf72 |
ENSG00000147894 |
0.1659166116157451 |
[1998] |
[596,613] |
1 |
hSpCas9 |
negative selection |
1418799 |
27566888 |
27566911 |
9 |
- |
26627737 |
RPE1 |
viability after 18 days |
ATCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
0.25685400796552593 |
[902] |
[412,160] |
1 |
hSpCas9 |
negative selection |
1418800 |
27560242 |
27560265 |
9 |
+ |
26627737 |
HeLa |
viability after 8 days |
TGCACTGCTACCTACTACAACGG |
C9orf72 |
ENSG00000147894 |
0.39767644316886286 |
[1152] |
[603,863,512] |
3 |
hSpCas9 |
negative selection |
1501114 |
27566888 |
27566911 |
9 |
- |
26627737 |
HeLa |
viability after 8 days |
ATCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
0.17457022740977196 |
[301] |
[141,233,72] |
1 |
hSpCas9 |
negative selection |
1501115 |
27560242 |
27560265 |
9 |
+ |
26627737 |
HeLa |
viability after 12 days |
TGCACTGCTACCTACTACAACGG |
C9orf72 |
ENSG00000147894 |
-0.11216418050364663 |
[1152] |
[420,468,428] |
-1 |
hSpCas9 |
negative selection |
1583429 |
27566888 |
27566911 |
9 |
- |
26627737 |
HeLa |
viability after 12 days |
ATCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
-0.2662261975018706 |
[301] |
[145,108,56] |
-2 |
hSpCas9 |
negative selection |
1583430 |
27560242 |
27560265 |
9 |
+ |
26627737 |
HeLa |
viability after 15 days |
TGCACTGCTACCTACTACAACGG |
C9orf72 |
ENSG00000147894 |
0.32919109005325153 |
[1152] |
[417,549,820] |
2 |
hSpCas9 |
negative selection |
1665744 |
27566888 |
27566911 |
9 |
- |
26627737 |
HeLa |
viability after 15 days |
ATCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
-0.8239322588553613 |
[301] |
[81,46,79] |
-6 |
hSpCas9 |
negative selection |
1665745 |
27560242 |
27560265 |
9 |
+ |
26627737 |
HeLa |
viability after 18 days |
TGCACTGCTACCTACTACAACGG |
C9orf72 |
ENSG00000147894 |
0.3399726322844723 |
[1152] |
[278,467,820] |
3 |
hSpCas9 |
negative selection |
1748059 |
27566888 |
27566911 |
9 |
- |
26627737 |
HeLa |
viability after 18 days |
ATCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
-0.8212981144293547 |
[301] |
[55,37,79] |
-6 |
hSpCas9 |
negative selection |
1748060 |
27560242 |
27560265 |
9 |
+ |
26627737 |
HCT116 |
viability after 6 days |
TGCACTGCTACCTACTACAACGG |
C9orf72 |
ENSG00000147894 |
0.5855797292565221 |
[1715] |
[797,187] |
3 |
hSpCas9 |
negative selection |
1830374 |
27566888 |
27566911 |
9 |
- |
26627737 |
HCT116 |
viability after 6 days |
ATCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
0.5809639245060596 |
[358] |
[222,7] |
3 |
hSpCas9 |
negative selection |
1830375 |
27560242 |
27560265 |
9 |
+ |
26627737 |
HCT116 |
viability after 8 days |
TGCACTGCTACCTACTACAACGG |
C9orf72 |
ENSG00000147894 |
-0.34137971071409723 |
[1143] |
[465,439,584] |
-4 |
hSpCas9 |
negative selection |
1912689 |
27566888 |
27566911 |
9 |
- |
26627737 |
HCT116 |
viability after 8 days |
ATCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
-0.12153918109884068 |
[283] |
[107,186,135] |
-1 |
hSpCas9 |
negative selection |
1912690 |
27560242 |
27560265 |
9 |
+ |
26627737 |
HCT116 |
viability after 9 days |
TGCACTGCTACCTACTACAACGG |
C9orf72 |
ENSG00000147894 |
0.5641659640541399 |
[1715] |
[796,582] |
4 |
hSpCas9 |
negative selection |
1995004 |
27566888 |
27566911 |
9 |
- |
26627737 |
HCT116 |
viability after 9 days |
ATCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
1.6352275121964959 |
[358] |
[318,280] |
8 |
hSpCas9 |
negative selection |
1995005 |
27560242 |
27560265 |
9 |
+ |
26627737 |
HCT116 |
viability after 12 days |
TGCACTGCTACCTACTACAACGG |
C9orf72 |
ENSG00000147894 |
-0.05236694024847233 |
[1143] |
[545,526,667] |
0 |
hSpCas9 |
negative selection |
2077319 |
27566888 |
27566911 |
9 |
- |
26627737 |
HCT116 |
viability after 12 days |
ATCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
-0.1442007306503355 |
[283] |
[95,151,160] |
-1 |
hSpCas9 |
negative selection |
2077320 |
27560242 |
27560265 |
9 |
+ |
26627737 |
HCT116 |
viability after 15 days |
TGCACTGCTACCTACTACAACGG |
C9orf72 |
ENSG00000147894 |
-0.1666151654294954 |
[1143] |
[653,411,696] |
-2 |
hSpCas9 |
negative selection |
2159634 |
27566888 |
27566911 |
9 |
- |
26627737 |
HCT116 |
viability after 15 days |
ATCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
0.3203101892593121 |
[283] |
[256,120,238] |
3 |
hSpCas9 |
negative selection |
2159635 |
27560242 |
27560265 |
9 |
+ |
26627737 |
HCT116 |
viability after 18 days |
TGCACTGCTACCTACTACAACGG |
C9orf72 |
ENSG00000147894 |
-0.06686341951744024 |
[1143] |
[516,378,705] |
0 |
hSpCas9 |
negative selection |
2241949 |
27566888 |
27566911 |
9 |
- |
26627737 |
HCT116 |
viability after 18 days |
ATCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
0.22914955526253436 |
[283] |
[106,189,184] |
2 |
hSpCas9 |
negative selection |
2241950 |
27566951 |
27566974 |
9 |
- |
24336569 |
HL60 |
viability |
GAACAGGTACTTCTCAGTGATGG |
C9orf72 |
ENSG00000147894 |
0.2784044118405512 |
[682] |
[1752] |
2 |
hSpCas9 |
negative selection |
2253981 |
27566960 |
27566983 |
9 |
+ |
24336569 |
HL60 |
viability |
AGAAGTACCTGTTCTGTCTTTGG |
C9orf72 |
ENSG00000147894 |
0.8679348381342669 |
[514] |
[1988] |
7 |
hSpCas9 |
negative selection |
2253982 |
27566967 |
27566990 |
9 |
- |
24336569 |
HL60 |
viability |
TTGGGCTCCAAAGACAGAACAGG |
C9orf72 |
ENSG00000147894 |
-0.03706998127044292 |
[399] |
[824] |
0 |
hSpCas9 |
negative selection |
2253983 |
27566984 |
27567007 |
9 |
+ |
24336569 |
HL60 |
viability |
GCCCAAATGTGCCTTACTCTAGG |
C9orf72 |
ENSG00000147894 |
1.5626257050545065 |
[246] |
[1543] |
9 |
hSpCas9 |
negative selection |
2253984 |
27566995 |
27567018 |
9 |
- |
24336569 |
HL60 |
viability |
ATATTCTTGGTCCTAGAGTAAGG |
C9orf72 |
ENSG00000147894 |
-0.1592192581433416 |
[485] |
[920] |
-1 |
hSpCas9 |
negative selection |
2253985 |
27567008 |
27567031 |
9 |
- |
24336569 |
HL60 |
viability |
GCTTACTGGGACAATATTCTTGG |
C9orf72 |
ENSG00000147894 |
-0.2509349245006738 |
[793] |
[1411] |
-2 |
hSpCas9 |
negative selection |
2253986 |
27567059 |
27567082 |
9 |
- |
24336569 |
HL60 |
viability |
AAGACAGAGATTGCTTTAAGTGG |
C9orf72 |
ENSG00000147894 |
-0.15173517967461606 |
[609] |
[1161] |
-1 |
hSpCas9 |
negative selection |
2253987 |
27567071 |
27567094 |
9 |
+ |
24336569 |
HL60 |
viability |
ATCTCTGTCTTGGCAACAGCTGG |
C9orf72 |
ENSG00000147894 |
0.03401311679103958 |
[215] |
[467] |
0 |
hSpCas9 |
negative selection |
2253988 |
27567077 |
27567100 |
9 |
+ |
24336569 |
HL60 |
viability |
GTCTTGGCAACAGCTGGAGATGG |
C9orf72 |
ENSG00000147894 |
0.48693930821885045 |
[700] |
[2078] |
4 |
hSpCas9 |
negative selection |
2253989 |
27567083 |
27567106 |
9 |
+ |
24336569 |
HL60 |
viability |
GCAACAGCTGGAGATGGCGGTGG |
C9orf72 |
ENSG00000147894 |
-0.5333915869824537 |
[778] |
[1138] |
-5 |
hSpCas9 |
negative selection |
2253990 |
27566951 |
27566974 |
9 |
- |
24336569 |
KBM7 |
viability |
GAACAGGTACTTCTCAGTGATGG |
C9orf72 |
ENSG00000147894 |
0.7076990289290285 |
[560] |
[2498] |
6 |
hSpCas9 |
negative selection |
2321158 |
27566960 |
27566983 |
9 |
+ |
24336569 |
KBM7 |
viability |
AGAAGTACCTGTTCTGTCTTTGG |
C9orf72 |
ENSG00000147894 |
0.3713451142208586 |
[620] |
[2190] |
3 |
hSpCas9 |
negative selection |
2321159 |
27566967 |
27566990 |
9 |
- |
24336569 |
KBM7 |
viability |
TTGGGCTCCAAAGACAGAACAGG |
C9orf72 |
ENSG00000147894 |
-0.1587648514597379 |
[378] |
[925] |
-1 |
hSpCas9 |
negative selection |
2321160 |
27566984 |
27567007 |
9 |
+ |
24336569 |
KBM7 |
viability |
GCCCAAATGTGCCTTACTCTAGG |
C9orf72 |
ENSG00000147894 |
0.054688619998672514 |
[364] |
[1033] |
0 |
hSpCas9 |
negative selection |
2321161 |
27566995 |
27567018 |
9 |
- |
24336569 |
KBM7 |
viability |
ATATTCTTGGTCCTAGAGTAAGG |
C9orf72 |
ENSG00000147894 |
-0.3011521574755033 |
[336] |
[745] |
-3 |
hSpCas9 |
negative selection |
2321162 |
27567008 |
27567031 |
9 |
- |
24336569 |
KBM7 |
viability |
GCTTACTGGGACAATATTCTTGG |
C9orf72 |
ENSG00000147894 |
0.3839330441034172 |
[532] |
[1896] |
3 |
hSpCas9 |
negative selection |
2321163 |
27567059 |
27567082 |
9 |
- |
24336569 |
KBM7 |
viability |
AAGACAGAGATTGCTTTAAGTGG |
C9orf72 |
ENSG00000147894 |
0.46077235618791595 |
[328] |
[1234] |
4 |
hSpCas9 |
negative selection |
2321164 |
27567071 |
27567094 |
9 |
+ |
24336569 |
KBM7 |
viability |
ATCTCTGTCTTGGCAACAGCTGG |
C9orf72 |
ENSG00000147894 |
-0.1651794658481578 |
[221] |
[539] |
-1 |
hSpCas9 |
negative selection |
2321165 |
27567077 |
27567100 |
9 |
+ |
24336569 |
KBM7 |
viability |
GTCTTGGCAACAGCTGGAGATGG |
C9orf72 |
ENSG00000147894 |
-0.15195686421480947 |
[641] |
[1575] |
-1 |
hSpCas9 |
negative selection |
2321166 |
27567083 |
27567106 |
9 |
+ |
24336569 |
KBM7 |
viability |
GCAACAGCTGGAGATGGCGGTGG |
C9orf72 |
ENSG00000147894 |
-0.7849073847299903 |
[517] |
[819] |
-6 |
hSpCas9 |
negative selection |
2321167 |
27548855 |
27548878 |
9 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
TTTTTTTTTGAGACGGAGTCTAG |
C9orf72 |
ENSG00000147894 |
-0.0033727294007129816 |
[93,134] |
[41,5] |
0 |
dCas9-VP64 |
positive selection |
2412607 |
27573567 |
27573590 |
9 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
CCAGAGCTTGCTACAGGCTGCGG |
C9orf72 |
ENSG00000147894 |
1.9963086226988063 |
[0,0] |
[0,0] |
7 |
dCas9-VP64 |
positive selection |
2449911 |
27573645 |
27573668 |
9 |
- |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
GCTCTCACAGTACTCGCTGAGGG |
C9orf72 |
ENSG00000147894 |
3.965554907624633 |
[23,53] |
[250,11] |
9 |
dCas9-VP64 |
positive selection |
2449912 |
27573593 |
27573616 |
9 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
TTTCCCTCCTTGTTTTCTTCTGG |
C9orf72 |
ENSG00000147894 |
-1.4181074223642396 |
[152,30] |
[10,2] |
-7 |
dCas9-VP64 |
positive selection |
2449913 |
27548855 |
27548878 |
9 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
TTTTTTTTTGAGACGGAGTCTAG |
C9orf72 |
ENSG00000147894 |
-0.5948176551250917 |
[72,353] |
[48,41] |
-6 |
dCas9-VP64 |
positive selection |
2507862 |
27573567 |
27573590 |
9 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
CCAGAGCTTGCTACAGGCTGCGG |
C9orf72 |
ENSG00000147894 |
1.2413939336927056 |
[30,54] |
[12,50] |
7 |
dCas9-VP64 |
positive selection |
2545166 |
27573645 |
27573668 |
9 |
- |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
GCTCTCACAGTACTCGCTGAGGG |
C9orf72 |
ENSG00000147894 |
-0.0076811711214690975 |
[147,81] |
[37,35] |
0 |
dCas9-VP64 |
positive selection |
2545167 |
27573593 |
27573616 |
9 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
TTTCCCTCCTTGTTTTCTTCTGG |
C9orf72 |
ENSG00000147894 |
-0.28902326799491007 |
[195,122] |
[54,30] |
-3 |
dCas9-VP64 |
positive selection |
2545168 |
27566915 |
27566938 |
9 |
- |
27453484 |
HT29 |
resistance to T3SS1-dependent cytotoxicity |
CTTGCCAACCACACTCTAAATGG |
C9orf72 |
ENSG00000147894 |
0.255956294929369 |
[3,3] |
[3,3] |
5 |
hSpCas9 |
positive selection |
2975727 |
27566951 |
27566974 |
9 |
- |
27453484 |
HT29 |
resistance to T3SS1-dependent cytotoxicity |
GAACAGGTACTTCTCAGTGATGG |
C9orf72 |
ENSG00000147894 |
0.2607636452137225 |
[3,3] |
[4,3] |
5 |
hSpCas9 |
positive selection |
2975728 |
27567084 |
27567107 |
9 |
+ |
27453484 |
HT29 |
resistance to T3SS1-dependent cytotoxicity |
GCAACAGCTGGAGATGGCGGTGG |
C9orf72 |
ENSG00000147894 |
0.6998667259293313 |
[2,2] |
[3,3] |
9 |
hSpCas9 |
positive selection |
2975729 |
27566908 |
27566931 |
9 |
+ |
27453484 |
HT29 |
resistance to T3SS1-dependent cytotoxicity |
GGATTTCTCCATTTAGAGTGTGG |
C9orf72 |
ENSG00000147894 |
0.007986965469765267 |
[3,4] |
[3,2] |
0 |
hSpCas9 |
positive selection |
2975730 |
27566915 |
27566938 |
9 |
- |
27453484 |
HT29 |
resistance to T3SS2-dependent cytotoxicity |
CTTGCCAACCACACTCTAAATGG |
C9orf72 |
ENSG00000147894 |
-0.13510626385842492 |
[3,3] |
[3,0] |
-2 |
hSpCas9 |
positive selection |
3043585 |
27566951 |
27566974 |
9 |
- |
27453484 |
HT29 |
resistance to T3SS2-dependent cytotoxicity |
GAACAGGTACTTCTCAGTGATGG |
C9orf72 |
ENSG00000147894 |
0.5259019722112573 |
[3,3] |
[2,4] |
8 |
hSpCas9 |
positive selection |
3043586 |
27567084 |
27567107 |
9 |
+ |
27453484 |
HT29 |
resistance to T3SS2-dependent cytotoxicity |
GCAACAGCTGGAGATGGCGGTGG |
C9orf72 |
ENSG00000147894 |
0.09851308660018947 |
[2,2] |
[3,1] |
1 |
hSpCas9 |
positive selection |
3043587 |
27566908 |
27566931 |
9 |
+ |
27453484 |
HT29 |
resistance to T3SS2-dependent cytotoxicity |
GGATTTCTCCATTTAGAGTGTGG |
C9orf72 |
ENSG00000147894 |
0.5342025459486114 |
[3,3] |
[4,3] |
8 |
hSpCas9 |
positive selection |
3043588 |
27562448 |
27562471 |
|
- |
24336571 |
A375 |
resistance to PLX after 7 days |
AGTATTATTCCAATGCTTACTGG |
C9orf72 |
ENSG00000147894 |
-0.03939768131438898 |
[16,17] |
[16,16] |
-1 |
hSpCas9 |
positive selection |
3160015 |
27562415 |
27562438 |
|
+ |
24336571 |
A375 |
resistance to PLX after 7 days |
GATGAAAGCAGTTCCATTACAGG |
C9orf72 |
ENSG00000147894 |
-0.2737854827195516 |
[21,23] |
[20,16] |
-7 |
hSpCas9 |
positive selection |
3160016 |
27567029 |
27567052 |
|
+ |
24336571 |
A375 |
resistance to PLX after 7 days |
GCAAAAGTAGCTGCTAATAAAGG |
C9orf72 |
ENSG00000147894 |
-0.004527874126768333 |
[9,12] |
[9,12] |
0 |
hSpCas9 |
positive selection |
3160017 |
27567022 |
27567045 |
|
- |
24336571 |
A375 |
resistance to PLX after 7 days |
TAGCAGCTACTTTTGCTTACTGG |
C9orf72 |
ENSG00000147894 |
0.0525549171054438 |
[34,38] |
[35,39] |
2 |
hSpCas9 |
positive selection |
3160018 |
27562448 |
27562471 |
|
- |
24336571 |
A375 |
resistance to PLX after 14 days |
AGTATTATTCCAATGCTTACTGG |
C9orf72 |
ENSG00000147894 |
-0.34049861448201724 |
[14,15] |
[4,5] |
-4 |
hSpCas9 |
positive selection |
3217808 |
27562415 |
27562438 |
|
+ |
24336571 |
A375 |
resistance to PLX after 14 days |
GATGAAAGCAGTTCCATTACAGG |
C9orf72 |
ENSG00000147894 |
-0.585964673137024 |
[19,29] |
[7,6] |
-7 |
hSpCas9 |
positive selection |
3217809 |
27567029 |
27567052 |
|
+ |
24336571 |
A375 |
resistance to PLX after 14 days |
GCAAAAGTAGCTGCTAATAAAGG |
C9orf72 |
ENSG00000147894 |
-0.542511779357279 |
[8,13] |
[3,2] |
-6 |
hSpCas9 |
positive selection |
3217810 |
27567022 |
27567045 |
|
- |
24336571 |
A375 |
resistance to PLX after 14 days |
TAGCAGCTACTTTTGCTTACTGG |
C9orf72 |
ENSG00000147894 |
-0.7630511137987643 |
[44,40] |
[10,11] |
-8 |
hSpCas9 |
positive selection |
3217811 |
27562448 |
27562471 |
|
- |
24336571 |
A375 |
viability after 7 days |
AGTATTATTCCAATGCTTACTGG |
C9orf72 |
ENSG00000147894 |
-0.7560048264920332 |
[31] |
[16,17] |
-8 |
hSpCas9 |
negative selection |
3275601 |
27562415 |
27562438 |
|
+ |
24336571 |
A375 |
viability after 7 days |
GATGAAAGCAGTTCCATTACAGG |
C9orf72 |
ENSG00000147894 |
0.498845418599395 |
[16] |
[21,23] |
7 |
hSpCas9 |
negative selection |
3275602 |
27567029 |
27567052 |
|
+ |
24336571 |
A375 |
viability after 7 days |
GCAAAAGTAGCTGCTAATAAAGG |
C9orf72 |
ENSG00000147894 |
0.03345489523355091 |
[11] |
[9,12] |
0 |
hSpCas9 |
negative selection |
3275603 |
27567022 |
27567045 |
|
- |
24336571 |
A375 |
viability after 7 days |
TAGCAGCTACTTTTGCTTACTGG |
C9orf72 |
ENSG00000147894 |
0.24931428474218942 |
[32] |
[34,38] |
4 |
hSpCas9 |
negative selection |
3275604 |
27562448 |
27562471 |
|
- |
24336571 |
A375 |
viability after 14 days |
AGTATTATTCCAATGCTTACTGG |
C9orf72 |
ENSG00000147894 |
-0.9237000811525663 |
[31] |
[14,15] |
-8 |
hSpCas9 |
negative selection |
3333394 |
27562415 |
27562438 |
|
+ |
24336571 |
A375 |
viability after 14 days |
GATGAAAGCAGTTCCATTACAGG |
C9orf72 |
ENSG00000147894 |
0.603753558481049 |
[16] |
[19,29] |
7 |
hSpCas9 |
negative selection |
3333395 |
27567029 |
27567052 |
|
+ |
24336571 |
A375 |
viability after 14 days |
GCAAAAGTAGCTGCTAATAAAGG |
C9orf72 |
ENSG00000147894 |
0.07715606377196314 |
[11] |
[8,13] |
1 |
hSpCas9 |
negative selection |
3333396 |
27567022 |
27567045 |
|
- |
24336571 |
A375 |
viability after 14 days |
TAGCAGCTACTTTTGCTTACTGG |
C9orf72 |
ENSG00000147894 |
0.4870906048686876 |
[32] |
[44,40] |
6 |
hSpCas9 |
negative selection |
3333397 |
27566789 |
27566812 |
9 |
- |
27383988 |
293T |
resistance to West Nile virus (flavivirus) |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
1.7563718493468763 |
[157,158] |
[0,5] |
7 |
hSpCas9 |
positive selection |
3340609 |
27558490 |
27558513 |
9 |
- |
27383988 |
293T |
resistance to West Nile virus (flavivirus) |
CTTTGTACAAGGCCTGCTAAAGG |
C9orf72 |
ENSG00000147894 |
-0.6177053450219547 |
[197,271] |
[0,0] |
-4 |
hSpCas9 |
positive selection |
3340610 |
27562448 |
27562471 |
9 |
- |
27383988 |
293T |
resistance to West Nile virus (flavivirus) |
AGTATTATTCCAATGCTTACTGG |
C9orf72 |
ENSG00000147894 |
-0.9390388553881065 |
[266,319] |
[0,0] |
-6 |
hSpCas9 |
positive selection |
3340611 |
27562439 |
27562462 |
9 |
+ |
27383988 |
293T |
resistance to West Nile virus (flavivirus) |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
-1.2934205739374083 |
[374,374] |
[0,0] |
-8 |
hSpCas9 |
positive selection |
3359858 |
27566886 |
27566909 |
9 |
+ |
27383988 |
293T |
resistance to West Nile virus (flavivirus) |
CACCACTCTCTGCATTTCGAAGG |
C9orf72 |
ENSG00000147894 |
1.529405756882636 |
[52,52] |
[0,0] |
6 |
hSpCas9 |
positive selection |
3359859 |
27558536 |
27558559 |
9 |
+ |
27383988 |
293T |
resistance to West Nile virus (flavivirus) |
TGATTCTGCTTCACATAACCTGG |
C9orf72 |
ENSG00000147894 |
0.06256935702358724 |
[585,585] |
[3,3] |
0 |
hSpCas9 |
positive selection |
3359860 |
27566915 |
27566938 |
9 |
- |
26780180 |
HT29 |
viability (Avana library 4 designs) |
CTTGCCAACCACACTCTAAATGG |
C9orf72 |
ENSG00000147894 |
1.24902861832996 |
[] |
[] |
5 |
hSpCas9 |
negative selection |
3412000 |
27566951 |
27566974 |
9 |
- |
26780180 |
HT29 |
viability (Avana library 4 designs) |
GAACAGGTACTTCTCAGTGATGG |
C9orf72 |
ENSG00000147894 |
0.0973502668787275 |
[] |
[] |
0 |
hSpCas9 |
negative selection |
3412001 |
27567083 |
27567106 |
9 |
+ |
26780180 |
HT29 |
viability (Avana library 4 designs) |
GCAACAGCTGGAGATGGCGGTGG |
C9orf72 |
ENSG00000147894 |
0.380391154265922 |
[] |
[] |
1 |
hSpCas9 |
negative selection |
3412002 |
27566907 |
27566930 |
9 |
+ |
26780180 |
HT29 |
viability (Avana library 4 designs) |
GGATTTCTCCATTTAGAGTGTGG |
C9orf72 |
ENSG00000147894 |
-0.117433868020475 |
[] |
[] |
-2 |
hSpCas9 |
negative selection |
3412003 |
27567083 |
27567106 |
9 |
+ |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
GCAACAGCTGGAGATGGCGGTGG |
C9orf72 |
ENSG00000147894 |
-2.89112924733169 |
[] |
[] |
-3 |
hSpCas9 |
negative selection |
3487247 |
27566951 |
27566974 |
9 |
- |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
GAACAGGTACTTCTCAGTGATGG |
C9orf72 |
ENSG00000147894 |
0.677005554013092 |
[] |
[] |
0 |
hSpCas9 |
negative selection |
3487248 |
27566907 |
27566930 |
9 |
+ |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
GGATTTCTCCATTTAGAGTGTGG |
C9orf72 |
ENSG00000147894 |
-1.2113702012985 |
[] |
[] |
-1 |
hSpCas9 |
negative selection |
3487249 |
27566915 |
27566938 |
9 |
- |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
CTTGCCAACCACACTCTAAATGG |
C9orf72 |
ENSG00000147894 |
-11.7608966131854 |
[] |
[] |
-8 |
hSpCas9 |
negative selection |
3487250 |
27567084 |
27567107 |
9 |
+ |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
CAACAGCTGGAGATGGCGGTGGG |
C9orf72 |
ENSG00000147894 |
3.7467748054444 |
[] |
[] |
6 |
hSpCas9 |
negative selection |
3487251 |
27566995 |
27567018 |
9 |
- |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
ATATTCTTGGTCCTAGAGTAAGG |
C9orf72 |
ENSG00000147894 |
-2.84795063224877 |
[] |
[] |
-3 |
hSpCas9 |
negative selection |
3487252 |
27567083 |
27567106 |
9 |
+ |
26780180 |
A375 |
viability (Avana lentiGuide) |
GCAACAGCTGGAGATGGCGGTGG |
C9orf72 |
ENSG00000147894 |
15.069450004961 |
[] |
[] |
8 |
hSpCas9 |
negative selection |
3595906 |
27566951 |
27566974 |
9 |
- |
26780180 |
A375 |
viability (Avana lentiGuide) |
GAACAGGTACTTCTCAGTGATGG |
C9orf72 |
ENSG00000147894 |
0.1985557005384 |
[] |
[] |
0 |
hSpCas9 |
negative selection |
3595907 |
27566907 |
27566930 |
9 |
+ |
26780180 |
A375 |
viability (Avana lentiGuide) |
GGATTTCTCCATTTAGAGTGTGG |
C9orf72 |
ENSG00000147894 |
-3.97702370837494 |
[] |
[] |
-7 |
hSpCas9 |
negative selection |
3595908 |
27566915 |
27566938 |
9 |
- |
26780180 |
A375 |
viability (Avana lentiGuide) |
CTTGCCAACCACACTCTAAATGG |
C9orf72 |
ENSG00000147894 |
-7.33721155259889 |
[] |
[] |
-9 |
hSpCas9 |
negative selection |
3595909 |
27567084 |
27567107 |
9 |
+ |
26780180 |
A375 |
viability (Avana lentiGuide) |
CAACAGCTGGAGATGGCGGTGGG |
C9orf72 |
ENSG00000147894 |
1.91727740213629 |
[] |
[] |
2 |
hSpCas9 |
negative selection |
3595910 |
27566995 |
27567018 |
9 |
- |
26780180 |
A375 |
viability (Avana lentiGuide) |
ATATTCTTGGTCCTAGAGTAAGG |
C9orf72 |
ENSG00000147894 |
4.32008996640598 |
[] |
[] |
4 |
hSpCas9 |
negative selection |
3595911 |
27567083 |
27567106 |
9 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
GCAACAGCTGGAGATGGCGGTGG |
C9orf72 |
ENSG00000147894 |
-0.8943225645179943 |
[4] |
[2,1] |
-8 |
hSpCas9 |
positive selection |
3704565 |
27566951 |
27566974 |
9 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
GAACAGGTACTTCTCAGTGATGG |
C9orf72 |
ENSG00000147894 |
-0.135255351849971 |
[5] |
[5,3] |
-2 |
hSpCas9 |
positive selection |
3704566 |
27566907 |
27566930 |
9 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
GGATTTCTCCATTTAGAGTGTGG |
C9orf72 |
ENSG00000147894 |
-0.24628375821143533 |
[5] |
[4,4] |
-4 |
hSpCas9 |
positive selection |
3704567 |
27566915 |
27566938 |
9 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
CTTGCCAACCACACTCTAAATGG |
C9orf72 |
ENSG00000147894 |
-0.29679300144169396 |
[4] |
[4,3] |
-4 |
hSpCas9 |
positive selection |
3704568 |
27567084 |
27567107 |
9 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
CAACAGCTGGAGATGGCGGTGGG |
C9orf72 |
ENSG00000147894 |
0.3715076840432119 |
[3] |
[4,4] |
9 |
hSpCas9 |
positive selection |
3704569 |
27566995 |
27567018 |
9 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
ATATTCTTGGTCCTAGAGTAAGG |
C9orf72 |
ENSG00000147894 |
-0.13823784694717806 |
[7] |
[6,6] |
-2 |
hSpCas9 |
positive selection |
3704570 |
27567083 |
27567106 |
9 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
GCAACAGCTGGAGATGGCGGTGG |
C9orf72 |
ENSG00000147894 |
-0.4060398873606433 |
[4] |
[3,1] |
-5 |
hSpCas9 |
positive selection |
3813172 |
27566951 |
27566974 |
9 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
GAACAGGTACTTCTCAGTGATGG |
C9orf72 |
ENSG00000147894 |
0.10417462908310335 |
[5] |
[5,4] |
2 |
hSpCas9 |
positive selection |
3813173 |
27566907 |
27566930 |
9 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
GGATTTCTCCATTTAGAGTGTGG |
C9orf72 |
ENSG00000147894 |
0.2286632692353602 |
[5] |
[4,5] |
6 |
hSpCas9 |
positive selection |
3813174 |
27566915 |
27566938 |
9 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
CTTGCCAACCACACTCTAAATGG |
C9orf72 |
ENSG00000147894 |
0.32362607328190435 |
[5] |
[6,5] |
8 |
hSpCas9 |
positive selection |
3813175 |
27567084 |
27567107 |
9 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
CAACAGCTGGAGATGGCGGTGGG |
C9orf72 |
ENSG00000147894 |
-0.09627266092188766 |
[4] |
[2,4] |
-1 |
hSpCas9 |
positive selection |
3813176 |
27566995 |
27567018 |
9 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
ATATTCTTGGTCCTAGAGTAAGG |
C9orf72 |
ENSG00000147894 |
0.07714335026152153 |
[5] |
[5,4] |
1 |
hSpCas9 |
positive selection |
3813177 |
27566789 |
27566812 |
9 |
- |
26780180 |
A375 |
viability |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.592176815626485 |
[] |
[] |
1 |
hSpCas9 |
negative selection |
3921473 |
27562448 |
27562471 |
9 |
- |
26780180 |
A375 |
viability |
AGTATTATTCCAATGCTTACTGG |
C9orf72 |
ENSG00000147894 |
0.906036056045578 |
[] |
[] |
4 |
hSpCas9 |
negative selection |
3921474 |
27562439 |
27562462 |
9 |
+ |
26780180 |
A375 |
viability |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
1.15441985207473 |
[] |
[] |
6 |
hSpCas9 |
negative selection |
3921475 |
27566886 |
27566909 |
9 |
+ |
26780180 |
A375 |
viability |
CACCACTCTCTGCATTTCGAAGG |
C9orf72 |
ENSG00000147894 |
0.741886973407124 |
[] |
[] |
2 |
hSpCas9 |
negative selection |
3921476 |
27558490 |
27558513 |
9 |
- |
26780180 |
A375 |
viability |
CTTTGTACAAGGCCTGCTAAAGG |
C9orf72 |
ENSG00000147894 |
1.56329502041387 |
[] |
[] |
8 |
hSpCas9 |
negative selection |
3921477 |
27558536 |
27558559 |
9 |
+ |
26780180 |
A375 |
viability |
TGATTCTGCTTCACATAACCTGG |
C9orf72 |
ENSG00000147894 |
1.39072025688298 |
[] |
[] |
7 |
hSpCas9 |
negative selection |
3921478 |
27566789 |
27566812 |
9 |
- |
26780180 |
HT29 |
viability (GeCKOv2 library) |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.379385982276501 |
[] |
[] |
1 |
hSpCas9 |
negative selection |
4029439 |
27562448 |
27562471 |
9 |
- |
26780180 |
HT29 |
viability (GeCKOv2 library) |
AGTATTATTCCAATGCTTACTGG |
C9orf72 |
ENSG00000147894 |
0.561450094201157 |
[] |
[] |
2 |
hSpCas9 |
negative selection |
4029440 |
27562439 |
27562462 |
9 |
+ |
26780180 |
HT29 |
viability (GeCKOv2 library) |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
1.30205883830963 |
[] |
[] |
6 |
hSpCas9 |
negative selection |
4029441 |
27566886 |
27566909 |
9 |
+ |
26780180 |
HT29 |
viability (GeCKOv2 library) |
CACCACTCTCTGCATTTCGAAGG |
C9orf72 |
ENSG00000147894 |
0.854955749602733 |
[] |
[] |
3 |
hSpCas9 |
negative selection |
4029442 |
27558490 |
27558513 |
9 |
- |
26780180 |
HT29 |
viability (GeCKOv2 library) |
CTTTGTACAAGGCCTGCTAAAGG |
C9orf72 |
ENSG00000147894 |
1.30453269003184 |
[] |
[] |
6 |
hSpCas9 |
negative selection |
4029443 |
27558536 |
27558559 |
9 |
+ |
26780180 |
HT29 |
viability (GeCKOv2 library) |
TGATTCTGCTTCACATAACCTGG |
C9orf72 |
ENSG00000147894 |
0.0231032316295986 |
[] |
[] |
0 |
hSpCas9 |
negative selection |
4029444 |
27562448 |
27562471 |
9 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiCRISPRv1) |
AGTATTATTCCAATGCTTACTGG |
C9orf72 |
ENSG00000147894 |
-0.25402896313325996 |
[4] |
[1,2] |
-6 |
hSpCas9 |
positive selection |
4188060 |
27562415 |
27562438 |
9 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiCRISPRv1) |
GATGAAAGCAGTTCCATTACAGG |
C9orf72 |
ENSG00000147894 |
0.06851321469142682 |
[4] |
[3,2] |
1 |
hSpCas9 |
positive selection |
4188061 |
27567029 |
27567052 |
9 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiCRISPRv1) |
GCAAAAGTAGCTGCTAATAAAGG |
C9orf72 |
ENSG00000147894 |
-0.2506556924062091 |
[4] |
[2,1] |
-6 |
hSpCas9 |
positive selection |
4188062 |
27567022 |
27567045 |
9 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiCRISPRv1) |
TAGCAGCTACTTTTGCTTACTGG |
C9orf72 |
ENSG00000147894 |
0.022046135419612756 |
[5] |
[4,3] |
0 |
hSpCas9 |
positive selection |
4188063 |
27562448 |
27562471 |
9 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiGuide) |
AGTATTATTCCAATGCTTACTGG |
C9orf72 |
ENSG00000147894 |
1.7542511944849903 |
[5] |
[4,4,4,12] |
9 |
hSpCas9 |
positive selection |
4252082 |
27562415 |
27562438 |
9 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiGuide) |
GATGAAAGCAGTTCCATTACAGG |
C9orf72 |
ENSG00000147894 |
-0.29997308061537686 |
[4] |
[1,0,2,0] |
-4 |
hSpCas9 |
positive selection |
4252083 |
27567029 |
27567052 |
9 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiGuide) |
GCAAAAGTAGCTGCTAATAAAGG |
C9orf72 |
ENSG00000147894 |
-0.06476156252640328 |
[4] |
[0,2,3,0] |
-1 |
hSpCas9 |
positive selection |
4252084 |
27567022 |
27567045 |
9 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiGuide) |
TAGCAGCTACTTTTGCTTACTGG |
C9orf72 |
ENSG00000147894 |
0.23629193640668977 |
[4] |
[2,5,1,0] |
1 |
hSpCas9 |
positive selection |
4252085 |
27566789 |
27566812 |
9 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.13620863672597947 |
[3] |
[3,2] |
2 |
hSpCas9 |
positive selection |
4260458 |
27558490 |
27558513 |
9 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
CTTTGTACAAGGCCTGCTAAAGG |
C9orf72 |
ENSG00000147894 |
-0.2280847539747493 |
[3] |
[2,1] |
-4 |
hSpCas9 |
positive selection |
4260459 |
27562448 |
27562471 |
9 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
AGTATTATTCCAATGCTTACTGG |
C9orf72 |
ENSG00000147894 |
0.16310708633694943 |
[4] |
[4,2] |
3 |
hSpCas9 |
positive selection |
4260460 |
27562439 |
27562462 |
9 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
0.16549621417070767 |
[3] |
[3,2] |
3 |
hSpCas9 |
positive selection |
4324739 |
27566886 |
27566909 |
9 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
CACCACTCTCTGCATTTCGAAGG |
C9orf72 |
ENSG00000147894 |
-0.2236232551796989 |
[1] |
[1,0] |
-4 |
hSpCas9 |
positive selection |
4324740 |
27558536 |
27558559 |
9 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
TGATTCTGCTTCACATAACCTGG |
C9orf72 |
ENSG00000147894 |
0.1764231983373445 |
[3] |
[3,3] |
3 |
hSpCas9 |
positive selection |
4324741 |
27566728 |
27566750 |
9 |
+ |
27760321 |
OCIAML3 |
viability |
ACACACTCTATGAAGTGGGAGG |
C9orf72 |
ENSG00000147894 |
0.31218589499653704 |
[440,316] |
[352,378] |
3 |
hSpCas9 |
negative selection |
4384903 |
27566789 |
27566811 |
9 |
- |
27760321 |
OCIAML3 |
viability |
ATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.24900719638276564 |
[438,373] |
[297,478] |
3 |
hSpCas9 |
negative selection |
4384904 |
27566812 |
27566834 |
9 |
- |
27760321 |
OCIAML3 |
viability |
ATTAATCTTTGATGGAAACTGG |
C9orf72 |
ENSG00000147894 |
-0.8076958445029865 |
[29,26] |
[0,27] |
-6 |
hSpCas9 |
negative selection |
4384905 |
27566888 |
27566910 |
9 |
- |
27760321 |
OCIAML3 |
viability |
TCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
2.2944509633344703 |
[4,1] |
[12,12] |
9 |
hSpCas9 |
negative selection |
4384906 |
27566915 |
27566937 |
9 |
- |
27760321 |
OCIAML3 |
viability |
TTGCCAACCACACTCTAAATGG |
C9orf72 |
ENSG00000147894 |
0.5316212961142234 |
[195,163] |
[193,213] |
6 |
hSpCas9 |
negative selection |
4384907 |
27566728 |
27566750 |
9 |
+ |
27760321 |
OCIAML2 |
viability |
ACACACTCTATGAAGTGGGAGG |
C9orf72 |
ENSG00000147894 |
0.8285299663207726 |
[440,316] |
[399,721] |
9 |
hSpCas9 |
negative selection |
4468366 |
27566789 |
27566811 |
9 |
- |
27760321 |
OCIAML2 |
viability |
ATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.23753484462337496 |
[438,373] |
[344,440] |
3 |
hSpCas9 |
negative selection |
4468367 |
27566812 |
27566834 |
9 |
- |
27760321 |
OCIAML2 |
viability |
ATTAATCTTTGATGGAAACTGG |
C9orf72 |
ENSG00000147894 |
-0.21895773882517044 |
[29,26] |
[8,33] |
-3 |
hSpCas9 |
negative selection |
4468368 |
27566888 |
27566910 |
9 |
- |
27760321 |
OCIAML2 |
viability |
TCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
-1.454734120071671 |
[4,1] |
[0,0] |
-8 |
hSpCas9 |
negative selection |
4468369 |
27566915 |
27566937 |
9 |
- |
27760321 |
OCIAML2 |
viability |
TTGCCAACCACACTCTAAATGG |
C9orf72 |
ENSG00000147894 |
0.49992452535959486 |
[195,163] |
[170,249] |
6 |
hSpCas9 |
negative selection |
4468370 |
27566728 |
27566750 |
9 |
+ |
27760321 |
MV411 |
viability |
ACACACTCTATGAAGTGGGAGG |
C9orf72 |
ENSG00000147894 |
1.8264199164735204 |
[440,316] |
[1124,506] |
9 |
hSpCas9 |
negative selection |
4551829 |
27566789 |
27566811 |
9 |
- |
27760321 |
MV411 |
viability |
ATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.02657894148162239 |
[438,373] |
[201,377] |
0 |
hSpCas9 |
negative selection |
4551830 |
27566812 |
27566834 |
9 |
- |
27760321 |
MV411 |
viability |
ATTAATCTTTGATGGAAACTGG |
C9orf72 |
ENSG00000147894 |
-1.7462032637024425 |
[29,26] |
[5,4] |
-8 |
hSpCas9 |
negative selection |
4551831 |
27566888 |
27566910 |
9 |
- |
27760321 |
MV411 |
viability |
TCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
1.8736629626554864 |
[4,1] |
[0,18] |
9 |
hSpCas9 |
negative selection |
4551832 |
27566915 |
27566937 |
9 |
- |
27760321 |
MV411 |
viability |
TTGCCAACCACACTCTAAATGG |
C9orf72 |
ENSG00000147894 |
0.11918545384458823 |
[195,163] |
[0,319] |
0 |
hSpCas9 |
negative selection |
4551833 |
27566728 |
27566750 |
9 |
+ |
27760321 |
HL60 |
viability |
ACACACTCTATGAAGTGGGAGG |
C9orf72 |
ENSG00000147894 |
1.7385709442472166 |
[440,316] |
[1292,735] |
9 |
hSpCas9 |
negative selection |
4635292 |
27566789 |
27566811 |
9 |
- |
27760321 |
HL60 |
viability |
ATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.529973518349901 |
[438,373] |
[639,305] |
6 |
hSpCas9 |
negative selection |
4635293 |
27566812 |
27566834 |
9 |
- |
27760321 |
HL60 |
viability |
ATTAATCTTTGATGGAAACTGG |
C9orf72 |
ENSG00000147894 |
-4.539585697603972 |
[29,26] |
[0,0] |
-9 |
hSpCas9 |
negative selection |
4635294 |
27566888 |
27566910 |
9 |
- |
27760321 |
HL60 |
viability |
TCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
-1.468780347686077 |
[4,1] |
[0,0] |
-8 |
hSpCas9 |
negative selection |
4635295 |
27566915 |
27566937 |
9 |
- |
27760321 |
HL60 |
viability |
TTGCCAACCACACTCTAAATGG |
C9orf72 |
ENSG00000147894 |
0.620583028503979 |
[195,163] |
[213,236] |
7 |
hSpCas9 |
negative selection |
4635296 |
27566728 |
27566750 |
9 |
+ |
27760321 |
HT1080 |
viability |
ACACACTCTATGAAGTGGGAGG |
C9orf72 |
ENSG00000147894 |
0.7586287265692659 |
[316,247] |
[51,341] |
4 |
hSpCas9 |
negative selection |
4718755 |
27566789 |
27566811 |
9 |
- |
27760321 |
HT1080 |
viability |
ATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.42433717151568245 |
[373,291] |
[167,188] |
2 |
hSpCas9 |
negative selection |
4718756 |
27566812 |
27566834 |
9 |
- |
27760321 |
HT1080 |
viability |
ATTAATCTTTGATGGAAACTGG |
C9orf72 |
ENSG00000147894 |
-3.256837660850384 |
[26,20] |
[0,0] |
-7 |
hSpCas9 |
negative selection |
4718757 |
27566888 |
27566910 |
9 |
- |
27760321 |
HT1080 |
viability |
TCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
0.30562769391905587 |
[1,1] |
[0,0] |
1 |
hSpCas9 |
negative selection |
4718758 |
27566915 |
27566937 |
9 |
- |
27760321 |
HT1080 |
viability |
TTGCCAACCACACTCTAAATGG |
C9orf72 |
ENSG00000147894 |
1.3470354476395758 |
[163,127] |
[125,171] |
7 |
hSpCas9 |
negative selection |
4718759 |
27566728 |
27566750 |
9 |
+ |
27760321 |
HT29 |
viability after 7 days |
ACACACTCTATGAAGTGGGAGG |
C9orf72 |
ENSG00000147894 |
0.40640221927270154 |
[316,247] |
[578,504,376] |
6 |
hSpCas9 |
negative selection |
4802218 |
27566789 |
27566811 |
9 |
- |
27760321 |
HT29 |
viability after 7 days |
ATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.48384114518605714 |
[373,291] |
[562,491,730] |
7 |
hSpCas9 |
negative selection |
4802219 |
27566812 |
27566834 |
9 |
- |
27760321 |
HT29 |
viability after 7 days |
ATTAATCTTTGATGGAAACTGG |
C9orf72 |
ENSG00000147894 |
-4.946497914399648 |
[26,20] |
[0,0,0] |
-9 |
hSpCas9 |
negative selection |
4802220 |
27566888 |
27566910 |
9 |
- |
27760321 |
HT29 |
viability after 7 days |
TCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
-1.3840325596302083 |
[1,1] |
[0,0,0] |
-9 |
hSpCas9 |
negative selection |
4802221 |
27566915 |
27566937 |
9 |
- |
27760321 |
HT29 |
viability after 7 days |
TTGCCAACCACACTCTAAATGG |
C9orf72 |
ENSG00000147894 |
-0.1336149440854888 |
[163,127] |
[212,164,141] |
-2 |
hSpCas9 |
negative selection |
4802222 |
27566728 |
27566750 |
9 |
+ |
27760321 |
HT29 |
viability after 25 days |
ACACACTCTATGAAGTGGGAGG |
C9orf72 |
ENSG00000147894 |
1.0995910890457903 |
[316,247] |
[503,740,858] |
9 |
hSpCas9 |
negative selection |
4885681 |
27566789 |
27566811 |
9 |
- |
27760321 |
HT29 |
viability after 25 days |
ATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.9743308259146493 |
[373,291] |
[452,633,1222] |
9 |
hSpCas9 |
negative selection |
4885682 |
27566812 |
27566834 |
9 |
- |
27760321 |
HT29 |
viability after 25 days |
ATTAATCTTTGATGGAAACTGG |
C9orf72 |
ENSG00000147894 |
-0.23909729585318296 |
[26,20] |
[5,47,15] |
-3 |
hSpCas9 |
negative selection |
4885683 |
27566888 |
27566910 |
9 |
- |
27760321 |
HT29 |
viability after 25 days |
TCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
3.001115049014067 |
[1,1] |
[0,52,0] |
9 |
hSpCas9 |
negative selection |
4885684 |
27566915 |
27566937 |
9 |
- |
27760321 |
HT29 |
viability after 25 days |
TTGCCAACCACACTCTAAATGG |
C9orf72 |
ENSG00000147894 |
0.13639402875296747 |
[163,127] |
[191,90,275] |
1 |
hSpCas9 |
negative selection |
4885685 |
27566728 |
27566750 |
9 |
+ |
27760321 |
HT29 |
viability after 22 days |
ACACACTCTATGAAGTGGGAGG |
C9orf72 |
ENSG00000147894 |
0.9666083474042326 |
[316,247] |
[589,607,718] |
9 |
hSpCas9 |
negative selection |
4969144 |
27566789 |
27566811 |
9 |
- |
27760321 |
HT29 |
viability after 22 days |
ATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.7693663836719608 |
[373,291] |
[280,800,898] |
8 |
hSpCas9 |
negative selection |
4969145 |
27566812 |
27566834 |
9 |
- |
27760321 |
HT29 |
viability after 22 days |
ATTAATCTTTGATGGAAACTGG |
C9orf72 |
ENSG00000147894 |
0.27762243904889905 |
[26,20] |
[2,33,64] |
3 |
hSpCas9 |
negative selection |
4969146 |
27566888 |
27566910 |
9 |
- |
27760321 |
HT29 |
viability after 22 days |
TCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
-0.22910909541419233 |
[1,1] |
[1,2,0] |
-2 |
hSpCas9 |
negative selection |
4969147 |
27566915 |
27566937 |
9 |
- |
27760321 |
HT29 |
viability after 22 days |
TTGCCAACCACACTCTAAATGG |
C9orf72 |
ENSG00000147894 |
0.5301518815499696 |
[163,127] |
[157,176,399] |
6 |
hSpCas9 |
negative selection |
4969148 |
27566728 |
27566750 |
9 |
+ |
27760321 |
HT29 |
viability after 19 days |
ACACACTCTATGAAGTGGGAGG |
C9orf72 |
ENSG00000147894 |
0.98683110608841 |
[316,247] |
[539,588,775] |
8 |
hSpCas9 |
negative selection |
5052607 |
27566789 |
27566811 |
9 |
- |
27760321 |
HT29 |
viability after 19 days |
ATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.2987096382346193 |
[373,291] |
[445,575,383] |
3 |
hSpCas9 |
negative selection |
5052608 |
27566812 |
27566834 |
9 |
- |
27760321 |
HT29 |
viability after 19 days |
ATTAATCTTTGATGGAAACTGG |
C9orf72 |
ENSG00000147894 |
-0.49619256202959594 |
[26,20] |
[56,4,0] |
-4 |
hSpCas9 |
negative selection |
5052609 |
27566888 |
27566910 |
9 |
- |
27760321 |
HT29 |
viability after 19 days |
TCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
-1.2155331503635143 |
[1,1] |
[0,0,0] |
-7 |
hSpCas9 |
negative selection |
5052610 |
27566915 |
27566937 |
9 |
- |
27760321 |
HT29 |
viability after 19 days |
TTGCCAACCACACTCTAAATGG |
C9orf72 |
ENSG00000147894 |
0.5350120098013469 |
[163,127] |
[142,348,223] |
5 |
hSpCas9 |
negative selection |
5052611 |
27566728 |
27566750 |
9 |
+ |
27760321 |
HT29 |
viability after 16 days |
ACACACTCTATGAAGTGGGAGG |
C9orf72 |
ENSG00000147894 |
0.5255868734479825 |
[316,247] |
[609,366,404] |
6 |
hSpCas9 |
negative selection |
5136070 |
27566789 |
27566811 |
9 |
- |
27760321 |
HT29 |
viability after 16 days |
ATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.4635717023824764 |
[373,291] |
[304,454,762] |
5 |
hSpCas9 |
negative selection |
5136071 |
27566812 |
27566834 |
9 |
- |
27760321 |
HT29 |
viability after 16 days |
ATTAATCTTTGATGGAAACTGG |
C9orf72 |
ENSG00000147894 |
-1.8785941541493107 |
[26,20] |
[0,18,0] |
-8 |
hSpCas9 |
negative selection |
5136072 |
27566888 |
27566910 |
9 |
- |
27760321 |
HT29 |
viability after 16 days |
TCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
0.07899506658641275 |
[1,1] |
[0,4,0] |
0 |
hSpCas9 |
negative selection |
5136073 |
27566915 |
27566937 |
9 |
- |
27760321 |
HT29 |
viability after 16 days |
TTGCCAACCACACTCTAAATGG |
C9orf72 |
ENSG00000147894 |
0.515056930606532 |
[163,127] |
[266,172,264] |
6 |
hSpCas9 |
negative selection |
5136074 |
27566728 |
27566750 |
9 |
+ |
27760321 |
HT29 |
viability after 13 days |
ACACACTCTATGAAGTGGGAGG |
C9orf72 |
ENSG00000147894 |
0.6661883135621196 |
[316,247] |
[528,556,476] |
8 |
hSpCas9 |
negative selection |
5219533 |
27566789 |
27566811 |
9 |
- |
27760321 |
HT29 |
viability after 13 days |
ATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.49721183416317993 |
[373,291] |
[554,607,476] |
6 |
hSpCas9 |
negative selection |
5219534 |
27566812 |
27566834 |
9 |
- |
27760321 |
HT29 |
viability after 13 days |
ATTAATCTTTGATGGAAACTGG |
C9orf72 |
ENSG00000147894 |
0.06366344874144447 |
[26,20] |
[38,48,0] |
0 |
hSpCas9 |
negative selection |
5219535 |
27566888 |
27566910 |
9 |
- |
27760321 |
HT29 |
viability after 13 days |
TCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
1.061224493936078 |
[1,1] |
[1,11,0] |
9 |
hSpCas9 |
negative selection |
5219536 |
27566915 |
27566937 |
9 |
- |
27760321 |
HT29 |
viability after 13 days |
TTGCCAACCACACTCTAAATGG |
C9orf72 |
ENSG00000147894 |
0.4887478044528193 |
[163,127] |
[300,108,298] |
6 |
hSpCas9 |
negative selection |
5219537 |
27566728 |
27566750 |
9 |
+ |
27760321 |
HT29 |
viability after 10 days |
ACACACTCTATGAAGTGGGAGG |
C9orf72 |
ENSG00000147894 |
0.5652566173684317 |
[316,247] |
[564,525,475] |
7 |
hSpCas9 |
negative selection |
5302996 |
27566789 |
27566811 |
9 |
- |
27760321 |
HT29 |
viability after 10 days |
ATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.657274343067704 |
[373,291] |
[805,486,668] |
8 |
hSpCas9 |
negative selection |
5302997 |
27566812 |
27566834 |
9 |
- |
27760321 |
HT29 |
viability after 10 days |
ATTAATCTTTGATGGAAACTGG |
C9orf72 |
ENSG00000147894 |
-0.9969219864168783 |
[26,20] |
[6,37,0] |
-8 |
hSpCas9 |
negative selection |
5302998 |
27566888 |
27566910 |
9 |
- |
27760321 |
HT29 |
viability after 10 days |
TCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
2.166625833496532 |
[1,1] |
[0,32,0] |
9 |
hSpCas9 |
negative selection |
5302999 |
27566915 |
27566937 |
9 |
- |
27760321 |
HT29 |
viability after 10 days |
TTGCCAACCACACTCTAAATGG |
C9orf72 |
ENSG00000147894 |
0.5842042570637778 |
[163,127] |
[268,418,138] |
7 |
hSpCas9 |
negative selection |
5303000 |
27566728 |
27566750 |
9 |
+ |
27760321 |
MOLM13 |
viability |
ACACACTCTATGAAGTGGGAGG |
C9orf72 |
ENSG00000147894 |
0.6204066670986093 |
[440,316] |
[299,346] |
4 |
hSpCas9 |
negative selection |
5386459 |
27566789 |
27566811 |
9 |
- |
27760321 |
MOLM13 |
viability |
ATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
-0.43644434090529244 |
[438,373] |
[169,167] |
-3 |
hSpCas9 |
negative selection |
5386460 |
27566812 |
27566834 |
9 |
- |
27760321 |
MOLM13 |
viability |
ATTAATCTTTGATGGAAACTGG |
C9orf72 |
ENSG00000147894 |
-4.00565872298224 |
[29,26] |
[0,0] |
-9 |
hSpCas9 |
negative selection |
5386461 |
27566888 |
27566910 |
9 |
- |
27760321 |
MOLM13 |
viability |
TCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
-0.9348533730643451 |
[4,1] |
[0,0] |
-5 |
hSpCas9 |
negative selection |
5386462 |
27566915 |
27566937 |
9 |
- |
27760321 |
MOLM13 |
viability |
TTGCCAACCACACTCTAAATGG |
C9orf72 |
ENSG00000147894 |
0.8596979845134292 |
[195,163] |
[155,206] |
6 |
hSpCas9 |
negative selection |
5386463 |
27573003 |
27573026 |
9 |
+ |
27661255 |
K562 |
viability |
GTTCCTAGCGAACCCCGACTTGG |
C9orf72 |
ENSG00000147894 |
0.06355560486541212 |
[801,1016] |
[843,680] |
2 |
dCas9-KRAB |
negative selection |
5467540 |
27573143 |
27573166 |
9 |
+ |
27661255 |
K562 |
viability |
GGAGACAGCTCGGGTACTGAGGG |
C9orf72 |
ENSG00000147894 |
0.08618104830777801 |
[648,815] |
[603,630] |
3 |
dCas9-KRAB |
negative selection |
5467541 |
27572955 |
27572978 |
9 |
- |
27661255 |
K562 |
viability |
GATCATGCGGGATGAGATGGGGG |
C9orf72 |
ENSG00000147894 |
0.048967157021094 |
[1104,1194] |
[955,942] |
1 |
dCas9-KRAB |
negative selection |
5467542 |
27573015 |
27573038 |
9 |
- |
27661255 |
K562 |
viability |
GGCTTCTGCGGACCAAGTCGGGG |
C9orf72 |
ENSG00000147894 |
0.15818453549432154 |
[392,612] |
[426,459] |
5 |
dCas9-KRAB |
negative selection |
5467543 |
27573192 |
27573215 |
9 |
- |
27661255 |
K562 |
viability |
GCGGCGCAGGGACAAGGGATGGG |
C9orf72 |
ENSG00000147894 |
0.04005467395560869 |
[149,147] |
[116,126] |
1 |
dCas9-KRAB |
negative selection |
5467544 |
27573356 |
27573379 |
9 |
- |
27661255 |
K562 |
viability |
GGAAGAGGCGCGGGTAGAAGCGG |
C9orf72 |
ENSG00000147894 |
0.033723164734377864 |
[1507,1985] |
[1536,1322] |
1 |
dCas9-KRAB |
negative selection |
5467545 |
27573400 |
27573423 |
9 |
- |
27661255 |
K562 |
viability |
GGAGGCGGCATCCTGGCGGGTGG |
C9orf72 |
ENSG00000147894 |
-0.04750450478314239 |
[1875,1824] |
[1545,1332] |
-2 |
dCas9-KRAB |
negative selection |
5467546 |
27566789 |
27566812 |
9 |
- |
27260156 |
BXPC3 |
viability |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.3588291905489727 |
[598] |
[810,890,707,786] |
7 |
hSpCas9 |
negative selection |
5532918 |
27558490 |
27558513 |
9 |
- |
27260156 |
BXPC3 |
viability |
CTTTGTACAAGGCCTGCTAAAGG |
C9orf72 |
ENSG00000147894 |
0.2078859043659233 |
[631] |
[671,807,726,858] |
4 |
hSpCas9 |
negative selection |
5532919 |
27562448 |
27562471 |
9 |
- |
27260156 |
BXPC3 |
viability |
AGTATTATTCCAATGCTTACTGG |
C9orf72 |
ENSG00000147894 |
0.1199073609208261 |
[1132] |
[1123,1276,1249,1537] |
2 |
hSpCas9 |
negative selection |
5532920 |
27562439 |
27562462 |
9 |
+ |
27260156 |
BXPC3 |
viability |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
0.1061328398116117 |
[705] |
[745,839,843,738] |
2 |
hSpCas9 |
negative selection |
5597199 |
27566886 |
27566909 |
9 |
+ |
27260156 |
BXPC3 |
viability |
CACCACTCTCTGCATTTCGAAGG |
C9orf72 |
ENSG00000147894 |
-0.30087524834598933 |
[192] |
[184,105,133,238] |
-6 |
hSpCas9 |
negative selection |
5597200 |
27558536 |
27558559 |
9 |
+ |
27260156 |
BXPC3 |
viability |
TGATTCTGCTTCACATAACCTGG |
C9orf72 |
ENSG00000147894 |
0.08896432159002976 |
[976] |
[917,1143,987,1331] |
2 |
hSpCas9 |
negative selection |
5597201 |
27566789 |
27566812 |
9 |
- |
27260156 |
A673 |
viability |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.3204050774434631 |
[598] |
[986,935,880,789] |
7 |
hSpCas9 |
negative selection |
5654169 |
27558490 |
27558513 |
9 |
- |
27260156 |
A673 |
viability |
CTTTGTACAAGGCCTGCTAAAGG |
C9orf72 |
ENSG00000147894 |
0.4621499565558019 |
[631] |
[946,1245,1012,951] |
9 |
hSpCas9 |
negative selection |
5654170 |
27562448 |
27562471 |
9 |
- |
27260156 |
A673 |
viability |
AGTATTATTCCAATGCTTACTGG |
C9orf72 |
ENSG00000147894 |
0.06926504749668161 |
[1132] |
[1440,1524,1320,1418] |
1 |
hSpCas9 |
negative selection |
5654171 |
27562439 |
27562462 |
9 |
+ |
27260156 |
A673 |
viability |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
0.08221278889037775 |
[705] |
[854,818,968,943] |
2 |
hSpCas9 |
negative selection |
5718450 |
27566886 |
27566909 |
9 |
+ |
27260156 |
A673 |
viability |
CACCACTCTCTGCATTTCGAAGG |
C9orf72 |
ENSG00000147894 |
-0.07176767316976207 |
[192] |
[271,191,223,198] |
-2 |
hSpCas9 |
negative selection |
5718451 |
27558536 |
27558559 |
9 |
+ |
27260156 |
A673 |
viability |
TGATTCTGCTTCACATAACCTGG |
C9orf72 |
ENSG00000147894 |
0.18766752871841375 |
[976] |
[1566,1172,1324,1305] |
4 |
hSpCas9 |
negative selection |
5718452 |
27566789 |
27566812 |
9 |
- |
27260156 |
A375 |
viability |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.28967945736784945 |
[598] |
[931,919,968,632] |
4 |
hSpCas9 |
negative selection |
5775420 |
27558490 |
27558513 |
9 |
- |
27260156 |
A375 |
viability |
CTTTGTACAAGGCCTGCTAAAGG |
C9orf72 |
ENSG00000147894 |
0.3458084480672459 |
[631] |
[908,1062,837,953] |
5 |
hSpCas9 |
negative selection |
5775421 |
27562448 |
27562471 |
9 |
- |
27260156 |
A375 |
viability |
AGTATTATTCCAATGCTTACTGG |
C9orf72 |
ENSG00000147894 |
0.35910686143694615 |
[1132] |
[1586,1988,1793,1478] |
5 |
hSpCas9 |
negative selection |
5775422 |
27562439 |
27562462 |
9 |
+ |
27260156 |
A375 |
viability |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
-0.4228511024381521 |
[705] |
[425,850,546,659] |
-5 |
hSpCas9 |
negative selection |
5839701 |
27566886 |
27566909 |
9 |
+ |
27260156 |
A375 |
viability |
CACCACTCTCTGCATTTCGAAGG |
C9orf72 |
ENSG00000147894 |
0.05762107805667882 |
[192] |
[323,415,169,72] |
0 |
hSpCas9 |
negative selection |
5839702 |
27558536 |
27558559 |
9 |
+ |
27260156 |
A375 |
viability |
TGATTCTGCTTCACATAACCTGG |
C9orf72 |
ENSG00000147894 |
0.033716359005889984 |
[976] |
[779,1325,1412,1167] |
0 |
hSpCas9 |
negative selection |
5839703 |
27566789 |
27566812 |
9 |
- |
27260156 |
COLO741 |
viability |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.22285686148853306 |
[598] |
[1032,788,868] |
5 |
hSpCas9 |
negative selection |
5896671 |
27558490 |
27558513 |
9 |
- |
27260156 |
COLO741 |
viability |
CTTTGTACAAGGCCTGCTAAAGG |
C9orf72 |
ENSG00000147894 |
0.12184646202731503 |
[631] |
[932,888,820] |
2 |
hSpCas9 |
negative selection |
5896672 |
27562448 |
27562471 |
9 |
- |
27260156 |
COLO741 |
viability |
AGTATTATTCCAATGCTTACTGG |
C9orf72 |
ENSG00000147894 |
0.07975326475476674 |
[1132] |
[1681,1652,1282] |
1 |
hSpCas9 |
negative selection |
5896673 |
27562439 |
27562462 |
9 |
+ |
27260156 |
COLO741 |
viability |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
0.007066690071579007 |
[705] |
[851,843,1008] |
0 |
hSpCas9 |
negative selection |
5960952 |
27566886 |
27566909 |
9 |
+ |
27260156 |
COLO741 |
viability |
CACCACTCTCTGCATTTCGAAGG |
C9orf72 |
ENSG00000147894 |
-0.17634000480641476 |
[192] |
[137,213,289] |
-4 |
hSpCas9 |
negative selection |
5960953 |
27558536 |
27558559 |
9 |
+ |
27260156 |
COLO741 |
viability |
TGATTCTGCTTCACATAACCTGG |
C9orf72 |
ENSG00000147894 |
0.3357867213644241 |
[976] |
[1575,1572,1573] |
7 |
hSpCas9 |
negative selection |
5960954 |
27566789 |
27566812 |
9 |
- |
27260156 |
CAL120 |
viability |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.38829633102511524 |
[598] |
[941,984,993] |
6 |
hSpCas9 |
negative selection |
6017922 |
27558490 |
27558513 |
9 |
- |
27260156 |
CAL120 |
viability |
CTTTGTACAAGGCCTGCTAAAGG |
C9orf72 |
ENSG00000147894 |
0.19540389777670403 |
[631] |
[928,904,871] |
3 |
hSpCas9 |
negative selection |
6017923 |
27562448 |
27562471 |
9 |
- |
27260156 |
CAL120 |
viability |
AGTATTATTCCAATGCTTACTGG |
C9orf72 |
ENSG00000147894 |
0.12612746478813985 |
[1132] |
[1604,1792,1232] |
2 |
hSpCas9 |
negative selection |
6017924 |
27562439 |
27562462 |
9 |
+ |
27260156 |
CAL120 |
viability |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
0.30571599201711874 |
[705] |
[1150,1418,703] |
4 |
hSpCas9 |
negative selection |
6082203 |
27566886 |
27566909 |
9 |
+ |
27260156 |
CAL120 |
viability |
CACCACTCTCTGCATTTCGAAGG |
C9orf72 |
ENSG00000147894 |
-0.1314249593891208 |
[192] |
[225,118,311] |
-2 |
hSpCas9 |
negative selection |
6082204 |
27558536 |
27558559 |
9 |
+ |
27260156 |
CAL120 |
viability |
TGATTCTGCTTCACATAACCTGG |
C9orf72 |
ENSG00000147894 |
0.2506231005485404 |
[976] |
[2248,1075,1139] |
4 |
hSpCas9 |
negative selection |
6082205 |
27566789 |
27566812 |
9 |
- |
27260156 |
CADOES1 |
viability |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.38883751065004596 |
[598] |
[698,650,930,632] |
6 |
hSpCas9 |
negative selection |
6139173 |
27558490 |
27558513 |
9 |
- |
27260156 |
CADOES1 |
viability |
CTTTGTACAAGGCCTGCTAAAGG |
C9orf72 |
ENSG00000147894 |
0.26216832435719445 |
[631] |
[598,694,666,864] |
4 |
hSpCas9 |
negative selection |
6139174 |
27562448 |
27562471 |
9 |
- |
27260156 |
CADOES1 |
viability |
AGTATTATTCCAATGCTTACTGG |
C9orf72 |
ENSG00000147894 |
0.3212719343199173 |
[1132] |
[1164,1358,1370,1373] |
5 |
hSpCas9 |
negative selection |
6139175 |
27562439 |
27562462 |
9 |
+ |
27260156 |
CADOES1 |
viability |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
-0.03440835456919966 |
[705] |
[699,736,528,596] |
0 |
hSpCas9 |
negative selection |
6203454 |
27566886 |
27566909 |
9 |
+ |
27260156 |
CADOES1 |
viability |
CACCACTCTCTGCATTTCGAAGG |
C9orf72 |
ENSG00000147894 |
-0.1094290985801809 |
[192] |
[204,115,135,209] |
-2 |
hSpCas9 |
negative selection |
6203455 |
27558536 |
27558559 |
9 |
+ |
27260156 |
CADOES1 |
viability |
TGATTCTGCTTCACATAACCTGG |
C9orf72 |
ENSG00000147894 |
0.21829096923724634 |
[976] |
[907,1074,1106,1141] |
3 |
hSpCas9 |
negative selection |
6203456 |
27566789 |
27566812 |
9 |
- |
27260156 |
EWS502 |
viability |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.22366001349406067 |
[598] |
[592,775,816,795] |
4 |
hSpCas9 |
negative selection |
6260424 |
27558490 |
27558513 |
9 |
- |
27260156 |
EWS502 |
viability |
CTTTGTACAAGGCCTGCTAAAGG |
C9orf72 |
ENSG00000147894 |
0.4893270119812157 |
[631] |
[797,1086,850,1035] |
8 |
hSpCas9 |
negative selection |
6260425 |
27562448 |
27562471 |
9 |
- |
27260156 |
EWS502 |
viability |
AGTATTATTCCAATGCTTACTGG |
C9orf72 |
ENSG00000147894 |
0.1628219779161979 |
[1132] |
[1460,1277,1303,1310] |
3 |
hSpCas9 |
negative selection |
6260426 |
27562439 |
27562462 |
9 |
+ |
27260156 |
EWS502 |
viability |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
0.09377570485173625 |
[705] |
[893,682,791,813] |
1 |
hSpCas9 |
negative selection |
6324705 |
27566886 |
27566909 |
9 |
+ |
27260156 |
EWS502 |
viability |
CACCACTCTCTGCATTTCGAAGG |
C9orf72 |
ENSG00000147894 |
0.24879580388749223 |
[192] |
[237,161,216,365] |
4 |
hSpCas9 |
negative selection |
6324706 |
27558536 |
27558559 |
9 |
+ |
27260156 |
EWS502 |
viability |
TGATTCTGCTTCACATAACCTGG |
C9orf72 |
ENSG00000147894 |
0.3040730542897916 |
[976] |
[1491,1058,1148,1394] |
5 |
hSpCas9 |
negative selection |
6324707 |
27566789 |
27566812 |
9 |
- |
27260156 |
EW8 |
viability |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.31088722142764785 |
[598] |
[737,628,502,568] |
6 |
hSpCas9 |
negative selection |
6381675 |
27558490 |
27558513 |
9 |
- |
27260156 |
EW8 |
viability |
CTTTGTACAAGGCCTGCTAAAGG |
C9orf72 |
ENSG00000147894 |
0.2817260144258947 |
[631] |
[756,666,635,441] |
5 |
hSpCas9 |
negative selection |
6381676 |
27562448 |
27562471 |
9 |
- |
27260156 |
EW8 |
viability |
AGTATTATTCCAATGCTTACTGG |
C9orf72 |
ENSG00000147894 |
0.13665027360593807 |
[1132] |
[1118,920,981,1028] |
2 |
hSpCas9 |
negative selection |
6381677 |
27562439 |
27562462 |
9 |
+ |
27260156 |
EW8 |
viability |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
-0.008954302461619323 |
[705] |
[704,681,430,493] |
0 |
hSpCas9 |
negative selection |
6445956 |
27566886 |
27566909 |
9 |
+ |
27260156 |
EW8 |
viability |
CACCACTCTCTGCATTTCGAAGG |
C9orf72 |
ENSG00000147894 |
0.17877464100097962 |
[192] |
[226,158,159,169] |
3 |
hSpCas9 |
negative selection |
6445957 |
27558536 |
27558559 |
9 |
+ |
27260156 |
EW8 |
viability |
TGATTCTGCTTCACATAACCTGG |
C9orf72 |
ENSG00000147894 |
0.517091301255777 |
[976] |
[1658,1100,743,1148] |
8 |
hSpCas9 |
negative selection |
6445958 |
27566789 |
27566812 |
9 |
- |
27260156 |
CORL105 |
viability |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.206130782455973 |
[598] |
[712,911,1013,623] |
4 |
hSpCas9 |
negative selection |
6502926 |
27558490 |
27558513 |
9 |
- |
27260156 |
CORL105 |
viability |
CTTTGTACAAGGCCTGCTAAAGG |
C9orf72 |
ENSG00000147894 |
0.46498822260401645 |
[631] |
[1078,863,1131,1031] |
8 |
hSpCas9 |
negative selection |
6502927 |
27562448 |
27562471 |
9 |
- |
27260156 |
CORL105 |
viability |
AGTATTATTCCAATGCTTACTGG |
C9orf72 |
ENSG00000147894 |
0.10112077908744976 |
[1132] |
[1318,1433,1415,1515] |
2 |
hSpCas9 |
negative selection |
6502928 |
27562439 |
27562462 |
9 |
+ |
27260156 |
CORL105 |
viability |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
-0.0410392102256536 |
[705] |
[876,633,912,811] |
-1 |
hSpCas9 |
negative selection |
6567207 |
27566886 |
27566909 |
9 |
+ |
27260156 |
CORL105 |
viability |
CACCACTCTCTGCATTTCGAAGG |
C9orf72 |
ENSG00000147894 |
0.06334334521003404 |
[192] |
[308,222,221,190] |
1 |
hSpCas9 |
negative selection |
6567208 |
27558536 |
27558559 |
9 |
+ |
27260156 |
CORL105 |
viability |
TGATTCTGCTTCACATAACCTGG |
C9orf72 |
ENSG00000147894 |
0.27589330169005644 |
[976] |
[1289,1365,1438,1448] |
5 |
hSpCas9 |
negative selection |
6567209 |
27566789 |
27566812 |
9 |
- |
27260156 |
HS294T |
viability |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.7602096963728209 |
[598] |
[323,427,509,294] |
8 |
hSpCas9 |
negative selection |
6624177 |
27558490 |
27558513 |
9 |
- |
27260156 |
HS294T |
viability |
CTTTGTACAAGGCCTGCTAAAGG |
C9orf72 |
ENSG00000147894 |
0.266350066600105 |
[631] |
[242,263,297,391] |
3 |
hSpCas9 |
negative selection |
6624178 |
27562448 |
27562471 |
9 |
- |
27260156 |
HS294T |
viability |
AGTATTATTCCAATGCTTACTGG |
C9orf72 |
ENSG00000147894 |
0.461561044873527 |
[1132] |
[863,490,437,594] |
6 |
hSpCas9 |
negative selection |
6624179 |
27562439 |
27562462 |
9 |
+ |
27260156 |
HS294T |
viability |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
-0.010210102539486288 |
[705] |
[186,226,287,414] |
0 |
hSpCas9 |
negative selection |
6688458 |
27566886 |
27566909 |
9 |
+ |
27260156 |
HS294T |
viability |
CACCACTCTCTGCATTTCGAAGG |
C9orf72 |
ENSG00000147894 |
-0.17678891451007295 |
[192] |
[55,55,52,106] |
-2 |
hSpCas9 |
negative selection |
6688459 |
27558536 |
27558559 |
9 |
+ |
27260156 |
HS294T |
viability |
TGATTCTGCTTCACATAACCTGG |
C9orf72 |
ENSG00000147894 |
0.08664073972420949 |
[976] |
[440,341,338,494] |
1 |
hSpCas9 |
negative selection |
6688460 |
27566789 |
27566812 |
9 |
- |
27260156 |
HCC44 |
viability |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.24745882278684933 |
[598] |
[1038,342,1051,902] |
4 |
hSpCas9 |
negative selection |
6745428 |
27558490 |
27558513 |
9 |
- |
27260156 |
HCC44 |
viability |
CTTTGTACAAGGCCTGCTAAAGG |
C9orf72 |
ENSG00000147894 |
0.29821597035634867 |
[631] |
[985,934,975,637] |
5 |
hSpCas9 |
negative selection |
6745429 |
27562448 |
27562471 |
9 |
- |
27260156 |
HCC44 |
viability |
AGTATTATTCCAATGCTTACTGG |
C9orf72 |
ENSG00000147894 |
0.15001756467945304 |
[1132] |
[1434,1154,1718,1455] |
2 |
hSpCas9 |
negative selection |
6745430 |
27562439 |
27562462 |
9 |
+ |
27260156 |
HCC44 |
viability |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
0.1741073242924226 |
[705] |
[1062,626,815,1121] |
2 |
hSpCas9 |
negative selection |
6809709 |
27566886 |
27566909 |
9 |
+ |
27260156 |
HCC44 |
viability |
CACCACTCTCTGCATTTCGAAGG |
C9orf72 |
ENSG00000147894 |
-0.3333771401069445 |
[192] |
[194,200,231,74] |
-5 |
hSpCas9 |
negative selection |
6809710 |
27558536 |
27558559 |
9 |
+ |
27260156 |
HCC44 |
viability |
TGATTCTGCTTCACATAACCTGG |
C9orf72 |
ENSG00000147894 |
0.5869136098573786 |
[976] |
[1708,1477,1630,1826] |
8 |
hSpCas9 |
negative selection |
6809711 |
27566789 |
27566812 |
9 |
- |
27260156 |
G402 |
viability |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.4917394867553893 |
[598] |
[1169,1276,1132,583] |
6 |
hSpCas9 |
negative selection |
6866679 |
27558490 |
27558513 |
9 |
- |
27260156 |
G402 |
viability |
CTTTGTACAAGGCCTGCTAAAGG |
C9orf72 |
ENSG00000147894 |
0.24294778293218405 |
[631] |
[709,868,1036,994] |
3 |
hSpCas9 |
negative selection |
6866680 |
27562448 |
27562471 |
9 |
- |
27260156 |
G402 |
viability |
AGTATTATTCCAATGCTTACTGG |
C9orf72 |
ENSG00000147894 |
0.33377714496246225 |
[1132] |
[2906,1648,1262,1326] |
4 |
hSpCas9 |
negative selection |
6866681 |
27562439 |
27562462 |
9 |
+ |
27260156 |
G402 |
viability |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
-0.1696762498337101 |
[705] |
[1265,557,664,637] |
-2 |
hSpCas9 |
negative selection |
6930960 |
27566886 |
27566909 |
9 |
+ |
27260156 |
G402 |
viability |
CACCACTCTCTGCATTTCGAAGG |
C9orf72 |
ENSG00000147894 |
1.0878966589887824 |
[192] |
[109,375,573,858] |
9 |
hSpCas9 |
negative selection |
6930961 |
27558536 |
27558559 |
9 |
+ |
27260156 |
G402 |
viability |
TGATTCTGCTTCACATAACCTGG |
C9orf72 |
ENSG00000147894 |
0.24679147823367353 |
[976] |
[1380,1174,1113,1937] |
3 |
hSpCas9 |
negative selection |
6930962 |
27566789 |
27566812 |
9 |
- |
27260156 |
L33 |
viability |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.5075449404476382 |
[598] |
[800,281,613,940] |
8 |
hSpCas9 |
negative selection |
6987930 |
27558490 |
27558513 |
9 |
- |
27260156 |
L33 |
viability |
CTTTGTACAAGGCCTGCTAAAGG |
C9orf72 |
ENSG00000147894 |
0.08174691549357044 |
[631] |
[713,301,426,544] |
1 |
hSpCas9 |
negative selection |
6987931 |
27562448 |
27562471 |
9 |
- |
27260156 |
L33 |
viability |
AGTATTATTCCAATGCTTACTGG |
C9orf72 |
ENSG00000147894 |
0.00026215035125720654 |
[1132] |
[1237,424,706,1129] |
0 |
hSpCas9 |
negative selection |
6987932 |
27562439 |
27562462 |
9 |
+ |
27260156 |
L33 |
viability |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
-0.06343497588452585 |
[705] |
[639,201,491,786] |
-1 |
hSpCas9 |
negative selection |
7052211 |
27566886 |
27566909 |
9 |
+ |
27260156 |
L33 |
viability |
CACCACTCTCTGCATTTCGAAGG |
C9orf72 |
ENSG00000147894 |
-0.004553132623958733 |
[192] |
[141,88,132,199] |
0 |
hSpCas9 |
negative selection |
7052212 |
27558536 |
27558559 |
9 |
+ |
27260156 |
L33 |
viability |
TGATTCTGCTTCACATAACCTGG |
C9orf72 |
ENSG00000147894 |
-0.08463187983938647 |
[976] |
[866,393,646,829] |
-2 |
hSpCas9 |
negative selection |
7052213 |
27566789 |
27566812 |
9 |
- |
27260156 |
K562 |
viability |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.23349683565165985 |
[598] |
[457,858,621,563] |
3 |
hSpCas9 |
negative selection |
7109181 |
27558490 |
27558513 |
9 |
- |
27260156 |
K562 |
viability |
CTTTGTACAAGGCCTGCTAAAGG |
C9orf72 |
ENSG00000147894 |
0.6934070492221465 |
[631] |
[1488,890,753,575] |
8 |
hSpCas9 |
negative selection |
7109182 |
27562448 |
27562471 |
9 |
- |
27260156 |
K562 |
viability |
AGTATTATTCCAATGCTTACTGG |
C9orf72 |
ENSG00000147894 |
0.27064459952648723 |
[1132] |
[1121,1056,1373,1270] |
3 |
hSpCas9 |
negative selection |
7109183 |
27562439 |
27562462 |
9 |
+ |
27260156 |
K562 |
viability |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
0.21432864232909887 |
[705] |
[851,591,476,958] |
2 |
hSpCas9 |
negative selection |
7173462 |
27566886 |
27566909 |
9 |
+ |
27260156 |
K562 |
viability |
CACCACTCTCTGCATTTCGAAGG |
C9orf72 |
ENSG00000147894 |
0.49453948331099307 |
[192] |
[267,351,278,90] |
6 |
hSpCas9 |
negative selection |
7173463 |
27558536 |
27558559 |
9 |
+ |
27260156 |
K562 |
viability |
TGATTCTGCTTCACATAACCTGG |
C9orf72 |
ENSG00000147894 |
0.35728275183680713 |
[976] |
[1321,761,1582,805] |
4 |
hSpCas9 |
negative selection |
7173464 |
27566789 |
27566812 |
9 |
- |
27260156 |
HT29 |
viability |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.2503468377933961 |
[598] |
[996,946,788,755] |
5 |
hSpCas9 |
negative selection |
7230432 |
27558490 |
27558513 |
9 |
- |
27260156 |
HT29 |
viability |
CTTTGTACAAGGCCTGCTAAAGG |
C9orf72 |
ENSG00000147894 |
0.31726252165396457 |
[631] |
[999,995,995,849] |
6 |
hSpCas9 |
negative selection |
7230433 |
27562448 |
27562471 |
9 |
- |
27260156 |
HT29 |
viability |
AGTATTATTCCAATGCTTACTGG |
C9orf72 |
ENSG00000147894 |
0.10740696646725079 |
[1132] |
[1577,1462,1318,1559] |
2 |
hSpCas9 |
negative selection |
7230434 |
27562439 |
27562462 |
9 |
+ |
27260156 |
HT29 |
viability |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
0.15967044259382313 |
[705] |
[969,1144,891,850] |
3 |
hSpCas9 |
negative selection |
7294713 |
27566886 |
27566909 |
9 |
+ |
27260156 |
HT29 |
viability |
CACCACTCTCTGCATTTCGAAGG |
C9orf72 |
ENSG00000147894 |
-0.1507011828237479 |
[192] |
[286,237,196,138] |
-3 |
hSpCas9 |
negative selection |
7294714 |
27558536 |
27558559 |
9 |
+ |
27260156 |
HT29 |
viability |
TGATTCTGCTTCACATAACCTGG |
C9orf72 |
ENSG00000147894 |
0.14984860092036412 |
[976] |
[1395,1347,1435,1114] |
3 |
hSpCas9 |
negative selection |
7294715 |
27566789 |
27566812 |
9 |
- |
27260156 |
MHHES1 |
viability |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.30979530174028974 |
[598] |
[686,1065,836,758] |
5 |
hSpCas9 |
negative selection |
7351683 |
27558490 |
27558513 |
9 |
- |
27260156 |
MHHES1 |
viability |
CTTTGTACAAGGCCTGCTAAAGG |
C9orf72 |
ENSG00000147894 |
0.3777520056224351 |
[631] |
[975,1237,779,759] |
6 |
hSpCas9 |
negative selection |
7351684 |
27562448 |
27562471 |
9 |
- |
27260156 |
MHHES1 |
viability |
AGTATTATTCCAATGCTTACTGG |
C9orf72 |
ENSG00000147894 |
0.2481126393858808 |
[1132] |
[2321,1844,1137,977] |
4 |
hSpCas9 |
negative selection |
7351685 |
27562439 |
27562462 |
9 |
+ |
27260156 |
MHHES1 |
viability |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
0.12059112725802978 |
[705] |
[980,1007,855,667] |
2 |
hSpCas9 |
negative selection |
7415964 |
27566886 |
27566909 |
9 |
+ |
27260156 |
MHHES1 |
viability |
CACCACTCTCTGCATTTCGAAGG |
C9orf72 |
ENSG00000147894 |
0.0033495556636677914 |
[192] |
[322,196,201,166] |
0 |
hSpCas9 |
negative selection |
7415965 |
27558536 |
27558559 |
9 |
+ |
27260156 |
MHHES1 |
viability |
TGATTCTGCTTCACATAACCTGG |
C9orf72 |
ENSG00000147894 |
0.278326896930702 |
[976] |
[1399,1358,1685,962] |
5 |
hSpCas9 |
negative selection |
7415966 |
27566789 |
27566812 |
9 |
- |
27260156 |
MEWO |
viability |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.478098039171503 |
[598] |
[890,775,695] |
8 |
hSpCas9 |
negative selection |
7472934 |
27558490 |
27558513 |
9 |
- |
27260156 |
MEWO |
viability |
CTTTGTACAAGGCCTGCTAAAGG |
C9orf72 |
ENSG00000147894 |
0.12006740422684686 |
[631] |
[878,524,569] |
2 |
hSpCas9 |
negative selection |
7472935 |
27562448 |
27562471 |
9 |
- |
27260156 |
MEWO |
viability |
AGTATTATTCCAATGCTTACTGG |
C9orf72 |
ENSG00000147894 |
-0.10420748019239356 |
[1132] |
[1056,963,950] |
-2 |
hSpCas9 |
negative selection |
7472936 |
27562439 |
27562462 |
9 |
+ |
27260156 |
MEWO |
viability |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
0.1048933877509104 |
[705] |
[731,709,692] |
2 |
hSpCas9 |
negative selection |
7537215 |
27566886 |
27566909 |
9 |
+ |
27260156 |
MEWO |
viability |
CACCACTCTCTGCATTTCGAAGG |
C9orf72 |
ENSG00000147894 |
-0.22091385076411463 |
[192] |
[267,83,134] |
-5 |
hSpCas9 |
negative selection |
7537216 |
27558536 |
27558559 |
9 |
+ |
27260156 |
MEWO |
viability |
TGATTCTGCTTCACATAACCTGG |
C9orf72 |
ENSG00000147894 |
0.12415419010216877 |
[976] |
[1283,811,948] |
2 |
hSpCas9 |
negative selection |
7537217 |
27566789 |
27566812 |
9 |
- |
27260156 |
LNCAPCLONEFGC |
viability |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.2811190488180339 |
[598] |
[680,624,761,585] |
4 |
hSpCas9 |
negative selection |
7594185 |
27558490 |
27558513 |
9 |
- |
27260156 |
LNCAPCLONEFGC |
viability |
CTTTGTACAAGGCCTGCTAAAGG |
C9orf72 |
ENSG00000147894 |
0.6251232022206841 |
[631] |
[846,929,916,839] |
8 |
hSpCas9 |
negative selection |
7594186 |
27562448 |
27562471 |
9 |
- |
27260156 |
LNCAPCLONEFGC |
viability |
AGTATTATTCCAATGCTTACTGG |
C9orf72 |
ENSG00000147894 |
0.2569715369441383 |
[1132] |
[1292,1163,1517,975] |
4 |
hSpCas9 |
negative selection |
7594187 |
27562439 |
27562462 |
9 |
+ |
27260156 |
LNCAPCLONEFGC |
viability |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
0.26936297999161096 |
[705] |
[671,592,1259,643] |
4 |
hSpCas9 |
negative selection |
7658466 |
27566886 |
27566909 |
9 |
+ |
27260156 |
LNCAPCLONEFGC |
viability |
CACCACTCTCTGCATTTCGAAGG |
C9orf72 |
ENSG00000147894 |
-0.15846075917404057 |
[192] |
[187,124,129,180] |
-3 |
hSpCas9 |
negative selection |
7658467 |
27558536 |
27558559 |
9 |
+ |
27260156 |
LNCAPCLONEFGC |
viability |
TGATTCTGCTTCACATAACCTGG |
C9orf72 |
ENSG00000147894 |
0.29488915016779105 |
[976] |
[877,1149,1287,1055] |
4 |
hSpCas9 |
negative selection |
7658468 |
27566789 |
27566812 |
9 |
- |
27260156 |
PANC0327 |
viability |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.6329180643639778 |
[598] |
[741,1006,813,706] |
8 |
hSpCas9 |
negative selection |
7715436 |
27558490 |
27558513 |
9 |
- |
27260156 |
PANC0327 |
viability |
CTTTGTACAAGGCCTGCTAAAGG |
C9orf72 |
ENSG00000147894 |
0.20748769496229885 |
[631] |
[601,781,729,457] |
3 |
hSpCas9 |
negative selection |
7715437 |
27562448 |
27562471 |
9 |
- |
27260156 |
PANC0327 |
viability |
AGTATTATTCCAATGCTTACTGG |
C9orf72 |
ENSG00000147894 |
0.1336368590604089 |
[1132] |
[1298,1089,1053,990] |
2 |
hSpCas9 |
negative selection |
7715438 |
27562439 |
27562462 |
9 |
+ |
27260156 |
PANC0327 |
viability |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
0.5209043918025018 |
[705] |
[884,607,726,1414] |
7 |
hSpCas9 |
negative selection |
7779717 |
27566886 |
27566909 |
9 |
+ |
27260156 |
PANC0327 |
viability |
CACCACTCTCTGCATTTCGAAGG |
C9orf72 |
ENSG00000147894 |
0.24600384848355494 |
[192] |
[292,138,256,139] |
3 |
hSpCas9 |
negative selection |
7779718 |
27558536 |
27558559 |
9 |
+ |
27260156 |
PANC0327 |
viability |
TGATTCTGCTTCACATAACCTGG |
C9orf72 |
ENSG00000147894 |
0.09791666859712778 |
[976] |
[891,594,1003,1263] |
1 |
hSpCas9 |
negative selection |
7779719 |
27566789 |
27566812 |
9 |
- |
27260156 |
NCIH2009 |
viability |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.8103136838837874 |
[598] |
[1580,1668,1168] |
9 |
hSpCas9 |
negative selection |
7836687 |
27558490 |
27558513 |
9 |
- |
27260156 |
NCIH2009 |
viability |
CTTTGTACAAGGCCTGCTAAAGG |
C9orf72 |
ENSG00000147894 |
0.6373234343602796 |
[631] |
[1492,1685,956] |
8 |
hSpCas9 |
negative selection |
7836688 |
27562448 |
27562471 |
9 |
- |
27260156 |
NCIH2009 |
viability |
AGTATTATTCCAATGCTTACTGG |
C9orf72 |
ENSG00000147894 |
0.2576463011970711 |
[1132] |
[2127,1661,1934] |
3 |
hSpCas9 |
negative selection |
7836689 |
27562439 |
27562462 |
9 |
+ |
27260156 |
NCIH2009 |
viability |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
0.1431669868201909 |
[705] |
[1264,1021,1014] |
2 |
hSpCas9 |
negative selection |
7900968 |
27566886 |
27566909 |
9 |
+ |
27260156 |
NCIH2009 |
viability |
CACCACTCTCTGCATTTCGAAGG |
C9orf72 |
ENSG00000147894 |
0.05294194200427671 |
[192] |
[303,307,230] |
0 |
hSpCas9 |
negative selection |
7900969 |
27558536 |
27558559 |
9 |
+ |
27260156 |
NCIH2009 |
viability |
TGATTCTGCTTCACATAACCTGG |
C9orf72 |
ENSG00000147894 |
0.16447309947872069 |
[976] |
[1692,1486,1439] |
2 |
hSpCas9 |
negative selection |
7900970 |
27566789 |
27566812 |
9 |
- |
27260156 |
NCIH1373 |
viability |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.6661950433015182 |
[598] |
[1082,868,1261,278] |
6 |
hSpCas9 |
negative selection |
7957938 |
27558490 |
27558513 |
9 |
- |
27260156 |
NCIH1373 |
viability |
CTTTGTACAAGGCCTGCTAAAGG |
C9orf72 |
ENSG00000147894 |
0.5136220672329679 |
[631] |
[654,1402,859,269] |
5 |
hSpCas9 |
negative selection |
7957939 |
27562448 |
27562471 |
9 |
- |
27260156 |
NCIH1373 |
viability |
AGTATTATTCCAATGCTTACTGG |
C9orf72 |
ENSG00000147894 |
0.48005852824462036 |
[1132] |
[2059,1356,2030,448] |
5 |
hSpCas9 |
negative selection |
7957940 |
27562439 |
27562462 |
9 |
+ |
27260156 |
NCIH1373 |
viability |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
-0.15365959819254643 |
[705] |
[567,620,1042,152] |
-1 |
hSpCas9 |
negative selection |
8022219 |
27566886 |
27566909 |
9 |
+ |
27260156 |
NCIH1373 |
viability |
CACCACTCTCTGCATTTCGAAGG |
C9orf72 |
ENSG00000147894 |
0.9437916810559321 |
[192] |
[866,203,160,140] |
8 |
hSpCas9 |
negative selection |
8022220 |
27558536 |
27558559 |
9 |
+ |
27260156 |
NCIH1373 |
viability |
TGATTCTGCTTCACATAACCTGG |
C9orf72 |
ENSG00000147894 |
0.3599695843240662 |
[976] |
[1255,1340,1245,467] |
3 |
hSpCas9 |
negative selection |
8022221 |
27566789 |
27566812 |
9 |
- |
27260156 |
PATU8902 |
viability |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.6904087468652849 |
[598] |
[1576,758,1228,1900] |
7 |
hSpCas9 |
negative selection |
8079189 |
27558490 |
27558513 |
9 |
- |
27260156 |
PATU8902 |
viability |
CTTTGTACAAGGCCTGCTAAAGG |
C9orf72 |
ENSG00000147894 |
0.6356149190506761 |
[631] |
[1440,871,923,2465] |
6 |
hSpCas9 |
negative selection |
8079190 |
27562448 |
27562471 |
9 |
- |
27260156 |
PATU8902 |
viability |
AGTATTATTCCAATGCTTACTGG |
C9orf72 |
ENSG00000147894 |
0.5847446815911417 |
[1132] |
[2451,2896,1775,2490] |
6 |
hSpCas9 |
negative selection |
8079191 |
27562439 |
27562462 |
9 |
+ |
27260156 |
PATU8902 |
viability |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
-0.14783916233096073 |
[705] |
[759,673,1286,695] |
-1 |
hSpCas9 |
negative selection |
8143470 |
27566886 |
27566909 |
9 |
+ |
27260156 |
PATU8902 |
viability |
CACCACTCTCTGCATTTCGAAGG |
C9orf72 |
ENSG00000147894 |
1.000221709501973 |
[192] |
[413,597,424,767] |
9 |
hSpCas9 |
negative selection |
8143471 |
27558536 |
27558559 |
9 |
+ |
27260156 |
PATU8902 |
viability |
TGATTCTGCTTCACATAACCTGG |
C9orf72 |
ENSG00000147894 |
0.8243701044324967 |
[976] |
[2189,2162,2386,2950] |
8 |
hSpCas9 |
negative selection |
8143472 |
27566789 |
27566812 |
9 |
- |
27260156 |
PANC1 |
viability |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.4088532292775902 |
[598] |
[727,802,627,598] |
6 |
hSpCas9 |
negative selection |
8200440 |
27558490 |
27558513 |
9 |
- |
27260156 |
PANC1 |
viability |
CTTTGTACAAGGCCTGCTAAAGG |
C9orf72 |
ENSG00000147894 |
0.38547018384648385 |
[631] |
[771,986,616,532] |
6 |
hSpCas9 |
negative selection |
8200441 |
27562448 |
27562471 |
9 |
- |
27260156 |
PANC1 |
viability |
AGTATTATTCCAATGCTTACTGG |
C9orf72 |
ENSG00000147894 |
0.15670857143518657 |
[1132] |
[1162,1342,985,908] |
2 |
hSpCas9 |
negative selection |
8200442 |
27562439 |
27562462 |
9 |
+ |
27260156 |
PANC1 |
viability |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
-0.01323183792933147 |
[705] |
[582,775,517,558] |
0 |
hSpCas9 |
negative selection |
8264721 |
27566886 |
27566909 |
9 |
+ |
27260156 |
PANC1 |
viability |
CACCACTCTCTGCATTTCGAAGG |
C9orf72 |
ENSG00000147894 |
0.3521927597332325 |
[192] |
[398,161,158,122] |
6 |
hSpCas9 |
negative selection |
8264722 |
27558536 |
27558559 |
9 |
+ |
27260156 |
PANC1 |
viability |
TGATTCTGCTTCACATAACCTGG |
C9orf72 |
ENSG00000147894 |
0.22163842151371194 |
[976] |
[869,1345,648,1088] |
3 |
hSpCas9 |
negative selection |
8264723 |
27566789 |
27566812 |
9 |
- |
27260156 |
PANC0813 |
viability |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.43429806325689907 |
[598] |
[957,914,973,954] |
7 |
hSpCas9 |
negative selection |
8321691 |
27558490 |
27558513 |
9 |
- |
27260156 |
PANC0813 |
viability |
CTTTGTACAAGGCCTGCTAAAGG |
C9orf72 |
ENSG00000147894 |
0.3531104288897701 |
[631] |
[978,1021,969,829] |
6 |
hSpCas9 |
negative selection |
8321692 |
27562448 |
27562471 |
9 |
- |
27260156 |
PANC0813 |
viability |
AGTATTATTCCAATGCTTACTGG |
C9orf72 |
ENSG00000147894 |
0.23063762957258138 |
[1132] |
[1525,1582,1544,1584] |
4 |
hSpCas9 |
negative selection |
8321693 |
27562439 |
27562462 |
9 |
+ |
27260156 |
PANC0813 |
viability |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
0.05025855449622041 |
[705] |
[807,829,965,826] |
0 |
hSpCas9 |
negative selection |
8385972 |
27566886 |
27566909 |
9 |
+ |
27260156 |
PANC0813 |
viability |
CACCACTCTCTGCATTTCGAAGG |
C9orf72 |
ENSG00000147894 |
0.1660482581188032 |
[192] |
[347,128,346,204] |
2 |
hSpCas9 |
negative selection |
8385973 |
27558536 |
27558559 |
9 |
+ |
27260156 |
PANC0813 |
viability |
TGATTCTGCTTCACATAACCTGG |
C9orf72 |
ENSG00000147894 |
0.17456577380722416 |
[976] |
[1476,1463,1165,1098] |
3 |
hSpCas9 |
negative selection |
8385974 |
27566789 |
27566812 |
9 |
- |
27260156 |
RDES |
viability |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.08707822793065179 |
[598] |
[606,744,616,996] |
1 |
hSpCas9 |
negative selection |
8442942 |
27558490 |
27558513 |
9 |
- |
27260156 |
RDES |
viability |
CTTTGTACAAGGCCTGCTAAAGG |
C9orf72 |
ENSG00000147894 |
0.34758239011555353 |
[631] |
[791,903,937,1092] |
5 |
hSpCas9 |
negative selection |
8442943 |
27562448 |
27562471 |
9 |
- |
27260156 |
RDES |
viability |
AGTATTATTCCAATGCTTACTGG |
C9orf72 |
ENSG00000147894 |
0.39844826866686356 |
[1132] |
[1116,2044,1887,1903] |
6 |
hSpCas9 |
negative selection |
8442944 |
27562439 |
27562462 |
9 |
+ |
27260156 |
RDES |
viability |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
-0.08818912048701116 |
[705] |
[583,771,940,782] |
-1 |
hSpCas9 |
negative selection |
8507223 |
27566886 |
27566909 |
9 |
+ |
27260156 |
RDES |
viability |
CACCACTCTCTGCATTTCGAAGG |
C9orf72 |
ENSG00000147894 |
0.13098201791670094 |
[192] |
[241,210,186,339] |
2 |
hSpCas9 |
negative selection |
8507224 |
27558536 |
27558559 |
9 |
+ |
27260156 |
RDES |
viability |
TGATTCTGCTTCACATAACCTGG |
C9orf72 |
ENSG00000147894 |
0.14332562365998447 |
[976] |
[890,1140,1516,1517] |
2 |
hSpCas9 |
negative selection |
8507225 |
27566789 |
27566812 |
9 |
- |
27260156 |
PC3 |
viability |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.49866504777513426 |
[598] |
[557,883,1615,644] |
8 |
hSpCas9 |
negative selection |
8564193 |
27558490 |
27558513 |
9 |
- |
27260156 |
PC3 |
viability |
CTTTGTACAAGGCCTGCTAAAGG |
C9orf72 |
ENSG00000147894 |
0.2465926935577784 |
[631] |
[492,854,1207,635] |
5 |
hSpCas9 |
negative selection |
8564194 |
27562448 |
27562471 |
9 |
- |
27260156 |
PC3 |
viability |
AGTATTATTCCAATGCTTACTGG |
C9orf72 |
ENSG00000147894 |
0.03565575274447519 |
[1132] |
[729,1221,1841,1172] |
0 |
hSpCas9 |
negative selection |
8564195 |
27562439 |
27562462 |
9 |
+ |
27260156 |
PC3 |
viability |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
0.12007677085592294 |
[705] |
[379,882,1143,905] |
2 |
hSpCas9 |
negative selection |
8628474 |
27566886 |
27566909 |
9 |
+ |
27260156 |
PC3 |
viability |
CACCACTCTCTGCATTTCGAAGG |
C9orf72 |
ENSG00000147894 |
-0.7794107381679083 |
[192] |
[51,124,182,133] |
-9 |
hSpCas9 |
negative selection |
8628475 |
27558536 |
27558559 |
9 |
+ |
27260156 |
PC3 |
viability |
TGATTCTGCTTCACATAACCTGG |
C9orf72 |
ENSG00000147894 |
0.2671396869435101 |
[976] |
[701,1043,1859,1466] |
6 |
hSpCas9 |
negative selection |
8628476 |
27566789 |
27566812 |
9 |
- |
27260156 |
PATU8988T |
viability |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.4392297844376912 |
[598] |
[847,757,756,772] |
7 |
hSpCas9 |
negative selection |
8685444 |
27558490 |
27558513 |
9 |
- |
27260156 |
PATU8988T |
viability |
CTTTGTACAAGGCCTGCTAAAGG |
C9orf72 |
ENSG00000147894 |
0.23464378891633014 |
[631] |
[563,910,516,918] |
4 |
hSpCas9 |
negative selection |
8685445 |
27562448 |
27562471 |
9 |
- |
27260156 |
PATU8988T |
viability |
AGTATTATTCCAATGCTTACTGG |
C9orf72 |
ENSG00000147894 |
0.29349598722918824 |
[1132] |
[1044,1502,1382,1459] |
5 |
hSpCas9 |
negative selection |
8685446 |
27562439 |
27562462 |
9 |
+ |
27260156 |
PATU8988T |
viability |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
0.17883940021839306 |
[705] |
[924,761,716,676] |
3 |
hSpCas9 |
negative selection |
8749725 |
27566886 |
27566909 |
9 |
+ |
27260156 |
PATU8988T |
viability |
CACCACTCTCTGCATTTCGAAGG |
C9orf72 |
ENSG00000147894 |
0.412280078035546 |
[192] |
[221,224,273,270] |
7 |
hSpCas9 |
negative selection |
8749726 |
27558536 |
27558559 |
9 |
+ |
27260156 |
PATU8988T |
viability |
TGATTCTGCTTCACATAACCTGG |
C9orf72 |
ENSG00000147894 |
0.30440819934859764 |
[976] |
[1388,1306,1104,850] |
5 |
hSpCas9 |
negative selection |
8749727 |
27566789 |
27566812 |
9 |
- |
27260156 |
T47D |
viability |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.46800373084424113 |
[598] |
[918,839,1011,1103] |
8 |
hSpCas9 |
negative selection |
8806695 |
27558490 |
27558513 |
9 |
- |
27260156 |
T47D |
viability |
CTTTGTACAAGGCCTGCTAAAGG |
C9orf72 |
ENSG00000147894 |
0.42255880948971564 |
[631] |
[1068,882,1034,967] |
8 |
hSpCas9 |
negative selection |
8806696 |
27562448 |
27562471 |
9 |
- |
27260156 |
T47D |
viability |
AGTATTATTCCAATGCTTACTGG |
C9orf72 |
ENSG00000147894 |
0.13178061134310948 |
[1132] |
[1477,1314,1494,1508] |
3 |
hSpCas9 |
negative selection |
8806697 |
27562439 |
27562462 |
9 |
+ |
27260156 |
T47D |
viability |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
0.03620964924811987 |
[705] |
[879,776,809,914] |
0 |
hSpCas9 |
negative selection |
8870976 |
27566886 |
27566909 |
9 |
+ |
27260156 |
T47D |
viability |
CACCACTCTCTGCATTTCGAAGG |
C9orf72 |
ENSG00000147894 |
0.17980706862284745 |
[192] |
[208,249,224,337] |
4 |
hSpCas9 |
negative selection |
8870977 |
27558536 |
27558559 |
9 |
+ |
27260156 |
T47D |
viability |
TGATTCTGCTTCACATAACCTGG |
C9orf72 |
ENSG00000147894 |
0.26319728266645526 |
[976] |
[1659,1198,1194,1429] |
5 |
hSpCas9 |
negative selection |
8870978 |
27566789 |
27566812 |
9 |
- |
27260156 |
SU8686 |
viability |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.6168533320223228 |
[598] |
[979,787,889,999] |
8 |
hSpCas9 |
negative selection |
8927946 |
27558490 |
27558513 |
9 |
- |
27260156 |
SU8686 |
viability |
CTTTGTACAAGGCCTGCTAAAGG |
C9orf72 |
ENSG00000147894 |
0.3049742279441046 |
[631] |
[778,676,821,835] |
5 |
hSpCas9 |
negative selection |
8927947 |
27562448 |
27562471 |
9 |
- |
27260156 |
SU8686 |
viability |
AGTATTATTCCAATGCTTACTGG |
C9orf72 |
ENSG00000147894 |
0.37360566751118185 |
[1132] |
[1382,1169,1473,1901] |
6 |
hSpCas9 |
negative selection |
8927948 |
27562439 |
27562462 |
9 |
+ |
27260156 |
SU8686 |
viability |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
0.18732228966188447 |
[705] |
[760,718,734,1014] |
3 |
hSpCas9 |
negative selection |
8992227 |
27566886 |
27566909 |
9 |
+ |
27260156 |
SU8686 |
viability |
CACCACTCTCTGCATTTCGAAGG |
C9orf72 |
ENSG00000147894 |
-0.0318165252461855 |
[192] |
[202,156,182,209] |
0 |
hSpCas9 |
negative selection |
8992228 |
27558536 |
27558559 |
9 |
+ |
27260156 |
SU8686 |
viability |
TGATTCTGCTTCACATAACCTGG |
C9orf72 |
ENSG00000147894 |
0.3699087240406964 |
[976] |
[1083,1070,1527,1386] |
6 |
hSpCas9 |
negative selection |
8992229 |
27566789 |
27566812 |
9 |
- |
27260156 |
SKES1 |
viability |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.4191053261367303 |
[598] |
[1099,821,580,738] |
8 |
hSpCas9 |
negative selection |
9049197 |
27558490 |
27558513 |
9 |
- |
27260156 |
SKES1 |
viability |
CTTTGTACAAGGCCTGCTAAAGG |
C9orf72 |
ENSG00000147894 |
0.5104891903265154 |
[631] |
[806,1084,721,971] |
8 |
hSpCas9 |
negative selection |
9049198 |
27562448 |
27562471 |
9 |
- |
27260156 |
SKES1 |
viability |
AGTATTATTCCAATGCTTACTGG |
C9orf72 |
ENSG00000147894 |
0.041485182465787585 |
[1132] |
[1424,1296,1129,875] |
0 |
hSpCas9 |
negative selection |
9049199 |
27562439 |
27562462 |
9 |
+ |
27260156 |
SKES1 |
viability |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
-0.008896048918429766 |
[705] |
[680,713,619,768] |
0 |
hSpCas9 |
negative selection |
9113478 |
27566886 |
27566909 |
9 |
+ |
27260156 |
SKES1 |
viability |
CACCACTCTCTGCATTTCGAAGG |
C9orf72 |
ENSG00000147894 |
-0.5107631492829126 |
[192] |
[104,200,109,127] |
-8 |
hSpCas9 |
negative selection |
9113479 |
27558536 |
27558559 |
9 |
+ |
27260156 |
SKES1 |
viability |
TGATTCTGCTTCACATAACCTGG |
C9orf72 |
ENSG00000147894 |
0.3434676452402863 |
[976] |
[1485,1446,1083,1005] |
7 |
hSpCas9 |
negative selection |
9113480 |
27566789 |
27566812 |
9 |
- |
27260156 |
TOV112D |
viability |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.11544968383965948 |
[598] |
[695,1040,322,638] |
2 |
hSpCas9 |
negative selection |
9170448 |
27558490 |
27558513 |
9 |
- |
27260156 |
TOV112D |
viability |
CTTTGTACAAGGCCTGCTAAAGG |
C9orf72 |
ENSG00000147894 |
0.3709391562788979 |
[631] |
[711,1350,695,640] |
7 |
hSpCas9 |
negative selection |
9170449 |
27562448 |
27562471 |
9 |
- |
27260156 |
TOV112D |
viability |
AGTATTATTCCAATGCTTACTGG |
C9orf72 |
ENSG00000147894 |
0.24191754243148766 |
[1132] |
[1599,1492,1120,1213] |
4 |
hSpCas9 |
negative selection |
9170450 |
27562439 |
27562462 |
9 |
+ |
27260156 |
TOV112D |
viability |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
-0.03691108490096251 |
[705] |
[805,796,675,517] |
0 |
hSpCas9 |
negative selection |
9234729 |
27566886 |
27566909 |
9 |
+ |
27260156 |
TOV112D |
viability |
CACCACTCTCTGCATTTCGAAGG |
C9orf72 |
ENSG00000147894 |
-0.022320488632513014 |
[192] |
[275,274,117,121] |
0 |
hSpCas9 |
negative selection |
9234730 |
27558536 |
27558559 |
9 |
+ |
27260156 |
TOV112D |
viability |
TGATTCTGCTTCACATAACCTGG |
C9orf72 |
ENSG00000147894 |
0.4576382362085021 |
[976] |
[1222,1677,1272,1272] |
8 |
hSpCas9 |
negative selection |
9234731 |
27566789 |
27566812 |
9 |
- |
27260156 |
TC71 |
viability |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.20427323003306547 |
[598] |
[698,748,699,817] |
5 |
hSpCas9 |
negative selection |
9291699 |
27558490 |
27558513 |
9 |
- |
27260156 |
TC71 |
viability |
CTTTGTACAAGGCCTGCTAAAGG |
C9orf72 |
ENSG00000147894 |
0.41964534755038513 |
[631] |
[971,914,867,866] |
8 |
hSpCas9 |
negative selection |
9291700 |
27562448 |
27562471 |
9 |
- |
27260156 |
TC71 |
viability |
AGTATTATTCCAATGCTTACTGG |
C9orf72 |
ENSG00000147894 |
0.0292135371049711 |
[1132] |
[1164,1183,1244,1372] |
0 |
hSpCas9 |
negative selection |
9291701 |
27562439 |
27562462 |
9 |
+ |
27260156 |
TC71 |
viability |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
-0.0027436283692996444 |
[705] |
[671,700,738,921] |
0 |
hSpCas9 |
negative selection |
9355980 |
27566886 |
27566909 |
9 |
+ |
27260156 |
TC71 |
viability |
CACCACTCTCTGCATTTCGAAGG |
C9orf72 |
ENSG00000147894 |
0.1262867536492569 |
[192] |
[216,297,148,242] |
3 |
hSpCas9 |
negative selection |
9355981 |
27558536 |
27558559 |
9 |
+ |
27260156 |
TC71 |
viability |
TGATTCTGCTTCACATAACCTGG |
C9orf72 |
ENSG00000147894 |
0.19391934182680437 |
[976] |
[1023,1330,1083,1370] |
5 |
hSpCas9 |
negative selection |
9355982 |
27566789 |
27566812 |
9 |
- |
27260156 |
TC32 |
viability |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.10418792560101847 |
[598] |
[588,384,693,830] |
2 |
hSpCas9 |
negative selection |
9412950 |
27558490 |
27558513 |
9 |
- |
27260156 |
TC32 |
viability |
CTTTGTACAAGGCCTGCTAAAGG |
C9orf72 |
ENSG00000147894 |
0.46432999152563553 |
[631] |
[868,575,1101,815] |
7 |
hSpCas9 |
negative selection |
9412951 |
27562448 |
27562471 |
9 |
- |
27260156 |
TC32 |
viability |
AGTATTATTCCAATGCTTACTGG |
C9orf72 |
ENSG00000147894 |
0.06473072674939084 |
[1132] |
[967,941,1479,1144] |
1 |
hSpCas9 |
negative selection |
9412952 |
27562439 |
27562462 |
9 |
+ |
27260156 |
TC32 |
viability |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
-0.07873293721916763 |
[705] |
[683,531,712,584] |
-1 |
hSpCas9 |
negative selection |
9477231 |
27566886 |
27566909 |
9 |
+ |
27260156 |
TC32 |
viability |
CACCACTCTCTGCATTTCGAAGG |
C9orf72 |
ENSG00000147894 |
0.129298589422419 |
[192] |
[176,199,237,172] |
2 |
hSpCas9 |
negative selection |
9477232 |
27558536 |
27558559 |
9 |
+ |
27260156 |
TC32 |
viability |
TGATTCTGCTTCACATAACCTGG |
C9orf72 |
ENSG00000147894 |
0.2522867428788058 |
[976] |
[826,978,1308,1319] |
4 |
hSpCas9 |
negative selection |
9477233 |
27560242 |
27560265 |
9 |
+ |
27869803 |
HPAFII |
viability after 27 days |
TGCACTGCTACCTACTACAACGG |
C9orf72 |
ENSG00000147894 |
0.6250022543792737 |
[849] |
[788,605,NaN] |
5 |
hSpCas9 |
negative selection |
9605699 |
27566888 |
27566911 |
9 |
- |
27869803 |
HPAFII |
viability after 27 days |
ATCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
0.644996571389457 |
[230] |
[238,148,NaN] |
5 |
hSpCas9 |
negative selection |
9605700 |
27560242 |
27560265 |
9 |
+ |
27869803 |
HPAFII |
viability after 15 days |
TGCACTGCTACCTACTACAACGG |
C9orf72 |
ENSG00000147894 |
0.024702345706251405 |
[849] |
[1244,732,NaN] |
0 |
hSpCas9 |
negative selection |
9688148 |
27566888 |
27566911 |
9 |
- |
27869803 |
HPAFII |
viability after 15 days |
ATCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
-0.6301357868054422 |
[230] |
[226,118,NaN] |
-6 |
hSpCas9 |
negative selection |
9688149 |
27560242 |
27560265 |
9 |
+ |
27869803 |
ASPC1 |
viability after 36 days |
TGCACTGCTACCTACTACAACGG |
C9orf72 |
ENSG00000147894 |
0.22112549982787844 |
[1627] |
[550,894,548] |
2 |
hSpCas9 |
negative selection |
9770597 |
27566888 |
27566911 |
9 |
- |
27869803 |
ASPC1 |
viability after 36 days |
ATCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
-0.8685784430247289 |
[623] |
[190,89,90] |
-7 |
hSpCas9 |
negative selection |
9770598 |
27560242 |
27560265 |
9 |
+ |
27869803 |
PATU8988S |
viability after 35 days |
TGCACTGCTACCTACTACAACGG |
C9orf72 |
ENSG00000147894 |
-0.09663482737368345 |
[1719] |
[581,713,NaN] |
-1 |
hSpCas9 |
negative selection |
9853046 |
27566888 |
27566911 |
9 |
- |
27869803 |
PATU8988S |
viability after 35 days |
ATCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
-0.03702328400238497 |
[356] |
[200,78,NaN] |
0 |
hSpCas9 |
negative selection |
9853047 |
27560242 |
27560265 |
9 |
+ |
27869803 |
PATU8988S |
viability after 31 days |
TGCACTGCTACCTACTACAACGG |
C9orf72 |
ENSG00000147894 |
0.10405701812737522 |
[1719] |
[609,898,NaN] |
1 |
hSpCas9 |
negative selection |
9935495 |
27566888 |
27566911 |
9 |
- |
27869803 |
PATU8988S |
viability after 31 days |
ATCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
0.25621256268954645 |
[356] |
[246,71,NaN] |
3 |
hSpCas9 |
negative selection |
9935496 |
27560242 |
27560265 |
9 |
+ |
27869803 |
HPAFII |
viability after 35 days |
TGCACTGCTACCTACTACAACGG |
C9orf72 |
ENSG00000147894 |
0.6160632183473205 |
[849] |
[659,658,NaN] |
4 |
hSpCas9 |
negative selection |
10017944 |
27566888 |
27566911 |
9 |
- |
27869803 |
HPAFII |
viability after 35 days |
ATCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
0.4268839751334526 |
[230] |
[223,81,NaN] |
2 |
hSpCas9 |
negative selection |
10017945 |
27560242 |
27560265 |
9 |
+ |
27869803 |
HPAFII |
viability after 31 days |
TGCACTGCTACCTACTACAACGG |
C9orf72 |
ENSG00000147894 |
0.40065484785299454 |
[849] |
[634,623,NaN] |
3 |
hSpCas9 |
negative selection |
10100393 |
27566888 |
27566911 |
9 |
- |
27869803 |
HPAFII |
viability after 31 days |
ATCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
0.2692026282318101 |
[230] |
[194,113,NaN] |
2 |
hSpCas9 |
negative selection |
10100394 |
27567083 |
27567106 |
9 |
+ |
28162770 |
P31FUJ |
viability |
GCAACAGCTGGAGATGGCGGTGG |
C9orf72 |
ENSG00000147894 |
0.17485576449886764 |
[146] |
[194] |
1 |
hSpCas9 |
negative selection |
10124478 |
27566789 |
27566812 |
9 |
- |
28162770 |
P31FUJ |
viability |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.71479390954775 |
[840] |
[1621] |
7 |
hSpCas9 |
negative selection |
10124479 |
27566951 |
27566974 |
9 |
- |
28162770 |
P31FUJ |
viability |
GAACAGGTACTTCTCAGTGATGG |
C9orf72 |
ENSG00000147894 |
-0.16890858781575185 |
[264] |
[276] |
-2 |
hSpCas9 |
negative selection |
10124480 |
27566907 |
27566930 |
9 |
+ |
28162770 |
P31FUJ |
viability |
GGATTTCTCCATTTAGAGTGTGG |
C9orf72 |
ENSG00000147894 |
0.1468710091121589 |
[381] |
[496] |
1 |
hSpCas9 |
negative selection |
10124481 |
27566723 |
27566746 |
9 |
+ |
28162770 |
P31FUJ |
viability |
TCAACACACACTCTATGAAGTGG |
C9orf72 |
ENSG00000147894 |
-0.30421653770654117 |
[351] |
[334] |
-3 |
hSpCas9 |
negative selection |
10124482 |
27562439 |
27562462 |
9 |
+ |
28162770 |
P31FUJ |
viability |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
0.5668274245339985 |
[427] |
[744] |
6 |
hSpCas9 |
negative selection |
10124483 |
27566888 |
27566911 |
9 |
- |
28162770 |
P31FUJ |
viability |
ATCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
0.49323382959356843 |
[317] |
[525] |
5 |
hSpCas9 |
negative selection |
10124484 |
27566967 |
27566990 |
9 |
- |
28162770 |
P31FUJ |
viability |
TTGGGCTCCAAAGACAGAACAGG |
C9orf72 |
ENSG00000147894 |
0.409771019476873 |
[179] |
[280] |
4 |
hSpCas9 |
negative selection |
10124485 |
27561597 |
27561620 |
9 |
- |
28162770 |
P31FUJ |
viability |
ATTGGTGACAGCTGTCATGAAGG |
C9orf72 |
ENSG00000147894 |
1.9960164860815026 |
[15] |
[74] |
9 |
hSpCas9 |
negative selection |
10124486 |
27566805 |
27566828 |
9 |
- |
28162770 |
P31FUJ |
viability |
CTTTGATGGAAACTGGAATGGGG |
C9orf72 |
ENSG00000147894 |
0.6237148686790206 |
[543] |
[984] |
7 |
hSpCas9 |
negative selection |
10124487 |
27567083 |
27567106 |
9 |
+ |
28162770 |
TF1 |
viability |
GCAACAGCTGGAGATGGCGGTGG |
C9orf72 |
ENSG00000147894 |
NaN |
[NaN] |
[35] |
1 |
hSpCas9 |
negative selection |
10293844 |
27566789 |
27566812 |
9 |
- |
28162770 |
TF1 |
viability |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
NaN |
[NaN] |
[1265] |
1 |
hSpCas9 |
negative selection |
10293845 |
27566951 |
27566974 |
9 |
- |
28162770 |
TF1 |
viability |
GAACAGGTACTTCTCAGTGATGG |
C9orf72 |
ENSG00000147894 |
NaN |
[NaN] |
[85] |
1 |
hSpCas9 |
negative selection |
10293846 |
27566907 |
27566930 |
9 |
+ |
28162770 |
TF1 |
viability |
GGATTTCTCCATTTAGAGTGTGG |
C9orf72 |
ENSG00000147894 |
NaN |
[NaN] |
[595] |
1 |
hSpCas9 |
negative selection |
10293847 |
27566723 |
27566746 |
9 |
+ |
28162770 |
TF1 |
viability |
TCAACACACACTCTATGAAGTGG |
C9orf72 |
ENSG00000147894 |
NaN |
[NaN] |
[358] |
1 |
hSpCas9 |
negative selection |
10293848 |
27562439 |
27562462 |
9 |
+ |
28162770 |
TF1 |
viability |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
NaN |
[NaN] |
[481] |
1 |
hSpCas9 |
negative selection |
10293849 |
27566888 |
27566911 |
9 |
- |
28162770 |
TF1 |
viability |
ATCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
NaN |
[NaN] |
[675] |
1 |
hSpCas9 |
negative selection |
10293850 |
27566967 |
27566990 |
9 |
- |
28162770 |
TF1 |
viability |
TTGGGCTCCAAAGACAGAACAGG |
C9orf72 |
ENSG00000147894 |
NaN |
[NaN] |
[123] |
1 |
hSpCas9 |
negative selection |
10293851 |
27561597 |
27561620 |
9 |
- |
28162770 |
TF1 |
viability |
ATTGGTGACAGCTGTCATGAAGG |
C9orf72 |
ENSG00000147894 |
NaN |
[NaN] |
[39] |
1 |
hSpCas9 |
negative selection |
10293852 |
27566805 |
27566828 |
9 |
- |
28162770 |
TF1 |
viability |
CTTTGATGGAAACTGGAATGGGG |
C9orf72 |
ENSG00000147894 |
NaN |
[NaN] |
[519] |
1 |
hSpCas9 |
negative selection |
10293853 |
27567083 |
27567106 |
9 |
+ |
28162770 |
SKM1 |
viability |
GCAACAGCTGGAGATGGCGGTGG |
C9orf72 |
ENSG00000147894 |
-1.0443941193584534 |
[41] |
[35] |
-6 |
hSpCas9 |
negative selection |
10463210 |
27566789 |
27566812 |
9 |
- |
28162770 |
SKM1 |
viability |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.6911208009390277 |
[198] |
[567] |
6 |
hSpCas9 |
negative selection |
10463211 |
27566951 |
27566974 |
9 |
- |
28162770 |
SKM1 |
viability |
GAACAGGTACTTCTCAGTGATGG |
C9orf72 |
ENSG00000147894 |
-0.0823913826002356 |
[108] |
[181] |
0 |
hSpCas9 |
negative selection |
10463212 |
27566907 |
27566930 |
9 |
+ |
28162770 |
SKM1 |
viability |
GGATTTCTCCATTTAGAGTGTGG |
C9orf72 |
ENSG00000147894 |
0.6908110169433153 |
[122] |
[350] |
6 |
hSpCas9 |
negative selection |
10463213 |
27566723 |
27566746 |
9 |
+ |
28162770 |
SKM1 |
viability |
TCAACACACACTCTATGAAGTGG |
C9orf72 |
ENSG00000147894 |
-0.06835736270916903 |
[85] |
[144] |
0 |
hSpCas9 |
negative selection |
10463214 |
27562439 |
27562462 |
9 |
+ |
28162770 |
SKM1 |
viability |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
0.17379831344870866 |
[171] |
[342] |
1 |
hSpCas9 |
negative selection |
10463215 |
27566888 |
27566911 |
9 |
- |
28162770 |
SKM1 |
viability |
ATCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
0.3557854211932775 |
[60] |
[137] |
3 |
hSpCas9 |
negative selection |
10463216 |
27566967 |
27566990 |
9 |
- |
28162770 |
SKM1 |
viability |
TTGGGCTCCAAAGACAGAACAGG |
C9orf72 |
ENSG00000147894 |
0.48465964021204627 |
[37] |
[93] |
5 |
hSpCas9 |
negative selection |
10463217 |
27561597 |
27561620 |
9 |
- |
28162770 |
SKM1 |
viability |
ATTGGTGACAGCTGTCATGAAGG |
C9orf72 |
ENSG00000147894 |
-2.991926699464318 |
[8] |
[1] |
-9 |
hSpCas9 |
negative selection |
10463218 |
27566805 |
27566828 |
9 |
- |
28162770 |
SKM1 |
viability |
CTTTGATGGAAACTGGAATGGGG |
C9orf72 |
ENSG00000147894 |
0.6100361537830405 |
[115] |
[312] |
6 |
hSpCas9 |
negative selection |
10463219 |
27567083 |
27567106 |
9 |
+ |
28162770 |
SKM1 |
viability |
GCAACAGCTGGAGATGGCGGTGG |
C9orf72 |
ENSG00000147894 |
-1.0443941193584534 |
[41] |
[35] |
-6 |
hSpCas9 |
negative selection |
10632576 |
27566789 |
27566812 |
9 |
- |
28162770 |
SKM1 |
viability |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.6911208009390277 |
[198] |
[567] |
6 |
hSpCas9 |
negative selection |
10632577 |
27566951 |
27566974 |
9 |
- |
28162770 |
SKM1 |
viability |
GAACAGGTACTTCTCAGTGATGG |
C9orf72 |
ENSG00000147894 |
-0.0823913826002356 |
[108] |
[181] |
0 |
hSpCas9 |
negative selection |
10632578 |
27566907 |
27566930 |
9 |
+ |
28162770 |
SKM1 |
viability |
GGATTTCTCCATTTAGAGTGTGG |
C9orf72 |
ENSG00000147894 |
0.6908110169433153 |
[122] |
[350] |
6 |
hSpCas9 |
negative selection |
10632579 |
27566723 |
27566746 |
9 |
+ |
28162770 |
SKM1 |
viability |
TCAACACACACTCTATGAAGTGG |
C9orf72 |
ENSG00000147894 |
-0.06835736270916903 |
[85] |
[144] |
0 |
hSpCas9 |
negative selection |
10632580 |
27562439 |
27562462 |
9 |
+ |
28162770 |
SKM1 |
viability |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
0.17379831344870866 |
[171] |
[342] |
1 |
hSpCas9 |
negative selection |
10632581 |
27566888 |
27566911 |
9 |
- |
28162770 |
SKM1 |
viability |
ATCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
0.3557854211932775 |
[60] |
[137] |
3 |
hSpCas9 |
negative selection |
10632582 |
27566967 |
27566990 |
9 |
- |
28162770 |
SKM1 |
viability |
TTGGGCTCCAAAGACAGAACAGG |
C9orf72 |
ENSG00000147894 |
0.48465964021204627 |
[37] |
[93] |
5 |
hSpCas9 |
negative selection |
10632583 |
27561597 |
27561620 |
9 |
- |
28162770 |
SKM1 |
viability |
ATTGGTGACAGCTGTCATGAAGG |
C9orf72 |
ENSG00000147894 |
-2.991926699464318 |
[8] |
[1] |
-9 |
hSpCas9 |
negative selection |
10632584 |
27566805 |
27566828 |
9 |
- |
28162770 |
SKM1 |
viability |
CTTTGATGGAAACTGGAATGGGG |
C9orf72 |
ENSG00000147894 |
0.6100361537830405 |
[115] |
[312] |
6 |
hSpCas9 |
negative selection |
10632585 |
27567083 |
27567106 |
9 |
+ |
28162770 |
PL21 |
viability |
GCAACAGCTGGAGATGGCGGTGG |
C9orf72 |
ENSG00000147894 |
-1.1921778082894403 |
[188] |
[35] |
-7 |
hSpCas9 |
negative selection |
10801942 |
27566789 |
27566812 |
9 |
- |
28162770 |
PL21 |
viability |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.4355176774202487 |
[631] |
[371] |
4 |
hSpCas9 |
negative selection |
10801943 |
27566951 |
27566974 |
9 |
- |
28162770 |
PL21 |
viability |
GAACAGGTACTTCTCAGTGATGG |
C9orf72 |
ENSG00000147894 |
0.871258758960191 |
[259] |
[206] |
7 |
hSpCas9 |
negative selection |
10801944 |
27566907 |
27566930 |
9 |
+ |
28162770 |
PL21 |
viability |
GGATTTCTCCATTTAGAGTGTGG |
C9orf72 |
ENSG00000147894 |
-0.03662109713536488 |
[369] |
[156] |
0 |
hSpCas9 |
negative selection |
10801945 |
27566723 |
27566746 |
9 |
+ |
28162770 |
PL21 |
viability |
TCAACACACACTCTATGAAGTGG |
C9orf72 |
ENSG00000147894 |
-0.6108265611206627 |
[399] |
[113] |
-4 |
hSpCas9 |
negative selection |
10801946 |
27562439 |
27562462 |
9 |
+ |
28162770 |
PL21 |
viability |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
-0.1970077258936347 |
[560] |
[212] |
-1 |
hSpCas9 |
negative selection |
10801947 |
27566888 |
27566911 |
9 |
- |
28162770 |
PL21 |
viability |
ATCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
-0.07701861027801982 |
[348] |
[143] |
0 |
hSpCas9 |
negative selection |
10801948 |
27566967 |
27566990 |
9 |
- |
28162770 |
PL21 |
viability |
TTGGGCTCCAAAGACAGAACAGG |
C9orf72 |
ENSG00000147894 |
1.538009253245704 |
[71] |
[90] |
9 |
hSpCas9 |
negative selection |
10801949 |
27561597 |
27561620 |
9 |
- |
28162770 |
PL21 |
viability |
ATTGGTGACAGCTGTCATGAAGG |
C9orf72 |
ENSG00000147894 |
-2.323422341567693 |
[22] |
[1] |
-8 |
hSpCas9 |
negative selection |
10801950 |
27566805 |
27566828 |
9 |
- |
28162770 |
PL21 |
viability |
CTTTGATGGAAACTGGAATGGGG |
C9orf72 |
ENSG00000147894 |
1.2211399131018723 |
[340] |
[345] |
8 |
hSpCas9 |
negative selection |
10801951 |
27567083 |
27567106 |
9 |
+ |
28162770 |
P31FUJ |
viability |
GCAACAGCTGGAGATGGCGGTGG |
C9orf72 |
ENSG00000147894 |
0.17485576449886764 |
[146] |
[194] |
1 |
hSpCas9 |
negative selection |
10971308 |
27566789 |
27566812 |
9 |
- |
28162770 |
P31FUJ |
viability |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.71479390954775 |
[840] |
[1621] |
7 |
hSpCas9 |
negative selection |
10971309 |
27566951 |
27566974 |
9 |
- |
28162770 |
P31FUJ |
viability |
GAACAGGTACTTCTCAGTGATGG |
C9orf72 |
ENSG00000147894 |
-0.16890858781575185 |
[264] |
[276] |
-2 |
hSpCas9 |
negative selection |
10971310 |
27566907 |
27566930 |
9 |
+ |
28162770 |
P31FUJ |
viability |
GGATTTCTCCATTTAGAGTGTGG |
C9orf72 |
ENSG00000147894 |
0.1468710091121589 |
[381] |
[496] |
1 |
hSpCas9 |
negative selection |
10971311 |
27566723 |
27566746 |
9 |
+ |
28162770 |
P31FUJ |
viability |
TCAACACACACTCTATGAAGTGG |
C9orf72 |
ENSG00000147894 |
-0.30421653770654117 |
[351] |
[334] |
-3 |
hSpCas9 |
negative selection |
10971312 |
27562439 |
27562462 |
9 |
+ |
28162770 |
P31FUJ |
viability |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
0.5668274245339985 |
[427] |
[744] |
6 |
hSpCas9 |
negative selection |
10971313 |
27566888 |
27566911 |
9 |
- |
28162770 |
P31FUJ |
viability |
ATCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
0.49323382959356843 |
[317] |
[525] |
5 |
hSpCas9 |
negative selection |
10971314 |
27566967 |
27566990 |
9 |
- |
28162770 |
P31FUJ |
viability |
TTGGGCTCCAAAGACAGAACAGG |
C9orf72 |
ENSG00000147894 |
0.409771019476873 |
[179] |
[280] |
4 |
hSpCas9 |
negative selection |
10971315 |
27561597 |
27561620 |
9 |
- |
28162770 |
P31FUJ |
viability |
ATTGGTGACAGCTGTCATGAAGG |
C9orf72 |
ENSG00000147894 |
1.9960164860815026 |
[15] |
[74] |
9 |
hSpCas9 |
negative selection |
10971316 |
27566805 |
27566828 |
9 |
- |
28162770 |
P31FUJ |
viability |
CTTTGATGGAAACTGGAATGGGG |
C9orf72 |
ENSG00000147894 |
0.6237148686790206 |
[543] |
[984] |
7 |
hSpCas9 |
negative selection |
10971317 |
27567083 |
27567106 |
9 |
+ |
28162770 |
OCIAML5 |
viability |
GCAACAGCTGGAGATGGCGGTGG |
C9orf72 |
ENSG00000147894 |
-0.19155303713566402 |
[92] |
[146] |
-1 |
hSpCas9 |
negative selection |
11140674 |
27566789 |
27566812 |
9 |
- |
28162770 |
OCIAML5 |
viability |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.48964663670143804 |
[448] |
[1137] |
4 |
hSpCas9 |
negative selection |
11140675 |
27566951 |
27566974 |
9 |
- |
28162770 |
OCIAML5 |
viability |
GAACAGGTACTTCTCAGTGATGG |
C9orf72 |
ENSG00000147894 |
0.7492439239446429 |
[116] |
[354] |
6 |
hSpCas9 |
negative selection |
11140676 |
27566907 |
27566930 |
9 |
+ |
28162770 |
OCIAML5 |
viability |
GGATTTCTCCATTTAGAGTGTGG |
C9orf72 |
ENSG00000147894 |
0.16807107470707905 |
[248] |
[504] |
1 |
hSpCas9 |
negative selection |
11140677 |
27566723 |
27566746 |
9 |
+ |
28162770 |
OCIAML5 |
viability |
TCAACACACACTCTATGAAGTGG |
C9orf72 |
ENSG00000147894 |
-0.696916922102083 |
[228] |
[254] |
-4 |
hSpCas9 |
negative selection |
11140678 |
27562439 |
27562462 |
9 |
+ |
28162770 |
OCIAML5 |
viability |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
0.5430896531889702 |
[410] |
[1080] |
5 |
hSpCas9 |
negative selection |
11140679 |
27566888 |
27566911 |
9 |
- |
28162770 |
OCIAML5 |
viability |
ATCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
0.6316488740878998 |
[240] |
[673] |
5 |
hSpCas9 |
negative selection |
11140680 |
27566967 |
27566990 |
9 |
- |
28162770 |
OCIAML5 |
viability |
TTGGGCTCCAAAGACAGAACAGG |
C9orf72 |
ENSG00000147894 |
0.7125041410259813 |
[94] |
[280] |
6 |
hSpCas9 |
negative selection |
11140681 |
27561597 |
27561620 |
9 |
- |
28162770 |
OCIAML5 |
viability |
ATTGGTGACAGCTGTCATGAAGG |
C9orf72 |
ENSG00000147894 |
-3.37562852692101 |
[22] |
[3] |
-9 |
hSpCas9 |
negative selection |
11140682 |
27566805 |
27566828 |
9 |
- |
28162770 |
OCIAML5 |
viability |
CTTTGATGGAAACTGGAATGGGG |
C9orf72 |
ENSG00000147894 |
0.9298283662026534 |
[293] |
[1010] |
7 |
hSpCas9 |
negative selection |
11140683 |
27567083 |
27567106 |
9 |
+ |
28162770 |
EOL1 |
viability |
GCAACAGCTGGAGATGGCGGTGG |
C9orf72 |
ENSG00000147894 |
-0.7363635823839201 |
[233] |
[73] |
-5 |
hSpCas9 |
negative selection |
11310040 |
27566789 |
27566812 |
9 |
- |
28162770 |
EOL1 |
viability |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.5526821064332641 |
[822] |
[635] |
5 |
hSpCas9 |
negative selection |
11310041 |
27566951 |
27566974 |
9 |
- |
28162770 |
EOL1 |
viability |
GAACAGGTACTTCTCAGTGATGG |
C9orf72 |
ENSG00000147894 |
0.17856530404689486 |
[534] |
[318] |
1 |
hSpCas9 |
negative selection |
11310042 |
27566907 |
27566930 |
9 |
+ |
28162770 |
EOL1 |
viability |
GGATTTCTCCATTTAGAGTGTGG |
C9orf72 |
ENSG00000147894 |
0.665396800223969 |
[741] |
[619] |
6 |
hSpCas9 |
negative selection |
11310043 |
27566723 |
27566746 |
9 |
+ |
28162770 |
EOL1 |
viability |
TCAACACACACTCTATGAAGTGG |
C9orf72 |
ENSG00000147894 |
0.8383153739264558 |
[585] |
[551] |
7 |
hSpCas9 |
negative selection |
11310044 |
27562439 |
27562462 |
9 |
+ |
28162770 |
EOL1 |
viability |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
0.0870052226527509 |
[989] |
[553] |
0 |
hSpCas9 |
negative selection |
11310045 |
27566888 |
27566911 |
9 |
- |
28162770 |
EOL1 |
viability |
ATCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
0.5775587553113564 |
[420] |
[330] |
5 |
hSpCas9 |
negative selection |
11310046 |
27566967 |
27566990 |
9 |
- |
28162770 |
EOL1 |
viability |
TTGGGCTCCAAAGACAGAACAGG |
C9orf72 |
ENSG00000147894 |
-0.8574515762101751 |
[140] |
[40] |
-5 |
hSpCas9 |
negative selection |
11310047 |
27561597 |
27561620 |
9 |
- |
28162770 |
EOL1 |
viability |
ATTGGTGACAGCTGTCATGAAGG |
C9orf72 |
ENSG00000147894 |
0.07655086501558461 |
[26] |
[14] |
0 |
hSpCas9 |
negative selection |
11310048 |
27566805 |
27566828 |
9 |
- |
28162770 |
EOL1 |
viability |
CTTTGATGGAAACTGGAATGGGG |
C9orf72 |
ENSG00000147894 |
0.5327575532708329 |
[512] |
[390] |
5 |
hSpCas9 |
negative selection |
11310049 |
27567083 |
27567106 |
9 |
+ |
28162770 |
MOLM13 |
viability |
GCAACAGCTGGAGATGGCGGTGG |
C9orf72 |
ENSG00000147894 |
1.3580661035918276 |
[190] |
[353] |
9 |
hSpCas9 |
negative selection |
11479406 |
27566789 |
27566812 |
9 |
- |
28162770 |
MOLM13 |
viability |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.28955214028606635 |
[902] |
[797] |
2 |
hSpCas9 |
negative selection |
11479407 |
27566951 |
27566974 |
9 |
- |
28162770 |
MOLM13 |
viability |
GAACAGGTACTTCTCAGTGATGG |
C9orf72 |
ENSG00000147894 |
0.03602725962437603 |
[459] |
[340] |
0 |
hSpCas9 |
negative selection |
11479408 |
27566907 |
27566930 |
9 |
+ |
28162770 |
MOLM13 |
viability |
GGATTTCTCCATTTAGAGTGTGG |
C9orf72 |
ENSG00000147894 |
0.43628738415875 |
[599] |
[586] |
3 |
hSpCas9 |
negative selection |
11479409 |
27566723 |
27566746 |
9 |
+ |
28162770 |
MOLM13 |
viability |
TCAACACACACTCTATGAAGTGG |
C9orf72 |
ENSG00000147894 |
0.18437851332052047 |
[666] |
[547] |
1 |
hSpCas9 |
negative selection |
11479410 |
27562439 |
27562462 |
9 |
+ |
28162770 |
MOLM13 |
viability |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
0.3705921801896639 |
[827] |
[773] |
2 |
hSpCas9 |
negative selection |
11479411 |
27566888 |
27566911 |
9 |
- |
28162770 |
MOLM13 |
viability |
ATCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
0.7411738840721297 |
[373] |
[451] |
5 |
hSpCas9 |
negative selection |
11479412 |
27566967 |
27566990 |
9 |
- |
28162770 |
MOLM13 |
viability |
TTGGGCTCCAAAGACAGAACAGG |
C9orf72 |
ENSG00000147894 |
-0.32134352223860063 |
[177] |
[102] |
-2 |
hSpCas9 |
negative selection |
11479413 |
27561597 |
27561620 |
9 |
- |
28162770 |
MOLM13 |
viability |
ATTGGTGACAGCTGTCATGAAGG |
C9orf72 |
ENSG00000147894 |
0.43226547181385744 |
[40] |
[39] |
3 |
hSpCas9 |
negative selection |
11479414 |
27566805 |
27566828 |
9 |
- |
28162770 |
MOLM13 |
viability |
CTTTGATGGAAACTGGAATGGGG |
C9orf72 |
ENSG00000147894 |
0.5415990677275881 |
[495] |
[521] |
4 |
hSpCas9 |
negative selection |
11479415 |
27567083 |
27567106 |
9 |
+ |
28162770 |
HEL |
viability |
GCAACAGCTGGAGATGGCGGTGG |
C9orf72 |
ENSG00000147894 |
-0.5407073090955744 |
[133] |
[58] |
-4 |
hSpCas9 |
negative selection |
11648772 |
27566789 |
27566812 |
9 |
- |
28162770 |
HEL |
viability |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
1.0162340690360172 |
[686] |
[889] |
8 |
hSpCas9 |
negative selection |
11648773 |
27566951 |
27566974 |
9 |
- |
28162770 |
HEL |
viability |
GAACAGGTACTTCTCAGTGATGG |
C9orf72 |
ENSG00000147894 |
0.8251398784459499 |
[370] |
[420] |
7 |
hSpCas9 |
negative selection |
11648774 |
27566907 |
27566930 |
9 |
+ |
28162770 |
HEL |
viability |
GGATTTCTCCATTTAGAGTGTGG |
C9orf72 |
ENSG00000147894 |
0.8549448761175102 |
[466] |
[540] |
7 |
hSpCas9 |
negative selection |
11648775 |
27566723 |
27566746 |
9 |
+ |
28162770 |
HEL |
viability |
TCAACACACACTCTATGAAGTGG |
C9orf72 |
ENSG00000147894 |
0.019231287617434534 |
[549] |
[356] |
0 |
hSpCas9 |
negative selection |
11648776 |
27562439 |
27562462 |
9 |
+ |
28162770 |
HEL |
viability |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
0.7513196451542785 |
[741] |
[799] |
6 |
hSpCas9 |
negative selection |
11648777 |
27566888 |
27566911 |
9 |
- |
28162770 |
HEL |
viability |
ATCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
0.551240477514861 |
[357] |
[335] |
4 |
hSpCas9 |
negative selection |
11648778 |
27566967 |
27566990 |
9 |
- |
28162770 |
HEL |
viability |
TTGGGCTCCAAAGACAGAACAGG |
C9orf72 |
ENSG00000147894 |
0.07158213080423126 |
[155] |
[104] |
0 |
hSpCas9 |
negative selection |
11648779 |
27561597 |
27561620 |
9 |
- |
28162770 |
HEL |
viability |
ATTGGTGACAGCTGTCATGAAGG |
C9orf72 |
ENSG00000147894 |
-0.07715324880690755 |
[27] |
[16] |
0 |
hSpCas9 |
negative selection |
11648780 |
27566805 |
27566828 |
9 |
- |
28162770 |
HEL |
viability |
CTTTGATGGAAACTGGAATGGGG |
C9orf72 |
ENSG00000147894 |
0.09754685997180135 |
[482] |
[330] |
0 |
hSpCas9 |
negative selection |
11648781 |
27567083 |
27567106 |
9 |
+ |
28162770 |
MV411 |
viability |
GCAACAGCTGGAGATGGCGGTGG |
C9orf72 |
ENSG00000147894 |
0.5810474507177731 |
[122] |
[154] |
5 |
hSpCas9 |
negative selection |
11818138 |
27566789 |
27566812 |
9 |
- |
28162770 |
MV411 |
viability |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
1.0084840336280196 |
[605] |
[1026] |
8 |
hSpCas9 |
negative selection |
11818139 |
27566951 |
27566974 |
9 |
- |
28162770 |
MV411 |
viability |
GAACAGGTACTTCTCAGTGATGG |
C9orf72 |
ENSG00000147894 |
0.1370600030096778 |
[352] |
[326] |
1 |
hSpCas9 |
negative selection |
11818140 |
27566907 |
27566930 |
9 |
+ |
28162770 |
MV411 |
viability |
GGATTTCTCCATTTAGAGTGTGG |
C9orf72 |
ENSG00000147894 |
0.4309409587256283 |
[375] |
[426] |
4 |
hSpCas9 |
negative selection |
11818141 |
27566723 |
27566746 |
9 |
+ |
28162770 |
MV411 |
viability |
TCAACACACACTCTATGAAGTGG |
C9orf72 |
ENSG00000147894 |
-0.6956353811323891 |
[322] |
[167] |
-5 |
hSpCas9 |
negative selection |
11818142 |
27562439 |
27562462 |
9 |
+ |
28162770 |
MV411 |
viability |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
0.39613928113757435 |
[524] |
[581] |
3 |
hSpCas9 |
negative selection |
11818143 |
27566888 |
27566911 |
9 |
- |
28162770 |
MV411 |
viability |
ATCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
0.21349021885943764 |
[257] |
[251] |
1 |
hSpCas9 |
negative selection |
11818144 |
27566967 |
27566990 |
9 |
- |
28162770 |
MV411 |
viability |
TTGGGCTCCAAAGACAGAACAGG |
C9orf72 |
ENSG00000147894 |
-1.214905663274425 |
[123] |
[44] |
-7 |
hSpCas9 |
negative selection |
11818145 |
27561597 |
27561620 |
9 |
- |
28162770 |
MV411 |
viability |
ATTGGTGACAGCTGTCATGAAGG |
C9orf72 |
ENSG00000147894 |
0.811338435976102 |
[22] |
[33] |
7 |
hSpCas9 |
negative selection |
11818146 |
27566805 |
27566828 |
9 |
- |
28162770 |
MV411 |
viability |
CTTTGATGGAAACTGGAATGGGG |
C9orf72 |
ENSG00000147894 |
0.7369340422620639 |
[353] |
[496] |
6 |
hSpCas9 |
negative selection |
11818147 |
27567083 |
27567106 |
9 |
+ |
28162770 |
MONOMAC1 |
viability |
GCAACAGCTGGAGATGGCGGTGG |
C9orf72 |
ENSG00000147894 |
-0.6798189529742318 |
[108] |
[77] |
-5 |
hSpCas9 |
negative selection |
11987504 |
27566789 |
27566812 |
9 |
- |
28162770 |
MONOMAC1 |
viability |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.9977793299244695 |
[414] |
[949] |
8 |
hSpCas9 |
negative selection |
11987505 |
27566951 |
27566974 |
9 |
- |
28162770 |
MONOMAC1 |
viability |
GAACAGGTACTTCTCAGTGATGG |
C9orf72 |
ENSG00000147894 |
0.45237436138844456 |
[196] |
[308] |
4 |
hSpCas9 |
negative selection |
11987506 |
27566907 |
27566930 |
9 |
+ |
28162770 |
MONOMAC1 |
viability |
GGATTTCTCCATTTAGAGTGTGG |
C9orf72 |
ENSG00000147894 |
0.7168432559219495 |
[301] |
[568] |
6 |
hSpCas9 |
negative selection |
11987507 |
27566723 |
27566746 |
9 |
+ |
28162770 |
MONOMAC1 |
viability |
TCAACACACACTCTATGAAGTGG |
C9orf72 |
ENSG00000147894 |
0.5459525347344224 |
[238] |
[399] |
5 |
hSpCas9 |
negative selection |
11987508 |
27562439 |
27562462 |
9 |
+ |
28162770 |
MONOMAC1 |
viability |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
0.2024458380244485 |
[372] |
[491] |
2 |
hSpCas9 |
negative selection |
11987509 |
27566888 |
27566911 |
9 |
- |
28162770 |
MONOMAC1 |
viability |
ATCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
-0.357077259570022 |
[199] |
[178] |
-3 |
hSpCas9 |
negative selection |
11987510 |
27566967 |
27566990 |
9 |
- |
28162770 |
MONOMAC1 |
viability |
TTGGGCTCCAAAGACAGAACAGG |
C9orf72 |
ENSG00000147894 |
0.4063041829764571 |
[51] |
[78] |
4 |
hSpCas9 |
negative selection |
11987511 |
27561597 |
27561620 |
9 |
- |
28162770 |
MONOMAC1 |
viability |
ATTGGTGACAGCTGTCATGAAGG |
C9orf72 |
ENSG00000147894 |
1.317536325770205 |
[6] |
[19] |
9 |
hSpCas9 |
negative selection |
11987512 |
27566805 |
27566828 |
9 |
- |
28162770 |
MONOMAC1 |
viability |
CTTTGATGGAAACTGGAATGGGG |
C9orf72 |
ENSG00000147894 |
0.3163027258310941 |
[233] |
[333] |
3 |
hSpCas9 |
negative selection |
11987513 |
27567083 |
27567106 |
9 |
+ |
28162770 |
OCIAML2 |
viability |
GCAACAGCTGGAGATGGCGGTGG |
C9orf72 |
ENSG00000147894 |
-0.3168244891631258 |
[19] |
[88] |
-3 |
hSpCas9 |
negative selection |
12156870 |
27566789 |
27566812 |
9 |
- |
28162770 |
OCIAML2 |
viability |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
1.2964510998321157 |
[95] |
[1306] |
9 |
hSpCas9 |
negative selection |
12156871 |
27566951 |
27566974 |
9 |
- |
28162770 |
OCIAML2 |
viability |
GAACAGGTACTTCTCAGTGATGG |
C9orf72 |
ENSG00000147894 |
-0.12129557301414706 |
[72] |
[371] |
-1 |
hSpCas9 |
negative selection |
12156872 |
27566907 |
27566930 |
9 |
+ |
28162770 |
OCIAML2 |
viability |
GGATTTCTCCATTTAGAGTGTGG |
C9orf72 |
ENSG00000147894 |
0.20506727268257285 |
[94] |
[606] |
2 |
hSpCas9 |
negative selection |
12156873 |
27566723 |
27566746 |
9 |
+ |
28162770 |
OCIAML2 |
viability |
TCAACACACACTCTATGAAGTGG |
C9orf72 |
ENSG00000147894 |
0.14657301247920296 |
[58] |
[361] |
1 |
hSpCas9 |
negative selection |
12156874 |
27562439 |
27562462 |
9 |
+ |
28162770 |
OCIAML2 |
viability |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
-0.13701992530716356 |
[122] |
[619] |
-1 |
hSpCas9 |
negative selection |
12156875 |
27566888 |
27566911 |
9 |
- |
28162770 |
OCIAML2 |
viability |
ATCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
0.026201765200329796 |
[44] |
[253] |
0 |
hSpCas9 |
negative selection |
12156876 |
27566967 |
27566990 |
9 |
- |
28162770 |
OCIAML2 |
viability |
TTGGGCTCCAAAGACAGAACAGG |
C9orf72 |
ENSG00000147894 |
-0.0164539320563592 |
[24] |
[136] |
0 |
hSpCas9 |
negative selection |
12156877 |
27561597 |
27561620 |
9 |
- |
28162770 |
OCIAML2 |
viability |
ATTGGTGACAGCTGTCATGAAGG |
C9orf72 |
ENSG00000147894 |
-0.8856673245210049 |
[7] |
[23] |
-6 |
hSpCas9 |
negative selection |
12156878 |
27566805 |
27566828 |
9 |
- |
28162770 |
OCIAML2 |
viability |
CTTTGATGGAAACTGGAATGGGG |
C9orf72 |
ENSG00000147894 |
0.8951779675181226 |
[67] |
[700] |
8 |
hSpCas9 |
negative selection |
12156879 |
27567083 |
27567106 |
9 |
+ |
28162770 |
OCIAML3 |
viability |
GCAACAGCTGGAGATGGCGGTGG |
C9orf72 |
ENSG00000147894 |
-0.022101292428453267 |
[36] |
[109] |
0 |
hSpCas9 |
negative selection |
12326236 |
27566789 |
27566812 |
9 |
- |
28162770 |
OCIAML3 |
viability |
AATGGGGATCGCAGCACATATGG |
C9orf72 |
ENSG00000147894 |
0.21232154756944333 |
[200] |
[702] |
2 |
hSpCas9 |
negative selection |
12326237 |
27566951 |
27566974 |
9 |
- |
28162770 |
OCIAML3 |
viability |
GAACAGGTACTTCTCAGTGATGG |
C9orf72 |
ENSG00000147894 |
-0.5008982359326816 |
[119] |
[255] |
-4 |
hSpCas9 |
negative selection |
12326238 |
27566907 |
27566930 |
9 |
+ |
28162770 |
OCIAML3 |
viability |
GGATTTCTCCATTTAGAGTGTGG |
C9orf72 |
ENSG00000147894 |
-0.10779438901840055 |
[130] |
[366] |
-1 |
hSpCas9 |
negative selection |
12326239 |
27566723 |
27566746 |
9 |
+ |
28162770 |
OCIAML3 |
viability |
TCAACACACACTCTATGAAGTGG |
C9orf72 |
ENSG00000147894 |
-0.33097323449036953 |
[114] |
[275] |
-3 |
hSpCas9 |
negative selection |
12326240 |
27562439 |
27562462 |
9 |
+ |
28162770 |
OCIAML3 |
viability |
ATCACTTCTCCAGTAAGCATTGG |
C9orf72 |
ENSG00000147894 |
0.017721769959778255 |
[177] |
[543] |
0 |
hSpCas9 |
negative selection |
12326241 |
27566888 |
27566911 |
9 |
- |
28162770 |
OCIAML3 |
viability |
ATCCTTCGAAATGCAGAGAGTGG |
C9orf72 |
ENSG00000147894 |
0.019243904828416647 |
[100] |
[308] |
0 |
hSpCas9 |
negative selection |
12326242 |
27566967 |
27566990 |
9 |
- |
28162770 |
OCIAML3 |
viability |
TTGGGCTCCAAAGACAGAACAGG |
C9orf72 |
ENSG00000147894 |
0.5455437120746304 |
[31] |
[140] |
5 |
hSpCas9 |
negative selection |
12326243 |
27561597 |
27561620 |
9 |
- |
28162770 |
OCIAML3 |
viability |
ATTGGTGACAGCTGTCATGAAGG |
C9orf72 |
ENSG00000147894 |
-0.17897014104531928 |
[14] |
[39] |
-1 |
hSpCas9 |
negative selection |
12326244 |
27566805 |
27566828 |
9 |
- |
28162770 |
OCIAML3 |
viability |
CTTTGATGGAAACTGGAATGGGG |
C9orf72 |
ENSG00000147894 |
0.3037807481771029 |
[105] |
[394] |
3 |
hSpCas9 |
negative selection |
12326245 |