| 61888479 |
61888502 |
2 |
- |
26472758 |
Jiyoye |
viability |
GAGAATGTGGCACCCCGGAGCGG |
CCT4 |
ENSG00000115484 |
-0.5139691977828869 |
[88] |
[46] |
-4 |
hSpCas9 |
negative selection |
26905 |
61888370 |
61888393 |
2 |
+ |
26472758 |
Jiyoye |
viability |
GAGAGTGATACCTTTGGCGGCGG |
CCT4 |
ENSG00000115484 |
-4.445267430080269 |
[259] |
[8] |
-9 |
hSpCas9 |
negative selection |
26906 |
61888432 |
61888455 |
2 |
+ |
26472758 |
Jiyoye |
viability |
CCTGATAGGCGCCTTTCCCGCGG |
CCT4 |
ENSG00000115484 |
-1.5928246184941266 |
[111] |
[27] |
-8 |
hSpCas9 |
negative selection |
26907 |
61888479 |
61888502 |
2 |
- |
26472758 |
KBM7 |
viability |
GAGAATGTGGCACCCCGGAGCGG |
CCT4 |
ENSG00000115484 |
-1.103453665845714 |
[227,144] |
[47,32] |
-7 |
hSpCas9 |
negative selection |
218023 |
61888370 |
61888393 |
2 |
+ |
26472758 |
KBM7 |
viability |
GAGAGTGATACCTTTGGCGGCGG |
CCT4 |
ENSG00000115484 |
-2.686565619116278 |
[1046,653] |
[42,76] |
-9 |
hSpCas9 |
negative selection |
218024 |
61888432 |
61888455 |
2 |
+ |
26472758 |
KBM7 |
viability |
CCTGATAGGCGCCTTTCCCGCGG |
CCT4 |
ENSG00000115484 |
-0.6868841536032897 |
[440,355] |
[130,101] |
-5 |
hSpCas9 |
negative selection |
218025 |
61888479 |
61888502 |
2 |
- |
26472758 |
Raji |
viability |
GAGAATGTGGCACCCCGGAGCGG |
CCT4 |
ENSG00000115484 |
-0.4603009739157211 |
[82] |
[13] |
-4 |
hSpCas9 |
negative selection |
409141 |
61888370 |
61888393 |
2 |
+ |
26472758 |
Raji |
viability |
GAGAGTGATACCTTTGGCGGCGG |
CCT4 |
ENSG00000115484 |
-1.4131883780776018 |
[481] |
[41] |
-7 |
hSpCas9 |
negative selection |
409142 |
61888432 |
61888455 |
2 |
+ |
26472758 |
Raji |
viability |
CCTGATAGGCGCCTTTCCCGCGG |
CCT4 |
ENSG00000115484 |
-1.2501684692444843 |
[327] |
[31] |
-7 |
hSpCas9 |
negative selection |
409143 |
61888479 |
61888502 |
2 |
- |
26472758 |
K562 |
viability |
GAGAATGTGGCACCCCGGAGCGG |
CCT4 |
ENSG00000115484 |
-0.9255062737758655 |
[197] |
[87] |
-5 |
hSpCas9 |
negative selection |
600259 |
61888370 |
61888393 |
2 |
+ |
26472758 |
K562 |
viability |
GAGAGTGATACCTTTGGCGGCGG |
CCT4 |
ENSG00000115484 |
-2.514437676699967 |
[818] |
[120] |
-8 |
hSpCas9 |
negative selection |
600260 |
61888432 |
61888455 |
2 |
+ |
26472758 |
K562 |
viability |
CCTGATAGGCGCCTTTCCCGCGG |
CCT4 |
ENSG00000115484 |
-1.2001100683217962 |
[312] |
[114] |
-6 |
hSpCas9 |
negative selection |
600261 |
61888387 |
61888410 |
2 |
+ |
26627737 |
DLD1 |
viability |
CGGCGGAAATGTTGCTGAAGCGG |
CCT4 |
ENSG00000115484 |
-0.881011352030371 |
[1310] |
[242,278,157] |
-7 |
hSpCas9 |
negative selection |
812301 |
61888432 |
61888455 |
2 |
+ |
26627737 |
DLD1 |
viability |
CCTGATAGGCGCCTTTCCCGCGG |
CCT4 |
ENSG00000115484 |
-1.5827189764698766 |
[564] |
[76,33,63] |
-8 |
hSpCas9 |
negative selection |
812302 |
61888387 |
61888410 |
2 |
+ |
26627737 |
GBM cells |
viability after 5 days |
CGGCGGAAATGTTGCTGAAGCGG |
CCT4 |
ENSG00000115484 |
-0.36412053094810837 |
[773] |
[274,369] |
-5 |
hSpCas9 |
negative selection |
894616 |
61888432 |
61888455 |
2 |
+ |
26627737 |
GBM cells |
viability after 5 days |
CCTGATAGGCGCCTTTCCCGCGG |
CCT4 |
ENSG00000115484 |
-2.131332411982435 |
[240] |
[25,32] |
-9 |
hSpCas9 |
negative selection |
894617 |
61888387 |
61888410 |
2 |
+ |
26627737 |
GBM cells |
viability after 13 days |
CGGCGGAAATGTTGCTGAAGCGG |
CCT4 |
ENSG00000115484 |
-0.6293563909058066 |
[773] |
[276,266] |
-6 |
hSpCas9 |
negative selection |
976931 |
61888432 |
61888455 |
2 |
+ |
26627737 |
GBM cells |
viability after 13 days |
CCTGATAGGCGCCTTTCCCGCGG |
CCT4 |
ENSG00000115484 |
-2.908795688272904 |
[240] |
[12,20] |
-9 |
hSpCas9 |
negative selection |
976932 |
61888387 |
61888410 |
2 |
+ |
26627737 |
GBM cells |
viability after 21 days |
CGGCGGAAATGTTGCTGAAGCGG |
CCT4 |
ENSG00000115484 |
-1.154053330296282 |
[773] |
[189,187] |
-7 |
hSpCas9 |
negative selection |
1059246 |
61888432 |
61888455 |
2 |
+ |
26627737 |
GBM cells |
viability after 21 days |
CCTGATAGGCGCCTTTCCCGCGG |
CCT4 |
ENSG00000115484 |
-2.7554978118469635 |
[240] |
[21,16] |
-9 |
hSpCas9 |
negative selection |
1059247 |
61888387 |
61888410 |
2 |
+ |
26627737 |
RPE1 |
viability after 9 days |
CGGCGGAAATGTTGCTGAAGCGG |
CCT4 |
ENSG00000115484 |
-3.269819434262966 |
[2662] |
[116,46] |
-9 |
hSpCas9 |
negative selection |
1141561 |
61888432 |
61888455 |
2 |
+ |
26627737 |
RPE1 |
viability after 9 days |
CCTGATAGGCGCCTTTCCCGCGG |
CCT4 |
ENSG00000115484 |
-1.4621880938978242 |
[681] |
[42,121] |
-8 |
hSpCas9 |
negative selection |
1141562 |
61888387 |
61888410 |
2 |
+ |
26627737 |
RPE1 |
viability after 12 days |
CGGCGGAAATGTTGCTGAAGCGG |
CCT4 |
ENSG00000115484 |
-2.1164030872916606 |
[2662] |
[215,110] |
-8 |
hSpCas9 |
negative selection |
1223876 |
61888432 |
61888455 |
2 |
+ |
26627737 |
RPE1 |
viability after 12 days |
CCTGATAGGCGCCTTTCCCGCGG |
CCT4 |
ENSG00000115484 |
-2.170053330356535 |
[681] |
[47,32] |
-8 |
hSpCas9 |
negative selection |
1223877 |
61888387 |
61888410 |
2 |
+ |
26627737 |
RPE1 |
viability after 15 days |
CGGCGGAAATGTTGCTGAAGCGG |
CCT4 |
ENSG00000115484 |
-1.7334468226103286 |
[2662] |
[420,38] |
-8 |
hSpCas9 |
negative selection |
1306191 |
61888432 |
61888455 |
2 |
+ |
26627737 |
RPE1 |
viability after 15 days |
CCTGATAGGCGCCTTTCCCGCGG |
CCT4 |
ENSG00000115484 |
-2.909758316968564 |
[681] |
[15,34] |
-9 |
hSpCas9 |
negative selection |
1306192 |
61888387 |
61888410 |
2 |
+ |
26627737 |
RPE1 |
viability after 18 days |
CGGCGGAAATGTTGCTGAAGCGG |
CCT4 |
ENSG00000115484 |
-3.4952709160939253 |
[2662] |
[84,40] |
-9 |
hSpCas9 |
negative selection |
1388506 |
61888432 |
61888455 |
2 |
+ |
26627737 |
RPE1 |
viability after 18 days |
CCTGATAGGCGCCTTTCCCGCGG |
CCT4 |
ENSG00000115484 |
-4.152301716710762 |
[681] |
[5,14] |
-9 |
hSpCas9 |
negative selection |
1388507 |
61888387 |
61888410 |
2 |
+ |
26627737 |
HeLa |
viability after 8 days |
CGGCGGAAATGTTGCTGAAGCGG |
CCT4 |
ENSG00000115484 |
-2.174576949818711 |
[2702] |
[248,253,274] |
-9 |
hSpCas9 |
negative selection |
1470821 |
61888432 |
61888455 |
2 |
+ |
26627737 |
HeLa |
viability after 8 days |
CCTGATAGGCGCCTTTCCCGCGG |
CCT4 |
ENSG00000115484 |
-0.5431064972146047 |
[249] |
[146,4,86] |
-5 |
hSpCas9 |
negative selection |
1470822 |
61888387 |
61888410 |
2 |
+ |
26627737 |
HeLa |
viability after 12 days |
CGGCGGAAATGTTGCTGAAGCGG |
CCT4 |
ENSG00000115484 |
-2.441865748366827 |
[2702] |
[207,137,277] |
-9 |
hSpCas9 |
negative selection |
1553136 |
61888432 |
61888455 |
2 |
+ |
26627737 |
HeLa |
viability after 12 days |
CCTGATAGGCGCCTTTCCCGCGG |
CCT4 |
ENSG00000115484 |
-0.7116531491901801 |
[249] |
[30,18,142] |
-6 |
hSpCas9 |
negative selection |
1553137 |
61888387 |
61888410 |
2 |
+ |
26627737 |
HeLa |
viability after 15 days |
CGGCGGAAATGTTGCTGAAGCGG |
CCT4 |
ENSG00000115484 |
-2.8916708269677622 |
[2702] |
[53,195,199] |
-9 |
hSpCas9 |
negative selection |
1635451 |
61888432 |
61888455 |
2 |
+ |
26627737 |
HeLa |
viability after 15 days |
CCTGATAGGCGCCTTTCCCGCGG |
CCT4 |
ENSG00000115484 |
-1.3333508987056075 |
[249] |
[20,52,47] |
-8 |
hSpCas9 |
negative selection |
1635452 |
61888387 |
61888410 |
2 |
+ |
26627737 |
HeLa |
viability after 18 days |
CGGCGGAAATGTTGCTGAAGCGG |
CCT4 |
ENSG00000115484 |
-2.906081761831235 |
[2702] |
[35,158,199] |
-9 |
hSpCas9 |
negative selection |
1717766 |
61888432 |
61888455 |
2 |
+ |
26627737 |
HeLa |
viability after 18 days |
CCTGATAGGCGCCTTTCCCGCGG |
CCT4 |
ENSG00000115484 |
-1.230567017949184 |
[249] |
[18,44,47] |
-8 |
hSpCas9 |
negative selection |
1717767 |
61888387 |
61888410 |
2 |
+ |
26627737 |
HCT116 |
viability after 6 days |
CGGCGGAAATGTTGCTGAAGCGG |
CCT4 |
ENSG00000115484 |
-0.8298713445573609 |
[2425] |
[327,151] |
-5 |
hSpCas9 |
negative selection |
1800081 |
61888432 |
61888455 |
2 |
+ |
26627737 |
HCT116 |
viability after 6 days |
CCTGATAGGCGCCTTTCCCGCGG |
CCT4 |
ENSG00000115484 |
-1.6664587761601013 |
[406] |
[14,22] |
-7 |
hSpCas9 |
negative selection |
1800082 |
61888387 |
61888410 |
2 |
+ |
26627737 |
HCT116 |
viability after 8 days |
CGGCGGAAATGTTGCTGAAGCGG |
CCT4 |
ENSG00000115484 |
-0.46266278666680294 |
[1147] |
[452,466,456] |
-5 |
hSpCas9 |
negative selection |
1882396 |
61888432 |
61888455 |
2 |
+ |
26627737 |
HCT116 |
viability after 8 days |
CCTGATAGGCGCCTTTCCCGCGG |
CCT4 |
ENSG00000115484 |
-1.7039553537139969 |
[344] |
[84,70,19] |
-9 |
hSpCas9 |
negative selection |
1882397 |
61888387 |
61888410 |
2 |
+ |
26627737 |
HCT116 |
viability after 9 days |
CGGCGGAAATGTTGCTGAAGCGG |
CCT4 |
ENSG00000115484 |
-0.6834485217852879 |
[2425] |
[418,390] |
-5 |
hSpCas9 |
negative selection |
1964711 |
61888432 |
61888455 |
2 |
+ |
26627737 |
HCT116 |
viability after 9 days |
CCTGATAGGCGCCTTTCCCGCGG |
CCT4 |
ENSG00000115484 |
-3.239768229560161 |
[406] |
[20,3] |
-9 |
hSpCas9 |
negative selection |
1964712 |
61888387 |
61888410 |
2 |
+ |
26627737 |
HCT116 |
viability after 12 days |
CGGCGGAAATGTTGCTGAAGCGG |
CCT4 |
ENSG00000115484 |
-0.8672732694560956 |
[1147] |
[226,401,373] |
-7 |
hSpCas9 |
negative selection |
2047026 |
61888432 |
61888455 |
2 |
+ |
26627737 |
HCT116 |
viability after 12 days |
CCTGATAGGCGCCTTTCCCGCGG |
CCT4 |
ENSG00000115484 |
-1.52436854689657 |
[344] |
[46,83,59] |
-9 |
hSpCas9 |
negative selection |
2047027 |
61888387 |
61888410 |
2 |
+ |
26627737 |
HCT116 |
viability after 15 days |
CGGCGGAAATGTTGCTGAAGCGG |
CCT4 |
ENSG00000115484 |
-1.3834548407145482 |
[1147] |
[218,363,171] |
-8 |
hSpCas9 |
negative selection |
2129341 |
61888432 |
61888455 |
2 |
+ |
26627737 |
HCT116 |
viability after 15 days |
CCTGATAGGCGCCTTTCCCGCGG |
CCT4 |
ENSG00000115484 |
-2.053861640889162 |
[344] |
[99,41,7] |
-9 |
hSpCas9 |
negative selection |
2129342 |
61888387 |
61888410 |
2 |
+ |
26627737 |
HCT116 |
viability after 18 days |
CGGCGGAAATGTTGCTGAAGCGG |
CCT4 |
ENSG00000115484 |
-1.1608494529881663 |
[1147] |
[95,384,254] |
-8 |
hSpCas9 |
negative selection |
2211656 |
61888432 |
61888455 |
2 |
+ |
26627737 |
HCT116 |
viability after 18 days |
CCTGATAGGCGCCTTTCCCGCGG |
CCT4 |
ENSG00000115484 |
-2.708065606801566 |
[344] |
[18,15,42] |
-9 |
hSpCas9 |
negative selection |
2211657 |
61888367 |
61888390 |
2 |
+ |
24336569 |
HL60 |
viability |
CATGAGAGTGATACCTTTGGCGG |
CCT4 |
ENSG00000115484 |
-4.932016712087602 |
[677] |
[46] |
-9 |
hSpCas9 |
negative selection |
2256197 |
61888380 |
61888403 |
2 |
- |
24336569 |
HL60 |
viability |
AGCAACATTTCCGCCGCCAAAGG |
CCT4 |
ENSG00000115484 |
-1.8859669063555087 |
[378] |
[216] |
-9 |
hSpCas9 |
negative selection |
2256198 |
61888387 |
61888410 |
2 |
+ |
24336569 |
HL60 |
viability |
CGGCGGAAATGTTGCTGAAGCGG |
CCT4 |
ENSG00000115484 |
-0.5007636267618998 |
[338] |
[506] |
-4 |
hSpCas9 |
negative selection |
2256199 |
61888393 |
61888416 |
2 |
+ |
24336569 |
HL60 |
viability |
AAATGTTGCTGAAGCGGATCTGG |
CCT4 |
ENSG00000115484 |
-0.5423052895208649 |
[703] |
[1022] |
-5 |
hSpCas9 |
negative selection |
2256200 |
61888398 |
61888421 |
2 |
+ |
24336569 |
HL60 |
viability |
TTGCTGAAGCGGATCTGGGCTGG |
CCT4 |
ENSG00000115484 |
-1.261098313051137 |
[204] |
[180] |
-8 |
hSpCas9 |
negative selection |
2256201 |
61888408 |
61888431 |
2 |
+ |
24336569 |
HL60 |
viability |
GGATCTGGGCTGGCTTGTCGCGG |
CCT4 |
ENSG00000115484 |
-2.448741182691132 |
[306] |
[118] |
-9 |
hSpCas9 |
negative selection |
2256202 |
61888418 |
61888441 |
2 |
+ |
24336569 |
HL60 |
viability |
TGGCTTGTCGCGGTCCTGATAGG |
CCT4 |
ENSG00000115484 |
-2.4243518141519047 |
[519] |
[204] |
-9 |
hSpCas9 |
negative selection |
2256203 |
61888432 |
61888455 |
2 |
+ |
24336569 |
HL60 |
viability |
CCTGATAGGCGCCTTTCCCGCGG |
CCT4 |
ENSG00000115484 |
-3.856757813454202 |
[88] |
[12] |
-9 |
hSpCas9 |
negative selection |
2256204 |
61888487 |
61888510 |
2 |
+ |
24336569 |
HL60 |
viability |
GGGTGCCACATTCTCGGGCATGG |
CCT4 |
ENSG00000115484 |
-1.5372623785128472 |
[346] |
[252] |
-8 |
hSpCas9 |
negative selection |
2256205 |
61888492 |
61888515 |
2 |
- |
24336569 |
HL60 |
viability |
GTTTGCCATGCCCGAGAATGTGG |
CCT4 |
ENSG00000115484 |
-0.5563348494249231 |
[639] |
[920] |
-5 |
hSpCas9 |
negative selection |
2256206 |
61888367 |
61888390 |
2 |
+ |
24336569 |
KBM7 |
viability |
CATGAGAGTGATACCTTTGGCGG |
CCT4 |
ENSG00000115484 |
-5.126724136326747 |
[268] |
[20] |
-9 |
hSpCas9 |
negative selection |
2323374 |
61888380 |
61888403 |
2 |
- |
24336569 |
KBM7 |
viability |
AGCAACATTTCCGCCGCCAAAGG |
CCT4 |
ENSG00000115484 |
-8.161824714215005 |
[104] |
[0] |
-9 |
hSpCas9 |
negative selection |
2323375 |
61888387 |
61888410 |
2 |
+ |
24336569 |
KBM7 |
viability |
CGGCGGAAATGTTGCTGAAGCGG |
CCT4 |
ENSG00000115484 |
-2.46736956230889 |
[366] |
[180] |
-8 |
hSpCas9 |
negative selection |
2323376 |
61888393 |
61888416 |
2 |
+ |
24336569 |
KBM7 |
viability |
AAATGTTGCTGAAGCGGATCTGG |
CCT4 |
ENSG00000115484 |
0.1606530834951207 |
[368] |
[1124] |
1 |
hSpCas9 |
negative selection |
2323377 |
61888398 |
61888421 |
2 |
+ |
24336569 |
KBM7 |
viability |
TTGCTGAAGCGGATCTGGGCTGG |
CCT4 |
ENSG00000115484 |
-2.598943788084467 |
[250] |
[112] |
-9 |
hSpCas9 |
negative selection |
2323378 |
61888408 |
61888431 |
2 |
+ |
24336569 |
KBM7 |
viability |
GGATCTGGGCTGGCTTGTCGCGG |
CCT4 |
ENSG00000115484 |
-1.741310399605593 |
[265] |
[216] |
-8 |
hSpCas9 |
negative selection |
2323379 |
61888418 |
61888441 |
2 |
+ |
24336569 |
KBM7 |
viability |
TGGCTTGTCGCGGTCCTGATAGG |
CCT4 |
ENSG00000115484 |
-1.8297678162537192 |
[274] |
[210] |
-8 |
hSpCas9 |
negative selection |
2323380 |
61888432 |
61888455 |
2 |
+ |
24336569 |
KBM7 |
viability |
CCTGATAGGCGCCTTTCCCGCGG |
CCT4 |
ENSG00000115484 |
0.5259485920899261 |
[54] |
[215] |
5 |
hSpCas9 |
negative selection |
2323381 |
61888487 |
61888510 |
2 |
+ |
24336569 |
KBM7 |
viability |
GGGTGCCACATTCTCGGGCATGG |
CCT4 |
ENSG00000115484 |
-2.5944205848781534 |
[185] |
[83] |
-9 |
hSpCas9 |
negative selection |
2323382 |
61888492 |
61888515 |
2 |
- |
24336569 |
KBM7 |
viability |
GTTTGCCATGCCCGAGAATGTGG |
CCT4 |
ENSG00000115484 |
-2.6252088627162298 |
[750] |
[331] |
-9 |
hSpCas9 |
negative selection |
2323383 |
61888433 |
61888456 |
2 |
+ |
27453484 |
HT29 |
resistance to T3SS1-dependent cytotoxicity |
CCTGATAGGCGCCTTTCCCGCGG |
CCT4 |
ENSG00000115484 |
0.05254550178639161 |
[2,2] |
[1,3] |
1 |
hSpCas9 |
positive selection |
2977502 |
61888371 |
61888394 |
2 |
+ |
27453484 |
HT29 |
resistance to T3SS1-dependent cytotoxicity |
GAGAGTGATACCTTTGGCGGCGG |
CCT4 |
ENSG00000115484 |
-0.26848953943083476 |
[2,2] |
[2,0] |
-4 |
hSpCas9 |
positive selection |
2977503 |
61888433 |
61888456 |
2 |
+ |
27453484 |
HT29 |
resistance to T3SS2-dependent cytotoxicity |
CCTGATAGGCGCCTTTCCCGCGG |
CCT4 |
ENSG00000115484 |
0.014599591396539602 |
[2,2] |
[3,0] |
0 |
hSpCas9 |
positive selection |
3045360 |
61888371 |
61888394 |
2 |
+ |
27453484 |
HT29 |
resistance to T3SS2-dependent cytotoxicity |
GAGAGTGATACCTTTGGCGGCGG |
CCT4 |
ENSG00000115484 |
-0.7485814415372037 |
[2,2] |
[0,0] |
-8 |
hSpCas9 |
positive selection |
3045361 |
61888432 |
61888455 |
2 |
+ |
26780180 |
HT29 |
viability (Avana library 4 designs) |
CCTGATAGGCGCCTTTCCCGCGG |
CCT4 |
ENSG00000115484 |
2.36360774726508 |
[] |
[] |
8 |
hSpCas9 |
negative selection |
3413795 |
61888370 |
61888393 |
2 |
+ |
26780180 |
HT29 |
viability (Avana library 4 designs) |
GAGAGTGATACCTTTGGCGGCGG |
CCT4 |
ENSG00000115484 |
4.59830306984092 |
[] |
[] |
9 |
hSpCas9 |
negative selection |
3413796 |
61888370 |
61888393 |
2 |
+ |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
GAGAGTGATACCTTTGGCGGCGG |
CCT4 |
ENSG00000115484 |
-10.9309853836368 |
[] |
[] |
-8 |
hSpCas9 |
negative selection |
3490003 |
61888432 |
61888455 |
2 |
+ |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
CCTGATAGGCGCCTTTCCCGCGG |
CCT4 |
ENSG00000115484 |
-11.2261047484573 |
[] |
[] |
-8 |
hSpCas9 |
negative selection |
3490004 |
61888370 |
61888393 |
2 |
+ |
26780180 |
A375 |
viability (Avana lentiGuide) |
GAGAGTGATACCTTTGGCGGCGG |
CCT4 |
ENSG00000115484 |
14.7149973959539 |
[] |
[] |
8 |
hSpCas9 |
negative selection |
3598662 |
61888432 |
61888455 |
2 |
+ |
26780180 |
A375 |
viability (Avana lentiGuide) |
CCTGATAGGCGCCTTTCCCGCGG |
CCT4 |
ENSG00000115484 |
21.5656665105685 |
[] |
[] |
9 |
hSpCas9 |
negative selection |
3598663 |
61888370 |
61888393 |
2 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
GAGAGTGATACCTTTGGCGGCGG |
CCT4 |
ENSG00000115484 |
-1.0284012731322472 |
[4] |
[2,1] |
-9 |
hSpCas9 |
positive selection |
3707321 |
61888432 |
61888455 |
2 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
CCTGATAGGCGCCTTTCCCGCGG |
CCT4 |
ENSG00000115484 |
-0.7106699279028555 |
[4] |
[3,1] |
-7 |
hSpCas9 |
positive selection |
3707322 |
61888370 |
61888393 |
2 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
GAGAGTGATACCTTTGGCGGCGG |
CCT4 |
ENSG00000115484 |
-1.2289129824981495 |
[5] |
[1,1] |
-9 |
hSpCas9 |
positive selection |
3815928 |
61888432 |
61888455 |
2 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
CCTGATAGGCGCCTTTCCCGCGG |
CCT4 |
ENSG00000115484 |
-0.49875389075058485 |
[6] |
[3,2] |
-6 |
hSpCas9 |
positive selection |
3815929 |
61888380 |
61888402 |
2 |
- |
27760321 |
OCIAML3 |
viability |
GCAACATTTCCGCCGCCAAAGG |
CCT4 |
ENSG00000115484 |
-1.6134191300859797 |
[794,631] |
[126,251] |
-8 |
hSpCas9 |
negative selection |
4387127 |
61888380 |
61888402 |
2 |
- |
27760321 |
OCIAML2 |
viability |
GCAACATTTCCGCCGCCAAAGG |
CCT4 |
ENSG00000115484 |
-1.9548474953576214 |
[794,631] |
[150,143] |
-9 |
hSpCas9 |
negative selection |
4470590 |
61888380 |
61888402 |
2 |
- |
27760321 |
MV411 |
viability |
GCAACATTTCCGCCGCCAAAGG |
CCT4 |
ENSG00000115484 |
-1.8399232206644138 |
[794,631] |
[35,272] |
-8 |
hSpCas9 |
negative selection |
4554053 |
61888380 |
61888402 |
2 |
- |
27760321 |
HL60 |
viability |
GCAACATTTCCGCCGCCAAAGG |
CCT4 |
ENSG00000115484 |
-1.9362264869030512 |
[794,631] |
[146,155] |
-9 |
hSpCas9 |
negative selection |
4637516 |
61888380 |
61888402 |
2 |
- |
27760321 |
HT1080 |
viability |
GCAACATTTCCGCCGCCAAAGG |
CCT4 |
ENSG00000115484 |
-7.807846426983687 |
[631,492] |
[0,0] |
-9 |
hSpCas9 |
negative selection |
4720979 |
61888380 |
61888402 |
2 |
- |
27760321 |
HT29 |
viability after 7 days |
GCAACATTTCCGCCGCCAAAGG |
CCT4 |
ENSG00000115484 |
-0.5833136935163523 |
[631,492] |
[539,225,682] |
-7 |
hSpCas9 |
negative selection |
4804442 |
61888380 |
61888402 |
2 |
- |
27760321 |
HT29 |
viability after 25 days |
GCAACATTTCCGCCGCCAAAGG |
CCT4 |
ENSG00000115484 |
-6.106722086900522 |
[631,492] |
[4,15,6] |
-9 |
hSpCas9 |
negative selection |
4887905 |
61888380 |
61888402 |
2 |
- |
27760321 |
HT29 |
viability after 22 days |
GCAACATTTCCGCCGCCAAAGG |
CCT4 |
ENSG00000115484 |
-8.616702724544956 |
[631,492] |
[0,0,2] |
-9 |
hSpCas9 |
negative selection |
4971368 |
61888380 |
61888402 |
2 |
- |
27760321 |
HT29 |
viability after 19 days |
GCAACATTTCCGCCGCCAAAGG |
CCT4 |
ENSG00000115484 |
-4.035689200349847 |
[631,492] |
[123,2,0] |
-9 |
hSpCas9 |
negative selection |
5054831 |
61888380 |
61888402 |
2 |
- |
27760321 |
HT29 |
viability after 16 days |
GCAACATTTCCGCCGCCAAAGG |
CCT4 |
ENSG00000115484 |
-5.169478972430287 |
[631,492] |
[50,2,1] |
-9 |
hSpCas9 |
negative selection |
5138294 |
61888380 |
61888402 |
2 |
- |
27760321 |
HT29 |
viability after 13 days |
GCAACATTTCCGCCGCCAAAGG |
CCT4 |
ENSG00000115484 |
-3.526941941145276 |
[631,492] |
[126,8,34] |
-9 |
hSpCas9 |
negative selection |
5221757 |
61888380 |
61888402 |
2 |
- |
27760321 |
HT29 |
viability after 10 days |
GCAACATTTCCGCCGCCAAAGG |
CCT4 |
ENSG00000115484 |
-2.758752868488575 |
[631,492] |
[157,93,59] |
-9 |
hSpCas9 |
negative selection |
5305220 |
61888380 |
61888402 |
2 |
- |
27760321 |
MOLM13 |
viability |
GCAACATTTCCGCCGCCAAAGG |
CCT4 |
ENSG00000115484 |
-1.2208023667335737 |
[794,631] |
[34,287] |
-6 |
hSpCas9 |
negative selection |
5388683 |
61888521 |
61888544 |
2 |
+ |
27661255 |
K562 |
viability |
GTGTCTGGGTTGGCTCGGGAAGG |
CCT4 |
ENSG00000115484 |
-2.1494456362164036 |
[939,1045] |
[212,148] |
-9 |
dCas9-KRAB |
negative selection |
5469291 |
61888563 |
61888586 |
2 |
+ |
27661255 |
K562 |
viability |
GGCCGGCCGCAGTGTAATAACGG |
CCT4 |
ENSG00000115484 |
-2.7112464950472046 |
[361,554] |
[68,43] |
-9 |
dCas9-KRAB |
negative selection |
5469292 |
61888569 |
61888592 |
2 |
- |
27661255 |
K562 |
viability |
GGCTTACCGTTATTACACTGCGG |
CCT4 |
ENSG00000115484 |
-3.8681247391538225 |
[390,351] |
[28,12] |
-9 |
dCas9-KRAB |
negative selection |
5469293 |
61888387 |
61888410 |
2 |
+ |
27869803 |
HPAFII |
viability after 27 days |
CGGCGGAAATGTTGCTGAAGCGG |
CCT4 |
ENSG00000115484 |
-2.2590852204100265 |
[984] |
[141,79,NaN] |
-8 |
hSpCas9 |
negative selection |
9575361 |
61888432 |
61888455 |
2 |
+ |
27869803 |
HPAFII |
viability after 27 days |
CCTGATAGGCGCCTTTCCCGCGG |
CCT4 |
ENSG00000115484 |
-0.5758757881535917 |
[182] |
[99,34,NaN] |
-4 |
hSpCas9 |
negative selection |
9575362 |
61888387 |
61888410 |
2 |
+ |
27869803 |
HPAFII |
viability after 15 days |
CGGCGGAAATGTTGCTGAAGCGG |
CCT4 |
ENSG00000115484 |
-0.5995350450400097 |
[984] |
[837,611,NaN] |
-6 |
hSpCas9 |
negative selection |
9657810 |
61888432 |
61888455 |
2 |
+ |
27869803 |
HPAFII |
viability after 15 days |
CCTGATAGGCGCCTTTCCCGCGG |
CCT4 |
ENSG00000115484 |
-0.7337514342962012 |
[182] |
[137,105,NaN] |
-6 |
hSpCas9 |
negative selection |
9657811 |
61888387 |
61888410 |
2 |
+ |
27869803 |
ASPC1 |
viability after 36 days |
CGGCGGAAATGTTGCTGAAGCGG |
CCT4 |
ENSG00000115484 |
0.3347068066534047 |
[2336] |
[1105,918,1050] |
3 |
hSpCas9 |
negative selection |
9740259 |
61888432 |
61888455 |
2 |
+ |
27869803 |
ASPC1 |
viability after 36 days |
CCTGATAGGCGCCTTTCCCGCGG |
CCT4 |
ENSG00000115484 |
-1.0384485847805427 |
[729] |
[114,64,175] |
-7 |
hSpCas9 |
negative selection |
9740260 |
61888387 |
61888410 |
2 |
+ |
27869803 |
PATU8988S |
viability after 35 days |
CGGCGGAAATGTTGCTGAAGCGG |
CCT4 |
ENSG00000115484 |
-1.8075805224898396 |
[1826] |
[298,120,NaN] |
-8 |
hSpCas9 |
negative selection |
9822708 |
61888432 |
61888455 |
2 |
+ |
27869803 |
PATU8988S |
viability after 35 days |
CCTGATAGGCGCCTTTCCCGCGG |
CCT4 |
ENSG00000115484 |
-2.344470868139559 |
[604] |
[37,57,NaN] |
-9 |
hSpCas9 |
negative selection |
9822709 |
61888387 |
61888410 |
2 |
+ |
27869803 |
PATU8988S |
viability after 31 days |
CGGCGGAAATGTTGCTGAAGCGG |
CCT4 |
ENSG00000115484 |
-1.8132852811838136 |
[1826] |
[256,143,NaN] |
-9 |
hSpCas9 |
negative selection |
9905157 |
61888432 |
61888455 |
2 |
+ |
27869803 |
PATU8988S |
viability after 31 days |
CCTGATAGGCGCCTTTCCCGCGG |
CCT4 |
ENSG00000115484 |
-2.2786039641804052 |
[604] |
[43,56,NaN] |
-9 |
hSpCas9 |
negative selection |
9905158 |
61888387 |
61888410 |
2 |
+ |
27869803 |
HPAFII |
viability after 35 days |
CGGCGGAAATGTTGCTGAAGCGG |
CCT4 |
ENSG00000115484 |
-3.8037357376038576 |
[984] |
[38,31,NaN] |
-9 |
hSpCas9 |
negative selection |
9987606 |
61888432 |
61888455 |
2 |
+ |
27869803 |
HPAFII |
viability after 35 days |
CCTGATAGGCGCCTTTCCCGCGG |
CCT4 |
ENSG00000115484 |
-0.9171568784529586 |
[182] |
[49,47,NaN] |
-5 |
hSpCas9 |
negative selection |
9987607 |
61888387 |
61888410 |
2 |
+ |
27869803 |
HPAFII |
viability after 31 days |
CGGCGGAAATGTTGCTGAAGCGG |
CCT4 |
ENSG00000115484 |
-3.599194894043354 |
[984] |
[36,54,NaN] |
-9 |
hSpCas9 |
negative selection |
10070055 |
61888432 |
61888455 |
2 |
+ |
27869803 |
HPAFII |
viability after 31 days |
CCTGATAGGCGCCTTTCCCGCGG |
CCT4 |
ENSG00000115484 |
-0.5226014344086549 |
[182] |
[48,95,NaN] |
-3 |
hSpCas9 |
negative selection |
10070056 |
61888479 |
61888502 |
2 |
- |
28162770 |
P31FUJ |
viability |
GAGAATGTGGCACCCCGGAGCGG |
CCT4 |
ENSG00000115484 |
-1.5823866422046065 |
[78] |
[30] |
-7 |
hSpCas9 |
negative selection |
10128883 |
61888370 |
61888393 |
2 |
+ |
28162770 |
P31FUJ |
viability |
GAGAGTGATACCTTTGGCGGCGG |
CCT4 |
ENSG00000115484 |
-3.9792281278296513 |
[254] |
[18] |
-9 |
hSpCas9 |
negative selection |
10128884 |
61888432 |
61888455 |
2 |
+ |
28162770 |
P31FUJ |
viability |
CCTGATAGGCGCCTTTCCCGCGG |
CCT4 |
ENSG00000115484 |
-1.241313704269896 |
[339] |
[168] |
-7 |
hSpCas9 |
negative selection |
10128885 |
61888479 |
61888502 |
2 |
- |
28162770 |
TF1 |
viability |
GAGAATGTGGCACCCCGGAGCGG |
CCT4 |
ENSG00000115484 |
NaN |
[NaN] |
[67] |
1 |
hSpCas9 |
negative selection |
10298249 |
61888370 |
61888393 |
2 |
+ |
28162770 |
TF1 |
viability |
GAGAGTGATACCTTTGGCGGCGG |
CCT4 |
ENSG00000115484 |
NaN |
[NaN] |
[70] |
1 |
hSpCas9 |
negative selection |
10298250 |
61888432 |
61888455 |
2 |
+ |
28162770 |
TF1 |
viability |
CCTGATAGGCGCCTTTCCCGCGG |
CCT4 |
ENSG00000115484 |
NaN |
[NaN] |
[82] |
1 |
hSpCas9 |
negative selection |
10298251 |
61888479 |
61888502 |
2 |
- |
28162770 |
SKM1 |
viability |
GAGAATGTGGCACCCCGGAGCGG |
CCT4 |
ENSG00000115484 |
-0.9688430863512767 |
[30] |
[27] |
-6 |
hSpCas9 |
negative selection |
10467615 |
61888370 |
61888393 |
2 |
+ |
28162770 |
SKM1 |
viability |
GAGAGTGATACCTTTGGCGGCGG |
CCT4 |
ENSG00000115484 |
-3.009628701197777 |
[81] |
[17] |
-9 |
hSpCas9 |
negative selection |
10467616 |
61888432 |
61888455 |
2 |
+ |
28162770 |
SKM1 |
viability |
CCTGATAGGCGCCTTTCCCGCGG |
CCT4 |
ENSG00000115484 |
-1.987060944292502 |
[73] |
[32] |
-8 |
hSpCas9 |
negative selection |
10467617 |
61888479 |
61888502 |
2 |
- |
28162770 |
SKM1 |
viability |
GAGAATGTGGCACCCCGGAGCGG |
CCT4 |
ENSG00000115484 |
-0.9688430863512767 |
[30] |
[27] |
-6 |
hSpCas9 |
negative selection |
10636981 |
61888370 |
61888393 |
2 |
+ |
28162770 |
SKM1 |
viability |
GAGAGTGATACCTTTGGCGGCGG |
CCT4 |
ENSG00000115484 |
-3.009628701197777 |
[81] |
[17] |
-9 |
hSpCas9 |
negative selection |
10636982 |
61888432 |
61888455 |
2 |
+ |
28162770 |
SKM1 |
viability |
CCTGATAGGCGCCTTTCCCGCGG |
CCT4 |
ENSG00000115484 |
-1.987060944292502 |
[73] |
[32] |
-8 |
hSpCas9 |
negative selection |
10636983 |
61888479 |
61888502 |
2 |
- |
28162770 |
PL21 |
viability |
GAGAATGTGGCACCCCGGAGCGG |
CCT4 |
ENSG00000115484 |
-0.7707140398511635 |
[97] |
[24] |
-5 |
hSpCas9 |
negative selection |
10806347 |
61888370 |
61888393 |
2 |
+ |
28162770 |
PL21 |
viability |
GAGAGTGATACCTTTGGCGGCGG |
CCT4 |
ENSG00000115484 |
-3.4883604903402468 |
[360] |
[13] |
-9 |
hSpCas9 |
negative selection |
10806348 |
61888432 |
61888455 |
2 |
+ |
28162770 |
PL21 |
viability |
CCTGATAGGCGCCTTTCCCGCGG |
CCT4 |
ENSG00000115484 |
-1.2881468668201623 |
[201] |
[35] |
-7 |
hSpCas9 |
negative selection |
10806349 |
61888479 |
61888502 |
2 |
- |
28162770 |
P31FUJ |
viability |
GAGAATGTGGCACCCCGGAGCGG |
CCT4 |
ENSG00000115484 |
-1.5823866422046065 |
[78] |
[30] |
-7 |
hSpCas9 |
negative selection |
10975713 |
61888370 |
61888393 |
2 |
+ |
28162770 |
P31FUJ |
viability |
GAGAGTGATACCTTTGGCGGCGG |
CCT4 |
ENSG00000115484 |
-3.9792281278296513 |
[254] |
[18] |
-9 |
hSpCas9 |
negative selection |
10975714 |
61888432 |
61888455 |
2 |
+ |
28162770 |
P31FUJ |
viability |
CCTGATAGGCGCCTTTCCCGCGG |
CCT4 |
ENSG00000115484 |
-1.241313704269896 |
[339] |
[168] |
-7 |
hSpCas9 |
negative selection |
10975715 |
61888479 |
61888502 |
2 |
- |
28162770 |
OCIAML5 |
viability |
GAGAATGTGGCACCCCGGAGCGG |
CCT4 |
ENSG00000115484 |
-1.1652244561236274 |
[40] |
[32] |
-6 |
hSpCas9 |
negative selection |
11145079 |
61888370 |
61888393 |
2 |
+ |
28162770 |
OCIAML5 |
viability |
GAGAGTGATACCTTTGGCGGCGG |
CCT4 |
ENSG00000115484 |
-3.4650434477547494 |
[207] |
[33] |
-9 |
hSpCas9 |
negative selection |
11145080 |
61888432 |
61888455 |
2 |
+ |
28162770 |
OCIAML5 |
viability |
CCTGATAGGCGCCTTTCCCGCGG |
CCT4 |
ENSG00000115484 |
-0.8439842245661383 |
[177] |
[178] |
-5 |
hSpCas9 |
negative selection |
11145081 |
61888479 |
61888502 |
2 |
- |
28162770 |
EOL1 |
viability |
GAGAATGTGGCACCCCGGAGCGG |
CCT4 |
ENSG00000115484 |
-3.067918555744058 |
[190] |
[11] |
-9 |
hSpCas9 |
negative selection |
11314445 |
61888370 |
61888393 |
2 |
+ |
28162770 |
EOL1 |
viability |
GAGAGTGATACCTTTGGCGGCGG |
CCT4 |
ENSG00000115484 |
-6.775891946570558 |
[623] |
[2] |
-9 |
hSpCas9 |
negative selection |
11314446 |
61888432 |
61888455 |
2 |
+ |
28162770 |
EOL1 |
viability |
CCTGATAGGCGCCTTTCCCGCGG |
CCT4 |
ENSG00000115484 |
-2.04868531886668 |
[266] |
[33] |
-8 |
hSpCas9 |
negative selection |
11314447 |
61888479 |
61888502 |
2 |
- |
28162770 |
MOLM13 |
viability |
GAGAATGTGGCACCCCGGAGCGG |
CCT4 |
ENSG00000115484 |
-2.117073119176577 |
[155] |
[25] |
-7 |
hSpCas9 |
negative selection |
11483811 |
61888370 |
61888393 |
2 |
+ |
28162770 |
MOLM13 |
viability |
GAGAGTGATACCTTTGGCGGCGG |
CCT4 |
ENSG00000115484 |
-4.676040411364789 |
[494] |
[13] |
-9 |
hSpCas9 |
negative selection |
11483812 |
61888432 |
61888455 |
2 |
+ |
28162770 |
MOLM13 |
viability |
CCTGATAGGCGCCTTTCCCGCGG |
CCT4 |
ENSG00000115484 |
-1.022213932835136 |
[308] |
[109] |
-5 |
hSpCas9 |
negative selection |
11483813 |
61888479 |
61888502 |
2 |
- |
28162770 |
HEL |
viability |
GAGAATGTGGCACCCCGGAGCGG |
CCT4 |
ENSG00000115484 |
-0.5195325968985202 |
[140] |
[62] |
-4 |
hSpCas9 |
negative selection |
11653177 |
61888370 |
61888393 |
2 |
+ |
28162770 |
HEL |
viability |
GAGAGTGATACCTTTGGCGGCGG |
CCT4 |
ENSG00000115484 |
-3.7370333374592897 |
[457] |
[21] |
-9 |
hSpCas9 |
negative selection |
11653178 |
61888432 |
61888455 |
2 |
+ |
28162770 |
HEL |
viability |
CCTGATAGGCGCCTTTCCCGCGG |
CCT4 |
ENSG00000115484 |
-2.794666480306941 |
[259] |
[23] |
-8 |
hSpCas9 |
negative selection |
11653179 |
61888479 |
61888502 |
2 |
- |
28162770 |
MV411 |
viability |
GAGAATGTGGCACCCCGGAGCGG |
CCT4 |
ENSG00000115484 |
-0.1498979467626097 |
[107] |
[81] |
-1 |
hSpCas9 |
negative selection |
11822543 |
61888370 |
61888393 |
2 |
+ |
28162770 |
MV411 |
viability |
GAGAGTGATACCTTTGGCGGCGG |
CCT4 |
ENSG00000115484 |
-3.04013903931381 |
[331] |
[33] |
-9 |
hSpCas9 |
negative selection |
11822544 |
61888432 |
61888455 |
2 |
+ |
28162770 |
MV411 |
viability |
CCTGATAGGCGCCTTTCCCGCGG |
CCT4 |
ENSG00000115484 |
-2.1430219257754026 |
[193] |
[36] |
-8 |
hSpCas9 |
negative selection |
11822545 |
61888479 |
61888502 |
2 |
- |
28162770 |
MONOMAC1 |
viability |
GAGAATGTGGCACCCCGGAGCGG |
CCT4 |
ENSG00000115484 |
-1.5296121861464247 |
[67] |
[26] |
-8 |
hSpCas9 |
negative selection |
11991909 |
61888370 |
61888393 |
2 |
+ |
28162770 |
MONOMAC1 |
viability |
GAGAGTGATACCTTTGGCGGCGG |
CCT4 |
ENSG00000115484 |
-2.1521826112752933 |
[189] |
[48] |
-9 |
hSpCas9 |
negative selection |
11991910 |
61888432 |
61888455 |
2 |
+ |
28162770 |
MONOMAC1 |
viability |
CCTGATAGGCGCCTTTCCCGCGG |
CCT4 |
ENSG00000115484 |
-1.3438782353888246 |
[123] |
[55] |
-7 |
hSpCas9 |
negative selection |
11991911 |
61888479 |
61888502 |
2 |
- |
28162770 |
OCIAML2 |
viability |
GAGAATGTGGCACCCCGGAGCGG |
CCT4 |
ENSG00000115484 |
-1.0258449825692653 |
[17] |
[48] |
-6 |
hSpCas9 |
negative selection |
12161275 |
61888370 |
61888393 |
2 |
+ |
28162770 |
OCIAML2 |
viability |
GAGAGTGATACCTTTGGCGGCGG |
CCT4 |
ENSG00000115484 |
-2.6097925729137863 |
[86] |
[78] |
-8 |
hSpCas9 |
negative selection |
12161276 |
61888432 |
61888455 |
2 |
+ |
28162770 |
OCIAML2 |
viability |
CCTGATAGGCGCCTTTCCCGCGG |
CCT4 |
ENSG00000115484 |
-1.2260074565222476 |
[45] |
[108] |
-7 |
hSpCas9 |
negative selection |
12161277 |
61888479 |
61888502 |
2 |
- |
28162770 |
OCIAML3 |
viability |
GAGAATGTGGCACCCCGGAGCGG |
CCT4 |
ENSG00000115484 |
-0.18461670418646137 |
[31] |
[84] |
-1 |
hSpCas9 |
negative selection |
12330641 |
61888370 |
61888393 |
2 |
+ |
28162770 |
OCIAML3 |
viability |
GAGAGTGATACCTTTGGCGGCGG |
CCT4 |
ENSG00000115484 |
-5.053439258961461 |
[87] |
[7] |
-9 |
hSpCas9 |
negative selection |
12330642 |
61888432 |
61888455 |
2 |
+ |
28162770 |
OCIAML3 |
viability |
CCTGATAGGCGCCTTTCCCGCGG |
CCT4 |
ENSG00000115484 |
-2.3152916122580995 |
[60] |
[36] |
-9 |
hSpCas9 |
negative selection |
12330643 |