99439118 |
99439141 |
7 |
+ |
26472758 |
Jiyoye |
viability |
GTTTGACTTGGAGATCGCGGTGG |
CPSF4 |
ENSG00000160917 |
-1.80948067028143 |
[250] |
[53] |
-8 |
hSpCas9 |
negative selection |
36549 |
99439118 |
99439141 |
7 |
+ |
26472758 |
KBM7 |
viability |
GTTTGACTTGGAGATCGCGGTGG |
CPSF4 |
ENSG00000160917 |
-1.8977162669342496 |
[862,481] |
[142,28] |
-8 |
hSpCas9 |
negative selection |
227667 |
99439118 |
99439141 |
7 |
+ |
26472758 |
Raji |
viability |
GTTTGACTTGGAGATCGCGGTGG |
CPSF4 |
ENSG00000160917 |
-0.5010379381715455 |
[371] |
[60] |
-4 |
hSpCas9 |
negative selection |
418785 |
99439118 |
99439141 |
7 |
+ |
26472758 |
K562 |
viability |
GTTTGACTTGGAGATCGCGGTGG |
CPSF4 |
ENSG00000160917 |
-1.75288716316429 |
[534] |
[133] |
-7 |
hSpCas9 |
negative selection |
609903 |
99439130 |
99439153 |
7 |
+ |
26627737 |
DLD1 |
viability |
GATCGCGGTGGAGCAGCAGCTGG |
CPSF4 |
ENSG00000160917 |
-0.7747416656354922 |
[212] |
[18,49,46] |
-6 |
hSpCas9 |
negative selection |
837567 |
99444828 |
99444851 |
7 |
- |
26627737 |
DLD1 |
viability |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
1.591658917608394 |
[29] |
[37,50,0] |
9 |
hSpCas9 |
negative selection |
837568 |
99447805 |
99447828 |
7 |
+ |
26627737 |
DLD1 |
viability |
GGTCTCCGTGCCAGCCAGGATGG |
CPSF4 |
ENSG00000160917 |
0.38031521434596605 |
[146] |
[87,17,69] |
4 |
hSpCas9 |
negative selection |
837569 |
99448181 |
99448204 |
7 |
+ |
26627737 |
DLD1 |
viability |
TGCGTGGCCTATGCAAGAAAGGG |
CPSF4 |
ENSG00000160917 |
-3.2160987300502395 |
[775] |
[5,4,60] |
-9 |
hSpCas9 |
negative selection |
837570 |
99439130 |
99439153 |
7 |
+ |
26627737 |
GBM cells |
viability after 5 days |
GATCGCGGTGGAGCAGCAGCTGG |
CPSF4 |
ENSG00000160917 |
-0.6294650974691034 |
[74] |
[27,23] |
-7 |
hSpCas9 |
negative selection |
919882 |
99444828 |
99444851 |
7 |
- |
26627737 |
GBM cells |
viability after 5 days |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
-1.4092084204766464 |
[51] |
[10,9] |
-9 |
hSpCas9 |
negative selection |
919883 |
99447805 |
99447828 |
7 |
+ |
26627737 |
GBM cells |
viability after 5 days |
GGTCTCCGTGCCAGCCAGGATGG |
CPSF4 |
ENSG00000160917 |
-0.3706931848715944 |
[87] |
[45,26] |
-5 |
hSpCas9 |
negative selection |
919884 |
99448181 |
99448204 |
7 |
+ |
26627737 |
GBM cells |
viability after 5 days |
TGCGTGGCCTATGCAAGAAAGGG |
CPSF4 |
ENSG00000160917 |
-0.17376362960098257 |
[630] |
[297,301] |
-3 |
hSpCas9 |
negative selection |
919885 |
99439130 |
99439153 |
7 |
+ |
26627737 |
GBM cells |
viability after 13 days |
GATCGCGGTGGAGCAGCAGCTGG |
CPSF4 |
ENSG00000160917 |
-1.6163952863932398 |
[74] |
[4,19] |
-9 |
hSpCas9 |
negative selection |
1002197 |
99444828 |
99444851 |
7 |
- |
26627737 |
GBM cells |
viability after 13 days |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
-1.0872172583321258 |
[51] |
[20,6] |
-8 |
hSpCas9 |
negative selection |
1002198 |
99447805 |
99447828 |
7 |
+ |
26627737 |
GBM cells |
viability after 13 days |
GGTCTCCGTGCCAGCCAGGATGG |
CPSF4 |
ENSG00000160917 |
-0.23042373464027466 |
[87] |
[59,24] |
-3 |
hSpCas9 |
negative selection |
1002199 |
99448181 |
99448204 |
7 |
+ |
26627737 |
GBM cells |
viability after 13 days |
TGCGTGGCCTATGCAAGAAAGGG |
CPSF4 |
ENSG00000160917 |
-0.5604064908700548 |
[630] |
[283,189] |
-6 |
hSpCas9 |
negative selection |
1002200 |
99439130 |
99439153 |
7 |
+ |
26627737 |
GBM cells |
viability after 21 days |
GATCGCGGTGGAGCAGCAGCTGG |
CPSF4 |
ENSG00000160917 |
-1.4839865169881425 |
[74] |
[12,15] |
-8 |
hSpCas9 |
negative selection |
1084512 |
99444828 |
99444851 |
7 |
- |
26627737 |
GBM cells |
viability after 21 days |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
-2.3783688599028743 |
[51] |
[6,3] |
-9 |
hSpCas9 |
negative selection |
1084513 |
99447805 |
99447828 |
7 |
+ |
26627737 |
GBM cells |
viability after 21 days |
GGTCTCCGTGCCAGCCAGGATGG |
CPSF4 |
ENSG00000160917 |
0.4840169759820232 |
[87] |
[69,63] |
5 |
hSpCas9 |
negative selection |
1084514 |
99448181 |
99448204 |
7 |
+ |
26627737 |
GBM cells |
viability after 21 days |
TGCGTGGCCTATGCAAGAAAGGG |
CPSF4 |
ENSG00000160917 |
-1.0955327030189494 |
[630] |
[173,147] |
-7 |
hSpCas9 |
negative selection |
1084515 |
99439130 |
99439153 |
7 |
+ |
26627737 |
RPE1 |
viability after 9 days |
GATCGCGGTGGAGCAGCAGCTGG |
CPSF4 |
ENSG00000160917 |
-2.5762712479548395 |
[772] |
[16,70] |
-9 |
hSpCas9 |
negative selection |
1166827 |
99444828 |
99444851 |
7 |
- |
26627737 |
RPE1 |
viability after 9 days |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
0.10353427724908659 |
[92] |
[15,50] |
0 |
hSpCas9 |
negative selection |
1166828 |
99447805 |
99447828 |
7 |
+ |
26627737 |
RPE1 |
viability after 9 days |
GGTCTCCGTGCCAGCCAGGATGG |
CPSF4 |
ENSG00000160917 |
1.9116069257008022 |
[238] |
[160,436] |
8 |
hSpCas9 |
negative selection |
1166829 |
99448181 |
99448204 |
7 |
+ |
26627737 |
RPE1 |
viability after 9 days |
TGCGTGGCCTATGCAAGAAAGGG |
CPSF4 |
ENSG00000160917 |
-0.6114485365524079 |
[1926] |
[362,435] |
-4 |
hSpCas9 |
negative selection |
1166830 |
99439130 |
99439153 |
7 |
+ |
26627737 |
RPE1 |
viability after 12 days |
GATCGCGGTGGAGCAGCAGCTGG |
CPSF4 |
ENSG00000160917 |
-5.873299898809801 |
[772] |
[4,1] |
-9 |
hSpCas9 |
negative selection |
1249142 |
99444828 |
99444851 |
7 |
- |
26627737 |
RPE1 |
viability after 12 days |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
0.7522112986559892 |
[92] |
[27,56] |
5 |
hSpCas9 |
negative selection |
1249143 |
99447805 |
99447828 |
7 |
+ |
26627737 |
RPE1 |
viability after 12 days |
GGTCTCCGTGCCAGCCAGGATGG |
CPSF4 |
ENSG00000160917 |
0.8062751838933917 |
[238] |
[70,155] |
5 |
hSpCas9 |
negative selection |
1249144 |
99448181 |
99448204 |
7 |
+ |
26627737 |
RPE1 |
viability after 12 days |
TGCGTGGCCTATGCAAGAAAGGG |
CPSF4 |
ENSG00000160917 |
-1.3257320864125455 |
[1926] |
[156,258] |
-7 |
hSpCas9 |
negative selection |
1249145 |
99439130 |
99439153 |
7 |
+ |
26627737 |
RPE1 |
viability after 15 days |
GATCGCGGTGGAGCAGCAGCTGG |
CPSF4 |
ENSG00000160917 |
-3.3457038443409948 |
[772] |
[20,21] |
-9 |
hSpCas9 |
negative selection |
1331457 |
99444828 |
99444851 |
7 |
- |
26627737 |
RPE1 |
viability after 15 days |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
0.5839724523854786 |
[92] |
[14,62] |
3 |
hSpCas9 |
negative selection |
1331458 |
99447805 |
99447828 |
7 |
+ |
26627737 |
RPE1 |
viability after 15 days |
GGTCTCCGTGCCAGCCAGGATGG |
CPSF4 |
ENSG00000160917 |
2.207089602338859 |
[238] |
[217,402] |
9 |
hSpCas9 |
negative selection |
1331459 |
99448181 |
99448204 |
7 |
+ |
26627737 |
RPE1 |
viability after 15 days |
TGCGTGGCCTATGCAAGAAAGGG |
CPSF4 |
ENSG00000160917 |
-1.4674126191099879 |
[1926] |
[189,203] |
-7 |
hSpCas9 |
negative selection |
1331460 |
99439130 |
99439153 |
7 |
+ |
26627737 |
RPE1 |
viability after 18 days |
GATCGCGGTGGAGCAGCAGCTGG |
CPSF4 |
ENSG00000160917 |
-2.447045073424933 |
[772] |
[1,76] |
-8 |
hSpCas9 |
negative selection |
1413772 |
99444828 |
99444851 |
7 |
- |
26627737 |
RPE1 |
viability after 18 days |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
0.25100429930306545 |
[92] |
[25,33] |
1 |
hSpCas9 |
negative selection |
1413773 |
99447805 |
99447828 |
7 |
+ |
26627737 |
RPE1 |
viability after 18 days |
GGTCTCCGTGCCAGCCAGGATGG |
CPSF4 |
ENSG00000160917 |
0.7750633363532793 |
[238] |
[62,160] |
5 |
hSpCas9 |
negative selection |
1413774 |
99448181 |
99448204 |
7 |
+ |
26627737 |
RPE1 |
viability after 18 days |
TGCGTGGCCTATGCAAGAAAGGG |
CPSF4 |
ENSG00000160917 |
-1.6438952300425207 |
[1926] |
[119,215] |
-7 |
hSpCas9 |
negative selection |
1413775 |
99439130 |
99439153 |
7 |
+ |
26627737 |
HeLa |
viability after 8 days |
GATCGCGGTGGAGCAGCAGCTGG |
CPSF4 |
ENSG00000160917 |
0.42490258071369924 |
[176] |
[105,178,30] |
4 |
hSpCas9 |
negative selection |
1496087 |
99444828 |
99444851 |
7 |
- |
26627737 |
HeLa |
viability after 8 days |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
-2.6814689778393537 |
[47] |
[0,0,6] |
-9 |
hSpCas9 |
negative selection |
1496088 |
99447805 |
99447828 |
7 |
+ |
26627737 |
HeLa |
viability after 8 days |
GGTCTCCGTGCCAGCCAGGATGG |
CPSF4 |
ENSG00000160917 |
-0.7936499949077422 |
[282] |
[132,55,39] |
-7 |
hSpCas9 |
negative selection |
1496089 |
99448181 |
99448204 |
7 |
+ |
26627737 |
HeLa |
viability after 8 days |
TGCGTGGCCTATGCAAGAAAGGG |
CPSF4 |
ENSG00000160917 |
0.41902008317898987 |
[871] |
[408,623,469] |
4 |
hSpCas9 |
negative selection |
1496090 |
99439130 |
99439153 |
7 |
+ |
26627737 |
HeLa |
viability after 12 days |
GATCGCGGTGGAGCAGCAGCTGG |
CPSF4 |
ENSG00000160917 |
-0.13238737615398488 |
[176] |
[126,37,39] |
-1 |
hSpCas9 |
negative selection |
1578402 |
99444828 |
99444851 |
7 |
- |
26627737 |
HeLa |
viability after 12 days |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
0.7998189297146179 |
[47] |
[0,30,70] |
6 |
hSpCas9 |
negative selection |
1578403 |
99447805 |
99447828 |
7 |
+ |
26627737 |
HeLa |
viability after 12 days |
GGTCTCCGTGCCAGCCAGGATGG |
CPSF4 |
ENSG00000160917 |
-0.8201402186869349 |
[282] |
[39,46,112] |
-6 |
hSpCas9 |
negative selection |
1578404 |
99448181 |
99448204 |
7 |
+ |
26627737 |
HeLa |
viability after 12 days |
TGCGTGGCCTATGCAAGAAAGGG |
CPSF4 |
ENSG00000160917 |
-0.10986645643870485 |
[871] |
[457,271,281] |
-1 |
hSpCas9 |
negative selection |
1578405 |
99439130 |
99439153 |
7 |
+ |
26627737 |
HeLa |
viability after 15 days |
GATCGCGGTGGAGCAGCAGCTGG |
CPSF4 |
ENSG00000160917 |
-0.6622199001238418 |
[176] |
[4,75,56] |
-5 |
hSpCas9 |
negative selection |
1660717 |
99444828 |
99444851 |
7 |
- |
26627737 |
HeLa |
viability after 15 days |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
0.37755989156459435 |
[47] |
[3,3,71] |
3 |
hSpCas9 |
negative selection |
1660718 |
99447805 |
99447828 |
7 |
+ |
26627737 |
HeLa |
viability after 15 days |
GGTCTCCGTGCCAGCCAGGATGG |
CPSF4 |
ENSG00000160917 |
-0.3944490605566345 |
[282] |
[103,79,77] |
-3 |
hSpCas9 |
negative selection |
1660719 |
99448181 |
99448204 |
7 |
+ |
26627737 |
HeLa |
viability after 15 days |
TGCGTGGCCTATGCAAGAAAGGG |
CPSF4 |
ENSG00000160917 |
0.20805397969935835 |
[871] |
[481,436,301] |
1 |
hSpCas9 |
negative selection |
1660720 |
99439130 |
99439153 |
7 |
+ |
26627737 |
HeLa |
viability after 18 days |
GATCGCGGTGGAGCAGCAGCTGG |
CPSF4 |
ENSG00000160917 |
-0.5752841288819437 |
[176] |
[3,68,56] |
-5 |
hSpCas9 |
negative selection |
1743032 |
99444828 |
99444851 |
7 |
- |
26627737 |
HeLa |
viability after 18 days |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
0.35002427836752403 |
[47] |
[1,2,71] |
3 |
hSpCas9 |
negative selection |
1743033 |
99447805 |
99447828 |
7 |
+ |
26627737 |
HeLa |
viability after 18 days |
GGTCTCCGTGCCAGCCAGGATGG |
CPSF4 |
ENSG00000160917 |
-0.35912711988969764 |
[282] |
[70,69,77] |
-3 |
hSpCas9 |
negative selection |
1743034 |
99448181 |
99448204 |
7 |
+ |
26627737 |
HeLa |
viability after 18 days |
TGCGTGGCCTATGCAAGAAAGGG |
CPSF4 |
ENSG00000160917 |
0.21583904700623147 |
[871] |
[329,358,301] |
1 |
hSpCas9 |
negative selection |
1743035 |
99439130 |
99439153 |
7 |
+ |
26627737 |
HCT116 |
viability after 6 days |
GATCGCGGTGGAGCAGCAGCTGG |
CPSF4 |
ENSG00000160917 |
-1.0045680514056015 |
[333] |
[69,1] |
-5 |
hSpCas9 |
negative selection |
1825347 |
99444828 |
99444851 |
7 |
- |
26627737 |
HCT116 |
viability after 6 days |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
-3.510180215019322 |
[123] |
[2,0] |
-9 |
hSpCas9 |
negative selection |
1825348 |
99447805 |
99447828 |
7 |
+ |
26627737 |
HCT116 |
viability after 6 days |
GGTCTCCGTGCCAGCCAGGATGG |
CPSF4 |
ENSG00000160917 |
-1.221025036638025 |
[426] |
[51,15] |
-6 |
hSpCas9 |
negative selection |
1825349 |
99448181 |
99448204 |
7 |
+ |
26627737 |
HCT116 |
viability after 6 days |
TGCGTGGCCTATGCAAGAAAGGG |
CPSF4 |
ENSG00000160917 |
-0.131768519008588 |
[1085] |
[412,13] |
0 |
hSpCas9 |
negative selection |
1825350 |
99439130 |
99439153 |
7 |
+ |
26627737 |
HCT116 |
viability after 8 days |
GATCGCGGTGGAGCAGCAGCTGG |
CPSF4 |
ENSG00000160917 |
-1.9336317482018643 |
[163] |
[11,54,3] |
-9 |
hSpCas9 |
negative selection |
1907662 |
99444828 |
99444851 |
7 |
- |
26627737 |
HCT116 |
viability after 8 days |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
0.2579331873256847 |
[33] |
[15,20,29] |
3 |
hSpCas9 |
negative selection |
1907663 |
99447805 |
99447828 |
7 |
+ |
26627737 |
HCT116 |
viability after 8 days |
GGTCTCCGTGCCAGCCAGGATGG |
CPSF4 |
ENSG00000160917 |
0.6621596574783887 |
[119] |
[122,66,123] |
6 |
hSpCas9 |
negative selection |
1907664 |
99448181 |
99448204 |
7 |
+ |
26627737 |
HCT116 |
viability after 8 days |
TGCGTGGCCTATGCAAGAAAGGG |
CPSF4 |
ENSG00000160917 |
-0.4397812373590432 |
[741] |
[330,286,286] |
-5 |
hSpCas9 |
negative selection |
1907665 |
99439130 |
99439153 |
7 |
+ |
26627737 |
HCT116 |
viability after 9 days |
GATCGCGGTGGAGCAGCAGCTGG |
CPSF4 |
ENSG00000160917 |
-2.1393459382907825 |
[333] |
[36,6] |
-8 |
hSpCas9 |
negative selection |
1989977 |
99444828 |
99444851 |
7 |
- |
26627737 |
HCT116 |
viability after 9 days |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
0.7061623025643471 |
[123] |
[29,72] |
5 |
hSpCas9 |
negative selection |
1989978 |
99447805 |
99447828 |
7 |
+ |
26627737 |
HCT116 |
viability after 9 days |
GGTCTCCGTGCCAGCCAGGATGG |
CPSF4 |
ENSG00000160917 |
0.538173837702986 |
[426] |
[369,3] |
4 |
hSpCas9 |
negative selection |
1989979 |
99448181 |
99448204 |
7 |
+ |
26627737 |
HCT116 |
viability after 9 days |
TGCGTGGCCTATGCAAGAAAGGG |
CPSF4 |
ENSG00000160917 |
0.1639173411459145 |
[1085] |
[306,338] |
1 |
hSpCas9 |
negative selection |
1989980 |
99439130 |
99439153 |
7 |
+ |
26627737 |
HCT116 |
viability after 12 days |
GATCGCGGTGGAGCAGCAGCTGG |
CPSF4 |
ENSG00000160917 |
0.0018680256150682695 |
[163] |
[66,61,130] |
0 |
hSpCas9 |
negative selection |
2072292 |
99444828 |
99444851 |
7 |
- |
26627737 |
HCT116 |
viability after 12 days |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
-0.9033531447526828 |
[33] |
[7,17,2] |
-7 |
hSpCas9 |
negative selection |
2072293 |
99447805 |
99447828 |
7 |
+ |
26627737 |
HCT116 |
viability after 12 days |
GGTCTCCGTGCCAGCCAGGATGG |
CPSF4 |
ENSG00000160917 |
0.21046809569623126 |
[119] |
[92,66,56] |
2 |
hSpCas9 |
negative selection |
2072294 |
99448181 |
99448204 |
7 |
+ |
26627737 |
HCT116 |
viability after 12 days |
TGCGTGGCCTATGCAAGAAAGGG |
CPSF4 |
ENSG00000160917 |
-0.9146908605698731 |
[741] |
[191,171,256] |
-7 |
hSpCas9 |
negative selection |
2072295 |
99439130 |
99439153 |
7 |
+ |
26627737 |
HCT116 |
viability after 15 days |
GATCGCGGTGGAGCAGCAGCTGG |
CPSF4 |
ENSG00000160917 |
-0.9147665407344074 |
[163] |
[53,15,79] |
-7 |
hSpCas9 |
negative selection |
2154607 |
99444828 |
99444851 |
7 |
- |
26627737 |
HCT116 |
viability after 15 days |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
-0.03694621101510487 |
[33] |
[2,20,30] |
0 |
hSpCas9 |
negative selection |
2154608 |
99447805 |
99447828 |
7 |
+ |
26627737 |
HCT116 |
viability after 15 days |
GGTCTCCGTGCCAGCCAGGATGG |
CPSF4 |
ENSG00000160917 |
0.3190682864600478 |
[119] |
[73,57,123] |
3 |
hSpCas9 |
negative selection |
2154609 |
99448181 |
99448204 |
7 |
+ |
26627737 |
HCT116 |
viability after 15 days |
TGCGTGGCCTATGCAAGAAAGGG |
CPSF4 |
ENSG00000160917 |
-0.909457590615155 |
[741] |
[257,167,257] |
-7 |
hSpCas9 |
negative selection |
2154610 |
99439130 |
99439153 |
7 |
+ |
26627737 |
HCT116 |
viability after 18 days |
GATCGCGGTGGAGCAGCAGCTGG |
CPSF4 |
ENSG00000160917 |
-0.42363002831458285 |
[163] |
[71,30,76] |
-4 |
hSpCas9 |
negative selection |
2236922 |
99444828 |
99444851 |
7 |
- |
26627737 |
HCT116 |
viability after 18 days |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
-1.3436289776799288 |
[33] |
[1,11,4] |
-8 |
hSpCas9 |
negative selection |
2236923 |
99447805 |
99447828 |
7 |
+ |
26627737 |
HCT116 |
viability after 18 days |
GGTCTCCGTGCCAGCCAGGATGG |
CPSF4 |
ENSG00000160917 |
0.536475102364018 |
[119] |
[62,87,101] |
4 |
hSpCas9 |
negative selection |
2236924 |
99448181 |
99448204 |
7 |
+ |
26627737 |
HCT116 |
viability after 18 days |
TGCGTGGCCTATGCAAGAAAGGG |
CPSF4 |
ENSG00000160917 |
-1.079127237567168 |
[741] |
[101,234,167] |
-7 |
hSpCas9 |
negative selection |
2236925 |
99439081 |
99439104 |
7 |
- |
24336569 |
HL60 |
viability |
GCTGGCGATGATTTCCTGCATGG |
CPSF4 |
ENSG00000160917 |
-2.851082912113854 |
[565] |
[165] |
-9 |
hSpCas9 |
negative selection |
2258718 |
99439099 |
99439122 |
7 |
- |
24336569 |
HL60 |
viability |
AAACTTGATGTGGTCCACGCTGG |
CPSF4 |
ENSG00000160917 |
-1.1851609972576516 |
[619] |
[576] |
-8 |
hSpCas9 |
negative selection |
2258719 |
99439106 |
99439129 |
7 |
+ |
24336569 |
HL60 |
viability |
GGACCACATCAAGTTTGACTTGG |
CPSF4 |
ENSG00000160917 |
0.27444609368770095 |
[578] |
[1481] |
2 |
hSpCas9 |
negative selection |
2258720 |
99439115 |
99439138 |
7 |
+ |
24336569 |
HL60 |
viability |
CAAGTTTGACTTGGAGATCGCGG |
CPSF4 |
ENSG00000160917 |
-2.405481544238986 |
[690] |
[275] |
-9 |
hSpCas9 |
negative selection |
2258721 |
99439130 |
99439153 |
7 |
+ |
24336569 |
HL60 |
viability |
GATCGCGGTGGAGCAGCAGCTGG |
CPSF4 |
ENSG00000160917 |
-1.2460124473930598 |
[769] |
[686] |
-8 |
hSpCas9 |
negative selection |
2258722 |
99439173 |
99439196 |
7 |
- |
24336569 |
HL60 |
viability |
CCGCGCTCACTGTCCATGCCGGG |
CPSF4 |
ENSG00000160917 |
0.08460857531780946 |
[499] |
[1121] |
0 |
hSpCas9 |
negative selection |
2258723 |
99444818 |
99444841 |
7 |
+ |
24336569 |
HL60 |
viability |
TTGAAAGCTGCCTGCGGCAAAGG |
CPSF4 |
ENSG00000160917 |
-0.38884388694710337 |
[184] |
[298] |
-3 |
hSpCas9 |
negative selection |
2258724 |
99444828 |
99444851 |
7 |
- |
24336569 |
HL60 |
viability |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
-0.1947241125199004 |
[297] |
[550] |
-2 |
hSpCas9 |
negative selection |
2258725 |
99448129 |
99448152 |
7 |
+ |
24336569 |
HL60 |
viability |
TGTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-3.25385314202269 |
[878] |
[194] |
-9 |
hSpCas9 |
negative selection |
2258726 |
99448140 |
99448163 |
7 |
- |
24336569 |
HL60 |
viability |
CTGTCTTCTCACCACTGATGTGG |
CPSF4 |
ENSG00000160917 |
-1.6954826346341356 |
[325] |
[212] |
-9 |
hSpCas9 |
negative selection |
2258727 |
99439081 |
99439104 |
7 |
- |
24336569 |
KBM7 |
viability |
GCTGGCGATGATTTCCTGCATGG |
CPSF4 |
ENSG00000160917 |
-3.8456102705220365 |
[505] |
[95] |
-9 |
hSpCas9 |
negative selection |
2325895 |
99439099 |
99439122 |
7 |
- |
24336569 |
KBM7 |
viability |
AAACTTGATGTGGTCCACGCTGG |
CPSF4 |
ENSG00000160917 |
-1.0834005819982224 |
[497] |
[640] |
-7 |
hSpCas9 |
negative selection |
2325896 |
99439106 |
99439129 |
7 |
+ |
24336569 |
KBM7 |
viability |
GGACCACATCAAGTTTGACTTGG |
CPSF4 |
ENSG00000160917 |
-1.67721848197348 |
[631] |
[538] |
-8 |
hSpCas9 |
negative selection |
2325897 |
99439115 |
99439138 |
7 |
+ |
24336569 |
KBM7 |
viability |
CAAGTTTGACTTGGAGATCGCGG |
CPSF4 |
ENSG00000160917 |
-3.681151417015398 |
[474] |
[100] |
-9 |
hSpCas9 |
negative selection |
2325898 |
99439130 |
99439153 |
7 |
+ |
24336569 |
KBM7 |
viability |
GATCGCGGTGGAGCAGCAGCTGG |
CPSF4 |
ENSG00000160917 |
-1.6627334519841928 |
[728] |
[627] |
-8 |
hSpCas9 |
negative selection |
2325899 |
99439173 |
99439196 |
7 |
- |
24336569 |
KBM7 |
viability |
CCGCGCTCACTGTCCATGCCGGG |
CPSF4 |
ENSG00000160917 |
-0.3448196221236817 |
[297] |
[639] |
-3 |
hSpCas9 |
negative selection |
2325900 |
99444818 |
99444841 |
7 |
+ |
24336569 |
KBM7 |
viability |
TTGAAAGCTGCCTGCGGCAAAGG |
CPSF4 |
ENSG00000160917 |
0.6734362044124835 |
[119] |
[521] |
6 |
hSpCas9 |
negative selection |
2325901 |
99444828 |
99444851 |
7 |
- |
24336569 |
KBM7 |
viability |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
-1.640825272225814 |
[342] |
[299] |
-8 |
hSpCas9 |
negative selection |
2325902 |
99448129 |
99448152 |
7 |
+ |
24336569 |
KBM7 |
viability |
TGTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-3.0874036323045573 |
[669] |
[214] |
-9 |
hSpCas9 |
negative selection |
2325903 |
99448140 |
99448163 |
7 |
- |
24336569 |
KBM7 |
viability |
CTGTCTTCTCACCACTGATGTGG |
CPSF4 |
ENSG00000160917 |
-2.3285616214236984 |
[406] |
[220] |
-8 |
hSpCas9 |
negative selection |
2325904 |
99438990 |
99439013 |
7 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
AGGAGTGTGTGCGGCGGGGCCGG |
CPSF4 |
ENSG00000160917 |
3.8392727140504386 |
[2,5] |
[23,3] |
9 |
dCas9-VP64 |
positive selection |
2445992 |
99438940 |
99438963 |
7 |
- |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
GCCGCCGCCCGAGGGATGCCGGG |
CPSF4 |
ENSG00000160917 |
1.546627597135376 |
[77,326] |
[199,56] |
6 |
dCas9-VP64 |
positive selection |
2445993 |
99439011 |
99439034 |
7 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
GGCGGCGGGTAAAGGCGAGAAGG |
CPSF4 |
ENSG00000160917 |
1.0971660408543222 |
[30,142] |
[8,75] |
4 |
dCas9-VP64 |
positive selection |
2445994 |
99438990 |
99439013 |
7 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
AGGAGTGTGTGCGGCGGGGCCGG |
CPSF4 |
ENSG00000160917 |
-0.19653926077008488 |
[60,8] |
[15,3] |
-2 |
dCas9-VP64 |
positive selection |
2541247 |
99438940 |
99438963 |
7 |
- |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
GCCGCCGCCCGAGGGATGCCGGG |
CPSF4 |
ENSG00000160917 |
-0.5868613351444434 |
[45,104] |
[11,19] |
-6 |
dCas9-VP64 |
positive selection |
2541248 |
99439011 |
99439034 |
7 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
GGCGGCGGGTAAAGGCGAGAAGG |
CPSF4 |
ENSG00000160917 |
-0.5128525256785441 |
[84,202] |
[38,25] |
-5 |
dCas9-VP64 |
positive selection |
2541249 |
99448206 |
99448229 |
7 |
- |
27453484 |
HT29 |
resistance to T3SS1-dependent cytotoxicity |
ACTCATGCAGGAACTCACACTGG |
CPSF4 |
ENSG00000160917 |
-0.6927363152977608 |
[1,1] |
[0,0] |
-8 |
hSpCas9 |
positive selection |
2980942 |
99439172 |
99439195 |
7 |
- |
27453484 |
HT29 |
resistance to T3SS1-dependent cytotoxicity |
CGCGCTCACTGTCCATGCCGGGG |
CPSF4 |
ENSG00000160917 |
-0.4277322629449848 |
[3,2] |
[3,0] |
-6 |
hSpCas9 |
positive selection |
2980943 |
99448183 |
99448206 |
7 |
+ |
27453484 |
HT29 |
resistance to T3SS1-dependent cytotoxicity |
GCGTGGCCTATGCAAGAAAGGGG |
CPSF4 |
ENSG00000160917 |
-0.7513369502864291 |
[3,4] |
[2,0] |
-8 |
hSpCas9 |
positive selection |
2980944 |
99439119 |
99439142 |
7 |
+ |
27453484 |
HT29 |
resistance to T3SS1-dependent cytotoxicity |
GTTTGACTTGGAGATCGCGGTGG |
CPSF4 |
ENSG00000160917 |
-0.024162542537871035 |
[2,2] |
[0,3] |
0 |
hSpCas9 |
positive selection |
2980945 |
99448206 |
99448229 |
7 |
- |
27453484 |
HT29 |
resistance to T3SS2-dependent cytotoxicity |
ACTCATGCAGGAACTCACACTGG |
CPSF4 |
ENSG00000160917 |
-0.8232935470999914 |
[1,1] |
[0,0] |
-9 |
hSpCas9 |
positive selection |
3048800 |
99439172 |
99439195 |
7 |
- |
27453484 |
HT29 |
resistance to T3SS2-dependent cytotoxicity |
CGCGCTCACTGTCCATGCCGGGG |
CPSF4 |
ENSG00000160917 |
-1.103767306021632 |
[3,3] |
[0,0] |
-9 |
hSpCas9 |
positive selection |
3048801 |
99448183 |
99448206 |
7 |
+ |
27453484 |
HT29 |
resistance to T3SS2-dependent cytotoxicity |
GCGTGGCCTATGCAAGAAAGGGG |
CPSF4 |
ENSG00000160917 |
-0.07448039018469924 |
[3,3] |
[3,1] |
-1 |
hSpCas9 |
positive selection |
3048802 |
99439119 |
99439142 |
7 |
+ |
27453484 |
HT29 |
resistance to T3SS2-dependent cytotoxicity |
GTTTGACTTGGAGATCGCGGTGG |
CPSF4 |
ENSG00000160917 |
-0.9888077524516445 |
[2,2] |
[0,0] |
-9 |
hSpCas9 |
positive selection |
3048803 |
99448180 |
99448203 |
|
+ |
24336571 |
A375 |
resistance to PLX after 7 days |
CTGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
-0.17149533340013562 |
[16,19] |
[16,15] |
-5 |
hSpCas9 |
positive selection |
3107206 |
99444828 |
99444851 |
|
- |
24336571 |
A375 |
resistance to PLX after 7 days |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
0.41901439494767245 |
[8,10] |
[12,13] |
9 |
hSpCas9 |
positive selection |
3107208 |
99448129 |
99448152 |
|
+ |
24336571 |
A375 |
resistance to PLX after 7 days |
TGTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
0.5010828885564997 |
[3,3] |
[5,5] |
9 |
hSpCas9 |
positive selection |
3107209 |
99448180 |
99448203 |
|
+ |
24336571 |
A375 |
resistance to PLX after 14 days |
CTGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
-0.3772509876678817 |
[17,17] |
[6,4] |
-4 |
hSpCas9 |
positive selection |
3164999 |
99444828 |
99444851 |
|
- |
24336571 |
A375 |
resistance to PLX after 14 days |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
0.5088034866641785 |
[7,7] |
[3,5] |
5 |
hSpCas9 |
positive selection |
3165001 |
99448129 |
99448152 |
|
+ |
24336571 |
A375 |
resistance to PLX after 14 days |
TGTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
0.9669830244442681 |
[4,4] |
[4,2] |
7 |
hSpCas9 |
positive selection |
3165002 |
99448180 |
99448203 |
|
+ |
24336571 |
A375 |
viability after 7 days |
CTGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
0.37574566143380256 |
[14] |
[16,19] |
6 |
hSpCas9 |
negative selection |
3222792 |
99444828 |
99444851 |
|
- |
24336571 |
A375 |
viability after 7 days |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
-1.2508259938568735 |
[25] |
[8,10] |
-9 |
hSpCas9 |
negative selection |
3222794 |
99448129 |
99448152 |
|
+ |
24336571 |
A375 |
viability after 7 days |
TGTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-1.76951839816797 |
[15] |
[3,3] |
-9 |
hSpCas9 |
negative selection |
3222795 |
99448180 |
99448203 |
|
+ |
24336571 |
A375 |
viability after 14 days |
CTGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
0.3063807881533412 |
[14] |
[17,17] |
4 |
hSpCas9 |
negative selection |
3280585 |
99444828 |
99444851 |
|
- |
24336571 |
A375 |
viability after 14 days |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
-1.6190969960084123 |
[25] |
[7,7] |
-9 |
hSpCas9 |
negative selection |
3280587 |
99448129 |
99448152 |
|
+ |
24336571 |
A375 |
viability after 14 days |
TGTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-1.6264572476559929 |
[15] |
[4,4] |
-9 |
hSpCas9 |
negative selection |
3280588 |
99448129 |
99448152 |
7 |
+ |
27383988 |
293T |
resistance to West Nile virus (flavivirus) |
TGTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
0.3466687859143972 |
[91,148] |
[0,0] |
1 |
hSpCas9 |
positive selection |
3344422 |
99444828 |
99444851 |
7 |
- |
27383988 |
293T |
resistance to West Nile virus (flavivirus) |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
1.7948974511203601 |
[57,29] |
[0,0] |
7 |
hSpCas9 |
positive selection |
3344423 |
99448180 |
99448203 |
7 |
+ |
27383988 |
293T |
resistance to West Nile virus (flavivirus) |
CTGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
1.2319151954549545 |
[85,43] |
[0,0] |
5 |
hSpCas9 |
positive selection |
3344424 |
99448206 |
99448229 |
7 |
- |
26780180 |
HT29 |
viability (Avana library 4 designs) |
ACTCATGCAGGAACTCACACTGG |
CPSF4 |
ENSG00000160917 |
5.35584339391676 |
[] |
[] |
9 |
hSpCas9 |
negative selection |
3417416 |
99439172 |
99439195 |
7 |
- |
26780180 |
HT29 |
viability (Avana library 4 designs) |
CGCGCTCACTGTCCATGCCGGGG |
CPSF4 |
ENSG00000160917 |
3.07986863749 |
[] |
[] |
8 |
hSpCas9 |
negative selection |
3417417 |
99448182 |
99448205 |
7 |
+ |
26780180 |
HT29 |
viability (Avana library 4 designs) |
GCGTGGCCTATGCAAGAAAGGGG |
CPSF4 |
ENSG00000160917 |
4.94698594406817 |
[] |
[] |
9 |
hSpCas9 |
negative selection |
3417418 |
99439118 |
99439141 |
7 |
+ |
26780180 |
HT29 |
viability (Avana library 4 designs) |
GTTTGACTTGGAGATCGCGGTGG |
CPSF4 |
ENSG00000160917 |
3.24773740650733 |
[] |
[] |
8 |
hSpCas9 |
negative selection |
3417419 |
99439118 |
99439141 |
7 |
+ |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
GTTTGACTTGGAGATCGCGGTGG |
CPSF4 |
ENSG00000160917 |
-8.50915638785525 |
[] |
[] |
-7 |
hSpCas9 |
negative selection |
3495408 |
99448182 |
99448205 |
7 |
+ |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
GCGTGGCCTATGCAAGAAAGGGG |
CPSF4 |
ENSG00000160917 |
0.82649910832827 |
[] |
[] |
1 |
hSpCas9 |
negative selection |
3495409 |
99448206 |
99448229 |
7 |
- |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
ACTCATGCAGGAACTCACACTGG |
CPSF4 |
ENSG00000160917 |
-14.9518751457919 |
[] |
[] |
-9 |
hSpCas9 |
negative selection |
3495410 |
99439172 |
99439195 |
7 |
- |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
CGCGCTCACTGTCCATGCCGGGG |
CPSF4 |
ENSG00000160917 |
-12.7685617003433 |
[] |
[] |
-8 |
hSpCas9 |
negative selection |
3495411 |
99448247 |
99448270 |
7 |
- |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
CTTGGAGTAGAAGTAGCACTCGG |
CPSF4 |
ENSG00000160917 |
-6.75955678253321 |
[] |
[] |
-6 |
hSpCas9 |
negative selection |
3495412 |
99439161 |
99439184 |
7 |
- |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
TCCATGCCGGGGAAGGGCAGCGG |
CPSF4 |
ENSG00000160917 |
-10.5897867698088 |
[] |
[] |
-8 |
hSpCas9 |
negative selection |
3495413 |
99439118 |
99439141 |
7 |
+ |
26780180 |
A375 |
viability (Avana lentiGuide) |
GTTTGACTTGGAGATCGCGGTGG |
CPSF4 |
ENSG00000160917 |
27.9010146714473 |
[] |
[] |
9 |
hSpCas9 |
negative selection |
3604067 |
99448182 |
99448205 |
7 |
+ |
26780180 |
A375 |
viability (Avana lentiGuide) |
GCGTGGCCTATGCAAGAAAGGGG |
CPSF4 |
ENSG00000160917 |
16.4006369440715 |
[] |
[] |
8 |
hSpCas9 |
negative selection |
3604068 |
99448206 |
99448229 |
7 |
- |
26780180 |
A375 |
viability (Avana lentiGuide) |
ACTCATGCAGGAACTCACACTGG |
CPSF4 |
ENSG00000160917 |
27.2703837522001 |
[] |
[] |
9 |
hSpCas9 |
negative selection |
3604069 |
99439172 |
99439195 |
7 |
- |
26780180 |
A375 |
viability (Avana lentiGuide) |
CGCGCTCACTGTCCATGCCGGGG |
CPSF4 |
ENSG00000160917 |
26.5607013588582 |
[] |
[] |
9 |
hSpCas9 |
negative selection |
3604070 |
99448247 |
99448270 |
7 |
- |
26780180 |
A375 |
viability (Avana lentiGuide) |
CTTGGAGTAGAAGTAGCACTCGG |
CPSF4 |
ENSG00000160917 |
11.5273110785971 |
[] |
[] |
7 |
hSpCas9 |
negative selection |
3604071 |
99439161 |
99439184 |
7 |
- |
26780180 |
A375 |
viability (Avana lentiGuide) |
TCCATGCCGGGGAAGGGCAGCGG |
CPSF4 |
ENSG00000160917 |
22.3868500796768 |
[] |
[] |
9 |
hSpCas9 |
negative selection |
3604072 |
99439118 |
99439141 |
7 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
GTTTGACTTGGAGATCGCGGTGG |
CPSF4 |
ENSG00000160917 |
-1.273639959627693 |
[4] |
[0,1] |
-9 |
hSpCas9 |
positive selection |
3712726 |
99448182 |
99448205 |
7 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
GCGTGGCCTATGCAAGAAAGGGG |
CPSF4 |
ENSG00000160917 |
-0.08465642240283865 |
[5] |
[5,4] |
-1 |
hSpCas9 |
positive selection |
3712727 |
99448206 |
99448229 |
7 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
ACTCATGCAGGAACTCACACTGG |
CPSF4 |
ENSG00000160917 |
-2.2551806112217325 |
[3] |
[0,0] |
-9 |
hSpCas9 |
positive selection |
3712728 |
99439172 |
99439195 |
7 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
CGCGCTCACTGTCCATGCCGGGG |
CPSF4 |
ENSG00000160917 |
-1.3247325653259663 |
[5] |
[0,1] |
-9 |
hSpCas9 |
positive selection |
3712729 |
99448247 |
99448270 |
7 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
CTTGGAGTAGAAGTAGCACTCGG |
CPSF4 |
ENSG00000160917 |
0.026886242322580037 |
[5] |
[5,5] |
0 |
hSpCas9 |
positive selection |
3712730 |
99439161 |
99439184 |
7 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
TCCATGCCGGGGAAGGGCAGCGG |
CPSF4 |
ENSG00000160917 |
-0.33678533917792275 |
[3] |
[3,2] |
-5 |
hSpCas9 |
positive selection |
3712731 |
99439118 |
99439141 |
7 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
GTTTGACTTGGAGATCGCGGTGG |
CPSF4 |
ENSG00000160917 |
-0.4175655576203357 |
[5] |
[2,2] |
-5 |
hSpCas9 |
positive selection |
3821333 |
99448182 |
99448205 |
7 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
GCGTGGCCTATGCAAGAAAGGGG |
CPSF4 |
ENSG00000160917 |
-0.6816630486336394 |
[6] |
[3,2] |
-7 |
hSpCas9 |
positive selection |
3821334 |
99448206 |
99448229 |
7 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
ACTCATGCAGGAACTCACACTGG |
CPSF4 |
ENSG00000160917 |
-1.8190247143089993 |
[5] |
[0,1] |
-9 |
hSpCas9 |
positive selection |
3821335 |
99439172 |
99439195 |
7 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
CGCGCTCACTGTCCATGCCGGGG |
CPSF4 |
ENSG00000160917 |
-1.1275436673242272 |
[5] |
[3,0] |
-8 |
hSpCas9 |
positive selection |
3821336 |
99448247 |
99448270 |
7 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
CTTGGAGTAGAAGTAGCACTCGG |
CPSF4 |
ENSG00000160917 |
-0.7036567863388605 |
[6] |
[1,3] |
-7 |
hSpCas9 |
positive selection |
3821337 |
99439161 |
99439184 |
7 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
TCCATGCCGGGGAAGGGCAGCGG |
CPSF4 |
ENSG00000160917 |
-2.051546362282939 |
[3] |
[0,0] |
-9 |
hSpCas9 |
positive selection |
3821338 |
99448180 |
99448203 |
7 |
+ |
26780180 |
A375 |
viability |
CTGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
0.829060171953829 |
[] |
[] |
3 |
hSpCas9 |
negative selection |
3929365 |
99444828 |
99444851 |
7 |
- |
26780180 |
A375 |
viability |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
1.43703452417529 |
[] |
[] |
8 |
hSpCas9 |
negative selection |
3929366 |
99448129 |
99448152 |
7 |
+ |
26780180 |
A375 |
viability |
TGTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
2.5266568761726 |
[] |
[] |
9 |
hSpCas9 |
negative selection |
3929367 |
99448180 |
99448203 |
7 |
+ |
26780180 |
HT29 |
viability (GeCKOv2 library) |
CTGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
0.747671484340971 |
[] |
[] |
3 |
hSpCas9 |
negative selection |
4037331 |
99444828 |
99444851 |
7 |
- |
26780180 |
HT29 |
viability (GeCKOv2 library) |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
1.81663298795073 |
[] |
[] |
8 |
hSpCas9 |
negative selection |
4037332 |
99448129 |
99448152 |
7 |
+ |
26780180 |
HT29 |
viability (GeCKOv2 library) |
TGTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
1.42629307733921 |
[] |
[] |
7 |
hSpCas9 |
negative selection |
4037333 |
99448180 |
99448203 |
7 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiCRISPRv1) |
CTGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
-0.05500049413394617 |
[4] |
[2,2] |
-1 |
hSpCas9 |
positive selection |
4129445 |
99444828 |
99444851 |
7 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiCRISPRv1) |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
-0.17334309748251725 |
[3] |
[2,2] |
-4 |
hSpCas9 |
positive selection |
4129447 |
99448129 |
99448152 |
7 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiCRISPRv1) |
TGTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-0.13624869088240002 |
[3] |
[1,1] |
-3 |
hSpCas9 |
positive selection |
4129448 |
99448180 |
99448203 |
7 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiGuide) |
CTGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
0.40636541132303056 |
[3] |
[3,4,2,0] |
3 |
hSpCas9 |
positive selection |
4193467 |
99444828 |
99444851 |
7 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiGuide) |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
-0.4291707025814543 |
[3] |
[0,1,0,0] |
-6 |
hSpCas9 |
positive selection |
4193469 |
99448129 |
99448152 |
7 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiGuide) |
TGTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-0.6608284472852355 |
[3] |
[0,0,0,0] |
-8 |
hSpCas9 |
positive selection |
4193470 |
99448129 |
99448152 |
7 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
TGTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-0.44896033488678455 |
[3] |
[2,1] |
-7 |
hSpCas9 |
positive selection |
4264702 |
99444828 |
99444851 |
7 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
-0.7753388563915196 |
[1] |
[0,0] |
-9 |
hSpCas9 |
positive selection |
4264703 |
99448180 |
99448203 |
7 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
CTGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
-0.19319224379087038 |
[2] |
[2,0] |
-4 |
hSpCas9 |
positive selection |
4264704 |
99448130 |
99448152 |
7 |
+ |
27760321 |
OCIAML3 |
viability |
GTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-1.110533797360932 |
[694,540] |
[210,236] |
-7 |
hSpCas9 |
negative selection |
4391503 |
99448181 |
99448203 |
7 |
+ |
27760321 |
OCIAML3 |
viability |
TGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
-3.2605012538676945 |
[355,272] |
[21,29] |
-9 |
hSpCas9 |
negative selection |
4391504 |
99448218 |
99448240 |
7 |
- |
27760321 |
OCIAML3 |
viability |
GGTCATGTCATACTCATGCAGG |
CPSF4 |
ENSG00000160917 |
-1.6288430937885978 |
[713,665] |
[174,173] |
-8 |
hSpCas9 |
negative selection |
4391505 |
99448130 |
99448152 |
7 |
+ |
27760321 |
OCIAML2 |
viability |
GTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-1.7138248774454714 |
[694,540] |
[162,135] |
-9 |
hSpCas9 |
negative selection |
4474966 |
99448181 |
99448203 |
7 |
+ |
27760321 |
OCIAML2 |
viability |
TGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
-2.8047290755223684 |
[355,272] |
[36,34] |
-9 |
hSpCas9 |
negative selection |
4474967 |
99448218 |
99448240 |
7 |
- |
27760321 |
OCIAML2 |
viability |
GGTCATGTCATACTCATGCAGG |
CPSF4 |
ENSG00000160917 |
-2.997302364507781 |
[713,665] |
[37,111] |
-9 |
hSpCas9 |
negative selection |
4474968 |
99448130 |
99448152 |
7 |
+ |
27760321 |
MV411 |
viability |
GTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-0.5762760210288218 |
[694,540] |
[56,593] |
-4 |
hSpCas9 |
negative selection |
4558429 |
99448181 |
99448203 |
7 |
+ |
27760321 |
MV411 |
viability |
TGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
-1.659198896096662 |
[355,272] |
[81,39] |
-8 |
hSpCas9 |
negative selection |
4558430 |
99448218 |
99448240 |
7 |
- |
27760321 |
MV411 |
viability |
GGTCATGTCATACTCATGCAGG |
CPSF4 |
ENSG00000160917 |
-1.9938090228191854 |
[713,665] |
[79,165] |
-8 |
hSpCas9 |
negative selection |
4558431 |
99448130 |
99448152 |
7 |
+ |
27760321 |
HL60 |
viability |
GTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-1.8609027127903657 |
[694,540] |
[121,154] |
-9 |
hSpCas9 |
negative selection |
4641892 |
99448181 |
99448203 |
7 |
+ |
27760321 |
HL60 |
viability |
TGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
-2.363175357057825 |
[355,272] |
[67,29] |
-9 |
hSpCas9 |
negative selection |
4641893 |
99448218 |
99448240 |
7 |
- |
27760321 |
HL60 |
viability |
GGTCATGTCATACTCATGCAGG |
CPSF4 |
ENSG00000160917 |
-1.9855251557598566 |
[713,665] |
[171,110] |
-9 |
hSpCas9 |
negative selection |
4641894 |
99448130 |
99448152 |
7 |
+ |
27760321 |
HT1080 |
viability |
GTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-4.527450191149286 |
[540,421] |
[14,0] |
-8 |
hSpCas9 |
negative selection |
4725355 |
99448181 |
99448203 |
7 |
+ |
27760321 |
HT1080 |
viability |
TGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
-6.596967555961216 |
[272,212] |
[0,0] |
-9 |
hSpCas9 |
negative selection |
4725356 |
99448218 |
99448240 |
7 |
- |
27760321 |
HT1080 |
viability |
GGTCATGTCATACTCATGCAGG |
CPSF4 |
ENSG00000160917 |
-7.884107530381864 |
[665,519] |
[0,0] |
-9 |
hSpCas9 |
negative selection |
4725357 |
99448130 |
99448152 |
7 |
+ |
27760321 |
HT29 |
viability after 7 days |
GTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-0.1659587336769947 |
[540,421] |
[800,461,430] |
-2 |
hSpCas9 |
negative selection |
4808818 |
99448181 |
99448203 |
7 |
+ |
27760321 |
HT29 |
viability after 7 days |
TGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
0.49200667383699104 |
[272,212] |
[444,327,541] |
7 |
hSpCas9 |
negative selection |
4808819 |
99448218 |
99448240 |
7 |
- |
27760321 |
HT29 |
viability after 7 days |
GGTCATGTCATACTCATGCAGG |
CPSF4 |
ENSG00000160917 |
-0.851420630801119 |
[665,519] |
[503,328,444] |
-8 |
hSpCas9 |
negative selection |
4808820 |
99448130 |
99448152 |
7 |
+ |
27760321 |
HT29 |
viability after 25 days |
GTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-1.607380904670105 |
[540,421] |
[120,150,283] |
-7 |
hSpCas9 |
negative selection |
4892281 |
99448181 |
99448203 |
7 |
+ |
27760321 |
HT29 |
viability after 25 days |
TGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
-8.11664982080774 |
[272,212] |
[0,0,0] |
-9 |
hSpCas9 |
negative selection |
4892282 |
99448218 |
99448240 |
7 |
- |
27760321 |
HT29 |
viability after 25 days |
GGTCATGTCATACTCATGCAGG |
CPSF4 |
ENSG00000160917 |
-5.985610740279148 |
[665,519] |
[0,0,32] |
-9 |
hSpCas9 |
negative selection |
4892283 |
99448130 |
99448152 |
7 |
+ |
27760321 |
HT29 |
viability after 22 days |
GTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-1.1082044965224798 |
[540,421] |
[167,248,360] |
-7 |
hSpCas9 |
negative selection |
4975744 |
99448181 |
99448203 |
7 |
+ |
27760321 |
HT29 |
viability after 22 days |
TGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
-6.9241940258547805 |
[272,212] |
[0,0,4] |
-9 |
hSpCas9 |
negative selection |
4975745 |
99448218 |
99448240 |
7 |
- |
27760321 |
HT29 |
viability after 22 days |
GGTCATGTCATACTCATGCAGG |
CPSF4 |
ENSG00000160917 |
-5.669040724924517 |
[665,519] |
[0,0,38] |
-9 |
hSpCas9 |
negative selection |
4975746 |
99448130 |
99448152 |
7 |
+ |
27760321 |
HT29 |
viability after 19 days |
GTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-1.5939078210035458 |
[540,421] |
[285,116,155] |
-7 |
hSpCas9 |
negative selection |
5059207 |
99448181 |
99448203 |
7 |
+ |
27760321 |
HT29 |
viability after 19 days |
TGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
-8.118128400243787 |
[272,212] |
[0,0,0] |
-9 |
hSpCas9 |
negative selection |
5059208 |
99448218 |
99448240 |
7 |
- |
27760321 |
HT29 |
viability after 19 days |
GGTCATGTCATACTCATGCAGG |
CPSF4 |
ENSG00000160917 |
-9.405268374664434 |
[665,519] |
[0,0,0] |
-9 |
hSpCas9 |
negative selection |
5059209 |
99448130 |
99448152 |
7 |
+ |
27760321 |
HT29 |
viability after 16 days |
GTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-0.7076765124183033 |
[540,421] |
[479,239,285] |
-6 |
hSpCas9 |
negative selection |
5142670 |
99448181 |
99448203 |
7 |
+ |
27760321 |
HT29 |
viability after 16 days |
TGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
-8.086663947822865 |
[272,212] |
[0,0,0] |
-9 |
hSpCas9 |
negative selection |
5142671 |
99448218 |
99448240 |
7 |
- |
27760321 |
HT29 |
viability after 16 days |
GGTCATGTCATACTCATGCAGG |
CPSF4 |
ENSG00000160917 |
-5.261038572844615 |
[665,519] |
[34,0,17] |
-9 |
hSpCas9 |
negative selection |
5142672 |
99448130 |
99448152 |
7 |
+ |
27760321 |
HT29 |
viability after 13 days |
GTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-0.784166502446507 |
[540,421] |
[387,279,305] |
-7 |
hSpCas9 |
negative selection |
5226133 |
99448181 |
99448203 |
7 |
+ |
27760321 |
HT29 |
viability after 13 days |
TGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
-7.110440473058075 |
[272,212] |
[0,0,3] |
-9 |
hSpCas9 |
negative selection |
5226134 |
99448218 |
99448240 |
7 |
- |
27760321 |
HT29 |
viability after 13 days |
GGTCATGTCATACTCATGCAGG |
CPSF4 |
ENSG00000160917 |
-6.701192269468345 |
[665,519] |
[4,10,3] |
-9 |
hSpCas9 |
negative selection |
5226135 |
99448130 |
99448152 |
7 |
+ |
27760321 |
HT29 |
viability after 10 days |
GTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-0.6626233560780901 |
[540,421] |
[463,256,413] |
-6 |
hSpCas9 |
negative selection |
5309596 |
99448181 |
99448203 |
7 |
+ |
27760321 |
HT29 |
viability after 10 days |
TGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
-2.0202593389035033 |
[272,212] |
[120,86,17] |
-9 |
hSpCas9 |
negative selection |
5309597 |
99448218 |
99448240 |
7 |
- |
27760321 |
HT29 |
viability after 10 days |
GGTCATGTCATACTCATGCAGG |
CPSF4 |
ENSG00000160917 |
-3.6814052840350087 |
[665,519] |
[44,100,28] |
-9 |
hSpCas9 |
negative selection |
5309598 |
99448130 |
99448152 |
7 |
+ |
27760321 |
MOLM13 |
viability |
GTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-2.1248342797693582 |
[694,540] |
[53,100] |
-8 |
hSpCas9 |
negative selection |
5393059 |
99448181 |
99448203 |
7 |
+ |
27760321 |
MOLM13 |
viability |
TGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
-0.3798127158741211 |
[355,272] |
[2,247] |
-2 |
hSpCas9 |
negative selection |
5393060 |
99448218 |
99448240 |
7 |
- |
27760321 |
MOLM13 |
viability |
GGTCATGTCATACTCATGCAGG |
CPSF4 |
ENSG00000160917 |
-1.4502736466482107 |
[713,665] |
[195,96] |
-7 |
hSpCas9 |
negative selection |
5393061 |
99438933 |
99438956 |
7 |
+ |
27661255 |
K562 |
viability |
GGGCGCTCCCGGCATCCCTCGGG |
CPSF4 |
ENSG00000160917 |
-3.405861715635474 |
[1287,1327] |
[131,69] |
-9 |
dCas9-KRAB |
negative selection |
5472572 |
99438967 |
99438990 |
7 |
+ |
27661255 |
K562 |
viability |
GCGGCGGCGAGGCGAAGCGAAGG |
CPSF4 |
ENSG00000160917 |
-3.0034269630216626 |
[0,30] |
[0,1] |
-9 |
dCas9-KRAB |
negative selection |
5472573 |
99438970 |
99438993 |
7 |
+ |
27661255 |
K562 |
viability |
GCGGCGAGGCGAAGCGAAGGAGG |
CPSF4 |
ENSG00000160917 |
-2.984545077761301 |
[56,36] |
[0,7] |
-9 |
dCas9-KRAB |
negative selection |
5472574 |
99439332 |
99439355 |
7 |
- |
27661255 |
K562 |
viability |
GACTCTCAAGACCTAGAGGGAGG |
CPSF4 |
ENSG00000160917 |
0.017515106934892888 |
[154,162] |
[162,98] |
0 |
dCas9-KRAB |
negative selection |
5472575 |
99439336 |
99439359 |
7 |
- |
27661255 |
K562 |
viability |
GAGGGACTCTCAAGACCTAGAGG |
CPSF4 |
ENSG00000160917 |
-0.044809633213779954 |
[390,610] |
[480,302] |
-2 |
dCas9-KRAB |
negative selection |
5472576 |
99448129 |
99448152 |
7 |
+ |
27260156 |
BXPC3 |
viability |
TGTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-0.628346494899579 |
[908] |
[546,447,800,688] |
-8 |
hSpCas9 |
negative selection |
5537162 |
99444828 |
99444851 |
7 |
- |
27260156 |
BXPC3 |
viability |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
0.2788929388875778 |
[168] |
[181,198,219,265] |
6 |
hSpCas9 |
negative selection |
5537163 |
99448180 |
99448203 |
7 |
+ |
27260156 |
BXPC3 |
viability |
CTGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
0.058801531247092975 |
[304] |
[344,369,245,363] |
1 |
hSpCas9 |
negative selection |
5537164 |
99448129 |
99448152 |
7 |
+ |
27260156 |
A673 |
viability |
TGTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-0.2576574748060463 |
[908] |
[1121,851,859,837] |
-6 |
hSpCas9 |
negative selection |
5658413 |
99444828 |
99444851 |
7 |
- |
27260156 |
A673 |
viability |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
0.4820654979232154 |
[168] |
[299,225,270,342] |
9 |
hSpCas9 |
negative selection |
5658414 |
99448180 |
99448203 |
7 |
+ |
27260156 |
A673 |
viability |
CTGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
0.13450979517169664 |
[304] |
[385,431,351,436] |
3 |
hSpCas9 |
negative selection |
5658415 |
99448129 |
99448152 |
7 |
+ |
27260156 |
A375 |
viability |
TGTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-1.700620522663383 |
[908] |
[259,427,406,234] |
-9 |
hSpCas9 |
negative selection |
5779664 |
99444828 |
99444851 |
7 |
- |
27260156 |
A375 |
viability |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
0.22916729557740467 |
[168] |
[162,134,337,269] |
3 |
hSpCas9 |
negative selection |
5779665 |
99448180 |
99448203 |
7 |
+ |
27260156 |
A375 |
viability |
CTGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
0.43262754266561637 |
[304] |
[227,570,660,472] |
6 |
hSpCas9 |
negative selection |
5779666 |
99448129 |
99448152 |
7 |
+ |
27260156 |
COLO741 |
viability |
TGTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-0.3864761764585005 |
[908] |
[852,994,817] |
-7 |
hSpCas9 |
negative selection |
5900915 |
99444828 |
99444851 |
7 |
- |
27260156 |
COLO741 |
viability |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
0.05258979196412428 |
[168] |
[231,201,236] |
1 |
hSpCas9 |
negative selection |
5900916 |
99448180 |
99448203 |
7 |
+ |
27260156 |
COLO741 |
viability |
CTGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
0.4268038258868568 |
[304] |
[544,570,460] |
8 |
hSpCas9 |
negative selection |
5900917 |
99448129 |
99448152 |
7 |
+ |
27260156 |
CAL120 |
viability |
TGTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-1.5411816446828492 |
[908] |
[480,380,318] |
-9 |
hSpCas9 |
negative selection |
6022166 |
99444828 |
99444851 |
7 |
- |
27260156 |
CAL120 |
viability |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
-0.2311846281641381 |
[168] |
[223,131,187] |
-3 |
hSpCas9 |
negative selection |
6022167 |
99448180 |
99448203 |
7 |
+ |
27260156 |
CAL120 |
viability |
CTGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
1.1105625167408304 |
[304] |
[567,617,1226] |
9 |
hSpCas9 |
negative selection |
6022168 |
99448129 |
99448152 |
7 |
+ |
27260156 |
CADOES1 |
viability |
TGTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-0.8578378330348033 |
[908] |
[429,417,421,600] |
-9 |
hSpCas9 |
negative selection |
6143417 |
99444828 |
99444851 |
7 |
- |
27260156 |
CADOES1 |
viability |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
0.0425655140158292 |
[168] |
[151,167,205,119] |
0 |
hSpCas9 |
negative selection |
6143418 |
99448180 |
99448203 |
7 |
+ |
27260156 |
CADOES1 |
viability |
CTGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
0.5341430125056086 |
[304] |
[434,355,387,465] |
8 |
hSpCas9 |
negative selection |
6143419 |
99448129 |
99448152 |
7 |
+ |
27260156 |
EWS502 |
viability |
TGTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-0.969647043997286 |
[908] |
[363,488,512,623] |
-8 |
hSpCas9 |
negative selection |
6264668 |
99444828 |
99444851 |
7 |
- |
27260156 |
EWS502 |
viability |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
0.40591011378830966 |
[168] |
[173,227,331,221] |
7 |
hSpCas9 |
negative selection |
6264669 |
99448180 |
99448203 |
7 |
+ |
27260156 |
EWS502 |
viability |
CTGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
0.49315504088441586 |
[304] |
[572,331,424,478] |
8 |
hSpCas9 |
negative selection |
6264670 |
99448129 |
99448152 |
7 |
+ |
27260156 |
EW8 |
viability |
TGTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-0.6253720752768589 |
[908] |
[639,534,354,417] |
-8 |
hSpCas9 |
negative selection |
6385919 |
99444828 |
99444851 |
7 |
- |
27260156 |
EW8 |
viability |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
0.21586490145865977 |
[168] |
[93,163,161,207] |
4 |
hSpCas9 |
negative selection |
6385920 |
99448180 |
99448203 |
7 |
+ |
27260156 |
EW8 |
viability |
CTGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
0.49881434591794144 |
[304] |
[339,296,328,431] |
8 |
hSpCas9 |
negative selection |
6385921 |
99448129 |
99448152 |
7 |
+ |
27260156 |
CORL105 |
viability |
TGTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-0.4529579467283959 |
[908] |
[679,576,1097,804] |
-7 |
hSpCas9 |
negative selection |
6507170 |
99444828 |
99444851 |
7 |
- |
27260156 |
CORL105 |
viability |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
0.05453134968496509 |
[168] |
[163,246,201,205] |
1 |
hSpCas9 |
negative selection |
6507171 |
99448180 |
99448203 |
7 |
+ |
27260156 |
CORL105 |
viability |
CTGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
0.002115657664448989 |
[304] |
[347,306,409,373] |
0 |
hSpCas9 |
negative selection |
6507172 |
99448129 |
99448152 |
7 |
+ |
27260156 |
HS294T |
viability |
TGTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-0.6880557846017381 |
[908] |
[156,115,376,233] |
-7 |
hSpCas9 |
negative selection |
6628421 |
99444828 |
99444851 |
7 |
- |
27260156 |
HS294T |
viability |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
-0.10813570562966701 |
[168] |
[63,46,37,99] |
-1 |
hSpCas9 |
negative selection |
6628422 |
99448180 |
99448203 |
7 |
+ |
27260156 |
HS294T |
viability |
CTGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
-0.005364224656129735 |
[304] |
[81,86,182,122] |
0 |
hSpCas9 |
negative selection |
6628423 |
99448129 |
99448152 |
7 |
+ |
27260156 |
HCC44 |
viability |
TGTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-1.2285368020012877 |
[908] |
[434,336,695,344] |
-9 |
hSpCas9 |
negative selection |
6749672 |
99444828 |
99444851 |
7 |
- |
27260156 |
HCC44 |
viability |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
0.4315141373537046 |
[168] |
[355,156,279,262] |
7 |
hSpCas9 |
negative selection |
6749673 |
99448180 |
99448203 |
7 |
+ |
27260156 |
HCC44 |
viability |
CTGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
0.05947872498533613 |
[304] |
[371,247,377,453] |
0 |
hSpCas9 |
negative selection |
6749674 |
99448129 |
99448152 |
7 |
+ |
27260156 |
G402 |
viability |
TGTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-2.07401250119758 |
[908] |
[421,211,183,254] |
-9 |
hSpCas9 |
negative selection |
6870923 |
99444828 |
99444851 |
7 |
- |
27260156 |
G402 |
viability |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
0.4254421831782027 |
[168] |
[466,271,332,71] |
5 |
hSpCas9 |
negative selection |
6870924 |
99448180 |
99448203 |
7 |
+ |
27260156 |
G402 |
viability |
CTGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
-0.8020536372682334 |
[304] |
[147,169,203,313] |
-7 |
hSpCas9 |
negative selection |
6870925 |
99448129 |
99448152 |
7 |
+ |
27260156 |
L33 |
viability |
TGTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-0.9566216384832265 |
[908] |
[510,152,289,525] |
-9 |
hSpCas9 |
negative selection |
6992174 |
99444828 |
99444851 |
7 |
- |
27260156 |
L33 |
viability |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
-0.13467161241530934 |
[168] |
[154,54,103,160] |
-3 |
hSpCas9 |
negative selection |
6992175 |
99448180 |
99448203 |
7 |
+ |
27260156 |
L33 |
viability |
CTGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
0.08903825912652075 |
[304] |
[397,89,244,288] |
2 |
hSpCas9 |
negative selection |
6992176 |
99448129 |
99448152 |
7 |
+ |
27260156 |
K562 |
viability |
TGTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-1.2520194243741136 |
[908] |
[328,529,102,393] |
-8 |
hSpCas9 |
negative selection |
7113425 |
99444828 |
99444851 |
7 |
- |
27260156 |
K562 |
viability |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
0.13777800376815175 |
[168] |
[73,244,29,291] |
1 |
hSpCas9 |
negative selection |
7113426 |
99448180 |
99448203 |
7 |
+ |
27260156 |
K562 |
viability |
CTGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
0.6394861622322792 |
[304] |
[540,482,65,587] |
7 |
hSpCas9 |
negative selection |
7113427 |
99448129 |
99448152 |
7 |
+ |
27260156 |
HT29 |
viability |
TGTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-0.8698096128718134 |
[908] |
[774,626,482,550] |
-8 |
hSpCas9 |
negative selection |
7234676 |
99444828 |
99444851 |
7 |
- |
27260156 |
HT29 |
viability |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
0.6142453516977077 |
[168] |
[349,383,257,276] |
9 |
hSpCas9 |
negative selection |
7234677 |
99448180 |
99448203 |
7 |
+ |
27260156 |
HT29 |
viability |
CTGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
0.2896630450122078 |
[304] |
[441,392,519,448] |
5 |
hSpCas9 |
negative selection |
7234678 |
99448129 |
99448152 |
7 |
+ |
27260156 |
MHHES1 |
viability |
TGTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-0.47781260454832525 |
[908] |
[836,882,786,499] |
-7 |
hSpCas9 |
negative selection |
7355927 |
99444828 |
99444851 |
7 |
- |
27260156 |
MHHES1 |
viability |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
-0.0003481038382702195 |
[168] |
[196,247,228,108] |
0 |
hSpCas9 |
negative selection |
7355928 |
99448180 |
99448203 |
7 |
+ |
27260156 |
MHHES1 |
viability |
CTGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
0.016306129937173175 |
[304] |
[440,349,372,251] |
0 |
hSpCas9 |
negative selection |
7355929 |
99448129 |
99448152 |
7 |
+ |
27260156 |
MEWO |
viability |
TGTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-1.1074222712465613 |
[908] |
[338,440,392] |
-9 |
hSpCas9 |
negative selection |
7477178 |
99444828 |
99444851 |
7 |
- |
27260156 |
MEWO |
viability |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
0.08182729611850093 |
[168] |
[129,113,250] |
1 |
hSpCas9 |
negative selection |
7477179 |
99448180 |
99448203 |
7 |
+ |
27260156 |
MEWO |
viability |
CTGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
-0.479000144885096 |
[304] |
[311,188,133] |
-8 |
hSpCas9 |
negative selection |
7477180 |
99448129 |
99448152 |
7 |
+ |
27260156 |
LNCAPCLONEFGC |
viability |
TGTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-1.2778143964651223 |
[908] |
[337,273,389,367] |
-9 |
hSpCas9 |
negative selection |
7598429 |
99444828 |
99444851 |
7 |
- |
27260156 |
LNCAPCLONEFGC |
viability |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
0.2154382953900933 |
[168] |
[169,157,242,150] |
3 |
hSpCas9 |
negative selection |
7598430 |
99448180 |
99448203 |
7 |
+ |
27260156 |
LNCAPCLONEFGC |
viability |
CTGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
-0.16752741826186723 |
[304] |
[309,262,242,164] |
-3 |
hSpCas9 |
negative selection |
7598431 |
99448129 |
99448152 |
7 |
+ |
27260156 |
PANC0327 |
viability |
TGTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-1.4063232177340539 |
[908] |
[413,260,266,290] |
-9 |
hSpCas9 |
negative selection |
7719680 |
99444828 |
99444851 |
7 |
- |
27260156 |
PANC0327 |
viability |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
-0.2105748695910461 |
[168] |
[169,177,113,53] |
-3 |
hSpCas9 |
negative selection |
7719681 |
99448180 |
99448203 |
7 |
+ |
27260156 |
PANC0327 |
viability |
CTGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
0.36486855339939545 |
[304] |
[349,406,295,334] |
5 |
hSpCas9 |
negative selection |
7719682 |
99448129 |
99448152 |
7 |
+ |
27260156 |
NCIH2009 |
viability |
TGTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-1.283573410972806 |
[908] |
[504,625,427] |
-8 |
hSpCas9 |
negative selection |
7840931 |
99444828 |
99444851 |
7 |
- |
27260156 |
NCIH2009 |
viability |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
0.17423637372031742 |
[168] |
[301,203,300] |
2 |
hSpCas9 |
negative selection |
7840932 |
99448180 |
99448203 |
7 |
+ |
27260156 |
NCIH2009 |
viability |
CTGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
0.18371136882971412 |
[304] |
[562,472,430] |
2 |
hSpCas9 |
negative selection |
7840933 |
99448129 |
99448152 |
7 |
+ |
27260156 |
NCIH1373 |
viability |
TGTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-1.4563813826544516 |
[908] |
[404,274,426,102] |
-9 |
hSpCas9 |
negative selection |
7962182 |
99444828 |
99444851 |
7 |
- |
27260156 |
NCIH1373 |
viability |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
0.1210488652506696 |
[168] |
[199,296,163,38] |
1 |
hSpCas9 |
negative selection |
7962183 |
99448180 |
99448203 |
7 |
+ |
27260156 |
NCIH1373 |
viability |
CTGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
1.1672024570708557 |
[304] |
[578,395,534,426] |
9 |
hSpCas9 |
negative selection |
7962184 |
99448129 |
99448152 |
7 |
+ |
27260156 |
PATU8902 |
viability |
TGTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-2.353044743793382 |
[908] |
[315,268,186,229] |
-9 |
hSpCas9 |
negative selection |
8083433 |
99444828 |
99444851 |
7 |
- |
27260156 |
PATU8902 |
viability |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
0.15983677446971134 |
[168] |
[592,271,54,167] |
1 |
hSpCas9 |
negative selection |
8083434 |
99448180 |
99448203 |
7 |
+ |
27260156 |
PATU8902 |
viability |
CTGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
-0.5371075803700602 |
[304] |
[237,399,260,276] |
-5 |
hSpCas9 |
negative selection |
8083435 |
99448129 |
99448152 |
7 |
+ |
27260156 |
PANC1 |
viability |
TGTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-1.217358557074844 |
[908] |
[358,428,315,263] |
-9 |
hSpCas9 |
negative selection |
8204684 |
99444828 |
99444851 |
7 |
- |
27260156 |
PANC1 |
viability |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
0.20499664320874111 |
[168] |
[107,185,276,110] |
3 |
hSpCas9 |
negative selection |
8204685 |
99448180 |
99448203 |
7 |
+ |
27260156 |
PANC1 |
viability |
CTGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
-0.19140651783663387 |
[304] |
[216,271,219,215] |
-3 |
hSpCas9 |
negative selection |
8204686 |
99448129 |
99448152 |
7 |
+ |
27260156 |
PANC0813 |
viability |
TGTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-0.8393156843662017 |
[908] |
[747,432,702,520] |
-8 |
hSpCas9 |
negative selection |
8325935 |
99444828 |
99444851 |
7 |
- |
27260156 |
PANC0813 |
viability |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
-0.03804292909313811 |
[168] |
[216,286,134,138] |
0 |
hSpCas9 |
negative selection |
8325936 |
99448180 |
99448203 |
7 |
+ |
27260156 |
PANC0813 |
viability |
CTGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
0.47431863876078795 |
[304] |
[588,381,585,444] |
7 |
hSpCas9 |
negative selection |
8325937 |
99448129 |
99448152 |
7 |
+ |
27260156 |
RDES |
viability |
TGTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-0.6073436038901188 |
[908] |
[602,615,679,877] |
-8 |
hSpCas9 |
negative selection |
8447186 |
99444828 |
99444851 |
7 |
- |
27260156 |
RDES |
viability |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
0.19316943390763175 |
[168] |
[234,191,198,259] |
3 |
hSpCas9 |
negative selection |
8447187 |
99448180 |
99448203 |
7 |
+ |
27260156 |
RDES |
viability |
CTGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
0.1750990147393578 |
[304] |
[299,336,615,346] |
3 |
hSpCas9 |
negative selection |
8447188 |
99448129 |
99448152 |
7 |
+ |
27260156 |
PC3 |
viability |
TGTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-0.335115460852896 |
[908] |
[499,719,1264,614] |
-6 |
hSpCas9 |
negative selection |
8568437 |
99444828 |
99444851 |
7 |
- |
27260156 |
PC3 |
viability |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
0.1976810714815913 |
[168] |
[165,80,424,184] |
4 |
hSpCas9 |
negative selection |
8568438 |
99448180 |
99448203 |
7 |
+ |
27260156 |
PC3 |
viability |
CTGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
0.428322552680434 |
[304] |
[338,267,572,512] |
8 |
hSpCas9 |
negative selection |
8568439 |
99448129 |
99448152 |
7 |
+ |
27260156 |
PATU8988T |
viability |
TGTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-1.2135025477741217 |
[908] |
[623,384,248,248] |
-9 |
hSpCas9 |
negative selection |
8689688 |
99444828 |
99444851 |
7 |
- |
27260156 |
PATU8988T |
viability |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
0.3227948177873168 |
[168] |
[157,297,158,211] |
5 |
hSpCas9 |
negative selection |
8689689 |
99448180 |
99448203 |
7 |
+ |
27260156 |
PATU8988T |
viability |
CTGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
0.1132297228081729 |
[304] |
[197,415,230,450] |
2 |
hSpCas9 |
negative selection |
8689690 |
99448129 |
99448152 |
7 |
+ |
27260156 |
T47D |
viability |
TGTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-0.6060991500146896 |
[908] |
[693,705,662,719] |
-8 |
hSpCas9 |
negative selection |
8810939 |
99444828 |
99444851 |
7 |
- |
27260156 |
T47D |
viability |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
0.27635770792299663 |
[168] |
[295,218,186,254] |
6 |
hSpCas9 |
negative selection |
8810940 |
99448180 |
99448203 |
7 |
+ |
27260156 |
T47D |
viability |
CTGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
0.12484036514463592 |
[304] |
[432,329,394,396] |
2 |
hSpCas9 |
negative selection |
8810941 |
99448129 |
99448152 |
7 |
+ |
27260156 |
SU8686 |
viability |
TGTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-1.013928468072773 |
[908] |
[401,380,536,483] |
-8 |
hSpCas9 |
negative selection |
8932190 |
99444828 |
99444851 |
7 |
- |
27260156 |
SU8686 |
viability |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
-0.19896993674308616 |
[168] |
[160,126,109,191] |
-3 |
hSpCas9 |
negative selection |
8932191 |
99448180 |
99448203 |
7 |
+ |
27260156 |
SU8686 |
viability |
CTGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
0.45197237472114093 |
[304] |
[380,406,375,505] |
7 |
hSpCas9 |
negative selection |
8932192 |
99448129 |
99448152 |
7 |
+ |
27260156 |
SKES1 |
viability |
TGTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-0.36209202673190444 |
[908] |
[698,703,773,642] |
-7 |
hSpCas9 |
negative selection |
9053441 |
99444828 |
99444851 |
7 |
- |
27260156 |
SKES1 |
viability |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
0.33490577451902515 |
[168] |
[295,295,224,69] |
7 |
hSpCas9 |
negative selection |
9053442 |
99448180 |
99448203 |
7 |
+ |
27260156 |
SKES1 |
viability |
CTGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
-0.18898568234201807 |
[304] |
[310,338,216,218] |
-4 |
hSpCas9 |
negative selection |
9053443 |
99448129 |
99448152 |
7 |
+ |
27260156 |
TOV112D |
viability |
TGTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-0.5343484199866987 |
[908] |
[644,724,702,469] |
-8 |
hSpCas9 |
negative selection |
9174692 |
99444828 |
99444851 |
7 |
- |
27260156 |
TOV112D |
viability |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
0.6725640247786939 |
[168] |
[516,298,103,188] |
9 |
hSpCas9 |
negative selection |
9174693 |
99448180 |
99448203 |
7 |
+ |
27260156 |
TOV112D |
viability |
CTGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
-0.1517539204880085 |
[304] |
[398,287,147,277] |
-3 |
hSpCas9 |
negative selection |
9174694 |
99448129 |
99448152 |
7 |
+ |
27260156 |
TC71 |
viability |
TGTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-0.21458031126983745 |
[908] |
[795,963,785,813] |
-5 |
hSpCas9 |
negative selection |
9295943 |
99444828 |
99444851 |
7 |
- |
27260156 |
TC71 |
viability |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
0.2338688656713661 |
[168] |
[217,258,179,194] |
6 |
hSpCas9 |
negative selection |
9295944 |
99448180 |
99448203 |
7 |
+ |
27260156 |
TC71 |
viability |
CTGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
0.2834424424023408 |
[304] |
[413,371,386,419] |
7 |
hSpCas9 |
negative selection |
9295945 |
99448129 |
99448152 |
7 |
+ |
27260156 |
TC32 |
viability |
TGTCCGTTTCGCCACATCAGTGG |
CPSF4 |
ENSG00000160917 |
-0.28986497171962555 |
[908] |
[665,465,893,863] |
-5 |
hSpCas9 |
negative selection |
9417194 |
99444828 |
99444851 |
7 |
- |
27260156 |
TC32 |
viability |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
0.3856583901096684 |
[168] |
[166,128,391,196] |
6 |
hSpCas9 |
negative selection |
9417195 |
99448180 |
99448203 |
7 |
+ |
27260156 |
TC32 |
viability |
CTGCGTGGCCTATGCAAGAAAGG |
CPSF4 |
ENSG00000160917 |
0.15626026779682295 |
[304] |
[287,216,491,335] |
3 |
hSpCas9 |
negative selection |
9417196 |
99439130 |
99439153 |
7 |
+ |
27869803 |
HPAFII |
viability after 27 days |
GATCGCGGTGGAGCAGCAGCTGG |
CPSF4 |
ENSG00000160917 |
-3.3357086420829707 |
[102] |
[6,3,NaN] |
-9 |
hSpCas9 |
negative selection |
9600673 |
99444828 |
99444851 |
7 |
- |
27869803 |
HPAFII |
viability after 27 days |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
-4.744844887595792 |
[50] |
[0,0,NaN] |
-9 |
hSpCas9 |
negative selection |
9600674 |
99447805 |
99447828 |
7 |
+ |
27869803 |
HPAFII |
viability after 27 days |
GGTCTCCGTGCCAGCCAGGATGG |
CPSF4 |
ENSG00000160917 |
-0.47610861233459734 |
[164] |
[45,75,NaN] |
-4 |
hSpCas9 |
negative selection |
9600675 |
99448181 |
99448204 |
7 |
+ |
27869803 |
HPAFII |
viability after 27 days |
TGCGTGGCCTATGCAAGAAAGGG |
CPSF4 |
ENSG00000160917 |
-1.3972502237907674 |
[587] |
[112,120,NaN] |
-7 |
hSpCas9 |
negative selection |
9600676 |
99439130 |
99439153 |
7 |
+ |
27869803 |
HPAFII |
viability after 15 days |
GATCGCGGTGGAGCAGCAGCTGG |
CPSF4 |
ENSG00000160917 |
-2.5836416444492483 |
[102] |
[15,19,NaN] |
-9 |
hSpCas9 |
negative selection |
9683122 |
99444828 |
99444851 |
7 |
- |
27869803 |
HPAFII |
viability after 15 days |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
-4.617277120380443 |
[50] |
[0,2,NaN] |
-9 |
hSpCas9 |
negative selection |
9683123 |
99447805 |
99447828 |
7 |
+ |
27869803 |
HPAFII |
viability after 15 days |
GGTCTCCGTGCCAGCCAGGATGG |
CPSF4 |
ENSG00000160917 |
-0.7919109889596666 |
[164] |
[160,65,NaN] |
-7 |
hSpCas9 |
negative selection |
9683124 |
99448181 |
99448204 |
7 |
+ |
27869803 |
HPAFII |
viability after 15 days |
TGCGTGGCCTATGCAAGAAAGGG |
CPSF4 |
ENSG00000160917 |
-0.5673941148082458 |
[587] |
[661,279,NaN] |
-6 |
hSpCas9 |
negative selection |
9683125 |
99439130 |
99439153 |
7 |
+ |
27869803 |
ASPC1 |
viability after 36 days |
GATCGCGGTGGAGCAGCAGCTGG |
CPSF4 |
ENSG00000160917 |
-0.6931867649212282 |
[241] |
[86,0,67] |
-6 |
hSpCas9 |
negative selection |
9765571 |
99444828 |
99444851 |
7 |
- |
27869803 |
ASPC1 |
viability after 36 days |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
-0.22737312446635993 |
[139] |
[115,7,15] |
-2 |
hSpCas9 |
negative selection |
9765572 |
99447805 |
99447828 |
7 |
+ |
27869803 |
ASPC1 |
viability after 36 days |
GGTCTCCGTGCCAGCCAGGATGG |
CPSF4 |
ENSG00000160917 |
0.03964122164230838 |
[453] |
[238,47,198] |
0 |
hSpCas9 |
negative selection |
9765573 |
99448181 |
99448204 |
7 |
+ |
27869803 |
ASPC1 |
viability after 36 days |
TGCGTGGCCTATGCAAGAAAGGG |
CPSF4 |
ENSG00000160917 |
-0.2122817608034654 |
[1370] |
[527,474,278] |
-2 |
hSpCas9 |
negative selection |
9765574 |
99439130 |
99439153 |
7 |
+ |
27869803 |
PATU8988S |
viability after 35 days |
GATCGCGGTGGAGCAGCAGCTGG |
CPSF4 |
ENSG00000160917 |
1.2993430615212596 |
[235] |
[203,263,NaN] |
9 |
hSpCas9 |
negative selection |
9848020 |
99444828 |
99444851 |
7 |
- |
27869803 |
PATU8988S |
viability after 35 days |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
0.4048782943627378 |
[134] |
[65,77,NaN] |
4 |
hSpCas9 |
negative selection |
9848021 |
99447805 |
99447828 |
7 |
+ |
27869803 |
PATU8988S |
viability after 35 days |
GGTCTCCGTGCCAGCCAGGATGG |
CPSF4 |
ENSG00000160917 |
-0.8177097917429588 |
[244] |
[47,63,NaN] |
-7 |
hSpCas9 |
negative selection |
9848022 |
99448181 |
99448204 |
7 |
+ |
27869803 |
PATU8988S |
viability after 35 days |
TGCGTGGCCTATGCAAGAAAGGG |
CPSF4 |
ENSG00000160917 |
-3.1692693215147667 |
[1228] |
[64,44,NaN] |
-9 |
hSpCas9 |
negative selection |
9848023 |
99439130 |
99439153 |
7 |
+ |
27869803 |
PATU8988S |
viability after 31 days |
GATCGCGGTGGAGCAGCAGCTGG |
CPSF4 |
ENSG00000160917 |
1.3797675723138048 |
[235] |
[254,231,NaN] |
9 |
hSpCas9 |
negative selection |
9930469 |
99444828 |
99444851 |
7 |
- |
27869803 |
PATU8988S |
viability after 31 days |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
-0.008361754910493957 |
[134] |
[49,57,NaN] |
0 |
hSpCas9 |
negative selection |
9930470 |
99447805 |
99447828 |
7 |
+ |
27869803 |
PATU8988S |
viability after 31 days |
GGTCTCCGTGCCAGCCAGGATGG |
CPSF4 |
ENSG00000160917 |
-0.65697731677351 |
[244] |
[46,80,NaN] |
-6 |
hSpCas9 |
negative selection |
9930471 |
99448181 |
99448204 |
7 |
+ |
27869803 |
PATU8988S |
viability after 31 days |
TGCGTGGCCTATGCAAGAAAGGG |
CPSF4 |
ENSG00000160917 |
-2.91715455189989 |
[1228] |
[52,79,NaN] |
-9 |
hSpCas9 |
negative selection |
9930472 |
99439130 |
99439153 |
7 |
+ |
27869803 |
HPAFII |
viability after 35 days |
GATCGCGGTGGAGCAGCAGCTGG |
CPSF4 |
ENSG00000160917 |
-5.704411974186543 |
[102] |
[0,0,NaN] |
-9 |
hSpCas9 |
negative selection |
10012918 |
99444828 |
99444851 |
7 |
- |
27869803 |
HPAFII |
viability after 35 days |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
-4.690336788974821 |
[50] |
[0,0,NaN] |
-9 |
hSpCas9 |
negative selection |
10012919 |
99447805 |
99447828 |
7 |
+ |
27869803 |
HPAFII |
viability after 35 days |
GGTCTCCGTGCCAGCCAGGATGG |
CPSF4 |
ENSG00000160917 |
0.7950460664673427 |
[164] |
[16,288,NaN] |
5 |
hSpCas9 |
negative selection |
10012920 |
99448181 |
99448204 |
7 |
+ |
27869803 |
HPAFII |
viability after 35 days |
TGCGTGGCCTATGCAAGAAAGGG |
CPSF4 |
ENSG00000160917 |
-1.8712715383253675 |
[587] |
[102,56,NaN] |
-7 |
hSpCas9 |
negative selection |
10012921 |
99439130 |
99439153 |
7 |
+ |
27869803 |
HPAFII |
viability after 31 days |
GATCGCGGTGGAGCAGCAGCTGG |
CPSF4 |
ENSG00000160917 |
-3.445193943914331 |
[102] |
[0,9,NaN] |
-9 |
hSpCas9 |
negative selection |
10095367 |
99444828 |
99444851 |
7 |
- |
27869803 |
HPAFII |
viability after 31 days |
GAGTTTCTTACCTTTGCCGCAGG |
CPSF4 |
ENSG00000160917 |
-4.839054142296238 |
[50] |
[0,0,NaN] |
-9 |
hSpCas9 |
negative selection |
10095368 |
99447805 |
99447828 |
7 |
+ |
27869803 |
HPAFII |
viability after 31 days |
GGTCTCCGTGCCAGCCAGGATGG |
CPSF4 |
ENSG00000160917 |
-0.1633848249837997 |
[164] |
[30,138,NaN] |
-1 |
hSpCas9 |
negative selection |
10095369 |
99448181 |
99448204 |
7 |
+ |
27869803 |
HPAFII |
viability after 31 days |
TGCGTGGCCTATGCAAGAAAGGG |
CPSF4 |
ENSG00000160917 |
-2.0044826651895367 |
[587] |
[109,51,NaN] |
-8 |
hSpCas9 |
negative selection |
10095370 |
99439118 |
99439141 |
7 |
+ |
28162770 |
P31FUJ |
viability |
GTTTGACTTGGAGATCGCGGTGG |
CPSF4 |
ENSG00000160917 |
-1.921787769678763 |
[344] |
[106] |
-8 |
hSpCas9 |
negative selection |
10137633 |
99439118 |
99439141 |
7 |
+ |
28162770 |
TF1 |
viability |
GTTTGACTTGGAGATCGCGGTGG |
CPSF4 |
ENSG00000160917 |
NaN |
[NaN] |
[127] |
1 |
hSpCas9 |
negative selection |
10306999 |
99439118 |
99439141 |
7 |
+ |
28162770 |
SKM1 |
viability |
GTTTGACTTGGAGATCGCGGTGG |
CPSF4 |
ENSG00000160917 |
-2.476005843172813 |
[106] |
[33] |
-9 |
hSpCas9 |
negative selection |
10476365 |
99439118 |
99439141 |
7 |
+ |
28162770 |
SKM1 |
viability |
GTTTGACTTGGAGATCGCGGTGG |
CPSF4 |
ENSG00000160917 |
-2.476005843172813 |
[106] |
[33] |
-9 |
hSpCas9 |
negative selection |
10645731 |
99439118 |
99439141 |
7 |
+ |
28162770 |
PL21 |
viability |
GTTTGACTTGGAGATCGCGGTGG |
CPSF4 |
ENSG00000160917 |
-3.1705477923178975 |
[330] |
[15] |
-9 |
hSpCas9 |
negative selection |
10815097 |
99439118 |
99439141 |
7 |
+ |
28162770 |
P31FUJ |
viability |
GTTTGACTTGGAGATCGCGGTGG |
CPSF4 |
ENSG00000160917 |
-1.921787769678763 |
[344] |
[106] |
-8 |
hSpCas9 |
negative selection |
10984463 |
99439118 |
99439141 |
7 |
+ |
28162770 |
OCIAML5 |
viability |
GTTTGACTTGGAGATCGCGGTGG |
CPSF4 |
ENSG00000160917 |
-2.208760083912036 |
[209] |
[81] |
-8 |
hSpCas9 |
negative selection |
11153829 |
99439118 |
99439141 |
7 |
+ |
28162770 |
EOL1 |
viability |
GTTTGACTTGGAGATCGCGGTGG |
CPSF4 |
ENSG00000160917 |
-1.8948799827876448 |
[599] |
[84] |
-8 |
hSpCas9 |
negative selection |
11323195 |
99439118 |
99439141 |
7 |
+ |
28162770 |
MOLM13 |
viability |
GTTTGACTTGGAGATCGCGGTGG |
CPSF4 |
ENSG00000160917 |
-3.0374370030633675 |
[510] |
[44] |
-8 |
hSpCas9 |
negative selection |
11492561 |
99439118 |
99439141 |
7 |
+ |
28162770 |
HEL |
viability |
GTTTGACTTGGAGATCGCGGTGG |
CPSF4 |
ENSG00000160917 |
-2.473870354909499 |
[424] |
[48] |
-8 |
hSpCas9 |
negative selection |
11661927 |
99439118 |
99439141 |
7 |
+ |
28162770 |
MV411 |
viability |
GTTTGACTTGGAGATCGCGGTGG |
CPSF4 |
ENSG00000160917 |
-2.454947811673286 |
[370] |
[56] |
-8 |
hSpCas9 |
negative selection |
11831293 |
99439118 |
99439141 |
7 |
+ |
28162770 |
MONOMAC1 |
viability |
GTTTGACTTGGAGATCGCGGTGG |
CPSF4 |
ENSG00000160917 |
-2.1768589651219235 |
[212] |
[53] |
-9 |
hSpCas9 |
negative selection |
12000659 |
99439118 |
99439141 |
7 |
+ |
28162770 |
OCIAML2 |
viability |
GTTTGACTTGGAGATCGCGGTGG |
CPSF4 |
ENSG00000160917 |
-3.119157454740784 |
[57] |
[36] |
-9 |
hSpCas9 |
negative selection |
12170025 |
99439118 |
99439141 |
7 |
+ |
28162770 |
OCIAML3 |
viability |
GTTTGACTTGGAGATCGCGGTGG |
CPSF4 |
ENSG00000160917 |
-3.594007640324163 |
[83] |
[20] |
-9 |
hSpCas9 |
negative selection |
12339391 |