| 158684550 |
158684573 |
3 |
- |
26472758 |
Jiyoye |
viability |
AGAGCTTGTGACCAGAAAGAGGG |
GFM1 |
ENSG00000168827 |
-0.9510162573682607 |
[140] |
[54] |
-6 |
hSpCas9 |
negative selection |
62817 |
158690249 |
158690272 |
3 |
+ |
26472758 |
Jiyoye |
viability |
GCAGGAATTAACCGACGCCATGG |
GFM1 |
ENSG00000168827 |
-0.27871602806606355 |
[110] |
[68] |
-2 |
hSpCas9 |
negative selection |
62818 |
158684550 |
158684573 |
3 |
- |
26472758 |
KBM7 |
viability |
AGAGCTTGTGACCAGAAAGAGGG |
GFM1 |
ENSG00000168827 |
-1.715102964435716 |
[447,298] |
[77,29] |
-8 |
hSpCas9 |
negative selection |
253935 |
158690249 |
158690272 |
3 |
+ |
26472758 |
KBM7 |
viability |
GCAGGAATTAACCGACGCCATGG |
GFM1 |
ENSG00000168827 |
-1.982646454350174 |
[781,429] |
[73,66] |
-8 |
hSpCas9 |
negative selection |
253936 |
158684550 |
158684573 |
3 |
- |
26472758 |
Raji |
viability |
AGAGCTTGTGACCAGAAAGAGGG |
GFM1 |
ENSG00000168827 |
-2.148956217886186 |
[171] |
[8] |
-8 |
hSpCas9 |
negative selection |
445053 |
158690249 |
158690272 |
3 |
+ |
26472758 |
Raji |
viability |
GCAGGAATTAACCGACGCCATGG |
GFM1 |
ENSG00000168827 |
-0.7110690955673353 |
[260] |
[36] |
-5 |
hSpCas9 |
negative selection |
445054 |
158684550 |
158684573 |
3 |
- |
26472758 |
K562 |
viability |
AGAGCTTGTGACCAGAAAGAGGG |
GFM1 |
ENSG00000168827 |
-1.8357516210175362 |
[295] |
[69] |
-7 |
hSpCas9 |
negative selection |
636171 |
158690249 |
158690272 |
3 |
+ |
26472758 |
K562 |
viability |
GCAGGAATTAACCGACGCCATGG |
GFM1 |
ENSG00000168827 |
-2.0115262533810276 |
[405] |
[84] |
-7 |
hSpCas9 |
negative selection |
636172 |
158644685 |
158644708 |
3 |
- |
26627737 |
DLD1 |
viability |
TCTGCCAGCCTAGGGAGGCGGGG |
GFM1 |
ENSG00000168827 |
-2.000589612083351 |
[579] |
[12,64,56] |
-8 |
hSpCas9 |
negative selection |
820238 |
158645630 |
158645653 |
3 |
+ |
26627737 |
DLD1 |
viability |
TTAATTGGAAGGCCTGCCGATGG |
GFM1 |
ENSG00000168827 |
-4.8615002801799125 |
[92] |
[0,0,0] |
-9 |
hSpCas9 |
negative selection |
820239 |
158644685 |
158644708 |
3 |
- |
26627737 |
GBM cells |
viability after 5 days |
TCTGCCAGCCTAGGGAGGCGGGG |
GFM1 |
ENSG00000168827 |
0.16083466040877098 |
[215] |
[137,120] |
2 |
hSpCas9 |
negative selection |
902553 |
158645630 |
158645653 |
3 |
+ |
26627737 |
GBM cells |
viability after 5 days |
TTAATTGGAAGGCCTGCCGATGG |
GFM1 |
ENSG00000168827 |
-0.8046931223340894 |
[56] |
[27,6] |
-8 |
hSpCas9 |
negative selection |
902554 |
158644685 |
158644708 |
3 |
- |
26627737 |
GBM cells |
viability after 13 days |
TCTGCCAGCCTAGGGAGGCGGGG |
GFM1 |
ENSG00000168827 |
-0.38270037510840205 |
[215] |
[74,101] |
-4 |
hSpCas9 |
negative selection |
984868 |
158645630 |
158645653 |
3 |
+ |
26627737 |
GBM cells |
viability after 13 days |
TTAATTGGAAGGCCTGCCGATGG |
GFM1 |
ENSG00000168827 |
-1.9952224482420862 |
[56] |
[4,9] |
-9 |
hSpCas9 |
negative selection |
984869 |
158644685 |
158644708 |
3 |
- |
26627737 |
GBM cells |
viability after 21 days |
TCTGCCAGCCTAGGGAGGCGGGG |
GFM1 |
ENSG00000168827 |
-1.2120056050127197 |
[215] |
[46,53] |
-7 |
hSpCas9 |
negative selection |
1067183 |
158645630 |
158645653 |
3 |
+ |
26627737 |
GBM cells |
viability after 21 days |
TTAATTGGAAGGCCTGCCGATGG |
GFM1 |
ENSG00000168827 |
-1.2472931177687059 |
[56] |
[11,13] |
-8 |
hSpCas9 |
negative selection |
1067184 |
158644685 |
158644708 |
3 |
- |
26627737 |
RPE1 |
viability after 9 days |
TCTGCCAGCCTAGGGAGGCGGGG |
GFM1 |
ENSG00000168827 |
0.5769235613793383 |
[446] |
[175,250] |
4 |
hSpCas9 |
negative selection |
1149498 |
158645630 |
158645653 |
3 |
+ |
26627737 |
RPE1 |
viability after 9 days |
TTAATTGGAAGGCCTGCCGATGG |
GFM1 |
ENSG00000168827 |
6.516512489963747 |
[0] |
[15,44] |
9 |
hSpCas9 |
negative selection |
1149499 |
158644685 |
158644708 |
3 |
- |
26627737 |
RPE1 |
viability after 12 days |
TCTGCCAGCCTAGGGAGGCGGGG |
GFM1 |
ENSG00000168827 |
0.023393305232407346 |
[446] |
[106,137] |
0 |
hSpCas9 |
negative selection |
1231813 |
158645630 |
158645653 |
3 |
+ |
26627737 |
RPE1 |
viability after 12 days |
TTAATTGGAAGGCCTGCCGATGG |
GFM1 |
ENSG00000168827 |
4.042952800002409 |
[0] |
[1,6] |
9 |
hSpCas9 |
negative selection |
1231814 |
158644685 |
158644708 |
3 |
- |
26627737 |
RPE1 |
viability after 15 days |
TCTGCCAGCCTAGGGAGGCGGGG |
GFM1 |
ENSG00000168827 |
-0.39341319524216745 |
[446] |
[24,164] |
-2 |
hSpCas9 |
negative selection |
1314128 |
158645630 |
158645653 |
3 |
+ |
26627737 |
RPE1 |
viability after 15 days |
TTAATTGGAAGGCCTGCCGATGG |
GFM1 |
ENSG00000168827 |
4.148889964642173 |
[0] |
[3,5] |
9 |
hSpCas9 |
negative selection |
1314129 |
158644685 |
158644708 |
3 |
- |
26627737 |
RPE1 |
viability after 18 days |
TCTGCCAGCCTAGGGAGGCGGGG |
GFM1 |
ENSG00000168827 |
-0.031761768670306 |
[446] |
[88,148] |
0 |
hSpCas9 |
negative selection |
1396443 |
158645630 |
158645653 |
3 |
+ |
26627737 |
RPE1 |
viability after 18 days |
TTAATTGGAAGGCCTGCCGATGG |
GFM1 |
ENSG00000168827 |
5.172789537711752 |
[0] |
[1,17] |
9 |
hSpCas9 |
negative selection |
1396444 |
158644685 |
158644708 |
3 |
- |
26627737 |
HeLa |
viability after 8 days |
TCTGCCAGCCTAGGGAGGCGGGG |
GFM1 |
ENSG00000168827 |
0.07697721916406391 |
[308] |
[77,288,50] |
0 |
hSpCas9 |
negative selection |
1478758 |
158645630 |
158645653 |
3 |
+ |
26627737 |
HeLa |
viability after 8 days |
TTAATTGGAAGGCCTGCCGATGG |
GFM1 |
ENSG00000168827 |
0.711521157831783 |
[25] |
[52,3,6] |
6 |
hSpCas9 |
negative selection |
1478759 |
158644685 |
158644708 |
3 |
- |
26627737 |
HeLa |
viability after 12 days |
TCTGCCAGCCTAGGGAGGCGGGG |
GFM1 |
ENSG00000168827 |
-0.5891356924768794 |
[308] |
[106,49,101] |
-5 |
hSpCas9 |
negative selection |
1561073 |
158645630 |
158645653 |
3 |
+ |
26627737 |
HeLa |
viability after 12 days |
TTAATTGGAAGGCCTGCCGATGG |
GFM1 |
ENSG00000168827 |
-0.3448406627887364 |
[25] |
[2,19,0] |
-3 |
hSpCas9 |
negative selection |
1561074 |
158644685 |
158644708 |
3 |
- |
26627737 |
HeLa |
viability after 15 days |
TCTGCCAGCCTAGGGAGGCGGGG |
GFM1 |
ENSG00000168827 |
-1.0944010437680454 |
[308] |
[16,140,15] |
-7 |
hSpCas9 |
negative selection |
1643388 |
158645630 |
158645653 |
3 |
+ |
26627737 |
HeLa |
viability after 15 days |
TTAATTGGAAGGCCTGCCGATGG |
GFM1 |
ENSG00000168827 |
1.362460777941326 |
[25] |
[76,0,0] |
8 |
hSpCas9 |
negative selection |
1643389 |
158644685 |
158644708 |
3 |
- |
26627737 |
HeLa |
viability after 18 days |
TCTGCCAGCCTAGGGAGGCGGGG |
GFM1 |
ENSG00000168827 |
-1.0401383003206641 |
[308] |
[9,123,15] |
-7 |
hSpCas9 |
negative selection |
1725703 |
158645630 |
158645653 |
3 |
+ |
26627737 |
HeLa |
viability after 18 days |
TTAATTGGAAGGCCTGCCGATGG |
GFM1 |
ENSG00000168827 |
1.1726285312161546 |
[25] |
[44,0,0] |
8 |
hSpCas9 |
negative selection |
1725704 |
158644685 |
158644708 |
3 |
- |
26627737 |
HCT116 |
viability after 6 days |
TCTGCCAGCCTAGGGAGGCGGGG |
GFM1 |
ENSG00000168827 |
0.11332748218902794 |
[522] |
[193,30] |
0 |
hSpCas9 |
negative selection |
1808018 |
158645630 |
158645653 |
3 |
+ |
26627737 |
HCT116 |
viability after 6 days |
TTAATTGGAAGGCCTGCCGATGG |
GFM1 |
ENSG00000168827 |
1.5710263613391335 |
[53] |
[21,26] |
7 |
hSpCas9 |
negative selection |
1808019 |
158644685 |
158644708 |
3 |
- |
26627737 |
HCT116 |
viability after 8 days |
TCTGCCAGCCTAGGGAGGCGGGG |
GFM1 |
ENSG00000168827 |
0.8653465325042025 |
[125] |
[42,128,204] |
7 |
hSpCas9 |
negative selection |
1890333 |
158645630 |
158645653 |
3 |
+ |
26627737 |
HCT116 |
viability after 8 days |
TTAATTGGAAGGCCTGCCGATGG |
GFM1 |
ENSG00000168827 |
0.7262055460867591 |
[22] |
[23,21,16] |
7 |
hSpCas9 |
negative selection |
1890334 |
158644685 |
158644708 |
3 |
- |
26627737 |
HCT116 |
viability after 9 days |
TCTGCCAGCCTAGGGAGGCGGGG |
GFM1 |
ENSG00000168827 |
-0.9483700300668183 |
[522] |
[106,44] |
-6 |
hSpCas9 |
negative selection |
1972648 |
158645630 |
158645653 |
3 |
+ |
26627737 |
HCT116 |
viability after 9 days |
TTAATTGGAAGGCCTGCCGATGG |
GFM1 |
ENSG00000168827 |
-3.84989769081 |
[53] |
[0,0] |
-9 |
hSpCas9 |
negative selection |
1972649 |
158644685 |
158644708 |
3 |
- |
26627737 |
HCT116 |
viability after 12 days |
TCTGCCAGCCTAGGGAGGCGGGG |
GFM1 |
ENSG00000168827 |
0.5463109891485181 |
[125] |
[61,131,99] |
5 |
hSpCas9 |
negative selection |
2054963 |
158645630 |
158645653 |
3 |
+ |
26627737 |
HCT116 |
viability after 12 days |
TTAATTGGAAGGCCTGCCGATGG |
GFM1 |
ENSG00000168827 |
0.45310824110687964 |
[22] |
[8,3,36] |
4 |
hSpCas9 |
negative selection |
2054964 |
158644685 |
158644708 |
3 |
- |
26627737 |
HCT116 |
viability after 15 days |
TCTGCCAGCCTAGGGAGGCGGGG |
GFM1 |
ENSG00000168827 |
0.6731311447077666 |
[125] |
[45,117,172] |
6 |
hSpCas9 |
negative selection |
2137278 |
158645630 |
158645653 |
3 |
+ |
26627737 |
HCT116 |
viability after 15 days |
TTAATTGGAAGGCCTGCCGATGG |
GFM1 |
ENSG00000168827 |
-1.0003307505091525 |
[22] |
[0,0,16] |
-7 |
hSpCas9 |
negative selection |
2137279 |
158644685 |
158644708 |
3 |
- |
26627737 |
HCT116 |
viability after 18 days |
TCTGCCAGCCTAGGGAGGCGGGG |
GFM1 |
ENSG00000168827 |
0.07710228338317049 |
[125] |
[39,97,51] |
0 |
hSpCas9 |
negative selection |
2219593 |
158645630 |
158645653 |
3 |
+ |
26627737 |
HCT116 |
viability after 18 days |
TTAATTGGAAGGCCTGCCGATGG |
GFM1 |
ENSG00000168827 |
-3.475009580401591 |
[22] |
[0,0,0] |
-9 |
hSpCas9 |
negative selection |
2219594 |
158672849 |
158672872 |
3 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
ATTAACCTTTATAGAAGTGCAGG |
GFM1 |
ENSG00000168827 |
2.1888077185506876 |
[74,173] |
[26,233] |
7 |
dCas9-VP64 |
positive selection |
2451377 |
158672795 |
158672818 |
3 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
GGTGTGGGGAGGGAGTCAGTGGG |
GFM1 |
ENSG00000168827 |
-1.112864874926568 |
[9,299] |
[3,27] |
-6 |
dCas9-VP64 |
positive selection |
2451378 |
158672774 |
158672797 |
3 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
TGTCAGGCACCAGCAGGTGGAGG |
GFM1 |
ENSG00000168827 |
1.3429517095508876 |
[2,12] |
[0,6] |
5 |
dCas9-VP64 |
positive selection |
2451379 |
158644359 |
158644382 |
3 |
- |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
AGTGTTTGCTCCCAGTAAGACGG |
GFM1 |
ENSG00000168827 |
-0.7644962931960313 |
[50,802] |
[9,105] |
-4 |
dCas9-VP64 |
positive selection |
2456882 |
158644335 |
158644358 |
3 |
- |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
ATAGGTATATGGGTGAGGGAAGG |
GFM1 |
ENSG00000168827 |
2.987074716099135 |
[106,15] |
[167,39] |
8 |
dCas9-VP64 |
positive selection |
2456883 |
158644402 |
158644425 |
3 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
TTGCACTTTCTCTTCCAAGTCGG |
GFM1 |
ENSG00000168827 |
-0.08121090891207533 |
[125,113] |
[6,43] |
0 |
dCas9-VP64 |
positive selection |
2456884 |
158672849 |
158672872 |
3 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
ATTAACCTTTATAGAAGTGCAGG |
GFM1 |
ENSG00000168827 |
1.362000686654543 |
[112,168] |
[156,80] |
7 |
dCas9-VP64 |
positive selection |
2546632 |
158672795 |
158672818 |
3 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
GGTGTGGGGAGGGAGTCAGTGGG |
GFM1 |
ENSG00000168827 |
0.23780804807272765 |
[76,109] |
[27,42] |
2 |
dCas9-VP64 |
positive selection |
2546633 |
158672774 |
158672797 |
3 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
TGTCAGGCACCAGCAGGTGGAGG |
GFM1 |
ENSG00000168827 |
0.4395741808250242 |
[63,44] |
[15,30] |
3 |
dCas9-VP64 |
positive selection |
2546634 |
158644359 |
158644382 |
3 |
- |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
AGTGTTTGCTCCCAGTAAGACGG |
GFM1 |
ENSG00000168827 |
-0.6154184862598697 |
[101,151] |
[26,25] |
-6 |
dCas9-VP64 |
positive selection |
2552137 |
158644335 |
158644358 |
3 |
- |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
ATAGGTATATGGGTGAGGGAAGG |
GFM1 |
ENSG00000168827 |
-0.30075641536172687 |
[144,195] |
[39,48] |
-3 |
dCas9-VP64 |
positive selection |
2552138 |
158644402 |
158644425 |
3 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
TTGCACTTTCTCTTCCAAGTCGG |
GFM1 |
ENSG00000168827 |
0.5679193197949761 |
[87,585] |
[26,285] |
4 |
dCas9-VP64 |
positive selection |
2552139 |
158645737 |
158645760 |
|
+ |
24336571 |
A375 |
resistance to PLX after 7 days |
GAACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
0.4518101164720459 |
[6,6] |
[7,9] |
9 |
hSpCas9 |
positive selection |
3116384 |
158645737 |
158645760 |
|
+ |
24336571 |
A375 |
resistance to PLX after 14 days |
GAACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
0.616138801994322 |
[4,3] |
[3,1] |
5 |
hSpCas9 |
positive selection |
3174177 |
158645737 |
158645760 |
|
+ |
24336571 |
A375 |
viability after 7 days |
GAACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
-0.17138990499195983 |
[7] |
[6,6] |
-2 |
hSpCas9 |
negative selection |
3231970 |
158645737 |
158645760 |
|
+ |
24336571 |
A375 |
viability after 14 days |
GAACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
-0.738256406437545 |
[7] |
[4,3] |
-7 |
hSpCas9 |
negative selection |
3289763 |
158645737 |
158645760 |
3 |
+ |
27383988 |
293T |
resistance to West Nile virus (flavivirus) |
GAACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
0.13811381519134064 |
[142,134] |
[0,0] |
0 |
hSpCas9 |
positive selection |
3351348 |
158645642 |
158645665 |
3 |
+ |
27383988 |
293T |
resistance to West Nile virus (flavivirus) |
CCTGCCGATGGTCTTCATCAGGG |
GFM1 |
ENSG00000168827 |
-0.446509523142357 |
[206,209] |
[0,0] |
-3 |
hSpCas9 |
positive selection |
3351349 |
158645642 |
158645665 |
3 |
+ |
26780180 |
A375 |
viability |
CCTGCCGATGGTCTTCATCAGGG |
GFM1 |
ENSG00000168827 |
1.28194458781377 |
[] |
[] |
7 |
hSpCas9 |
negative selection |
3943560 |
158645737 |
158645760 |
3 |
+ |
26780180 |
A375 |
viability |
GAACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
1.58223103906254 |
[] |
[] |
8 |
hSpCas9 |
negative selection |
3943561 |
158645642 |
158645665 |
3 |
+ |
26780180 |
HT29 |
viability (GeCKOv2 library) |
CCTGCCGATGGTCTTCATCAGGG |
GFM1 |
ENSG00000168827 |
0.185287883382305 |
[] |
[] |
0 |
hSpCas9 |
negative selection |
4051526 |
158645737 |
158645760 |
3 |
+ |
26780180 |
HT29 |
viability (GeCKOv2 library) |
GAACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
3.06388146155558 |
[] |
[] |
9 |
hSpCas9 |
negative selection |
4051527 |
158645737 |
158645760 |
3 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiCRISPRv1) |
GAACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
-0.4884645057749192 |
[3] |
[0,1] |
-8 |
hSpCas9 |
positive selection |
4139565 |
158645737 |
158645760 |
3 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiGuide) |
GAACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
-0.26383359301825493 |
[1] |
[0,0,0,0] |
-4 |
hSpCas9 |
positive selection |
4203587 |
158645737 |
158645760 |
3 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
GAACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
-0.29342914373665496 |
[3] |
[2,1] |
-6 |
hSpCas9 |
positive selection |
4272632 |
158645642 |
158645665 |
3 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
CCTGCCGATGGTCTTCATCAGGG |
GFM1 |
ENSG00000168827 |
0.5359635958372049 |
[3] |
[4,4] |
9 |
hSpCas9 |
positive selection |
4272634 |
158645738 |
158645760 |
3 |
+ |
27760321 |
OCIAML3 |
viability |
AACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
-0.8216825288921537 |
[106,94] |
[51,34] |
-6 |
hSpCas9 |
negative selection |
4403427 |
158645738 |
158645760 |
3 |
+ |
27760321 |
OCIAML2 |
viability |
AACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
-2.9643115494170544 |
[106,94] |
[6,14] |
-9 |
hSpCas9 |
negative selection |
4486890 |
158645738 |
158645760 |
3 |
+ |
27760321 |
MV411 |
viability |
AACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
-4.678458413169107 |
[106,94] |
[0,4] |
-9 |
hSpCas9 |
negative selection |
4570353 |
158645738 |
158645760 |
3 |
+ |
27760321 |
HL60 |
viability |
AACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
-6.364103847535739 |
[106,94] |
[0,0] |
-9 |
hSpCas9 |
negative selection |
4653816 |
158645738 |
158645760 |
3 |
+ |
27760321 |
HT1080 |
viability |
AACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
-5.0728887527159365 |
[94,73] |
[0,0] |
-8 |
hSpCas9 |
negative selection |
4737279 |
158645738 |
158645760 |
3 |
+ |
27760321 |
HT29 |
viability after 7 days |
AACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
-0.21949152401939065 |
[94,73] |
[91,75,110] |
-3 |
hSpCas9 |
negative selection |
4820742 |
158645738 |
158645760 |
3 |
+ |
27760321 |
HT29 |
viability after 25 days |
AACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
-6.592571017562461 |
[94,73] |
[0,0,0] |
-9 |
hSpCas9 |
negative selection |
4904205 |
158645738 |
158645760 |
3 |
+ |
27760321 |
HT29 |
viability after 22 days |
AACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
-2.8578219472585897 |
[94,73] |
[0,0,38] |
-8 |
hSpCas9 |
negative selection |
4987668 |
158645738 |
158645760 |
3 |
+ |
27760321 |
HT29 |
viability after 19 days |
AACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
-5.443111015895045 |
[94,73] |
[4,0,0] |
-9 |
hSpCas9 |
negative selection |
5071131 |
158645738 |
158645760 |
3 |
+ |
27760321 |
HT29 |
viability after 16 days |
AACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
-0.742113796475155 |
[94,73] |
[81,15,74] |
-6 |
hSpCas9 |
negative selection |
5154594 |
158645738 |
158645760 |
3 |
+ |
27760321 |
HT29 |
viability after 13 days |
AACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
-0.19855780569803505 |
[94,73] |
[110,90,55] |
-2 |
hSpCas9 |
negative selection |
5238057 |
158645738 |
158645760 |
3 |
+ |
27760321 |
HT29 |
viability after 10 days |
AACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
-0.4093737087023839 |
[94,73] |
[27,116,93] |
-5 |
hSpCas9 |
negative selection |
5321520 |
158645738 |
158645760 |
3 |
+ |
27760321 |
MOLM13 |
viability |
AACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
-1.7873637893750343 |
[106,94] |
[9,21] |
-7 |
hSpCas9 |
negative selection |
5404983 |
158644626 |
158644649 |
3 |
+ |
27661255 |
K562 |
viability |
GCGCTTGCCATGAGACTCCTGGG |
GFM1 |
ENSG00000168827 |
-0.6629076115441701 |
[288,337] |
[174,142] |
-8 |
dCas9-KRAB |
negative selection |
5481949 |
158644712 |
158644735 |
3 |
+ |
27661255 |
K562 |
viability |
GCAGGTACCGGAGCATAGAGAGG |
GFM1 |
ENSG00000168827 |
-0.7758271199881208 |
[1611,1638] |
[850,678] |
-8 |
dCas9-KRAB |
negative selection |
5481950 |
158644546 |
158644569 |
3 |
- |
27661255 |
K562 |
viability |
GGAAGCGGTCAAAGTCACGCCGG |
GFM1 |
ENSG00000168827 |
-1.295232621269618 |
[1369,1307] |
[507,374] |
-9 |
dCas9-KRAB |
negative selection |
5481951 |
158644602 |
158644625 |
3 |
- |
27661255 |
K562 |
viability |
GAGCACGCGTCAAAGTCCCGTGG |
GFM1 |
ENSG00000168827 |
-2.4970263022295454 |
[978,1004] |
[142,137] |
-9 |
dCas9-KRAB |
negative selection |
5481952 |
158672703 |
158672726 |
3 |
- |
27661255 |
K562 |
viability |
GCCCGCTGCAGGCAGTAGTGGGG |
GFM1 |
ENSG00000168827 |
0.07311274485023822 |
[414,392] |
[321,354] |
2 |
dCas9-KRAB |
negative selection |
5491401 |
158645737 |
158645760 |
3 |
+ |
27260156 |
BXPC3 |
viability |
GAACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
-0.31428270641221295 |
[627] |
[481,525,550,558] |
-6 |
hSpCas9 |
negative selection |
5545092 |
158645642 |
158645665 |
3 |
+ |
27260156 |
BXPC3 |
viability |
CCTGCCGATGGTCTTCATCAGGG |
GFM1 |
ENSG00000168827 |
-0.0843433812146468 |
[845] |
[810,748,921,861] |
-2 |
hSpCas9 |
negative selection |
5545094 |
158645737 |
158645760 |
3 |
+ |
27260156 |
A673 |
viability |
GAACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
-0.10757731546810129 |
[627] |
[555,729,747,748] |
-3 |
hSpCas9 |
negative selection |
5666343 |
158645642 |
158645665 |
3 |
+ |
27260156 |
A673 |
viability |
CCTGCCGATGGTCTTCATCAGGG |
GFM1 |
ENSG00000168827 |
0.3097735945332548 |
[845] |
[1339,1109,1212,1391] |
7 |
hSpCas9 |
negative selection |
5666345 |
158645737 |
158645760 |
3 |
+ |
27260156 |
A375 |
viability |
GAACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
-0.7106173781124573 |
[627] |
[551,522,322,408] |
-7 |
hSpCas9 |
negative selection |
5787594 |
158645642 |
158645665 |
3 |
+ |
27260156 |
A375 |
viability |
CCTGCCGATGGTCTTCATCAGGG |
GFM1 |
ENSG00000168827 |
-0.5658186628596726 |
[845] |
[662,888,678,488] |
-6 |
hSpCas9 |
negative selection |
5787596 |
158645737 |
158645760 |
3 |
+ |
27260156 |
COLO741 |
viability |
GAACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
-0.21283686251239092 |
[627] |
[742,662,674] |
-4 |
hSpCas9 |
negative selection |
5908845 |
158645642 |
158645665 |
3 |
+ |
27260156 |
COLO741 |
viability |
CCTGCCGATGGTCTTCATCAGGG |
GFM1 |
ENSG00000168827 |
0.09777075173109806 |
[845] |
[1193,1193,1087] |
2 |
hSpCas9 |
negative selection |
5908847 |
158645737 |
158645760 |
3 |
+ |
27260156 |
CAL120 |
viability |
GAACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
-0.5704158877987798 |
[627] |
[490,652,430] |
-7 |
hSpCas9 |
negative selection |
6030096 |
158645642 |
158645665 |
3 |
+ |
27260156 |
CAL120 |
viability |
CCTGCCGATGGTCTTCATCAGGG |
GFM1 |
ENSG00000168827 |
0.1961879569495134 |
[845] |
[1124,1631,854] |
3 |
hSpCas9 |
negative selection |
6030098 |
158645737 |
158645760 |
3 |
+ |
27260156 |
CADOES1 |
viability |
GAACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
-0.327384686908487 |
[627] |
[462,367,482,550] |
-5 |
hSpCas9 |
negative selection |
6151347 |
158645642 |
158645665 |
3 |
+ |
27260156 |
CADOES1 |
viability |
CCTGCCGATGGTCTTCATCAGGG |
GFM1 |
ENSG00000168827 |
-0.17247670444593388 |
[845] |
[543,687,811,750] |
-3 |
hSpCas9 |
negative selection |
6151349 |
158645737 |
158645760 |
3 |
+ |
27260156 |
EWS502 |
viability |
GAACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
-0.7085235908188569 |
[627] |
[392,585,289,345] |
-8 |
hSpCas9 |
negative selection |
6272598 |
158645642 |
158645665 |
3 |
+ |
27260156 |
EWS502 |
viability |
CCTGCCGATGGTCTTCATCAGGG |
GFM1 |
ENSG00000168827 |
0.1945363692259946 |
[845] |
[1124,748,1059,1173] |
3 |
hSpCas9 |
negative selection |
6272600 |
158645737 |
158645760 |
3 |
+ |
27260156 |
EW8 |
viability |
GAACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
-0.32821466412565503 |
[627] |
[443,650,270,282] |
-6 |
hSpCas9 |
negative selection |
6393849 |
158645642 |
158645665 |
3 |
+ |
27260156 |
EW8 |
viability |
CCTGCCGATGGTCTTCATCAGGG |
GFM1 |
ENSG00000168827 |
-0.012648804650757461 |
[845] |
[897,578,495,797] |
0 |
hSpCas9 |
negative selection |
6393851 |
158645737 |
158645760 |
3 |
+ |
27260156 |
CORL105 |
viability |
GAACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
-0.8660339064592661 |
[627] |
[328,381,460,447] |
-9 |
hSpCas9 |
negative selection |
6515100 |
158645642 |
158645665 |
3 |
+ |
27260156 |
CORL105 |
viability |
CCTGCCGATGGTCTTCATCAGGG |
GFM1 |
ENSG00000168827 |
-0.4136302743198617 |
[845] |
[875,556,700,840] |
-6 |
hSpCas9 |
negative selection |
6515102 |
158645737 |
158645760 |
3 |
+ |
27260156 |
HS294T |
viability |
GAACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
-0.4124787984912487 |
[627] |
[269,119,158,171] |
-5 |
hSpCas9 |
negative selection |
6636351 |
158645642 |
158645665 |
3 |
+ |
27260156 |
HS294T |
viability |
CCTGCCGATGGTCTTCATCAGGG |
GFM1 |
ENSG00000168827 |
0.21757867405056885 |
[845] |
[342,260,437,506] |
3 |
hSpCas9 |
negative selection |
6636353 |
158645737 |
158645760 |
3 |
+ |
27260156 |
HCC44 |
viability |
GAACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
-0.6778328996957648 |
[627] |
[590,449,330,394] |
-7 |
hSpCas9 |
negative selection |
6757602 |
158645642 |
158645665 |
3 |
+ |
27260156 |
HCC44 |
viability |
CCTGCCGATGGTCTTCATCAGGG |
GFM1 |
ENSG00000168827 |
0.23581012224659392 |
[845] |
[1339,979,1120,1096] |
4 |
hSpCas9 |
negative selection |
6757604 |
158645737 |
158645760 |
3 |
+ |
27260156 |
G402 |
viability |
GAACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
-0.7118493267972259 |
[627] |
[820,317,519,262] |
-7 |
hSpCas9 |
negative selection |
6878853 |
158645642 |
158645665 |
3 |
+ |
27260156 |
G402 |
viability |
CCTGCCGATGGTCTTCATCAGGG |
GFM1 |
ENSG00000168827 |
-0.0010573531499611377 |
[845] |
[1623,740,734,1087] |
0 |
hSpCas9 |
negative selection |
6878855 |
158645737 |
158645760 |
3 |
+ |
27260156 |
L33 |
viability |
GAACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
-0.3452676373975092 |
[627] |
[464,197,348,474] |
-7 |
hSpCas9 |
negative selection |
7000104 |
158645642 |
158645665 |
3 |
+ |
27260156 |
L33 |
viability |
CCTGCCGATGGTCTTCATCAGGG |
GFM1 |
ENSG00000168827 |
0.2601338862866768 |
[845] |
[1166,415,570,957] |
5 |
hSpCas9 |
negative selection |
7000106 |
158645737 |
158645760 |
3 |
+ |
27260156 |
K562 |
viability |
GAACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
-0.9702055866095982 |
[627] |
[530,278,188,170] |
-8 |
hSpCas9 |
negative selection |
7121355 |
158645642 |
158645665 |
3 |
+ |
27260156 |
K562 |
viability |
CCTGCCGATGGTCTTCATCAGGG |
GFM1 |
ENSG00000168827 |
0.06016079739878066 |
[845] |
[437,1284,414,965] |
0 |
hSpCas9 |
negative selection |
7121357 |
158645737 |
158645760 |
3 |
+ |
27260156 |
HT29 |
viability |
GAACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
-0.7513783902736131 |
[627] |
[385,521,401,495] |
-8 |
hSpCas9 |
negative selection |
7242606 |
158645642 |
158645665 |
3 |
+ |
27260156 |
HT29 |
viability |
CCTGCCGATGGTCTTCATCAGGG |
GFM1 |
ENSG00000168827 |
-0.13148351510565903 |
[845] |
[884,986,1130,766] |
-3 |
hSpCas9 |
negative selection |
7242608 |
158645737 |
158645760 |
3 |
+ |
27260156 |
MHHES1 |
viability |
GAACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
-0.4199263196552729 |
[627] |
[411,582,544,548] |
-7 |
hSpCas9 |
negative selection |
7363857 |
158645642 |
158645665 |
3 |
+ |
27260156 |
MHHES1 |
viability |
CCTGCCGATGGTCTTCATCAGGG |
GFM1 |
ENSG00000168827 |
0.23414589620479387 |
[845] |
[1291,1359,1135,791] |
4 |
hSpCas9 |
negative selection |
7363859 |
158645737 |
158645760 |
3 |
+ |
27260156 |
MEWO |
viability |
GAACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
-0.12348137823367294 |
[627] |
[629,632,371] |
-3 |
hSpCas9 |
negative selection |
7485108 |
158645642 |
158645665 |
3 |
+ |
27260156 |
MEWO |
viability |
CCTGCCGATGGTCTTCATCAGGG |
GFM1 |
ENSG00000168827 |
0.22558446172629665 |
[845] |
[861,891,1009] |
5 |
hSpCas9 |
negative selection |
7485110 |
158645737 |
158645760 |
3 |
+ |
27260156 |
LNCAPCLONEFGC |
viability |
GAACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
-0.36512797614955755 |
[627] |
[532,402,399,424] |
-5 |
hSpCas9 |
negative selection |
7606359 |
158645642 |
158645665 |
3 |
+ |
27260156 |
LNCAPCLONEFGC |
viability |
CCTGCCGATGGTCTTCATCAGGG |
GFM1 |
ENSG00000168827 |
-0.04653723967713541 |
[845] |
[912,632,731,691] |
0 |
hSpCas9 |
negative selection |
7606361 |
158645737 |
158645760 |
3 |
+ |
27260156 |
PANC0327 |
viability |
GAACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
-0.34315973662048266 |
[627] |
[479,438,289,552] |
-5 |
hSpCas9 |
negative selection |
7727610 |
158645642 |
158645665 |
3 |
+ |
27260156 |
PANC0327 |
viability |
CCTGCCGATGGTCTTCATCAGGG |
GFM1 |
ENSG00000168827 |
0.08389970344792252 |
[845] |
[781,720,675,1014] |
1 |
hSpCas9 |
negative selection |
7727612 |
158645737 |
158645760 |
3 |
+ |
27260156 |
NCIH2009 |
viability |
GAACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
-1.1798749190482614 |
[627] |
[423,521,219] |
-8 |
hSpCas9 |
negative selection |
7848861 |
158645642 |
158645665 |
3 |
+ |
27260156 |
NCIH2009 |
viability |
CCTGCCGATGGTCTTCATCAGGG |
GFM1 |
ENSG00000168827 |
-0.25068134741973647 |
[845] |
[1220,920,882] |
-3 |
hSpCas9 |
negative selection |
7848863 |
158645737 |
158645760 |
3 |
+ |
27260156 |
NCIH1373 |
viability |
GAACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
-0.5868819022291518 |
[627] |
[410,525,423,130] |
-5 |
hSpCas9 |
negative selection |
7970112 |
158645642 |
158645665 |
3 |
+ |
27260156 |
NCIH1373 |
viability |
CCTGCCGATGGTCTTCATCAGGG |
GFM1 |
ENSG00000168827 |
-0.1569164583513466 |
[845] |
[1113,688,514,305] |
-1 |
hSpCas9 |
negative selection |
7970114 |
158645737 |
158645760 |
3 |
+ |
27260156 |
PATU8902 |
viability |
GAACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
-0.9703057668701569 |
[627] |
[645,352,199,670] |
-7 |
hSpCas9 |
negative selection |
8091363 |
158645642 |
158645665 |
3 |
+ |
27260156 |
PATU8902 |
viability |
CCTGCCGATGGTCTTCATCAGGG |
GFM1 |
ENSG00000168827 |
-0.575670554306023 |
[845] |
[1175,676,599,740] |
-5 |
hSpCas9 |
negative selection |
8091365 |
158645737 |
158645760 |
3 |
+ |
27260156 |
PANC1 |
viability |
GAACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
-0.7996518421312875 |
[627] |
[196,331,329,371] |
-8 |
hSpCas9 |
negative selection |
8212614 |
158645642 |
158645665 |
3 |
+ |
27260156 |
PANC1 |
viability |
CCTGCCGATGGTCTTCATCAGGG |
GFM1 |
ENSG00000168827 |
-0.23329833008516632 |
[845] |
[559,729,570,623] |
-4 |
hSpCas9 |
negative selection |
8212616 |
158645737 |
158645760 |
3 |
+ |
27260156 |
PANC0813 |
viability |
GAACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
-0.6786152715486322 |
[627] |
[340,450,403,625] |
-7 |
hSpCas9 |
negative selection |
8333865 |
158645642 |
158645665 |
3 |
+ |
27260156 |
PANC0813 |
viability |
CCTGCCGATGGTCTTCATCAGGG |
GFM1 |
ENSG00000168827 |
0.07821937257670752 |
[845] |
[1294,1103,955,871] |
1 |
hSpCas9 |
negative selection |
8333867 |
158645737 |
158645760 |
3 |
+ |
27260156 |
RDES |
viability |
GAACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
-0.1215696129153962 |
[627] |
[487,576,873,767] |
-2 |
hSpCas9 |
negative selection |
8455116 |
158645642 |
158645665 |
3 |
+ |
27260156 |
RDES |
viability |
CCTGCCGATGGTCTTCATCAGGG |
GFM1 |
ENSG00000168827 |
0.17205765835088294 |
[845] |
[855,927,1289,1400] |
3 |
hSpCas9 |
negative selection |
8455118 |
158645737 |
158645760 |
3 |
+ |
27260156 |
PC3 |
viability |
GAACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
-0.014495193291119035 |
[627] |
[399,655,1112,529] |
0 |
hSpCas9 |
negative selection |
8576367 |
158645642 |
158645665 |
3 |
+ |
27260156 |
PC3 |
viability |
CCTGCCGATGGTCTTCATCAGGG |
GFM1 |
ENSG00000168827 |
0.27583747177688867 |
[845] |
[711,798,1868,1076] |
6 |
hSpCas9 |
negative selection |
8576369 |
158645737 |
158645760 |
3 |
+ |
27260156 |
PATU8988T |
viability |
GAACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
-0.8575546862985615 |
[627] |
[200,352,368,424] |
-8 |
hSpCas9 |
negative selection |
8697618 |
158645642 |
158645665 |
3 |
+ |
27260156 |
PATU8988T |
viability |
CCTGCCGATGGTCTTCATCAGGG |
GFM1 |
ENSG00000168827 |
-0.01729071851032049 |
[845] |
[708,745,861,915] |
0 |
hSpCas9 |
negative selection |
8697620 |
158645737 |
158645760 |
3 |
+ |
27260156 |
T47D |
viability |
GAACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
-0.43320953764248255 |
[627] |
[539,634,475,507] |
-7 |
hSpCas9 |
negative selection |
8818869 |
158645642 |
158645665 |
3 |
+ |
27260156 |
T47D |
viability |
CCTGCCGATGGTCTTCATCAGGG |
GFM1 |
ENSG00000168827 |
0.007188708486350448 |
[845] |
[1045,942,947,1030] |
0 |
hSpCas9 |
negative selection |
8818871 |
158645737 |
158645760 |
3 |
+ |
27260156 |
SU8686 |
viability |
GAACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
-0.602882766532708 |
[627] |
[398,515,332,366] |
-7 |
hSpCas9 |
negative selection |
8940120 |
158645642 |
158645665 |
3 |
+ |
27260156 |
SU8686 |
viability |
CCTGCCGATGGTCTTCATCAGGG |
GFM1 |
ENSG00000168827 |
0.1986952354988506 |
[845] |
[1008,869,923,1061] |
3 |
hSpCas9 |
negative selection |
8940122 |
158645737 |
158645760 |
3 |
+ |
27260156 |
SKES1 |
viability |
GAACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
-0.1884597064077759 |
[627] |
[616,615,501,483] |
-4 |
hSpCas9 |
negative selection |
9061371 |
158645642 |
158645665 |
3 |
+ |
27260156 |
SKES1 |
viability |
CCTGCCGATGGTCTTCATCAGGG |
GFM1 |
ENSG00000168827 |
0.11526708599172697 |
[845] |
[978,1044,799,855] |
2 |
hSpCas9 |
negative selection |
9061373 |
158645737 |
158645760 |
3 |
+ |
27260156 |
TOV112D |
viability |
GAACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
-0.5970383024141135 |
[627] |
[403,447,382,433] |
-8 |
hSpCas9 |
negative selection |
9182622 |
158645642 |
158645665 |
3 |
+ |
27260156 |
TOV112D |
viability |
CCTGCCGATGGTCTTCATCAGGG |
GFM1 |
ENSG00000168827 |
-0.03489116122086078 |
[845] |
[844,1040,754,722] |
0 |
hSpCas9 |
negative selection |
9182624 |
158645737 |
158645760 |
3 |
+ |
27260156 |
TC71 |
viability |
GAACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
-0.36789484018496543 |
[627] |
[553,655,400,475] |
-7 |
hSpCas9 |
negative selection |
9303873 |
158645642 |
158645665 |
3 |
+ |
27260156 |
TC71 |
viability |
CCTGCCGATGGTCTTCATCAGGG |
GFM1 |
ENSG00000168827 |
0.27117283644319035 |
[845] |
[1045,971,1012,1366] |
6 |
hSpCas9 |
negative selection |
9303875 |
158645737 |
158645760 |
3 |
+ |
27260156 |
TC32 |
viability |
GAACGAGTCCTTTACTACACTGG |
GFM1 |
ENSG00000168827 |
-0.20314990296663304 |
[627] |
[495,323,803,521] |
-4 |
hSpCas9 |
negative selection |
9425124 |
158645642 |
158645665 |
3 |
+ |
27260156 |
TC32 |
viability |
CCTGCCGATGGTCTTCATCAGGG |
GFM1 |
ENSG00000168827 |
0.09295801188521613 |
[845] |
[849,525,1063,1074] |
1 |
hSpCas9 |
negative selection |
9425126 |
158644685 |
158644708 |
3 |
- |
27869803 |
HPAFII |
viability after 27 days |
TCTGCCAGCCTAGGGAGGCGGGG |
GFM1 |
ENSG00000168827 |
-1.2753461443722798 |
[202] |
[66,24,NaN] |
-7 |
hSpCas9 |
negative selection |
9583309 |
158645630 |
158645653 |
3 |
+ |
27869803 |
HPAFII |
viability after 27 days |
TTAATTGGAAGGCCTGCCGATGG |
GFM1 |
ENSG00000168827 |
-1.5818918467611893 |
[43] |
[10,4,NaN] |
-7 |
hSpCas9 |
negative selection |
9583310 |
158644685 |
158644708 |
3 |
- |
27869803 |
HPAFII |
viability after 15 days |
TCTGCCAGCCTAGGGAGGCGGGG |
GFM1 |
ENSG00000168827 |
-0.2191072900419314 |
[202] |
[319,104,NaN] |
-3 |
hSpCas9 |
negative selection |
9665758 |
158645630 |
158645653 |
3 |
+ |
27869803 |
HPAFII |
viability after 15 days |
TTAATTGGAAGGCCTGCCGATGG |
GFM1 |
ENSG00000168827 |
-0.8581704092020312 |
[43] |
[59,4,NaN] |
-7 |
hSpCas9 |
negative selection |
9665759 |
158644685 |
158644708 |
3 |
- |
27869803 |
ASPC1 |
viability after 36 days |
TCTGCCAGCCTAGGGAGGCGGGG |
GFM1 |
ENSG00000168827 |
-1.3290826297658564 |
[450] |
[102,89,11] |
-8 |
hSpCas9 |
negative selection |
9748207 |
158645630 |
158645653 |
3 |
+ |
27869803 |
ASPC1 |
viability after 36 days |
TTAATTGGAAGGCCTGCCGATGG |
GFM1 |
ENSG00000168827 |
-0.46535542661147744 |
[148] |
[15,99,2] |
-5 |
hSpCas9 |
negative selection |
9748208 |
158644685 |
158644708 |
3 |
- |
27869803 |
PATU8988S |
viability after 35 days |
TCTGCCAGCCTAGGGAGGCGGGG |
GFM1 |
ENSG00000168827 |
-1.2189148462227197 |
[516] |
[68,109,NaN] |
-8 |
hSpCas9 |
negative selection |
9830656 |
158645630 |
158645653 |
3 |
+ |
27869803 |
PATU8988S |
viability after 35 days |
TTAATTGGAAGGCCTGCCGATGG |
GFM1 |
ENSG00000168827 |
-4.916775914422066 |
[74] |
[0,0,NaN] |
-9 |
hSpCas9 |
negative selection |
9830657 |
158644685 |
158644708 |
3 |
- |
27869803 |
PATU8988S |
viability after 31 days |
TCTGCCAGCCTAGGGAGGCGGGG |
GFM1 |
ENSG00000168827 |
-1.3321572323679582 |
[516] |
[69,96,NaN] |
-8 |
hSpCas9 |
negative selection |
9913105 |
158645630 |
158645653 |
3 |
+ |
27869803 |
PATU8988S |
viability after 31 days |
TTAATTGGAAGGCCTGCCGATGG |
GFM1 |
ENSG00000168827 |
-3.2244840720061334 |
[74] |
[0,5,NaN] |
-9 |
hSpCas9 |
negative selection |
9913106 |
158644685 |
158644708 |
3 |
- |
27869803 |
HPAFII |
viability after 35 days |
TCTGCCAGCCTAGGGAGGCGGGG |
GFM1 |
ENSG00000168827 |
-2.3233329050912372 |
[202] |
[28,10,NaN] |
-8 |
hSpCas9 |
negative selection |
9995554 |
158645630 |
158645653 |
3 |
+ |
27869803 |
HPAFII |
viability after 35 days |
TTAATTGGAAGGCCTGCCGATGG |
GFM1 |
ENSG00000168827 |
-4.477343065640623 |
[43] |
[0,0,NaN] |
-9 |
hSpCas9 |
negative selection |
9995555 |
158644685 |
158644708 |
3 |
- |
27869803 |
HPAFII |
viability after 31 days |
TCTGCCAGCCTAGGGAGGCGGGG |
GFM1 |
ENSG00000168827 |
-2.5423410031969857 |
[202] |
[31,5,NaN] |
-8 |
hSpCas9 |
negative selection |
10078003 |
158645630 |
158645653 |
3 |
+ |
27869803 |
HPAFII |
viability after 31 days |
TTAATTGGAAGGCCTGCCGATGG |
GFM1 |
ENSG00000168827 |
-1.8927060783482124 |
[43] |
[9,2,NaN] |
-8 |
hSpCas9 |
negative selection |
10078004 |
158684550 |
158684573 |
3 |
- |
28162770 |
P31FUJ |
viability |
AGAGCTTGTGACCAGAAAGAGGG |
GFM1 |
ENSG00000168827 |
-3.0596533020977796 |
[148] |
[20] |
-9 |
hSpCas9 |
negative selection |
10161700 |
158690249 |
158690272 |
3 |
+ |
28162770 |
P31FUJ |
viability |
GCAGGAATTAACCGACGCCATGG |
GFM1 |
ENSG00000168827 |
-1.487616103443204 |
[209] |
[87] |
-7 |
hSpCas9 |
negative selection |
10161701 |
158684550 |
158684573 |
3 |
- |
28162770 |
TF1 |
viability |
AGAGCTTGTGACCAGAAAGAGGG |
GFM1 |
ENSG00000168827 |
NaN |
[NaN] |
[3] |
1 |
hSpCas9 |
negative selection |
10331066 |
158690249 |
158690272 |
3 |
+ |
28162770 |
TF1 |
viability |
GCAGGAATTAACCGACGCCATGG |
GFM1 |
ENSG00000168827 |
NaN |
[NaN] |
[7] |
1 |
hSpCas9 |
negative selection |
10331067 |
158684550 |
158684573 |
3 |
- |
28162770 |
SKM1 |
viability |
AGAGCTTGTGACCAGAAAGAGGG |
GFM1 |
ENSG00000168827 |
-1.348070509689593 |
[35] |
[24] |
-7 |
hSpCas9 |
negative selection |
10500432 |
158690249 |
158690272 |
3 |
+ |
28162770 |
SKM1 |
viability |
GCAGGAATTAACCGACGCCATGG |
GFM1 |
ENSG00000168827 |
-2.391857306352953 |
[94] |
[31] |
-8 |
hSpCas9 |
negative selection |
10500433 |
158684550 |
158684573 |
3 |
- |
28162770 |
SKM1 |
viability |
AGAGCTTGTGACCAGAAAGAGGG |
GFM1 |
ENSG00000168827 |
-1.348070509689593 |
[35] |
[24] |
-7 |
hSpCas9 |
negative selection |
10669798 |
158690249 |
158690272 |
3 |
+ |
28162770 |
SKM1 |
viability |
GCAGGAATTAACCGACGCCATGG |
GFM1 |
ENSG00000168827 |
-2.391857306352953 |
[94] |
[31] |
-8 |
hSpCas9 |
negative selection |
10669799 |
158684550 |
158684573 |
3 |
- |
28162770 |
PL21 |
viability |
AGAGCTTGTGACCAGAAAGAGGG |
GFM1 |
ENSG00000168827 |
0.07376232871976468 |
[154] |
[70] |
0 |
hSpCas9 |
negative selection |
10839164 |
158690249 |
158690272 |
3 |
+ |
28162770 |
PL21 |
viability |
GCAGGAATTAACCGACGCCATGG |
GFM1 |
ENSG00000168827 |
-1.1617272257681859 |
[292] |
[56] |
-7 |
hSpCas9 |
negative selection |
10839165 |
158684550 |
158684573 |
3 |
- |
28162770 |
P31FUJ |
viability |
AGAGCTTGTGACCAGAAAGAGGG |
GFM1 |
ENSG00000168827 |
-3.0596533020977796 |
[148] |
[20] |
-9 |
hSpCas9 |
negative selection |
11008530 |
158690249 |
158690272 |
3 |
+ |
28162770 |
P31FUJ |
viability |
GCAGGAATTAACCGACGCCATGG |
GFM1 |
ENSG00000168827 |
-1.487616103443204 |
[209] |
[87] |
-7 |
hSpCas9 |
negative selection |
11008531 |
158684550 |
158684573 |
3 |
- |
28162770 |
OCIAML5 |
viability |
AGAGCTTGTGACCAGAAAGAGGG |
GFM1 |
ENSG00000168827 |
-0.7216699336083221 |
[73] |
[80] |
-5 |
hSpCas9 |
negative selection |
11177896 |
158690249 |
158690272 |
3 |
+ |
28162770 |
OCIAML5 |
viability |
GCAGGAATTAACCGACGCCATGG |
GFM1 |
ENSG00000168827 |
-3.2803035678977 |
[182] |
[33] |
-9 |
hSpCas9 |
negative selection |
11177897 |
158684550 |
158684573 |
3 |
- |
28162770 |
EOL1 |
viability |
AGAGCTTGTGACCAGAAAGAGGG |
GFM1 |
ENSG00000168827 |
-1.7404140512158415 |
[240] |
[37] |
-8 |
hSpCas9 |
negative selection |
11347262 |
158690249 |
158690272 |
3 |
+ |
28162770 |
EOL1 |
viability |
GCAGGAATTAACCGACGCCATGG |
GFM1 |
ENSG00000168827 |
-2.9605384537196358 |
[590] |
[39] |
-9 |
hSpCas9 |
negative selection |
11347263 |
158684550 |
158684573 |
3 |
- |
28162770 |
MOLM13 |
viability |
AGAGCTTGTGACCAGAAAGAGGG |
GFM1 |
ENSG00000168827 |
-0.6417351096299194 |
[163] |
[75] |
-4 |
hSpCas9 |
negative selection |
11516628 |
158690249 |
158690272 |
3 |
+ |
28162770 |
MOLM13 |
viability |
GCAGGAATTAACCGACGCCATGG |
GFM1 |
ENSG00000168827 |
-2.7486360327598724 |
[408] |
[43] |
-8 |
hSpCas9 |
negative selection |
11516629 |
158684550 |
158684573 |
3 |
- |
28162770 |
HEL |
viability |
AGAGCTTGTGACCAGAAAGAGGG |
GFM1 |
ENSG00000168827 |
-2.150810290532217 |
[207] |
[29] |
-8 |
hSpCas9 |
negative selection |
11685994 |
158690249 |
158690272 |
3 |
+ |
28162770 |
HEL |
viability |
GCAGGAATTAACCGACGCCATGG |
GFM1 |
ENSG00000168827 |
-2.0178879386528714 |
[410] |
[64] |
-8 |
hSpCas9 |
negative selection |
11685995 |
158684550 |
158684573 |
3 |
- |
28162770 |
MV411 |
viability |
AGAGCTTGTGACCAGAAAGAGGG |
GFM1 |
ENSG00000168827 |
-2.085545732613583 |
[130] |
[25] |
-8 |
hSpCas9 |
negative selection |
11855360 |
158690249 |
158690272 |
3 |
+ |
28162770 |
MV411 |
viability |
GCAGGAATTAACCGACGCCATGG |
GFM1 |
ENSG00000168827 |
-3.217230716220669 |
[275] |
[24] |
-9 |
hSpCas9 |
negative selection |
11855361 |
158684550 |
158684573 |
3 |
- |
28162770 |
MONOMAC1 |
viability |
AGAGCTTGTGACCAGAAAGAGGG |
GFM1 |
ENSG00000168827 |
0.06234978175909578 |
[65] |
[78] |
0 |
hSpCas9 |
negative selection |
12024726 |
158690249 |
158690272 |
3 |
+ |
28162770 |
MONOMAC1 |
viability |
GCAGGAATTAACCGACGCCATGG |
GFM1 |
ENSG00000168827 |
-1.2628389054552998 |
[156] |
[74] |
-7 |
hSpCas9 |
negative selection |
12024727 |
158684550 |
158684573 |
3 |
- |
28162770 |
OCIAML2 |
viability |
AGAGCTTGTGACCAGAAAGAGGG |
GFM1 |
ENSG00000168827 |
-0.9852029980719195 |
[19] |
[55] |
-6 |
hSpCas9 |
negative selection |
12194092 |
158690249 |
158690272 |
3 |
+ |
28162770 |
OCIAML2 |
viability |
GCAGGAATTAACCGACGCCATGG |
GFM1 |
ENSG00000168827 |
-2.7009274446639555 |
[60] |
[51] |
-9 |
hSpCas9 |
negative selection |
12194093 |
158684550 |
158684573 |
3 |
- |
28162770 |
OCIAML3 |
viability |
AGAGCTTGTGACCAGAAAGAGGG |
GFM1 |
ENSG00000168827 |
-2.594007640324163 |
[37] |
[18] |
-9 |
hSpCas9 |
negative selection |
12363458 |
158690249 |
158690272 |
3 |
+ |
28162770 |
OCIAML3 |
viability |
GCAGGAATTAACCGACGCCATGG |
GFM1 |
ENSG00000168827 |
-0.27666681493245265 |
[62] |
[156] |
-2 |
hSpCas9 |
negative selection |
12363459 |