| 23519153 |
23519176 |
18 |
+ |
26472758 |
Jiyoye |
viability |
CGTGCATCATCAGGATACAGAGG |
NPC1 |
ENSG00000141458 |
0.7782695331971202 |
[74] |
[96] |
5 |
hSpCas9 |
negative selection |
18439 |
23519117 |
23519140 |
18 |
+ |
26472758 |
Jiyoye |
viability |
AAAGTTTGCCCTGAACGTGGTGG |
NPC1 |
ENSG00000141458 |
1.0693057427494894 |
[90] |
[143] |
7 |
hSpCas9 |
negative selection |
18440 |
23520261 |
23520284 |
18 |
- |
26472758 |
Jiyoye |
viability |
ATCGAGCGGGAAGCACGGGGTGG |
NPC1 |
ENSG00000141458 |
0.228838140247361 |
[85] |
[75] |
1 |
hSpCas9 |
negative selection |
18441 |
23524461 |
23524484 |
18 |
+ |
26472758 |
Jiyoye |
viability |
ATCATTATCAGCGCAAGCCAAGG |
NPC1 |
ENSG00000141458 |
0.6227141318012588 |
[210] |
[244] |
4 |
hSpCas9 |
negative selection |
18442 |
23507033 |
23507056 |
18 |
+ |
26472758 |
Jiyoye |
viability |
TCAGAGGACCTCAAAGACTGTGG |
NPC1 |
ENSG00000141458 |
1.0860557456146687 |
[222] |
[356] |
7 |
hSpCas9 |
negative selection |
18443 |
23518932 |
23518955 |
18 |
+ |
26472758 |
Jiyoye |
viability |
GACCTCCAACAGCACAGGAGCGG |
NPC1 |
ENSG00000141458 |
-0.53837683447175 |
[207] |
[107] |
-4 |
hSpCas9 |
negative selection |
18444 |
23530111 |
23530134 |
18 |
- |
26472758 |
Jiyoye |
viability |
CCAAAGGTTTGGAGTCGCTGAGG |
NPC1 |
ENSG00000141458 |
1.2389038989160748 |
[108] |
[193] |
7 |
hSpCas9 |
negative selection |
18445 |
23530571 |
23530594 |
18 |
+ |
26472758 |
Jiyoye |
viability |
AGCGAAACCAGCGTTTGCGAGGG |
NPC1 |
ENSG00000141458 |
3.214530303563477 |
[0] |
[6] |
9 |
hSpCas9 |
negative selection |
18446 |
23539874 |
23539897 |
18 |
- |
26472758 |
Jiyoye |
viability |
GGGCAGAACATGGTGTGCGGCGG |
NPC1 |
ENSG00000141458 |
0.32290646460826933 |
[140] |
[132] |
2 |
hSpCas9 |
negative selection |
110526 |
23538563 |
23538586 |
18 |
+ |
26472758 |
Jiyoye |
viability |
GGGTTATCCGAAAGGAACATGGG |
NPC1 |
ENSG00000141458 |
-1.8280410801881581 |
[112] |
[23] |
-8 |
hSpCas9 |
negative selection |
110527 |
23586301 |
23586324 |
18 |
+ |
26472758 |
Jiyoye |
viability |
GTAGCAGCAGGAGGAGGCCAAGG |
NPC1 |
ENSG00000141458 |
-0.7532892906873727 |
[37] |
[16] |
-5 |
hSpCas9 |
negative selection |
110528 |
23560460 |
23560483 |
18 |
- |
26472758 |
Jiyoye |
viability |
AGATTTTCCAGTCCATGGGATGG |
NPC1 |
ENSG00000141458 |
-0.1378207118976379 |
[266] |
[182] |
-1 |
hSpCas9 |
negative selection |
110529 |
23556277 |
23556300 |
18 |
+ |
26472758 |
Jiyoye |
viability |
AAGGGTACATCAGCTCCCGAAGG |
NPC1 |
ENSG00000141458 |
0.39206848911566494 |
[95] |
[94] |
3 |
hSpCas9 |
negative selection |
110530 |
23556250 |
23556273 |
18 |
+ |
26472758 |
Jiyoye |
viability |
AGTATCTGTATGTCAAGCGGAGG |
NPC1 |
ENSG00000141458 |
0.17522865345617666 |
[201] |
[171] |
1 |
hSpCas9 |
negative selection |
110531 |
23548068 |
23548091 |
18 |
+ |
26472758 |
Jiyoye |
viability |
GAAGGTAATCACAAGGGCAGTGG |
NPC1 |
ENSG00000141458 |
-0.34771212065759516 |
[107] |
[63] |
-2 |
hSpCas9 |
negative selection |
110532 |
23548026 |
23548049 |
18 |
- |
26472758 |
Jiyoye |
viability |
ATGATACAGAGAAGCTCCAGAGG |
NPC1 |
ENSG00000141458 |
-0.9844031449489814 |
[243] |
[92] |
-6 |
hSpCas9 |
negative selection |
110533 |
23544440 |
23544463 |
18 |
+ |
26472758 |
Jiyoye |
viability |
AATGTAGCTGAAGACACCCAAGG |
NPC1 |
ENSG00000141458 |
0.8657145194213038 |
[146] |
[201] |
6 |
hSpCas9 |
negative selection |
110534 |
23538607 |
23538630 |
18 |
- |
26472758 |
Jiyoye |
viability |
AAGGCAAACAGAGGCCTCAGGGG |
NPC1 |
ENSG00000141458 |
-0.14383978729194513 |
[188] |
[128] |
-1 |
hSpCas9 |
negative selection |
110535 |
23519153 |
23519176 |
18 |
+ |
26472758 |
KBM7 |
viability |
CGTGCATCATCAGGATACAGAGG |
NPC1 |
ENSG00000141458 |
1.031643177518602 |
[402,552] |
[495,444] |
9 |
hSpCas9 |
negative selection |
209557 |
23519117 |
23519140 |
18 |
+ |
26472758 |
KBM7 |
viability |
AAAGTTTGCCCTGAACGTGGTGG |
NPC1 |
ENSG00000141458 |
0.40413602358568734 |
[782,635] |
[515,369] |
4 |
hSpCas9 |
negative selection |
209558 |
23520261 |
23520284 |
18 |
- |
26472758 |
KBM7 |
viability |
ATCGAGCGGGAAGCACGGGGTGG |
NPC1 |
ENSG00000141458 |
1.3341350202461186 |
[287,148] |
[348,164] |
9 |
hSpCas9 |
negative selection |
209559 |
23524461 |
23524484 |
18 |
+ |
26472758 |
KBM7 |
viability |
ATCATTATCAGCGCAAGCCAAGG |
NPC1 |
ENSG00000141458 |
0.6395715707798517 |
[866,885] |
[808,499] |
7 |
hSpCas9 |
negative selection |
209560 |
23507033 |
23507056 |
18 |
+ |
26472758 |
KBM7 |
viability |
TCAGAGGACCTCAAAGACTGTGG |
NPC1 |
ENSG00000141458 |
0.6572498152470965 |
[924,905] |
[927,460] |
7 |
hSpCas9 |
negative selection |
209561 |
23518932 |
23518955 |
18 |
+ |
26472758 |
KBM7 |
viability |
GACCTCCAACAGCACAGGAGCGG |
NPC1 |
ENSG00000141458 |
0.9192601278803574 |
[540,542] |
[599,380] |
8 |
hSpCas9 |
negative selection |
209562 |
23530111 |
23530134 |
18 |
- |
26472758 |
KBM7 |
viability |
CCAAAGGTTTGGAGTCGCTGAGG |
NPC1 |
ENSG00000141458 |
1.4649484887882476 |
[617,359] |
[777,479] |
9 |
hSpCas9 |
negative selection |
209563 |
23530571 |
23530594 |
18 |
+ |
26472758 |
KBM7 |
viability |
AGCGAAACCAGCGTTTGCGAGGG |
NPC1 |
ENSG00000141458 |
1.865933081491438 |
[45,4] |
[71,11] |
9 |
hSpCas9 |
negative selection |
209564 |
23539874 |
23539897 |
18 |
- |
26472758 |
KBM7 |
viability |
GGGCAGAACATGGTGTGCGGCGG |
NPC1 |
ENSG00000141458 |
-0.34160588017019944 |
[795,639] |
[259,268] |
-3 |
hSpCas9 |
negative selection |
301644 |
23538563 |
23538586 |
18 |
+ |
26472758 |
KBM7 |
viability |
GGGTTATCCGAAAGGAACATGGG |
NPC1 |
ENSG00000141458 |
-0.49626041947672306 |
[235,187] |
[75,64] |
-4 |
hSpCas9 |
negative selection |
301645 |
23586301 |
23586324 |
18 |
+ |
26472758 |
KBM7 |
viability |
GTAGCAGCAGGAGGAGGCCAAGG |
NPC1 |
ENSG00000141458 |
-1.1857065993767775 |
[203,189] |
[63,19] |
-7 |
hSpCas9 |
negative selection |
301646 |
23560460 |
23560483 |
18 |
- |
26472758 |
KBM7 |
viability |
AGATTTTCCAGTCCATGGGATGG |
NPC1 |
ENSG00000141458 |
0.06939657496474216 |
[1170,682] |
[517,383] |
0 |
hSpCas9 |
negative selection |
301647 |
23556277 |
23556300 |
18 |
+ |
26472758 |
KBM7 |
viability |
AAGGGTACATCAGCTCCCGAAGG |
NPC1 |
ENSG00000141458 |
-0.27329112442432596 |
[613,303] |
[186,160] |
-3 |
hSpCas9 |
negative selection |
301648 |
23556250 |
23556273 |
18 |
+ |
26472758 |
KBM7 |
viability |
AGTATCTGTATGTCAAGCGGAGG |
NPC1 |
ENSG00000141458 |
0.23489289000070668 |
[814,632] |
[351,437] |
2 |
hSpCas9 |
negative selection |
301649 |
23548068 |
23548091 |
18 |
+ |
26472758 |
KBM7 |
viability |
GAAGGTAATCACAAGGGCAGTGG |
NPC1 |
ENSG00000141458 |
0.6762271203573382 |
[256,286] |
[177,231] |
7 |
hSpCas9 |
negative selection |
301650 |
23548026 |
23548049 |
18 |
- |
26472758 |
KBM7 |
viability |
ATGATACAGAGAAGCTCCAGAGG |
NPC1 |
ENSG00000141458 |
0.221064857149887 |
[710,577] |
[318,379] |
2 |
hSpCas9 |
negative selection |
301651 |
23544440 |
23544463 |
18 |
+ |
26472758 |
KBM7 |
viability |
AATGTAGCTGAAGACACCCAAGG |
NPC1 |
ENSG00000141458 |
0.34479953840899447 |
[820,642] |
[333,522] |
3 |
hSpCas9 |
negative selection |
301652 |
23538607 |
23538630 |
18 |
- |
26472758 |
KBM7 |
viability |
AAGGCAAACAGAGGCCTCAGGGG |
NPC1 |
ENSG00000141458 |
-0.16913260439265793 |
[652,409] |
[205,228] |
-2 |
hSpCas9 |
negative selection |
301653 |
23519153 |
23519176 |
18 |
+ |
26472758 |
Raji |
viability |
CGTGCATCATCAGGATACAGAGG |
NPC1 |
ENSG00000141458 |
0.7594602319532927 |
[223] |
[87] |
7 |
hSpCas9 |
negative selection |
400675 |
23519117 |
23519140 |
18 |
+ |
26472758 |
Raji |
viability |
AAAGTTTGCCCTGAACGTGGTGG |
NPC1 |
ENSG00000141458 |
1.0790017340037772 |
[307] |
[150] |
8 |
hSpCas9 |
negative selection |
400676 |
23520261 |
23520284 |
18 |
- |
26472758 |
Raji |
viability |
ATCGAGCGGGAAGCACGGGGTGG |
NPC1 |
ENSG00000141458 |
0.9191798002129783 |
[138] |
[60] |
8 |
hSpCas9 |
negative selection |
400677 |
23524461 |
23524484 |
18 |
+ |
26472758 |
Raji |
viability |
ATCATTATCAGCGCAAGCCAAGG |
NPC1 |
ENSG00000141458 |
0.6849740474384033 |
[326] |
[121] |
6 |
hSpCas9 |
negative selection |
400678 |
23507033 |
23507056 |
18 |
+ |
26472758 |
Raji |
viability |
TCAGAGGACCTCAAAGACTGTGG |
NPC1 |
ENSG00000141458 |
0.8542288602664643 |
[552] |
[231] |
7 |
hSpCas9 |
negative selection |
400679 |
23518932 |
23518955 |
18 |
+ |
26472758 |
Raji |
viability |
GACCTCCAACAGCACAGGAGCGG |
NPC1 |
ENSG00000141458 |
1.1186988486014335 |
[253] |
[127] |
8 |
hSpCas9 |
negative selection |
400680 |
23530111 |
23530134 |
18 |
- |
26472758 |
Raji |
viability |
CCAAAGGTTTGGAGTCGCTGAGG |
NPC1 |
ENSG00000141458 |
0.9773940652809711 |
[382] |
[174] |
8 |
hSpCas9 |
negative selection |
400681 |
23530571 |
23530594 |
18 |
+ |
26472758 |
Raji |
viability |
AGCGAAACCAGCGTTTGCGAGGG |
NPC1 |
ENSG00000141458 |
-0.6999713866840049 |
[20] |
[2] |
-5 |
hSpCas9 |
negative selection |
400682 |
23539874 |
23539897 |
18 |
- |
26472758 |
Raji |
viability |
GGGCAGAACATGGTGTGCGGCGG |
NPC1 |
ENSG00000141458 |
-0.29032714617537936 |
[468] |
[88] |
-2 |
hSpCas9 |
negative selection |
492762 |
23538563 |
23538586 |
18 |
+ |
26472758 |
Raji |
viability |
GGGTTATCCGAAAGGAACATGGG |
NPC1 |
ENSG00000141458 |
-0.7505974597539726 |
[86] |
[11] |
-5 |
hSpCas9 |
negative selection |
492763 |
23586301 |
23586324 |
18 |
+ |
26472758 |
Raji |
viability |
GTAGCAGCAGGAGGAGGCCAAGG |
NPC1 |
ENSG00000141458 |
1.0004683314570875 |
[55] |
[25] |
8 |
hSpCas9 |
negative selection |
492764 |
23560460 |
23560483 |
18 |
- |
26472758 |
Raji |
viability |
AGATTTTCCAGTCCATGGGATGG |
NPC1 |
ENSG00000141458 |
0.37041794120739346 |
[459] |
[137] |
3 |
hSpCas9 |
negative selection |
492765 |
23556277 |
23556300 |
18 |
+ |
26472758 |
Raji |
viability |
AAGGGTACATCAGCTCCCGAAGG |
NPC1 |
ENSG00000141458 |
-0.25689085022335767 |
[241] |
[46] |
-2 |
hSpCas9 |
negative selection |
492766 |
23556250 |
23556273 |
18 |
+ |
26472758 |
Raji |
viability |
AGTATCTGTATGTCAAGCGGAGG |
NPC1 |
ENSG00000141458 |
0.7923970499050841 |
[310] |
[124] |
7 |
hSpCas9 |
negative selection |
492767 |
23548068 |
23548091 |
18 |
+ |
26472758 |
Raji |
viability |
GAAGGTAATCACAAGGGCAGTGG |
NPC1 |
ENSG00000141458 |
-1.4472053163040377 |
[140] |
[11] |
-7 |
hSpCas9 |
negative selection |
492768 |
23548026 |
23548049 |
18 |
- |
26472758 |
Raji |
viability |
ATGATACAGAGAAGCTCCAGAGG |
NPC1 |
ENSG00000141458 |
-0.20136917076602956 |
[435] |
[87] |
-2 |
hSpCas9 |
negative selection |
492769 |
23544440 |
23544463 |
18 |
+ |
26472758 |
Raji |
viability |
AATGTAGCTGAAGACACCCAAGG |
NPC1 |
ENSG00000141458 |
-0.2645852420133585 |
[351] |
[67] |
-2 |
hSpCas9 |
negative selection |
492770 |
23538607 |
23538630 |
18 |
- |
26472758 |
Raji |
viability |
AAGGCAAACAGAGGCCTCAGGGG |
NPC1 |
ENSG00000141458 |
0.5676502886454411 |
[313] |
[107] |
5 |
hSpCas9 |
negative selection |
492771 |
23519153 |
23519176 |
18 |
+ |
26472758 |
K562 |
viability |
CGTGCATCATCAGGATACAGAGG |
NPC1 |
ENSG00000141458 |
1.2339567888478222 |
[345] |
[686] |
9 |
hSpCas9 |
negative selection |
591793 |
23519117 |
23519140 |
18 |
+ |
26472758 |
K562 |
viability |
AAAGTTTGCCCTGAACGTGGTGG |
NPC1 |
ENSG00000141458 |
0.7617636497462588 |
[363] |
[520] |
6 |
hSpCas9 |
negative selection |
591794 |
23520261 |
23520284 |
18 |
- |
26472758 |
K562 |
viability |
ATCGAGCGGGAAGCACGGGGTGG |
NPC1 |
ENSG00000141458 |
0.6557711801374347 |
[293] |
[390] |
5 |
hSpCas9 |
negative selection |
591795 |
23524461 |
23524484 |
18 |
+ |
26472758 |
K562 |
viability |
ATCATTATCAGCGCAAGCCAAGG |
NPC1 |
ENSG00000141458 |
0.5041780014673796 |
[587] |
[703] |
4 |
hSpCas9 |
negative selection |
591796 |
23507033 |
23507056 |
18 |
+ |
26472758 |
K562 |
viability |
TCAGAGGACCTCAAAGACTGTGG |
NPC1 |
ENSG00000141458 |
1.1248633429711645 |
[678] |
[1249] |
8 |
hSpCas9 |
negative selection |
591797 |
23518932 |
23518955 |
18 |
+ |
26472758 |
K562 |
viability |
GACCTCCAACAGCACAGGAGCGG |
NPC1 |
ENSG00000141458 |
0.7135814408062586 |
[496] |
[687] |
6 |
hSpCas9 |
negative selection |
591798 |
23530111 |
23530134 |
18 |
- |
26472758 |
K562 |
viability |
CCAAAGGTTTGGAGTCGCTGAGG |
NPC1 |
ENSG00000141458 |
0.8682702417811978 |
[304] |
[469] |
7 |
hSpCas9 |
negative selection |
591799 |
23530571 |
23530594 |
18 |
+ |
26472758 |
K562 |
viability |
AGCGAAACCAGCGTTTGCGAGGG |
NPC1 |
ENSG00000141458 |
-3.3405437730547094 |
[23] |
[1] |
-8 |
hSpCas9 |
negative selection |
591800 |
23539874 |
23539897 |
18 |
- |
26472758 |
K562 |
viability |
GGGCAGAACATGGTGTGCGGCGG |
NPC1 |
ENSG00000141458 |
-0.571956199715278 |
[721] |
[409] |
-4 |
hSpCas9 |
negative selection |
683880 |
23538563 |
23538586 |
18 |
+ |
26472758 |
K562 |
viability |
GGGTTATCCGAAAGGAACATGGG |
NPC1 |
ENSG00000141458 |
-0.9562786225706823 |
[153] |
[66] |
-5 |
hSpCas9 |
negative selection |
683881 |
23586301 |
23586324 |
18 |
+ |
26472758 |
K562 |
viability |
GTAGCAGCAGGAGGAGGCCAAGG |
NPC1 |
ENSG00000141458 |
-3.834532613728375 |
[168] |
[9] |
-9 |
hSpCas9 |
negative selection |
683882 |
23560460 |
23560483 |
18 |
- |
26472758 |
K562 |
viability |
AGATTTTCCAGTCCATGGGATGG |
NPC1 |
ENSG00000141458 |
0.6002771665049962 |
[789] |
[1010] |
5 |
hSpCas9 |
negative selection |
683883 |
23556277 |
23556300 |
18 |
+ |
26472758 |
K562 |
viability |
AAGGGTACATCAGCTCCCGAAGG |
NPC1 |
ENSG00000141458 |
0.6579588785587884 |
[240] |
[320] |
5 |
hSpCas9 |
negative selection |
683884 |
23556250 |
23556273 |
18 |
+ |
26472758 |
K562 |
viability |
AGTATCTGTATGTCAAGCGGAGG |
NPC1 |
ENSG00000141458 |
-0.4503503028455517 |
[729] |
[450] |
-3 |
hSpCas9 |
negative selection |
683885 |
23548068 |
23548091 |
18 |
+ |
26472758 |
K562 |
viability |
GAAGGTAATCACAAGGGCAGTGG |
NPC1 |
ENSG00000141458 |
-0.24461935305617377 |
[159] |
[113] |
-2 |
hSpCas9 |
negative selection |
683886 |
23548026 |
23548049 |
18 |
- |
26472758 |
K562 |
viability |
ATGATACAGAGAAGCTCCAGAGG |
NPC1 |
ENSG00000141458 |
0.6406195849324351 |
[635] |
[836] |
5 |
hSpCas9 |
negative selection |
683887 |
23544440 |
23544463 |
18 |
+ |
26472758 |
K562 |
viability |
AATGTAGCTGAAGACACCCAAGG |
NPC1 |
ENSG00000141458 |
0.3005238295515972 |
[579] |
[602] |
2 |
hSpCas9 |
negative selection |
683888 |
23538607 |
23538630 |
18 |
- |
26472758 |
K562 |
viability |
AAGGCAAACAGAGGCCTCAGGGG |
NPC1 |
ENSG00000141458 |
0.6135257237214933 |
[366] |
[473] |
5 |
hSpCas9 |
negative selection |
683889 |
23551665 |
23551688 |
18 |
+ |
26627737 |
DLD1 |
viability |
CCACCAAACGTACCCAGACAAGG |
NPC1 |
ENSG00000141458 |
0.5117490095759392 |
[1416] |
[473,598,794] |
5 |
hSpCas9 |
negative selection |
801201 |
23554880 |
23554903 |
18 |
+ |
26627737 |
DLD1 |
viability |
CGTGTTATACGGTGAAAGAGGGG |
NPC1 |
ENSG00000141458 |
1.0098938847980947 |
[791] |
[457,595,452] |
8 |
hSpCas9 |
negative selection |
801202 |
23556277 |
23556300 |
18 |
+ |
26627737 |
DLD1 |
viability |
AAGGGTACATCAGCTCCCGAAGG |
NPC1 |
ENSG00000141458 |
0.6050836313665318 |
[108] |
[13,89,52] |
6 |
hSpCas9 |
negative selection |
801203 |
23560324 |
23560347 |
18 |
+ |
26627737 |
DLD1 |
viability |
AGGATCGTCCAGGGAGCAGGAGG |
NPC1 |
ENSG00000141458 |
-0.4528870296175542 |
[219] |
[23,77,49] |
-4 |
hSpCas9 |
negative selection |
801204 |
23561454 |
23561477 |
18 |
+ |
26627737 |
DLD1 |
viability |
CTTCCCACACAGGAGTCCCAGGG |
NPC1 |
ENSG00000141458 |
-0.005214380883331982 |
[355] |
[101,177,62] |
0 |
hSpCas9 |
negative selection |
801205 |
23586289 |
23586312 |
18 |
+ |
26627737 |
DLD1 |
viability |
GCGCTGGACACAGTAGCAGCAGG |
NPC1 |
ENSG00000141458 |
1.6776585309281176 |
[0] |
[0,0,0] |
9 |
hSpCas9 |
negative selection |
801206 |
23551665 |
23551688 |
18 |
+ |
26627737 |
GBM cells |
viability after 5 days |
CCACCAAACGTACCCAGACAAGG |
NPC1 |
ENSG00000141458 |
0.5028028789484793 |
[832] |
[713,551] |
7 |
hSpCas9 |
negative selection |
883516 |
23554880 |
23554903 |
18 |
+ |
26627737 |
GBM cells |
viability after 5 days |
CGTGTTATACGGTGAAAGAGGGG |
NPC1 |
ENSG00000141458 |
0.11994075419790384 |
[452] |
[251,275] |
2 |
hSpCas9 |
negative selection |
883517 |
23556277 |
23556300 |
18 |
+ |
26627737 |
GBM cells |
viability after 5 days |
AAGGGTACATCAGCTCCCGAAGG |
NPC1 |
ENSG00000141458 |
0.16194828071947942 |
[79] |
[46,48] |
2 |
hSpCas9 |
negative selection |
883518 |
23560324 |
23560347 |
18 |
+ |
26627737 |
GBM cells |
viability after 5 days |
AGGATCGTCCAGGGAGCAGGAGG |
NPC1 |
ENSG00000141458 |
0.28509651149234405 |
[100] |
[58,72] |
4 |
hSpCas9 |
negative selection |
883519 |
23561454 |
23561477 |
18 |
+ |
26627737 |
GBM cells |
viability after 5 days |
CTTCCCACACAGGAGTCCCAGGG |
NPC1 |
ENSG00000141458 |
-0.9941709211978027 |
[207] |
[58,52] |
-9 |
hSpCas9 |
negative selection |
883520 |
23586289 |
23586312 |
18 |
+ |
26627737 |
GBM cells |
viability after 5 days |
GCGCTGGACACAGTAGCAGCAGG |
NPC1 |
ENSG00000141458 |
0.8989138748856851 |
[0] |
[0,0] |
9 |
hSpCas9 |
negative selection |
883521 |
23551665 |
23551688 |
18 |
+ |
26627737 |
GBM cells |
viability after 13 days |
CCACCAAACGTACCCAGACAAGG |
NPC1 |
ENSG00000141458 |
0.17611312382697308 |
[832] |
[567,463] |
2 |
hSpCas9 |
negative selection |
965831 |
23554880 |
23554903 |
18 |
+ |
26627737 |
GBM cells |
viability after 13 days |
CGTGTTATACGGTGAAAGAGGGG |
NPC1 |
ENSG00000141458 |
0.15424926051859944 |
[452] |
[358,203] |
2 |
hSpCas9 |
negative selection |
965832 |
23556277 |
23556300 |
18 |
+ |
26627737 |
GBM cells |
viability after 13 days |
AAGGGTACATCAGCTCCCGAAGG |
NPC1 |
ENSG00000141458 |
-0.08434431671052578 |
[79] |
[62,22] |
-1 |
hSpCas9 |
negative selection |
965833 |
23560324 |
23560347 |
18 |
+ |
26627737 |
GBM cells |
viability after 13 days |
AGGATCGTCCAGGGAGCAGGAGG |
NPC1 |
ENSG00000141458 |
0.44931175486066854 |
[100] |
[65,81] |
5 |
hSpCas9 |
negative selection |
965834 |
23561454 |
23561477 |
18 |
+ |
26627737 |
GBM cells |
viability after 13 days |
CTTCCCACACAGGAGTCCCAGGG |
NPC1 |
ENSG00000141458 |
-0.45060066629788537 |
[207] |
[145,30] |
-5 |
hSpCas9 |
negative selection |
965835 |
23586289 |
23586312 |
18 |
+ |
26627737 |
GBM cells |
viability after 13 days |
GCGCTGGACACAGTAGCAGCAGG |
NPC1 |
ENSG00000141458 |
0.8821031235784469 |
[0] |
[0,0] |
9 |
hSpCas9 |
negative selection |
965836 |
23551665 |
23551688 |
18 |
+ |
26627737 |
GBM cells |
viability after 21 days |
CCACCAAACGTACCCAGACAAGG |
NPC1 |
ENSG00000141458 |
-0.1317861689799349 |
[832] |
[411,413] |
-1 |
hSpCas9 |
negative selection |
1048146 |
23554880 |
23554903 |
18 |
+ |
26627737 |
GBM cells |
viability after 21 days |
CGTGTTATACGGTGAAAGAGGGG |
NPC1 |
ENSG00000141458 |
0.14774300794049577 |
[452] |
[280,264] |
1 |
hSpCas9 |
negative selection |
1048147 |
23556277 |
23556300 |
18 |
+ |
26627737 |
GBM cells |
viability after 21 days |
AAGGGTACATCAGCTCCCGAAGG |
NPC1 |
ENSG00000141458 |
0.6111751061540946 |
[79] |
[68,63] |
6 |
hSpCas9 |
negative selection |
1048148 |
23560324 |
23560347 |
18 |
+ |
26627737 |
GBM cells |
viability after 21 days |
AGGATCGTCCAGGGAGCAGGAGG |
NPC1 |
ENSG00000141458 |
-0.37956700244470176 |
[100] |
[37,45] |
-3 |
hSpCas9 |
negative selection |
1048149 |
23561454 |
23561477 |
18 |
+ |
26627737 |
GBM cells |
viability after 21 days |
CTTCCCACACAGGAGTCCCAGGG |
NPC1 |
ENSG00000141458 |
-0.05954190709282031 |
[207] |
[109,106] |
0 |
hSpCas9 |
negative selection |
1048150 |
23586289 |
23586312 |
18 |
+ |
26627737 |
GBM cells |
viability after 21 days |
GCGCTGGACACAGTAGCAGCAGG |
NPC1 |
ENSG00000141458 |
0.8802332996156581 |
[0] |
[0,0] |
8 |
hSpCas9 |
negative selection |
1048151 |
23551665 |
23551688 |
18 |
+ |
26627737 |
RPE1 |
viability after 9 days |
CCACCAAACGTACCCAGACAAGG |
NPC1 |
ENSG00000141458 |
0.5736576659855328 |
[3221] |
[1285,1778] |
4 |
hSpCas9 |
negative selection |
1130461 |
23554880 |
23554903 |
18 |
+ |
26627737 |
RPE1 |
viability after 9 days |
CGTGTTATACGGTGAAAGAGGGG |
NPC1 |
ENSG00000141458 |
0.15847542460829334 |
[1740] |
[434,831] |
1 |
hSpCas9 |
negative selection |
1130462 |
23556277 |
23556300 |
18 |
+ |
26627737 |
RPE1 |
viability after 9 days |
AAGGGTACATCAGCTCCCGAAGG |
NPC1 |
ENSG00000141458 |
-4.028182718558197 |
[286] |
[8,0] |
-9 |
hSpCas9 |
negative selection |
1130463 |
23560324 |
23560347 |
18 |
+ |
26627737 |
RPE1 |
viability after 9 days |
AGGATCGTCCAGGGAGCAGGAGG |
NPC1 |
ENSG00000141458 |
-0.7901316094522238 |
[486] |
[109,59] |
-5 |
hSpCas9 |
negative selection |
1130464 |
23561454 |
23561477 |
18 |
+ |
26627737 |
RPE1 |
viability after 9 days |
CTTCCCACACAGGAGTCCCAGGG |
NPC1 |
ENSG00000141458 |
-0.37055021487358575 |
[600] |
[162,122] |
-3 |
hSpCas9 |
negative selection |
1130465 |
23586289 |
23586312 |
18 |
+ |
26627737 |
RPE1 |
viability after 9 days |
GCGCTGGACACAGTAGCAGCAGG |
NPC1 |
ENSG00000141458 |
1.6754465303148196 |
[0] |
[0,0] |
8 |
hSpCas9 |
negative selection |
1130466 |
23551665 |
23551688 |
18 |
+ |
26627737 |
RPE1 |
viability after 12 days |
CCACCAAACGTACCCAGACAAGG |
NPC1 |
ENSG00000141458 |
1.1136378555611715 |
[3221] |
[1844,1902] |
6 |
hSpCas9 |
negative selection |
1212776 |
23554880 |
23554903 |
18 |
+ |
26627737 |
RPE1 |
viability after 12 days |
CGTGTTATACGGTGAAAGAGGGG |
NPC1 |
ENSG00000141458 |
0.5944023022470042 |
[1740] |
[577,841] |
4 |
hSpCas9 |
negative selection |
1212777 |
23556277 |
23556300 |
18 |
+ |
26627737 |
RPE1 |
viability after 12 days |
AAGGGTACATCAGCTCCCGAAGG |
NPC1 |
ENSG00000141458 |
-2.2107264587470197 |
[286] |
[4,28] |
-8 |
hSpCas9 |
negative selection |
1212778 |
23560324 |
23560347 |
18 |
+ |
26627737 |
RPE1 |
viability after 12 days |
AGGATCGTCCAGGGAGCAGGAGG |
NPC1 |
ENSG00000141458 |
-0.9472377692484985 |
[486] |
[96,36] |
-6 |
hSpCas9 |
negative selection |
1212779 |
23561454 |
23561477 |
18 |
+ |
26627737 |
RPE1 |
viability after 12 days |
CTTCCCACACAGGAGTCCCAGGG |
NPC1 |
ENSG00000141458 |
-0.17610344380204412 |
[600] |
[173,109] |
-1 |
hSpCas9 |
negative selection |
1212780 |
23586289 |
23586312 |
18 |
+ |
26627737 |
RPE1 |
viability after 12 days |
GCGCTGGACACAGTAGCAGCAGG |
NPC1 |
ENSG00000141458 |
1.8961114116731377 |
[0] |
[0,0] |
8 |
hSpCas9 |
negative selection |
1212781 |
23551665 |
23551688 |
18 |
+ |
26627737 |
RPE1 |
viability after 15 days |
CCACCAAACGTACCCAGACAAGG |
NPC1 |
ENSG00000141458 |
0.9156505114971893 |
[3221] |
[1699,1737] |
5 |
hSpCas9 |
negative selection |
1295091 |
23554880 |
23554903 |
18 |
+ |
26627737 |
RPE1 |
viability after 15 days |
CGTGTTATACGGTGAAAGAGGGG |
NPC1 |
ENSG00000141458 |
0.6066123751318668 |
[1740] |
[698,798] |
4 |
hSpCas9 |
negative selection |
1295092 |
23556277 |
23556300 |
18 |
+ |
26627737 |
RPE1 |
viability after 15 days |
AAGGGTACATCAGCTCCCGAAGG |
NPC1 |
ENSG00000141458 |
-5.749517661010639 |
[286] |
[0,1] |
-9 |
hSpCas9 |
negative selection |
1295093 |
23560324 |
23560347 |
18 |
+ |
26627737 |
RPE1 |
viability after 15 days |
AGGATCGTCCAGGGAGCAGGAGG |
NPC1 |
ENSG00000141458 |
-0.42476682267664445 |
[486] |
[207,0] |
-3 |
hSpCas9 |
negative selection |
1295094 |
23561454 |
23561477 |
18 |
+ |
26627737 |
RPE1 |
viability after 15 days |
CTTCCCACACAGGAGTCCCAGGG |
NPC1 |
ENSG00000141458 |
0.28634645776005013 |
[600] |
[300,116] |
1 |
hSpCas9 |
negative selection |
1295095 |
23586289 |
23586312 |
18 |
+ |
26627737 |
RPE1 |
viability after 15 days |
GCGCTGGACACAGTAGCAGCAGG |
NPC1 |
ENSG00000141458 |
1.8217488738718943 |
[0] |
[0,0] |
8 |
hSpCas9 |
negative selection |
1295096 |
23551665 |
23551688 |
18 |
+ |
26627737 |
RPE1 |
viability after 18 days |
CCACCAAACGTACCCAGACAAGG |
NPC1 |
ENSG00000141458 |
1.306410922450345 |
[3221] |
[2005,2304] |
7 |
hSpCas9 |
negative selection |
1377406 |
23554880 |
23554903 |
18 |
+ |
26627737 |
RPE1 |
viability after 18 days |
CGTGTTATACGGTGAAAGAGGGG |
NPC1 |
ENSG00000141458 |
0.886519063719738 |
[1740] |
[652,1098] |
5 |
hSpCas9 |
negative selection |
1377407 |
23556277 |
23556300 |
18 |
+ |
26627737 |
RPE1 |
viability after 18 days |
AAGGGTACATCAGCTCCCGAAGG |
NPC1 |
ENSG00000141458 |
-3.5095028337190803 |
[286] |
[0,12] |
-9 |
hSpCas9 |
negative selection |
1377408 |
23560324 |
23560347 |
18 |
+ |
26627737 |
RPE1 |
viability after 18 days |
AGGATCGTCCAGGGAGCAGGAGG |
NPC1 |
ENSG00000141458 |
-0.34089506134877146 |
[486] |
[198,1] |
-2 |
hSpCas9 |
negative selection |
1377409 |
23561454 |
23561477 |
18 |
+ |
26627737 |
RPE1 |
viability after 18 days |
CTTCCCACACAGGAGTCCCAGGG |
NPC1 |
ENSG00000141458 |
0.37695155047838524 |
[600] |
[286,128] |
2 |
hSpCas9 |
negative selection |
1377410 |
23586289 |
23586312 |
18 |
+ |
26627737 |
RPE1 |
viability after 18 days |
GCGCTGGACACAGTAGCAGCAGG |
NPC1 |
ENSG00000141458 |
1.889668260100743 |
[0] |
[0,0] |
8 |
hSpCas9 |
negative selection |
1377411 |
23551665 |
23551688 |
18 |
+ |
26627737 |
HeLa |
viability after 8 days |
CCACCAAACGTACCCAGACAAGG |
NPC1 |
ENSG00000141458 |
0.5769214909215199 |
[1149] |
[1046,697,572] |
5 |
hSpCas9 |
negative selection |
1459721 |
23554880 |
23554903 |
18 |
+ |
26627737 |
HeLa |
viability after 8 days |
CGTGTTATACGGTGAAAGAGGGG |
NPC1 |
ENSG00000141458 |
-0.6655277088675386 |
[1039] |
[366,311,200] |
-6 |
hSpCas9 |
negative selection |
1459722 |
23556277 |
23556300 |
18 |
+ |
26627737 |
HeLa |
viability after 8 days |
AAGGGTACATCAGCTCCCGAAGG |
NPC1 |
ENSG00000141458 |
-0.8942135776105274 |
[229] |
[60,90,13] |
-7 |
hSpCas9 |
negative selection |
1459723 |
23560324 |
23560347 |
18 |
+ |
26627737 |
HeLa |
viability after 8 days |
AGGATCGTCCAGGGAGCAGGAGG |
NPC1 |
ENSG00000141458 |
-0.981066884795452 |
[317] |
[121,92,10] |
-7 |
hSpCas9 |
negative selection |
1459724 |
23561454 |
23561477 |
18 |
+ |
26627737 |
HeLa |
viability after 8 days |
CTTCCCACACAGGAGTCCCAGGG |
NPC1 |
ENSG00000141458 |
-1.75154168696264 |
[450] |
[136,23,32] |
-9 |
hSpCas9 |
negative selection |
1459725 |
23586289 |
23586312 |
18 |
+ |
26627737 |
HeLa |
viability after 8 days |
GCGCTGGACACAGTAGCAGCAGG |
NPC1 |
ENSG00000141458 |
1.200473099817617 |
[0] |
[0,0,0] |
8 |
hSpCas9 |
negative selection |
1459726 |
23551665 |
23551688 |
18 |
+ |
26627737 |
HeLa |
viability after 12 days |
CCACCAAACGTACCCAGACAAGG |
NPC1 |
ENSG00000141458 |
0.5116342396055331 |
[1149] |
[1064,657,322] |
4 |
hSpCas9 |
negative selection |
1542036 |
23554880 |
23554903 |
18 |
+ |
26627737 |
HeLa |
viability after 12 days |
CGTGTTATACGGTGAAAGAGGGG |
NPC1 |
ENSG00000141458 |
-0.6314445533599841 |
[1039] |
[275,317,233] |
-5 |
hSpCas9 |
negative selection |
1542037 |
23556277 |
23556300 |
18 |
+ |
26627737 |
HeLa |
viability after 12 days |
AAGGGTACATCAGCTCCCGAAGG |
NPC1 |
ENSG00000141458 |
-0.6643080128063198 |
[229] |
[64,88,22] |
-5 |
hSpCas9 |
negative selection |
1542038 |
23560324 |
23560347 |
18 |
+ |
26627737 |
HeLa |
viability after 12 days |
AGGATCGTCCAGGGAGCAGGAGG |
NPC1 |
ENSG00000141458 |
-1.3047032688718796 |
[317] |
[10,84,58] |
-8 |
hSpCas9 |
negative selection |
1542039 |
23561454 |
23561477 |
18 |
+ |
26627737 |
HeLa |
viability after 12 days |
CTTCCCACACAGGAGTCCCAGGG |
NPC1 |
ENSG00000141458 |
-0.49752309470179146 |
[450] |
[270,47,89] |
-4 |
hSpCas9 |
negative selection |
1542040 |
23586289 |
23586312 |
18 |
+ |
26627737 |
HeLa |
viability after 12 days |
GCGCTGGACACAGTAGCAGCAGG |
NPC1 |
ENSG00000141458 |
1.2748581272013126 |
[0] |
[0,0,0] |
8 |
hSpCas9 |
negative selection |
1542041 |
23551665 |
23551688 |
18 |
+ |
26627737 |
HeLa |
viability after 15 days |
CCACCAAACGTACCCAGACAAGG |
NPC1 |
ENSG00000141458 |
0.7464867087329603 |
[1149] |
[787,1160,375] |
6 |
hSpCas9 |
negative selection |
1624351 |
23554880 |
23554903 |
18 |
+ |
26627737 |
HeLa |
viability after 15 days |
CGTGTTATACGGTGAAAGAGGGG |
NPC1 |
ENSG00000141458 |
-0.5508932115733225 |
[1039] |
[167,345,359] |
-5 |
hSpCas9 |
negative selection |
1624352 |
23556277 |
23556300 |
18 |
+ |
26627737 |
HeLa |
viability after 15 days |
AAGGGTACATCAGCTCCCGAAGG |
NPC1 |
ENSG00000141458 |
-0.9842635806111654 |
[229] |
[30,17,96] |
-7 |
hSpCas9 |
negative selection |
1624353 |
23560324 |
23560347 |
18 |
+ |
26627737 |
HeLa |
viability after 15 days |
AGGATCGTCCAGGGAGCAGGAGG |
NPC1 |
ENSG00000141458 |
-0.5960248312083999 |
[317] |
[52,110,93] |
-5 |
hSpCas9 |
negative selection |
1624354 |
23561454 |
23561477 |
18 |
+ |
26627737 |
HeLa |
viability after 15 days |
CTTCCCACACAGGAGTCCCAGGG |
NPC1 |
ENSG00000141458 |
-1.456082184450147 |
[450] |
[46,38,118] |
-8 |
hSpCas9 |
negative selection |
1624355 |
23586289 |
23586312 |
18 |
+ |
26627737 |
HeLa |
viability after 15 days |
GCGCTGGACACAGTAGCAGCAGG |
NPC1 |
ENSG00000141458 |
1.2965331123080048 |
[0] |
[0,0,0] |
8 |
hSpCas9 |
negative selection |
1624356 |
23551665 |
23551688 |
18 |
+ |
26627737 |
HeLa |
viability after 18 days |
CCACCAAACGTACCCAGACAAGG |
NPC1 |
ENSG00000141458 |
0.7438472414467512 |
[1149] |
[534,949,375] |
6 |
hSpCas9 |
negative selection |
1706666 |
23554880 |
23554903 |
18 |
+ |
26627737 |
HeLa |
viability after 18 days |
CGTGTTATACGGTGAAAGAGGGG |
NPC1 |
ENSG00000141458 |
-0.5666855623143309 |
[1039] |
[102,290,359] |
-5 |
hSpCas9 |
negative selection |
1706667 |
23556277 |
23556300 |
18 |
+ |
26627737 |
HeLa |
viability after 18 days |
AAGGGTACATCAGCTCCCGAAGG |
NPC1 |
ENSG00000141458 |
-1.0243610817028537 |
[229] |
[18,13,96] |
-7 |
hSpCas9 |
negative selection |
1706668 |
23560324 |
23560347 |
18 |
+ |
26627737 |
HeLa |
viability after 18 days |
AGGATCGTCCAGGGAGCAGGAGG |
NPC1 |
ENSG00000141458 |
-0.5830069567427506 |
[317] |
[36,91,93] |
-5 |
hSpCas9 |
negative selection |
1706669 |
23561454 |
23561477 |
18 |
+ |
26627737 |
HeLa |
viability after 18 days |
CTTCCCACACAGGAGTCCCAGGG |
NPC1 |
ENSG00000141458 |
-1.453533963317538 |
[450] |
[27,36,118] |
-8 |
hSpCas9 |
negative selection |
1706670 |
23586289 |
23586312 |
18 |
+ |
26627737 |
HeLa |
viability after 18 days |
GCGCTGGACACAGTAGCAGCAGG |
NPC1 |
ENSG00000141458 |
1.6067387639618715 |
[0] |
[0,0,0] |
9 |
hSpCas9 |
negative selection |
1706671 |
23551665 |
23551688 |
18 |
+ |
26627737 |
HCT116 |
viability after 6 days |
CCACCAAACGTACCCAGACAAGG |
NPC1 |
ENSG00000141458 |
1.3628841668209852 |
[1953] |
[218,1104] |
7 |
hSpCas9 |
negative selection |
1788981 |
23554880 |
23554903 |
18 |
+ |
26627737 |
HCT116 |
viability after 6 days |
CGTGTTATACGGTGAAAGAGGGG |
NPC1 |
ENSG00000141458 |
-0.3321453761030204 |
[1313] |
[156,167] |
-2 |
hSpCas9 |
negative selection |
1788982 |
23556277 |
23556300 |
18 |
+ |
26627737 |
HCT116 |
viability after 6 days |
AAGGGTACATCAGCTCCCGAAGG |
NPC1 |
ENSG00000141458 |
0.7282611529603338 |
[124] |
[38,28] |
4 |
hSpCas9 |
negative selection |
1788983 |
23560324 |
23560347 |
18 |
+ |
26627737 |
HCT116 |
viability after 6 days |
AGGATCGTCCAGGGAGCAGGAGG |
NPC1 |
ENSG00000141458 |
-0.17335880038103757 |
[199] |
[72,2] |
-1 |
hSpCas9 |
negative selection |
1788984 |
23561454 |
23561477 |
18 |
+ |
26627737 |
HCT116 |
viability after 6 days |
CTTCCCACACAGGAGTCCCAGGG |
NPC1 |
ENSG00000141458 |
0.6429605307437034 |
[482] |
[37,162] |
3 |
hSpCas9 |
negative selection |
1788985 |
23586289 |
23586312 |
18 |
+ |
26627737 |
HCT116 |
viability after 6 days |
GCGCTGGACACAGTAGCAGCAGG |
NPC1 |
ENSG00000141458 |
2.6692602571875668 |
[0] |
[0,0] |
9 |
hSpCas9 |
negative selection |
1788986 |
23551665 |
23551688 |
18 |
+ |
26627737 |
HCT116 |
viability after 8 days |
CCACCAAACGTACCCAGACAAGG |
NPC1 |
ENSG00000141458 |
0.17296801622882763 |
[1057] |
[712,624,634] |
2 |
hSpCas9 |
negative selection |
1871296 |
23554880 |
23554903 |
18 |
+ |
26627737 |
HCT116 |
viability after 8 days |
CGTGTTATACGGTGAAAGAGGGG |
NPC1 |
ENSG00000141458 |
0.1735003928499439 |
[666] |
[426,341,473] |
2 |
hSpCas9 |
negative selection |
1871297 |
23556277 |
23556300 |
18 |
+ |
26627737 |
HCT116 |
viability after 8 days |
AAGGGTACATCAGCTCCCGAAGG |
NPC1 |
ENSG00000141458 |
-0.2510130028329316 |
[102] |
[33,74,33] |
-3 |
hSpCas9 |
negative selection |
1871298 |
23560324 |
23560347 |
18 |
+ |
26627737 |
HCT116 |
viability after 8 days |
AGGATCGTCCAGGGAGCAGGAGG |
NPC1 |
ENSG00000141458 |
0.7914347569911008 |
[91] |
[97,43,120] |
7 |
hSpCas9 |
negative selection |
1871299 |
23561454 |
23561477 |
18 |
+ |
26627737 |
HCT116 |
viability after 8 days |
CTTCCCACACAGGAGTCCCAGGG |
NPC1 |
ENSG00000141458 |
2.0598809537754503 |
[48] |
[91,184,60] |
9 |
hSpCas9 |
negative selection |
1871300 |
23586289 |
23586312 |
18 |
+ |
26627737 |
HCT116 |
viability after 8 days |
GCGCTGGACACAGTAGCAGCAGG |
NPC1 |
ENSG00000141458 |
0.8598070938499998 |
[0] |
[0,0,0] |
7 |
hSpCas9 |
negative selection |
1871301 |
23551665 |
23551688 |
18 |
+ |
26627737 |
HCT116 |
viability after 9 days |
CCACCAAACGTACCCAGACAAGG |
NPC1 |
ENSG00000141458 |
0.4638155986440591 |
[1953] |
[670,757] |
3 |
hSpCas9 |
negative selection |
1953611 |
23554880 |
23554903 |
18 |
+ |
26627737 |
HCT116 |
viability after 9 days |
CGTGTTATACGGTGAAAGAGGGG |
NPC1 |
ENSG00000141458 |
-0.9908304189998235 |
[1313] |
[280,93] |
-6 |
hSpCas9 |
negative selection |
1953612 |
23556277 |
23556300 |
18 |
+ |
26627737 |
HCT116 |
viability after 9 days |
AAGGGTACATCAGCTCCCGAAGG |
NPC1 |
ENSG00000141458 |
0.058800988882529825 |
[124] |
[36,32] |
0 |
hSpCas9 |
negative selection |
1953613 |
23560324 |
23560347 |
18 |
+ |
26627737 |
HCT116 |
viability after 9 days |
AGGATCGTCCAGGGAGCAGGAGG |
NPC1 |
ENSG00000141458 |
0.37022306565251784 |
[199] |
[63,72] |
2 |
hSpCas9 |
negative selection |
1953614 |
23561454 |
23561477 |
18 |
+ |
26627737 |
HCT116 |
viability after 9 days |
CTTCCCACACAGGAGTCCCAGGG |
NPC1 |
ENSG00000141458 |
1.0275351450335823 |
[482] |
[382,167] |
7 |
hSpCas9 |
negative selection |
1953615 |
23586289 |
23586312 |
18 |
+ |
26627737 |
HCT116 |
viability after 9 days |
GCGCTGGACACAGTAGCAGCAGG |
NPC1 |
ENSG00000141458 |
1.9049898113534676 |
[0] |
[0,0] |
9 |
hSpCas9 |
negative selection |
1953616 |
23551665 |
23551688 |
18 |
+ |
26627737 |
HCT116 |
viability after 12 days |
CCACCAAACGTACCCAGACAAGG |
NPC1 |
ENSG00000141458 |
-0.1084082300911402 |
[1057] |
[709,506,312] |
-1 |
hSpCas9 |
negative selection |
2035926 |
23554880 |
23554903 |
18 |
+ |
26627737 |
HCT116 |
viability after 12 days |
CGTGTTATACGGTGAAAGAGGGG |
NPC1 |
ENSG00000141458 |
0.26556068293800017 |
[666] |
[382,442,441] |
2 |
hSpCas9 |
negative selection |
2035927 |
23556277 |
23556300 |
18 |
+ |
26627737 |
HCT116 |
viability after 12 days |
AAGGGTACATCAGCTCCCGAAGG |
NPC1 |
ENSG00000141458 |
0.21455330402502515 |
[102] |
[30,94,65] |
2 |
hSpCas9 |
negative selection |
2035928 |
23560324 |
23560347 |
18 |
+ |
26627737 |
HCT116 |
viability after 12 days |
AGGATCGTCCAGGGAGCAGGAGG |
NPC1 |
ENSG00000141458 |
0.6308040295560664 |
[91] |
[34,70,121] |
6 |
hSpCas9 |
negative selection |
2035929 |
23561454 |
23561477 |
18 |
+ |
26627737 |
HCT116 |
viability after 12 days |
CTTCCCACACAGGAGTCCCAGGG |
NPC1 |
ENSG00000141458 |
2.2292527406317078 |
[48] |
[96,148,118] |
9 |
hSpCas9 |
negative selection |
2035930 |
23586289 |
23586312 |
18 |
+ |
26627737 |
HCT116 |
viability after 12 days |
GCGCTGGACACAGTAGCAGCAGG |
NPC1 |
ENSG00000141458 |
0.9281650954308303 |
[0] |
[0,0,0] |
7 |
hSpCas9 |
negative selection |
2035931 |
23551665 |
23551688 |
18 |
+ |
26627737 |
HCT116 |
viability after 15 days |
CCACCAAACGTACCCAGACAAGG |
NPC1 |
ENSG00000141458 |
0.03955311910565684 |
[1057] |
[940,429,541] |
0 |
hSpCas9 |
negative selection |
2118241 |
23554880 |
23554903 |
18 |
+ |
26627737 |
HCT116 |
viability after 15 days |
CGTGTTATACGGTGAAAGAGGGG |
NPC1 |
ENSG00000141458 |
0.07478785917707187 |
[666] |
[459,337,418] |
0 |
hSpCas9 |
negative selection |
2118242 |
23556277 |
23556300 |
18 |
+ |
26627737 |
HCT116 |
viability after 15 days |
AAGGGTACATCAGCTCCCGAAGG |
NPC1 |
ENSG00000141458 |
0.5364753805803617 |
[102] |
[116,42,100] |
5 |
hSpCas9 |
negative selection |
2118243 |
23560324 |
23560347 |
18 |
+ |
26627737 |
HCT116 |
viability after 15 days |
AGGATCGTCCAGGGAGCAGGAGG |
NPC1 |
ENSG00000141458 |
0.4189964807650086 |
[91] |
[59,110,39] |
4 |
hSpCas9 |
negative selection |
2118244 |
23561454 |
23561477 |
18 |
+ |
26627737 |
HCT116 |
viability after 15 days |
CTTCCCACACAGGAGTCCCAGGG |
NPC1 |
ENSG00000141458 |
2.3677208392784364 |
[48] |
[279,99,72] |
9 |
hSpCas9 |
negative selection |
2118245 |
23586289 |
23586312 |
18 |
+ |
26627737 |
HCT116 |
viability after 15 days |
GCGCTGGACACAGTAGCAGCAGG |
NPC1 |
ENSG00000141458 |
0.8001368291432343 |
[0] |
[0,0,0] |
7 |
hSpCas9 |
negative selection |
2118246 |
23551665 |
23551688 |
18 |
+ |
26627737 |
HCT116 |
viability after 18 days |
CCACCAAACGTACCCAGACAAGG |
NPC1 |
ENSG00000141458 |
0.38678024111241105 |
[1057] |
[790,543,679] |
3 |
hSpCas9 |
negative selection |
2200556 |
23554880 |
23554903 |
18 |
+ |
26627737 |
HCT116 |
viability after 18 days |
CGTGTTATACGGTGAAAGAGGGG |
NPC1 |
ENSG00000141458 |
0.3720434709790186 |
[666] |
[412,358,486] |
3 |
hSpCas9 |
negative selection |
2200557 |
23556277 |
23556300 |
18 |
+ |
26627737 |
HCT116 |
viability after 18 days |
AAGGGTACATCAGCTCCCGAAGG |
NPC1 |
ENSG00000141458 |
-0.19003822003977922 |
[102] |
[54,29,46] |
-2 |
hSpCas9 |
negative selection |
2200558 |
23560324 |
23560347 |
18 |
+ |
26627737 |
HCT116 |
viability after 18 days |
AGGATCGTCCAGGGAGCAGGAGG |
NPC1 |
ENSG00000141458 |
1.045222531724785 |
[91] |
[77,91,105] |
7 |
hSpCas9 |
negative selection |
2200559 |
23561454 |
23561477 |
18 |
+ |
26627737 |
HCT116 |
viability after 18 days |
CTTCCCACACAGGAGTCCCAGGG |
NPC1 |
ENSG00000141458 |
2.447020192914512 |
[48] |
[145,160,75] |
9 |
hSpCas9 |
negative selection |
2200560 |
23586289 |
23586312 |
18 |
+ |
26627737 |
HCT116 |
viability after 18 days |
GCGCTGGACACAGTAGCAGCAGG |
NPC1 |
ENSG00000141458 |
1.0485523756554223 |
[0] |
[0,0,0] |
7 |
hSpCas9 |
negative selection |
2200561 |
23573537 |
23573560 |
18 |
- |
24336569 |
HL60 |
viability |
TGTGTTTGGTATGGAGAGTGTGG |
NPC1 |
ENSG00000141458 |
-0.18862759557792708 |
[893] |
[1659] |
-2 |
hSpCas9 |
negative selection |
2280935 |
23573546 |
23573569 |
18 |
- |
24336569 |
HL60 |
viability |
TCACAGTCCTGTGTTTGGTATGG |
NPC1 |
ENSG00000141458 |
-0.22364137962785346 |
[942] |
[1708] |
-2 |
hSpCas9 |
negative selection |
2280936 |
23586273 |
23586296 |
18 |
+ |
24336569 |
HL60 |
viability |
CGGCGACCGCTCACCTGCGCTGG |
NPC1 |
ENSG00000141458 |
-0.40440189697416895 |
[535] |
[856] |
-4 |
hSpCas9 |
negative selection |
2280937 |
23586286 |
23586309 |
18 |
- |
24336569 |
HL60 |
viability |
GCTGCTACTGTGTCCAGCGCAGG |
NPC1 |
ENSG00000141458 |
-0.9893458986404648 |
[90] |
[96] |
-7 |
hSpCas9 |
negative selection |
2280938 |
23586292 |
23586315 |
18 |
+ |
24336569 |
HL60 |
viability |
CTGGACACAGTAGCAGCAGGAGG |
NPC1 |
ENSG00000141458 |
0.34592450176648576 |
[566] |
[1524] |
3 |
hSpCas9 |
negative selection |
2280939 |
23586301 |
23586324 |
18 |
+ |
24336569 |
HL60 |
viability |
GTAGCAGCAGGAGGAGGCCAAGG |
NPC1 |
ENSG00000141458 |
-0.8126061523525292 |
[1400] |
[1687] |
-6 |
hSpCas9 |
negative selection |
2280940 |
23586307 |
23586330 |
18 |
+ |
24336569 |
HL60 |
viability |
GCAGGAGGAGGCCAAGGGCCAGG |
NPC1 |
ENSG00000141458 |
-0.4245380043878074 |
[944] |
[1489] |
-4 |
hSpCas9 |
negative selection |
2280941 |
23586317 |
23586340 |
18 |
+ |
24336569 |
HL60 |
viability |
GCCAAGGGCCAGGCCGCGAGCGG |
NPC1 |
ENSG00000141458 |
0.6091085880528586 |
[631] |
[2039] |
5 |
hSpCas9 |
negative selection |
2280942 |
23586325 |
23586348 |
18 |
- |
24336569 |
HL60 |
viability |
CAGCATGACCGCTCGCGGCCTGG |
NPC1 |
ENSG00000141458 |
-0.6694104597888739 |
[362] |
[482] |
-6 |
hSpCas9 |
negative selection |
2280943 |
23586330 |
23586353 |
18 |
- |
24336569 |
HL60 |
viability |
GGCCACAGCATGACCGCTCGCGG |
NPC1 |
ENSG00000141458 |
0.7386802618788422 |
[368] |
[1302] |
6 |
hSpCas9 |
negative selection |
2280944 |
23573537 |
23573560 |
18 |
- |
24336569 |
KBM7 |
viability |
TGTGTTTGGTATGGAGAGTGTGG |
NPC1 |
ENSG00000141458 |
0.5213493575181115 |
[703] |
[2755] |
5 |
hSpCas9 |
negative selection |
2348112 |
23573546 |
23573569 |
18 |
- |
24336569 |
KBM7 |
viability |
TCACAGTCCTGTGTTTGGTATGG |
NPC1 |
ENSG00000141458 |
-0.18876547365105467 |
[541] |
[1296] |
-2 |
hSpCas9 |
negative selection |
2348113 |
23586273 |
23586296 |
18 |
+ |
24336569 |
KBM7 |
viability |
CGGCGACCGCTCACCTGCGCTGG |
NPC1 |
ENSG00000141458 |
0.12222349700126789 |
[286] |
[851] |
1 |
hSpCas9 |
negative selection |
2348114 |
23586286 |
23586309 |
18 |
- |
24336569 |
KBM7 |
viability |
GCTGCTACTGTGTCCAGCGCAGG |
NPC1 |
ENSG00000141458 |
-1.1327058591954708 |
[122] |
[152] |
-7 |
hSpCas9 |
negative selection |
2348115 |
23586292 |
23586315 |
18 |
+ |
24336569 |
KBM7 |
viability |
CTGGACACAGTAGCAGCAGGAGG |
NPC1 |
ENSG00000141458 |
-0.03870268189671283 |
[527] |
[1401] |
0 |
hSpCas9 |
negative selection |
2348116 |
23586301 |
23586324 |
18 |
+ |
24336569 |
KBM7 |
viability |
GTAGCAGCAGGAGGAGGCCAAGG |
NPC1 |
ENSG00000141458 |
-2.3008080038182577 |
[662] |
[366] |
-8 |
hSpCas9 |
negative selection |
2348117 |
23586307 |
23586330 |
18 |
+ |
24336569 |
KBM7 |
viability |
GCAGGAGGAGGCCAAGGGCCAGG |
NPC1 |
ENSG00000141458 |
0.2120681137725275 |
[526] |
[1664] |
2 |
hSpCas9 |
negative selection |
2348118 |
23586317 |
23586340 |
18 |
+ |
24336569 |
KBM7 |
viability |
GCCAAGGGCCAGGCCGCGAGCGG |
NPC1 |
ENSG00000141458 |
-0.8745398632035458 |
[647] |
[963] |
-6 |
hSpCas9 |
negative selection |
2348119 |
23586325 |
23586348 |
18 |
- |
24336569 |
KBM7 |
viability |
CAGCATGACCGCTCGCGGCCTGG |
NPC1 |
ENSG00000141458 |
1.1600211078520053 |
[136] |
[834] |
8 |
hSpCas9 |
negative selection |
2348120 |
23586330 |
23586353 |
18 |
- |
24336569 |
KBM7 |
viability |
GGCCACAGCATGACCGCTCGCGG |
NPC1 |
ENSG00000141458 |
0.05727656497843034 |
[431] |
[1225] |
0 |
hSpCas9 |
negative selection |
2348121 |
23586767 |
23586790 |
18 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
AGCGAAGGGTAGTGCTGTTCTGG |
NPC1 |
ENSG00000141458 |
-1.0893537850186092 |
[110,513] |
[41,21] |
-6 |
dCas9-VP64 |
positive selection |
2383549 |
23586794 |
23586817 |
18 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
CTTCCGGGTAAGGTCCCGCCCGG |
NPC1 |
ENSG00000141458 |
-1.8278009597444271 |
[28,229] |
[2,12] |
-8 |
dCas9-VP64 |
positive selection |
2383550 |
23586692 |
23586715 |
18 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
GGAGTTGTGCCAACGGTTTCTGG |
NPC1 |
ENSG00000141458 |
1.0616345503534974 |
[60,6] |
[23,5] |
4 |
dCas9-VP64 |
positive selection |
2383551 |
23571609 |
23571632 |
18 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
ATGCCACTGTACTCCAGCCTCGG |
NPC1 |
ENSG00000141458 |
-1.9834711090057278 |
[190,159] |
[9,8] |
-9 |
dCas9-VP64 |
positive selection |
2385615 |
23512133 |
23512156 |
18 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
GCCTCAGCCTCCCAAGTAGCTGG |
NPC1 |
ENSG00000141458 |
0.6911400425855385 |
[25,30] |
[5,13] |
3 |
dCas9-VP64 |
positive selection |
2396580 |
23517932 |
23517955 |
18 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
GGTCTTGAACTCCTGGGCTCGGG |
NPC1 |
ENSG00000141458 |
4.2770735618878515 |
[141,50] |
[775,15] |
9 |
dCas9-VP64 |
positive selection |
2397425 |
23586767 |
23586790 |
18 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
AGCGAAGGGTAGTGCTGTTCTGG |
NPC1 |
ENSG00000141458 |
0.31427817211932474 |
[82,30] |
[39,6] |
2 |
dCas9-VP64 |
positive selection |
2478804 |
23586794 |
23586817 |
18 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
CTTCCGGGTAAGGTCCCGCCCGG |
NPC1 |
ENSG00000141458 |
3.0595014394508713 |
[36,60] |
[10,249] |
9 |
dCas9-VP64 |
positive selection |
2478805 |
23586692 |
23586715 |
18 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
GGAGTTGTGCCAACGGTTTCTGG |
NPC1 |
ENSG00000141458 |
0.61783081525595 |
[73,39] |
[9,44] |
4 |
dCas9-VP64 |
positive selection |
2478806 |
23571609 |
23571632 |
18 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
ATGCCACTGTACTCCAGCCTCGG |
NPC1 |
ENSG00000141458 |
-0.49457347436203747 |
[225,196] |
[51,45] |
-5 |
dCas9-VP64 |
positive selection |
2480870 |
23512133 |
23512156 |
18 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
GCCTCAGCCTCCCAAGTAGCTGG |
NPC1 |
ENSG00000141458 |
0.4030393266100577 |
[90,274] |
[19,131] |
3 |
dCas9-VP64 |
positive selection |
2491835 |
23517932 |
23517955 |
18 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
GGTCTTGAACTCCTGGGCTCGGG |
NPC1 |
ENSG00000141458 |
0.8672449668792414 |
[148,204] |
[104,104] |
6 |
dCas9-VP64 |
positive selection |
2492680 |
23573546 |
23573569 |
18 |
- |
27260157 |
DLD1 |
viability |
TCACAGTCCTGTGTTTGGTATGG |
NPC1 |
ENSG00000141458 |
-0.815630098352442 |
[] |
[] |
-6 |
hSpCas9 |
negative selection |
2574596 |
23586292 |
23586315 |
18 |
+ |
27260157 |
DLD1 |
viability |
CTGGACACAGTAGCAGCAGGAGG |
NPC1 |
ENSG00000141458 |
0.186030001341355 |
[] |
[] |
3 |
hSpCas9 |
negative selection |
2577219 |
23560412 |
23560435 |
18 |
- |
27260157 |
DLD1 |
viability |
CTGTGACGAGTCTGTGGATGAGG |
NPC1 |
ENSG00000141458 |
0.60376549273877 |
[] |
[] |
8 |
hSpCas9 |
negative selection |
2578398 |
23586273 |
23586296 |
18 |
+ |
27260157 |
DLD1 |
viability |
CGGCGACCGCTCACCTGCGCTGG |
NPC1 |
ENSG00000141458 |
-0.365808389654204 |
[] |
[] |
-3 |
hSpCas9 |
negative selection |
2580485 |
23586301 |
23586324 |
18 |
+ |
27260157 |
DLD1 |
viability |
GTAGCAGCAGGAGGAGGCCAAGG |
NPC1 |
ENSG00000141458 |
-0.812103293558422 |
[] |
[] |
-6 |
hSpCas9 |
negative selection |
2582785 |
23560316 |
23560339 |
18 |
- |
27260157 |
DLD1 |
viability |
TCCCTGGACGATCCTTGGCTTGG |
NPC1 |
ENSG00000141458 |
-0.112477013278598 |
[] |
[] |
-1 |
hSpCas9 |
negative selection |
2584268 |
23560304 |
23560327 |
18 |
+ |
27260157 |
DLD1 |
viability |
CATACATGGCGTCCAAGCCAAGG |
NPC1 |
ENSG00000141458 |
-0.401281560044531 |
[] |
[] |
-3 |
hSpCas9 |
negative selection |
2586792 |
23573537 |
23573560 |
18 |
- |
27260157 |
DLD1 |
viability |
TGTGTTTGGTATGGAGAGTGTGG |
NPC1 |
ENSG00000141458 |
-1.26756954912895 |
[] |
[] |
-7 |
hSpCas9 |
negative selection |
2605483 |
23560314 |
23560337 |
18 |
+ |
27260157 |
DLD1 |
viability |
GTCCAAGCCAAGGATCGTCCAGG |
NPC1 |
ENSG00000141458 |
0.111486568650595 |
[] |
[] |
3 |
hSpCas9 |
negative selection |
2605881 |
23586330 |
23586353 |
18 |
- |
27260157 |
DLD1 |
viability |
GGCCACAGCATGACCGCTCGCGG |
NPC1 |
ENSG00000141458 |
0.0844528789806368 |
[] |
[] |
3 |
hSpCas9 |
negative selection |
2607717 |
23561421 |
23561444 |
18 |
+ |
27260157 |
DLD1 |
viability |
AATCCAGTTGGTGGCATTACAGG |
NPC1 |
ENSG00000141458 |
-0.400150873974859 |
[] |
[] |
-3 |
hSpCas9 |
negative selection |
2609177 |
23556582 |
23556605 |
18 |
+ |
27260157 |
DLD1 |
viability |
TGCGCTGACAGGGTCACAGCAGG |
NPC1 |
ENSG00000141458 |
-0.811423152909902 |
[] |
[] |
-6 |
hSpCas9 |
negative selection |
2614338 |
23560280 |
23560303 |
18 |
- |
27260157 |
DLD1 |
viability |
CATCATGTGGATCACCTACATGG |
NPC1 |
ENSG00000141458 |
0.936715507168286 |
[] |
[] |
9 |
hSpCas9 |
negative selection |
2618318 |
23586307 |
23586330 |
18 |
+ |
27260157 |
DLD1 |
viability |
GCAGGAGGAGGCCAAGGGCCAGG |
NPC1 |
ENSG00000141458 |
1.09044946499851 |
[] |
[] |
9 |
hSpCas9 |
negative selection |
2643586 |
23586317 |
23586340 |
18 |
+ |
27260157 |
DLD1 |
viability |
GCCAAGGGCCAGGCCGCGAGCGG |
NPC1 |
ENSG00000141458 |
0.500287122427968 |
[] |
[] |
8 |
hSpCas9 |
negative selection |
2644411 |
23560434 |
23560457 |
18 |
+ |
27260157 |
DLD1 |
viability |
GCCTTTGGTGGCATTGTTCATGG |
NPC1 |
ENSG00000141458 |
-0.494454490577288 |
[] |
[] |
-4 |
hSpCas9 |
negative selection |
2644419 |
23573546 |
23573569 |
18 |
- |
27260157 |
HT1080 |
viability |
TCACAGTCCTGTGTTTGGTATGG |
NPC1 |
ENSG00000141458 |
-0.0654518583625935 |
[] |
[] |
0 |
hSpCas9 |
negative selection |
2650726 |
23586292 |
23586315 |
18 |
+ |
27260157 |
HT1080 |
viability |
CTGGACACAGTAGCAGCAGGAGG |
NPC1 |
ENSG00000141458 |
0.482074179603055 |
[] |
[] |
4 |
hSpCas9 |
negative selection |
2653349 |
23560412 |
23560435 |
18 |
- |
27260157 |
HT1080 |
viability |
CTGTGACGAGTCTGTGGATGAGG |
NPC1 |
ENSG00000141458 |
-0.0584400765526632 |
[] |
[] |
0 |
hSpCas9 |
negative selection |
2654528 |
23586273 |
23586296 |
18 |
+ |
27260157 |
HT1080 |
viability |
CGGCGACCGCTCACCTGCGCTGG |
NPC1 |
ENSG00000141458 |
-0.639318249336121 |
[] |
[] |
-8 |
hSpCas9 |
negative selection |
2656615 |
23586301 |
23586324 |
18 |
+ |
27260157 |
HT1080 |
viability |
GTAGCAGCAGGAGGAGGCCAAGG |
NPC1 |
ENSG00000141458 |
-1.02281841329237 |
[] |
[] |
-8 |
hSpCas9 |
negative selection |
2658915 |
23560316 |
23560339 |
18 |
- |
27260157 |
HT1080 |
viability |
TCCCTGGACGATCCTTGGCTTGG |
NPC1 |
ENSG00000141458 |
-0.212223076472236 |
[] |
[] |
0 |
hSpCas9 |
negative selection |
2660398 |
23560304 |
23560327 |
18 |
+ |
27260157 |
HT1080 |
viability |
CATACATGGCGTCCAAGCCAAGG |
NPC1 |
ENSG00000141458 |
0.657206450965577 |
[] |
[] |
6 |
hSpCas9 |
negative selection |
2662922 |
23573537 |
23573560 |
18 |
- |
27260157 |
HT1080 |
viability |
TGTGTTTGGTATGGAGAGTGTGG |
NPC1 |
ENSG00000141458 |
-1.0099432359486 |
[] |
[] |
-8 |
hSpCas9 |
negative selection |
2681613 |
23560314 |
23560337 |
18 |
+ |
27260157 |
HT1080 |
viability |
GTCCAAGCCAAGGATCGTCCAGG |
NPC1 |
ENSG00000141458 |
0.939913167474407 |
[] |
[] |
7 |
hSpCas9 |
negative selection |
2682011 |
23586330 |
23586353 |
18 |
- |
27260157 |
HT1080 |
viability |
GGCCACAGCATGACCGCTCGCGG |
NPC1 |
ENSG00000141458 |
-0.251024988655304 |
[] |
[] |
0 |
hSpCas9 |
negative selection |
2683847 |
23561421 |
23561444 |
18 |
+ |
27260157 |
HT1080 |
viability |
AATCCAGTTGGTGGCATTACAGG |
NPC1 |
ENSG00000141458 |
-0.0616408889317357 |
[] |
[] |
0 |
hSpCas9 |
negative selection |
2685307 |
23556582 |
23556605 |
18 |
+ |
27260157 |
HT1080 |
viability |
TGCGCTGACAGGGTCACAGCAGG |
NPC1 |
ENSG00000141458 |
0.00359102869496876 |
[] |
[] |
0 |
hSpCas9 |
negative selection |
2690468 |
23560280 |
23560303 |
18 |
- |
27260157 |
HT1080 |
viability |
CATCATGTGGATCACCTACATGG |
NPC1 |
ENSG00000141458 |
1.15671641643068 |
[] |
[] |
8 |
hSpCas9 |
negative selection |
2694448 |
23586307 |
23586330 |
18 |
+ |
27260157 |
HT1080 |
viability |
GCAGGAGGAGGCCAAGGGCCAGG |
NPC1 |
ENSG00000141458 |
-0.198520486525221 |
[] |
[] |
0 |
hSpCas9 |
negative selection |
2719716 |
23586317 |
23586340 |
18 |
+ |
27260157 |
HT1080 |
viability |
GCCAAGGGCCAGGCCGCGAGCGG |
NPC1 |
ENSG00000141458 |
1.02190682503547 |
[] |
[] |
8 |
hSpCas9 |
negative selection |
2720541 |
23560434 |
23560457 |
18 |
+ |
27260157 |
HT1080 |
viability |
GCCTTTGGTGGCATTGTTCATGG |
NPC1 |
ENSG00000141458 |
-0.0638233833241049 |
[] |
[] |
0 |
hSpCas9 |
negative selection |
2720549 |
23573546 |
23573569 |
18 |
- |
27260157 |
MKN45 |
viability |
TCACAGTCCTGTGTTTGGTATGG |
NPC1 |
ENSG00000141458 |
-0.899138995789744 |
[] |
[] |
-7 |
hSpCas9 |
negative selection |
2726856 |
23586292 |
23586315 |
18 |
+ |
27260157 |
MKN45 |
viability |
CTGGACACAGTAGCAGCAGGAGG |
NPC1 |
ENSG00000141458 |
0.218394652661967 |
[] |
[] |
5 |
hSpCas9 |
negative selection |
2729479 |
23560412 |
23560435 |
18 |
- |
27260157 |
MKN45 |
viability |
CTGTGACGAGTCTGTGGATGAGG |
NPC1 |
ENSG00000141458 |
-0.511181659968091 |
[] |
[] |
-6 |
hSpCas9 |
negative selection |
2730658 |
23586273 |
23586296 |
18 |
+ |
27260157 |
MKN45 |
viability |
CGGCGACCGCTCACCTGCGCTGG |
NPC1 |
ENSG00000141458 |
-1.6034236342137 |
[] |
[] |
-9 |
hSpCas9 |
negative selection |
2732745 |
23586301 |
23586324 |
18 |
+ |
27260157 |
MKN45 |
viability |
GTAGCAGCAGGAGGAGGCCAAGG |
NPC1 |
ENSG00000141458 |
-0.488133021968525 |
[] |
[] |
-6 |
hSpCas9 |
negative selection |
2735045 |
23560316 |
23560339 |
18 |
- |
27260157 |
MKN45 |
viability |
TCCCTGGACGATCCTTGGCTTGG |
NPC1 |
ENSG00000141458 |
-0.638131227804703 |
[] |
[] |
-6 |
hSpCas9 |
negative selection |
2736528 |
23560304 |
23560327 |
18 |
+ |
27260157 |
MKN45 |
viability |
CATACATGGCGTCCAAGCCAAGG |
NPC1 |
ENSG00000141458 |
-0.390044385324755 |
[] |
[] |
-1 |
hSpCas9 |
negative selection |
2739052 |
23573537 |
23573560 |
18 |
- |
27260157 |
MKN45 |
viability |
TGTGTTTGGTATGGAGAGTGTGG |
NPC1 |
ENSG00000141458 |
-1.83583217052075 |
[] |
[] |
-9 |
hSpCas9 |
negative selection |
2757743 |
23560314 |
23560337 |
18 |
+ |
27260157 |
MKN45 |
viability |
GTCCAAGCCAAGGATCGTCCAGG |
NPC1 |
ENSG00000141458 |
-0.0717168279173433 |
[] |
[] |
0 |
hSpCas9 |
negative selection |
2758141 |
23586330 |
23586353 |
18 |
- |
27260157 |
MKN45 |
viability |
GGCCACAGCATGACCGCTCGCGG |
NPC1 |
ENSG00000141458 |
0.361577814018878 |
[] |
[] |
6 |
hSpCas9 |
negative selection |
2759977 |
23561421 |
23561444 |
18 |
+ |
27260157 |
MKN45 |
viability |
AATCCAGTTGGTGGCATTACAGG |
NPC1 |
ENSG00000141458 |
-0.0662485448189666 |
[] |
[] |
0 |
hSpCas9 |
negative selection |
2761437 |
23556582 |
23556605 |
18 |
+ |
27260157 |
MKN45 |
viability |
TGCGCTGACAGGGTCACAGCAGG |
NPC1 |
ENSG00000141458 |
-1.5765628568603 |
[] |
[] |
-9 |
hSpCas9 |
negative selection |
2766598 |
23560280 |
23560303 |
18 |
- |
27260157 |
MKN45 |
viability |
CATCATGTGGATCACCTACATGG |
NPC1 |
ENSG00000141458 |
0.962446708846168 |
[] |
[] |
8 |
hSpCas9 |
negative selection |
2770578 |
23586307 |
23586330 |
18 |
+ |
27260157 |
MKN45 |
viability |
GCAGGAGGAGGCCAAGGGCCAGG |
NPC1 |
ENSG00000141458 |
1.45600592112098 |
[] |
[] |
9 |
hSpCas9 |
negative selection |
2795846 |
23586317 |
23586340 |
18 |
+ |
27260157 |
MKN45 |
viability |
GCCAAGGGCCAGGCCGCGAGCGG |
NPC1 |
ENSG00000141458 |
0.150268526582002 |
[] |
[] |
5 |
hSpCas9 |
negative selection |
2796671 |
23560434 |
23560457 |
18 |
+ |
27260157 |
MKN45 |
viability |
GCCTTTGGTGGCATTGTTCATGG |
NPC1 |
ENSG00000141458 |
0.447994795367614 |
[] |
[] |
6 |
hSpCas9 |
negative selection |
2796679 |
23573546 |
23573569 |
18 |
- |
27260157 |
RKO |
viability |
TCACAGTCCTGTGTTTGGTATGG |
NPC1 |
ENSG00000141458 |
0.304854037860831 |
[] |
[] |
1 |
hSpCas9 |
negative selection |
2802986 |
23586292 |
23586315 |
18 |
+ |
27260157 |
RKO |
viability |
CTGGACACAGTAGCAGCAGGAGG |
NPC1 |
ENSG00000141458 |
0.48114668633173 |
[] |
[] |
2 |
hSpCas9 |
negative selection |
2805609 |
23560412 |
23560435 |
18 |
- |
27260157 |
RKO |
viability |
CTGTGACGAGTCTGTGGATGAGG |
NPC1 |
ENSG00000141458 |
-0.493191174872833 |
[] |
[] |
-6 |
hSpCas9 |
negative selection |
2806788 |
23586273 |
23586296 |
18 |
+ |
27260157 |
RKO |
viability |
CGGCGACCGCTCACCTGCGCTGG |
NPC1 |
ENSG00000141458 |
-1.08242222844139 |
[] |
[] |
-8 |
hSpCas9 |
negative selection |
2808875 |
23586301 |
23586324 |
18 |
+ |
27260157 |
RKO |
viability |
GTAGCAGCAGGAGGAGGCCAAGG |
NPC1 |
ENSG00000141458 |
-0.666378347211582 |
[] |
[] |
-7 |
hSpCas9 |
negative selection |
2811175 |
23560316 |
23560339 |
18 |
- |
27260157 |
RKO |
viability |
TCCCTGGACGATCCTTGGCTTGG |
NPC1 |
ENSG00000141458 |
-0.209232418349388 |
[] |
[] |
-1 |
hSpCas9 |
negative selection |
2812658 |
23560304 |
23560327 |
18 |
+ |
27260157 |
RKO |
viability |
CATACATGGCGTCCAAGCCAAGG |
NPC1 |
ENSG00000141458 |
0.296422308214465 |
[] |
[] |
1 |
hSpCas9 |
negative selection |
2815182 |
23573537 |
23573560 |
18 |
- |
27260157 |
RKO |
viability |
TGTGTTTGGTATGGAGAGTGTGG |
NPC1 |
ENSG00000141458 |
0.0107432313851004 |
[] |
[] |
0 |
hSpCas9 |
negative selection |
2833873 |
23560314 |
23560337 |
18 |
+ |
27260157 |
RKO |
viability |
GTCCAAGCCAAGGATCGTCCAGG |
NPC1 |
ENSG00000141458 |
1.86791934565163 |
[] |
[] |
9 |
hSpCas9 |
negative selection |
2834271 |
23586330 |
23586353 |
18 |
- |
27260157 |
RKO |
viability |
GGCCACAGCATGACCGCTCGCGG |
NPC1 |
ENSG00000141458 |
0.346995289409317 |
[] |
[] |
1 |
hSpCas9 |
negative selection |
2836107 |
23561421 |
23561444 |
18 |
+ |
27260157 |
RKO |
viability |
AATCCAGTTGGTGGCATTACAGG |
NPC1 |
ENSG00000141458 |
0.639716531276462 |
[] |
[] |
3 |
hSpCas9 |
negative selection |
2837567 |
23556582 |
23556605 |
18 |
+ |
27260157 |
RKO |
viability |
TGCGCTGACAGGGTCACAGCAGG |
NPC1 |
ENSG00000141458 |
-0.514625368193884 |
[] |
[] |
-6 |
hSpCas9 |
negative selection |
2842728 |
23560280 |
23560303 |
18 |
- |
27260157 |
RKO |
viability |
CATCATGTGGATCACCTACATGG |
NPC1 |
ENSG00000141458 |
1.42097250654308 |
[] |
[] |
9 |
hSpCas9 |
negative selection |
2846708 |
23586307 |
23586330 |
18 |
+ |
27260157 |
RKO |
viability |
GCAGGAGGAGGCCAAGGGCCAGG |
NPC1 |
ENSG00000141458 |
0.618479040214076 |
[] |
[] |
3 |
hSpCas9 |
negative selection |
2871976 |
23586317 |
23586340 |
18 |
+ |
27260157 |
RKO |
viability |
GCCAAGGGCCAGGCCGCGAGCGG |
NPC1 |
ENSG00000141458 |
0.40161471531439 |
[] |
[] |
2 |
hSpCas9 |
negative selection |
2872801 |
23560434 |
23560457 |
18 |
+ |
27260157 |
RKO |
viability |
GCCTTTGGTGGCATTGTTCATGG |
NPC1 |
ENSG00000141458 |
-0.286828229201112 |
[] |
[] |
-5 |
hSpCas9 |
negative selection |
2872809 |
23573546 |
23573569 |
18 |
- |
27260157 |
SF268 |
viability |
TCACAGTCCTGTGTTTGGTATGG |
NPC1 |
ENSG00000141458 |
-0.801970352019631 |
[] |
[] |
-6 |
hSpCas9 |
negative selection |
2879116 |
23586292 |
23586315 |
18 |
+ |
27260157 |
SF268 |
viability |
CTGGACACAGTAGCAGCAGGAGG |
NPC1 |
ENSG00000141458 |
0.338155967528203 |
[] |
[] |
4 |
hSpCas9 |
negative selection |
2881739 |
23560412 |
23560435 |
18 |
- |
27260157 |
SF268 |
viability |
CTGTGACGAGTCTGTGGATGAGG |
NPC1 |
ENSG00000141458 |
0.00837721250740387 |
[] |
[] |
0 |
hSpCas9 |
negative selection |
2882918 |
23586273 |
23586296 |
18 |
+ |
27260157 |
SF268 |
viability |
CGGCGACCGCTCACCTGCGCTGG |
NPC1 |
ENSG00000141458 |
-1.29233692376286 |
[] |
[] |
-7 |
hSpCas9 |
negative selection |
2885005 |
23586301 |
23586324 |
18 |
+ |
27260157 |
SF268 |
viability |
GTAGCAGCAGGAGGAGGCCAAGG |
NPC1 |
ENSG00000141458 |
-1.09133992748244 |
[] |
[] |
-7 |
hSpCas9 |
negative selection |
2887305 |
23560316 |
23560339 |
18 |
- |
27260157 |
SF268 |
viability |
TCCCTGGACGATCCTTGGCTTGG |
NPC1 |
ENSG00000141458 |
-0.335732270246754 |
[] |
[] |
-3 |
hSpCas9 |
negative selection |
2888788 |
23560304 |
23560327 |
18 |
+ |
27260157 |
SF268 |
viability |
CATACATGGCGTCCAAGCCAAGG |
NPC1 |
ENSG00000141458 |
0.0525537060123221 |
[] |
[] |
0 |
hSpCas9 |
negative selection |
2891312 |
23573537 |
23573560 |
18 |
- |
27260157 |
SF268 |
viability |
TGTGTTTGGTATGGAGAGTGTGG |
NPC1 |
ENSG00000141458 |
-1.4149271159433 |
[] |
[] |
-8 |
hSpCas9 |
negative selection |
2910003 |
23560314 |
23560337 |
18 |
+ |
27260157 |
SF268 |
viability |
GTCCAAGCCAAGGATCGTCCAGG |
NPC1 |
ENSG00000141458 |
-0.357621487560484 |
[] |
[] |
-3 |
hSpCas9 |
negative selection |
2910401 |
23586330 |
23586353 |
18 |
- |
27260157 |
SF268 |
viability |
GGCCACAGCATGACCGCTCGCGG |
NPC1 |
ENSG00000141458 |
-0.839605276052287 |
[] |
[] |
-6 |
hSpCas9 |
negative selection |
2912237 |
23561421 |
23561444 |
18 |
+ |
27260157 |
SF268 |
viability |
AATCCAGTTGGTGGCATTACAGG |
NPC1 |
ENSG00000141458 |
-0.954416898112504 |
[] |
[] |
-6 |
hSpCas9 |
negative selection |
2913697 |
23556582 |
23556605 |
18 |
+ |
27260157 |
SF268 |
viability |
TGCGCTGACAGGGTCACAGCAGG |
NPC1 |
ENSG00000141458 |
-0.790849638716626 |
[] |
[] |
-6 |
hSpCas9 |
negative selection |
2918858 |
23560280 |
23560303 |
18 |
- |
27260157 |
SF268 |
viability |
CATCATGTGGATCACCTACATGG |
NPC1 |
ENSG00000141458 |
0.621848076552359 |
[] |
[] |
8 |
hSpCas9 |
negative selection |
2922838 |
23586307 |
23586330 |
18 |
+ |
27260157 |
SF268 |
viability |
GCAGGAGGAGGCCAAGGGCCAGG |
NPC1 |
ENSG00000141458 |
1.17581663551633 |
[] |
[] |
9 |
hSpCas9 |
negative selection |
2948106 |
23586317 |
23586340 |
18 |
+ |
27260157 |
SF268 |
viability |
GCCAAGGGCCAGGCCGCGAGCGG |
NPC1 |
ENSG00000141458 |
0.598427852942719 |
[] |
[] |
8 |
hSpCas9 |
negative selection |
2948931 |
23560434 |
23560457 |
18 |
+ |
27260157 |
SF268 |
viability |
GCCTTTGGTGGCATTGTTCATGG |
NPC1 |
ENSG00000141458 |
-0.439120804827881 |
[] |
[] |
-3 |
hSpCas9 |
negative selection |
2948939 |
23556260 |
23556283 |
18 |
+ |
27453484 |
HT29 |
resistance to T3SS1-dependent cytotoxicity |
ATGTCAAGCGGAGGTCCAAAGGG |
NPC1 |
ENSG00000141458 |
0.024769816693846786 |
[2,2] |
[3,1] |
0 |
hSpCas9 |
positive selection |
3006192 |
23556353 |
23556376 |
18 |
- |
27453484 |
HT29 |
resistance to T3SS1-dependent cytotoxicity |
CTTTGGGCCTTTCTTCCGGACGG |
NPC1 |
ENSG00000141458 |
-0.080558905959 |
[5,5] |
[4,3] |
-1 |
hSpCas9 |
positive selection |
3006193 |
23548025 |
23548048 |
18 |
- |
27453484 |
HT29 |
resistance to T3SS1-dependent cytotoxicity |
TGATACAGAGAAGCTCCAGAGGG |
NPC1 |
ENSG00000141458 |
0.1645166886219774 |
[3,3] |
[1,3] |
3 |
hSpCas9 |
positive selection |
3006194 |
23561351 |
23561374 |
18 |
+ |
27453484 |
HT29 |
resistance to T3SS1-dependent cytotoxicity |
TTATACCTACCTGAAAACACAGG |
NPC1 |
ENSG00000141458 |
-0.28397150939492066 |
[4,4] |
[2,2] |
-4 |
hSpCas9 |
positive selection |
3006195 |
23556260 |
23556283 |
18 |
+ |
27453484 |
HT29 |
resistance to T3SS2-dependent cytotoxicity |
ATGTCAAGCGGAGGTCCAAAGGG |
NPC1 |
ENSG00000141458 |
-0.07129815096209843 |
[2,2] |
[0,2] |
-1 |
hSpCas9 |
positive selection |
3074050 |
23556353 |
23556376 |
18 |
- |
27453484 |
HT29 |
resistance to T3SS2-dependent cytotoxicity |
CTTTGGGCCTTTCTTCCGGACGG |
NPC1 |
ENSG00000141458 |
-0.0028644054264818086 |
[5,5] |
[4,3] |
0 |
hSpCas9 |
positive selection |
3074051 |
23548025 |
23548048 |
18 |
- |
27453484 |
HT29 |
resistance to T3SS2-dependent cytotoxicity |
TGATACAGAGAAGCTCCAGAGGG |
NPC1 |
ENSG00000141458 |
0.10781628433830598 |
[3,3] |
[1,2] |
2 |
hSpCas9 |
positive selection |
3074052 |
23561351 |
23561374 |
18 |
+ |
27453484 |
HT29 |
resistance to T3SS2-dependent cytotoxicity |
TTATACCTACCTGAAAACACAGG |
NPC1 |
ENSG00000141458 |
0.3122129332917284 |
[4,4] |
[4,3] |
5 |
hSpCas9 |
positive selection |
3074053 |
23568840 |
23568863 |
|
- |
24336571 |
A375 |
resistance to PLX after 7 days |
AAAGAGTTACAATACTACGTCGG |
NPC1 |
ENSG00000141458 |
-0.14947950935839066 |
[8,10] |
[7,8] |
-5 |
hSpCas9 |
positive selection |
3131294 |
23561444 |
23561467 |
|
+ |
24336571 |
A375 |
resistance to PLX after 7 days |
CGTCAGCGTCCTTCCCACACAGG |
NPC1 |
ENSG00000141458 |
0.3920427260967074 |
[8,10] |
[12,13] |
8 |
hSpCas9 |
positive selection |
3131295 |
23561477 |
23561500 |
|
- |
24336571 |
A375 |
resistance to PLX after 7 days |
GGCCCCCTCAAGTAATGACAAGG |
NPC1 |
ENSG00000141458 |
0.24809085171685386 |
[4,10] |
[9,8] |
7 |
hSpCas9 |
positive selection |
3131296 |
23568921 |
23568944 |
|
+ |
24336571 |
A375 |
resistance to PLX after 7 days |
TTCAAAAACTGACTCTGTCGAGG |
NPC1 |
ENSG00000141458 |
0.2366174989349532 |
[6,6] |
[9,6] |
7 |
hSpCas9 |
positive selection |
3131297 |
23568840 |
23568863 |
|
- |
24336571 |
A375 |
resistance to PLX after 14 days |
AAAGAGTTACAATACTACGTCGG |
NPC1 |
ENSG00000141458 |
-0.1106844545785729 |
[5,8] |
[3,1] |
-1 |
hSpCas9 |
positive selection |
3189087 |
23561444 |
23561467 |
|
+ |
24336571 |
A375 |
resistance to PLX after 14 days |
CGTCAGCGTCCTTCCCACACAGG |
NPC1 |
ENSG00000141458 |
2.109077937936659 |
[11,6] |
[17,21] |
9 |
hSpCas9 |
positive selection |
3189088 |
23561477 |
23561500 |
|
- |
24336571 |
A375 |
resistance to PLX after 14 days |
GGCCCCCTCAAGTAATGACAAGG |
NPC1 |
ENSG00000141458 |
0.44295258721586717 |
[6,9] |
[4,4] |
4 |
hSpCas9 |
positive selection |
3189089 |
23568921 |
23568944 |
|
+ |
24336571 |
A375 |
resistance to PLX after 14 days |
TTCAAAAACTGACTCTGTCGAGG |
NPC1 |
ENSG00000141458 |
0.6289996444019725 |
[4,7] |
[3,4] |
5 |
hSpCas9 |
positive selection |
3189090 |
23568840 |
23568863 |
|
- |
24336571 |
A375 |
viability after 7 days |
AAAGAGTTACAATACTACGTCGG |
NPC1 |
ENSG00000141458 |
-0.6354484612804987 |
[16] |
[8,10] |
-7 |
hSpCas9 |
negative selection |
3246880 |
23561444 |
23561467 |
|
+ |
24336571 |
A375 |
viability after 7 days |
CGTCAGCGTCCTTCCCACACAGG |
NPC1 |
ENSG00000141458 |
0.4335507581760473 |
[7] |
[8,10] |
6 |
hSpCas9 |
negative selection |
3246881 |
23561477 |
23561500 |
|
- |
24336571 |
A375 |
viability after 7 days |
GGCCCCCTCAAGTAATGACAAGG |
NPC1 |
ENSG00000141458 |
-0.9510317107868846 |
[16] |
[4,10] |
-8 |
hSpCas9 |
negative selection |
3246882 |
23568921 |
23568944 |
|
+ |
24336571 |
A375 |
viability after 7 days |
TTCAAAAACTGACTCTGTCGAGG |
NPC1 |
ENSG00000141458 |
0.3842210164454637 |
[5] |
[6,6] |
6 |
hSpCas9 |
negative selection |
3246883 |
23568840 |
23568863 |
|
- |
24336571 |
A375 |
viability after 14 days |
AAAGAGTTACAATACTACGTCGG |
NPC1 |
ENSG00000141458 |
-1.0324271555567779 |
[16] |
[5,8] |
-8 |
hSpCas9 |
negative selection |
3304673 |
23561444 |
23561467 |
|
+ |
24336571 |
A375 |
viability after 14 days |
CGTCAGCGTCCTTCCCACACAGG |
NPC1 |
ENSG00000141458 |
0.37714554381122506 |
[7] |
[11,6] |
5 |
hSpCas9 |
negative selection |
3304674 |
23561477 |
23561500 |
|
- |
24336571 |
A375 |
viability after 14 days |
GGCCCCCTCAAGTAATGACAAGG |
NPC1 |
ENSG00000141458 |
-0.9103204935369608 |
[16] |
[6,9] |
-8 |
hSpCas9 |
negative selection |
3304675 |
23568921 |
23568944 |
|
+ |
24336571 |
A375 |
viability after 14 days |
TTCAAAAACTGACTCTGTCGAGG |
NPC1 |
ENSG00000141458 |
0.22848017158373668 |
[5] |
[4,7] |
3 |
hSpCas9 |
negative selection |
3304676 |
23561477 |
23561500 |
18 |
- |
27383988 |
293T |
resistance to West Nile virus (flavivirus) |
GGCCCCCTCAAGTAATGACAAGG |
NPC1 |
ENSG00000141458 |
0.36250844813789157 |
[118,118] |
[0,0] |
2 |
hSpCas9 |
positive selection |
3382154 |
23557116 |
23557139 |
18 |
- |
27383988 |
293T |
resistance to West Nile virus (flavivirus) |
TCTGTTAATGCAAGTGACAAAGG |
NPC1 |
ENSG00000141458 |
-0.8822251409529586 |
[281,281] |
[0,0] |
-6 |
hSpCas9 |
positive selection |
3382155 |
23568921 |
23568944 |
18 |
+ |
27383988 |
293T |
resistance to West Nile virus (flavivirus) |
TTCAAAAACTGACTCTGTCGAGG |
NPC1 |
ENSG00000141458 |
1.1912370209880627 |
[66,66] |
[0,0] |
5 |
hSpCas9 |
positive selection |
3382156 |
23556259 |
23556282 |
18 |
+ |
26780180 |
HT29 |
viability (Avana library 4 designs) |
ATGTCAAGCGGAGGTCCAAAGGG |
NPC1 |
ENSG00000141458 |
1.86569502702283 |
[] |
[] |
7 |
hSpCas9 |
negative selection |
3444050 |
23556353 |
23556376 |
18 |
- |
26780180 |
HT29 |
viability (Avana library 4 designs) |
CTTTGGGCCTTTCTTCCGGACGG |
NPC1 |
ENSG00000141458 |
0.271577082789369 |
[] |
[] |
0 |
hSpCas9 |
negative selection |
3444051 |
23548025 |
23548048 |
18 |
- |
26780180 |
HT29 |
viability (Avana library 4 designs) |
TGATACAGAGAAGCTCCAGAGGG |
NPC1 |
ENSG00000141458 |
3.66892060911996 |
[] |
[] |
9 |
hSpCas9 |
negative selection |
3444052 |
23561350 |
23561373 |
18 |
+ |
26780180 |
HT29 |
viability (Avana library 4 designs) |
TTATACCTACCTGAAAACACAGG |
NPC1 |
ENSG00000141458 |
1.48122902933371 |
[] |
[] |
6 |
hSpCas9 |
negative selection |
3444053 |
23548025 |
23548048 |
18 |
- |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
TGATACAGAGAAGCTCCAGAGGG |
NPC1 |
ENSG00000141458 |
-12.2639034189083 |
[] |
[] |
-8 |
hSpCas9 |
negative selection |
3536044 |
23556353 |
23556376 |
18 |
- |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
CTTTGGGCCTTTCTTCCGGACGG |
NPC1 |
ENSG00000141458 |
4.38802766108122 |
[] |
[] |
7 |
hSpCas9 |
negative selection |
3536045 |
23556259 |
23556282 |
18 |
+ |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
ATGTCAAGCGGAGGTCCAAAGGG |
NPC1 |
ENSG00000141458 |
5.03884569501992 |
[] |
[] |
8 |
hSpCas9 |
negative selection |
3536046 |
23561350 |
23561373 |
18 |
+ |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
TTATACCTACCTGAAAACACAGG |
NPC1 |
ENSG00000141458 |
-14.9225945786589 |
[] |
[] |
-9 |
hSpCas9 |
negative selection |
3536047 |
23545017 |
23545040 |
18 |
+ |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
GATGGCATAGCTAATTACAACGG |
NPC1 |
ENSG00000141458 |
-6.95281900560264 |
[] |
[] |
-6 |
hSpCas9 |
negative selection |
3536048 |
23548062 |
23548085 |
18 |
+ |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
GACAGGGAAGGTAATCACAAGGG |
NPC1 |
ENSG00000141458 |
-1.64376499209949 |
[] |
[] |
-2 |
hSpCas9 |
negative selection |
3536049 |
23548025 |
23548048 |
18 |
- |
26780180 |
A375 |
viability (Avana lentiGuide) |
TGATACAGAGAAGCTCCAGAGGG |
NPC1 |
ENSG00000141458 |
10.5346275181647 |
[] |
[] |
7 |
hSpCas9 |
negative selection |
3644703 |
23556353 |
23556376 |
18 |
- |
26780180 |
A375 |
viability (Avana lentiGuide) |
CTTTGGGCCTTTCTTCCGGACGG |
NPC1 |
ENSG00000141458 |
5.46714800819428 |
[] |
[] |
5 |
hSpCas9 |
negative selection |
3644704 |
23556259 |
23556282 |
18 |
+ |
26780180 |
A375 |
viability (Avana lentiGuide) |
ATGTCAAGCGGAGGTCCAAAGGG |
NPC1 |
ENSG00000141458 |
0.21896326116377 |
[] |
[] |
0 |
hSpCas9 |
negative selection |
3644705 |
23561350 |
23561373 |
18 |
+ |
26780180 |
A375 |
viability (Avana lentiGuide) |
TTATACCTACCTGAAAACACAGG |
NPC1 |
ENSG00000141458 |
13.3068514231213 |
[] |
[] |
7 |
hSpCas9 |
negative selection |
3644706 |
23545017 |
23545040 |
18 |
+ |
26780180 |
A375 |
viability (Avana lentiGuide) |
GATGGCATAGCTAATTACAACGG |
NPC1 |
ENSG00000141458 |
13.8606873458687 |
[] |
[] |
7 |
hSpCas9 |
negative selection |
3644707 |
23548062 |
23548085 |
18 |
+ |
26780180 |
A375 |
viability (Avana lentiGuide) |
GACAGGGAAGGTAATCACAAGGG |
NPC1 |
ENSG00000141458 |
13.0734493823645 |
[] |
[] |
7 |
hSpCas9 |
negative selection |
3644708 |
23548025 |
23548048 |
18 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
TGATACAGAGAAGCTCCAGAGGG |
NPC1 |
ENSG00000141458 |
-0.3791393595148418 |
[5] |
[3,3] |
-5 |
hSpCas9 |
positive selection |
3753362 |
23556353 |
23556376 |
18 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
CTTTGGGCCTTTCTTCCGGACGG |
NPC1 |
ENSG00000141458 |
0.15515914925258217 |
[6] |
[6,6] |
4 |
hSpCas9 |
positive selection |
3753363 |
23556259 |
23556282 |
18 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
ATGTCAAGCGGAGGTCCAAAGGG |
NPC1 |
ENSG00000141458 |
0.20678692274755256 |
[4] |
[5,4] |
6 |
hSpCas9 |
positive selection |
3753364 |
23561350 |
23561373 |
18 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
TTATACCTACCTGAAAACACAGG |
NPC1 |
ENSG00000141458 |
-0.8401336744530747 |
[6] |
[3,3] |
-8 |
hSpCas9 |
positive selection |
3753365 |
23545017 |
23545040 |
18 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
GATGGCATAGCTAATTACAACGG |
NPC1 |
ENSG00000141458 |
-0.26008775431725956 |
[5] |
[4,4] |
-4 |
hSpCas9 |
positive selection |
3753366 |
23548062 |
23548085 |
18 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
GACAGGGAAGGTAATCACAAGGG |
NPC1 |
ENSG00000141458 |
-0.08784106286979573 |
[4] |
[3,3] |
-1 |
hSpCas9 |
positive selection |
3753367 |
23548025 |
23548048 |
18 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
TGATACAGAGAAGCTCCAGAGGG |
NPC1 |
ENSG00000141458 |
0.21026846600407953 |
[5] |
[5,4] |
5 |
hSpCas9 |
positive selection |
3861969 |
23556353 |
23556376 |
18 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
CTTTGGGCCTTTCTTCCGGACGG |
NPC1 |
ENSG00000141458 |
-0.042979962823731455 |
[7] |
[7,4] |
0 |
hSpCas9 |
positive selection |
3861970 |
23556259 |
23556282 |
18 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
ATGTCAAGCGGAGGTCCAAAGGG |
NPC1 |
ENSG00000141458 |
-0.3043550627200927 |
[4] |
[3,2] |
-4 |
hSpCas9 |
positive selection |
3861971 |
23561350 |
23561373 |
18 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
TTATACCTACCTGAAAACACAGG |
NPC1 |
ENSG00000141458 |
0.12410689611483669 |
[6] |
[6,5] |
3 |
hSpCas9 |
positive selection |
3861972 |
23545017 |
23545040 |
18 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
GATGGCATAGCTAATTACAACGG |
NPC1 |
ENSG00000141458 |
-0.22003783206231653 |
[5] |
[2,4] |
-3 |
hSpCas9 |
positive selection |
3861973 |
23548062 |
23548085 |
18 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
GACAGGGAAGGTAATCACAAGGG |
NPC1 |
ENSG00000141458 |
-0.5203813909454382 |
[4] |
[2,2] |
-6 |
hSpCas9 |
positive selection |
3861974 |
23557139 |
23557162 |
18 |
+ |
26780180 |
A375 |
viability |
AAAAGCTATATTGCTATCGATGG |
NPC1 |
ENSG00000141458 |
1.13867631383757 |
[] |
[] |
6 |
hSpCas9 |
negative selection |
3973289 |
23568840 |
23568863 |
18 |
- |
26780180 |
A375 |
viability |
AAAGAGTTACAATACTACGTCGG |
NPC1 |
ENSG00000141458 |
1.57318265148535 |
[] |
[] |
8 |
hSpCas9 |
negative selection |
3973290 |
23561444 |
23561467 |
18 |
+ |
26780180 |
A375 |
viability |
CGTCAGCGTCCTTCCCACACAGG |
NPC1 |
ENSG00000141458 |
0.37789237911763 |
[] |
[] |
0 |
hSpCas9 |
negative selection |
3973291 |
23561477 |
23561500 |
18 |
- |
26780180 |
A375 |
viability |
GGCCCCCTCAAGTAATGACAAGG |
NPC1 |
ENSG00000141458 |
1.20001899476748 |
[] |
[] |
6 |
hSpCas9 |
negative selection |
3973292 |
23557116 |
23557139 |
18 |
- |
26780180 |
A375 |
viability |
TCTGTTAATGCAAGTGACAAAGG |
NPC1 |
ENSG00000141458 |
1.38597278630473 |
[] |
[] |
7 |
hSpCas9 |
negative selection |
3973293 |
23568921 |
23568944 |
18 |
+ |
26780180 |
A375 |
viability |
TTCAAAAACTGACTCTGTCGAGG |
NPC1 |
ENSG00000141458 |
0.992287610353014 |
[] |
[] |
4 |
hSpCas9 |
negative selection |
3973294 |
23557139 |
23557162 |
18 |
+ |
26780180 |
HT29 |
viability (GeCKOv2 library) |
AAAAGCTATATTGCTATCGATGG |
NPC1 |
ENSG00000141458 |
1.06165467152086 |
[] |
[] |
5 |
hSpCas9 |
negative selection |
4081255 |
23568840 |
23568863 |
18 |
- |
26780180 |
HT29 |
viability (GeCKOv2 library) |
AAAGAGTTACAATACTACGTCGG |
NPC1 |
ENSG00000141458 |
2.02625572921723 |
[] |
[] |
9 |
hSpCas9 |
negative selection |
4081256 |
23561444 |
23561467 |
18 |
+ |
26780180 |
HT29 |
viability (GeCKOv2 library) |
CGTCAGCGTCCTTCCCACACAGG |
NPC1 |
ENSG00000141458 |
0.364228893907742 |
[] |
[] |
1 |
hSpCas9 |
negative selection |
4081257 |
23561477 |
23561500 |
18 |
- |
26780180 |
HT29 |
viability (GeCKOv2 library) |
GGCCCCCTCAAGTAATGACAAGG |
NPC1 |
ENSG00000141458 |
1.31735691889409 |
[] |
[] |
6 |
hSpCas9 |
negative selection |
4081258 |
23557116 |
23557139 |
18 |
- |
26780180 |
HT29 |
viability (GeCKOv2 library) |
TCTGTTAATGCAAGTGACAAAGG |
NPC1 |
ENSG00000141458 |
0.917680656345916 |
[] |
[] |
4 |
hSpCas9 |
negative selection |
4081259 |
23568921 |
23568944 |
18 |
+ |
26780180 |
HT29 |
viability (GeCKOv2 library) |
TTCAAAAACTGACTCTGTCGAGG |
NPC1 |
ENSG00000141458 |
1.34667681032331 |
[] |
[] |
6 |
hSpCas9 |
negative selection |
4081260 |
23568840 |
23568863 |
18 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiCRISPRv1) |
AAAGAGTTACAATACTACGTCGG |
NPC1 |
ENSG00000141458 |
-0.18099062414671063 |
[2] |
[1,1] |
-4 |
hSpCas9 |
positive selection |
4155988 |
23561444 |
23561467 |
18 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiCRISPRv1) |
CGTCAGCGTCCTTCCCACACAGG |
NPC1 |
ENSG00000141458 |
0.5062735473357376 |
[2] |
[1,4] |
9 |
hSpCas9 |
positive selection |
4155989 |
23561477 |
23561500 |
18 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiCRISPRv1) |
GGCCCCCTCAAGTAATGACAAGG |
NPC1 |
ENSG00000141458 |
0.24460307644738374 |
[2] |
[2,2] |
6 |
hSpCas9 |
positive selection |
4155990 |
23568921 |
23568944 |
18 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiCRISPRv1) |
TTCAAAAACTGACTCTGTCGAGG |
NPC1 |
ENSG00000141458 |
0.1490942569884003 |
[2] |
[1,1] |
4 |
hSpCas9 |
positive selection |
4155991 |
23515929 |
23515952 |
18 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiCRISPRv1) |
CAGCAAGATCACGGCGCTCTCGG |
NPC1 |
ENSG00000141458 |
0.1386669818451709 |
[3] |
[2,3] |
3 |
hSpCas9 |
positive selection |
4186255 |
23515939 |
23515962 |
18 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiCRISPRv1) |
CGTGATCTTGCTGTCTACCACGG |
NPC1 |
ENSG00000141458 |
0.20285364626561644 |
[3] |
[2,2] |
5 |
hSpCas9 |
positive selection |
4186257 |
23568840 |
23568863 |
18 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiGuide) |
AAAGAGTTACAATACTACGTCGG |
NPC1 |
ENSG00000141458 |
0.02751746171521427 |
[3] |
[1,1,0,0] |
0 |
hSpCas9 |
positive selection |
4220010 |
23561444 |
23561467 |
18 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiGuide) |
CGTCAGCGTCCTTCCCACACAGG |
NPC1 |
ENSG00000141458 |
0.6634543879115664 |
[1] |
[0,0,1,0] |
4 |
hSpCas9 |
positive selection |
4220011 |
23561477 |
23561500 |
18 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiGuide) |
GGCCCCCTCAAGTAATGACAAGG |
NPC1 |
ENSG00000141458 |
-0.2407310746021174 |
[4] |
[0,0,4,0] |
-4 |
hSpCas9 |
positive selection |
4220012 |
23568921 |
23568944 |
18 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiGuide) |
TTCAAAAACTGACTCTGTCGAGG |
NPC1 |
ENSG00000141458 |
-0.03647976736259051 |
[1] |
[0,0,0,0] |
0 |
hSpCas9 |
positive selection |
4220013 |
23515929 |
23515952 |
18 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiGuide) |
CAGCAAGATCACGGCGCTCTCGG |
NPC1 |
ENSG00000141458 |
-0.5573668052435661 |
[3] |
[0,1,0,0] |
-7 |
hSpCas9 |
positive selection |
4250277 |
23515939 |
23515962 |
18 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiGuide) |
CGTGATCTTGCTGTCTACCACGG |
NPC1 |
ENSG00000141458 |
-0.4338630922570436 |
[4] |
[0,3,1,0] |
-6 |
hSpCas9 |
positive selection |
4250279 |
23515929 |
23515952 |
18 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
CAGCAAGATCACGGCGCTCTCGG |
NPC1 |
ENSG00000141458 |
-0.07700565045427693 |
[3] |
[3,1] |
-1 |
hSpCas9 |
positive selection |
4259325 |
23516394 |
23516417 |
18 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
TTCCGAAAGAGACATCGCAATGG |
NPC1 |
ENSG00000141458 |
-0.13952877558788646 |
[1] |
[1,0] |
-3 |
hSpCas9 |
positive selection |
4259326 |
23515862 |
23515885 |
18 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
AGTTTCAGACTCCGTTTCTCTGG |
NPC1 |
ENSG00000141458 |
0.041972735495611924 |
[3] |
[3,1] |
0 |
hSpCas9 |
positive selection |
4259327 |
23557139 |
23557162 |
18 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
AAAAGCTATATTGCTATCGATGG |
NPC1 |
ENSG00000141458 |
0.276183297555074 |
[3] |
[3,3] |
5 |
hSpCas9 |
positive selection |
4286073 |
23568840 |
23568863 |
18 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
AAAGAGTTACAATACTACGTCGG |
NPC1 |
ENSG00000141458 |
-0.1683796010387704 |
[2] |
[0,2] |
-3 |
hSpCas9 |
positive selection |
4286074 |
23561444 |
23561467 |
18 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
CGTCAGCGTCCTTCCCACACAGG |
NPC1 |
ENSG00000141458 |
0.35826481432506574 |
[0] |
[1,0] |
7 |
hSpCas9 |
positive selection |
4286075 |
23516396 |
23516419 |
18 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
AGCCATTGCGATGTCTCTTTCGG |
NPC1 |
ENSG00000141458 |
0.5434689479136765 |
[3] |
[4,4] |
9 |
hSpCas9 |
positive selection |
4323607 |
23561477 |
23561500 |
18 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
GGCCCCCTCAAGTAATGACAAGG |
NPC1 |
ENSG00000141458 |
-0.26911653255742596 |
[2] |
[2,0] |
-5 |
hSpCas9 |
positive selection |
4350330 |
23557116 |
23557139 |
18 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
TCTGTTAATGCAAGTGACAAAGG |
NPC1 |
ENSG00000141458 |
0.5072535176905185 |
[3] |
[3,4] |
9 |
hSpCas9 |
positive selection |
4350331 |
23568921 |
23568944 |
18 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
TTCAAAAACTGACTCTGTCGAGG |
NPC1 |
ENSG00000141458 |
0.3276961198796663 |
[2] |
[3,0] |
6 |
hSpCas9 |
positive selection |
4350332 |
23551667 |
23551689 |
18 |
+ |
27760321 |
OCIAML3 |
viability |
ACCAAACGTACCCAGACAAGGG |
NPC1 |
ENSG00000141458 |
0.30533486730127657 |
[444,352] |
[275,522] |
3 |
hSpCas9 |
negative selection |
4423116 |
23554879 |
23554901 |
18 |
+ |
27760321 |
OCIAML3 |
viability |
TCGTGTTATACGGTGAAAGAGG |
NPC1 |
ENSG00000141458 |
0.6530288721745925 |
[97,83] |
[88,140] |
7 |
hSpCas9 |
negative selection |
4423117 |
23556279 |
23556301 |
18 |
+ |
27760321 |
OCIAML3 |
viability |
GGGTACATCAGCTCCCGAAGGG |
NPC1 |
ENSG00000141458 |
0.3483252332042404 |
[563,525] |
[373,762] |
4 |
hSpCas9 |
negative selection |
4423118 |
23556464 |
23556486 |
18 |
- |
27760321 |
OCIAML3 |
viability |
ACTGCGTGTTCGTCAGGCCTGG |
NPC1 |
ENSG00000141458 |
0.25633243926251614 |
[1061,926] |
[912,944] |
3 |
hSpCas9 |
negative selection |
4423119 |
23556541 |
23556563 |
18 |
- |
27760321 |
OCIAML3 |
viability |
GGCGGCTGTTCACACGCTGGGG |
NPC1 |
ENSG00000141458 |
-0.0020798364446141804 |
[1376,1169] |
[886,1126] |
0 |
hSpCas9 |
negative selection |
4423120 |
23551667 |
23551689 |
18 |
+ |
27760321 |
OCIAML2 |
viability |
ACCAAACGTACCCAGACAAGGG |
NPC1 |
ENSG00000141458 |
-0.14694258496375753 |
[444,352] |
[205,399] |
-2 |
hSpCas9 |
negative selection |
4506579 |
23554879 |
23554901 |
18 |
+ |
27760321 |
OCIAML2 |
viability |
TCGTGTTATACGGTGAAAGAGG |
NPC1 |
ENSG00000141458 |
0.38821143518529766 |
[97,83] |
[108,78] |
5 |
hSpCas9 |
negative selection |
4506580 |
23556279 |
23556301 |
18 |
+ |
27760321 |
OCIAML2 |
viability |
GGGTACATCAGCTCCCGAAGGG |
NPC1 |
ENSG00000141458 |
0.35356959100169644 |
[563,525] |
[522,616] |
5 |
hSpCas9 |
negative selection |
4506581 |
23556464 |
23556486 |
18 |
- |
27760321 |
OCIAML2 |
viability |
ACTGCGTGTTCGTCAGGCCTGG |
NPC1 |
ENSG00000141458 |
0.16505898857340262 |
[1061,926] |
[779,1057] |
2 |
hSpCas9 |
negative selection |
4506582 |
23556541 |
23556563 |
18 |
- |
27760321 |
OCIAML2 |
viability |
GGCGGCTGTTCACACGCTGGGG |
NPC1 |
ENSG00000141458 |
0.13223236880035394 |
[1376,1169] |
[959,1342] |
1 |
hSpCas9 |
negative selection |
4506583 |
23551667 |
23551689 |
18 |
+ |
27760321 |
MV411 |
viability |
ACCAAACGTACCCAGACAAGGG |
NPC1 |
ENSG00000141458 |
-0.10966898377219372 |
[444,352] |
[144,388] |
-1 |
hSpCas9 |
negative selection |
4590042 |
23554879 |
23554901 |
18 |
+ |
27760321 |
MV411 |
viability |
TCGTGTTATACGGTGAAAGAGG |
NPC1 |
ENSG00000141458 |
0.8365438682417841 |
[97,83] |
[0,265] |
6 |
hSpCas9 |
negative selection |
4590043 |
23556279 |
23556301 |
18 |
+ |
27760321 |
MV411 |
viability |
GGGTACATCAGCTCCCGAAGGG |
NPC1 |
ENSG00000141458 |
-1.0817223623915613 |
[563,525] |
[159,184] |
-6 |
hSpCas9 |
negative selection |
4590044 |
23556464 |
23556486 |
18 |
- |
27760321 |
MV411 |
viability |
ACTGCGTGTTCGTCAGGCCTGG |
NPC1 |
ENSG00000141458 |
1.3518485361652888 |
[1061,926] |
[1705,1618] |
8 |
hSpCas9 |
negative selection |
4590045 |
23556541 |
23556563 |
18 |
- |
27760321 |
MV411 |
viability |
GGCGGCTGTTCACACGCTGGGG |
NPC1 |
ENSG00000141458 |
0.398705697317421 |
[1376,1169] |
[797,1563] |
3 |
hSpCas9 |
negative selection |
4590046 |
23551667 |
23551689 |
18 |
+ |
27760321 |
HL60 |
viability |
ACCAAACGTACCCAGACAAGGG |
NPC1 |
ENSG00000141458 |
-0.02674346546674075 |
[444,352] |
[316,318] |
0 |
hSpCas9 |
negative selection |
4673505 |
23554879 |
23554901 |
18 |
+ |
27760321 |
HL60 |
viability |
TCGTGTTATACGGTGAAAGAGG |
NPC1 |
ENSG00000141458 |
0.7218977695616695 |
[97,83] |
[129,113] |
8 |
hSpCas9 |
negative selection |
4673506 |
23556279 |
23556301 |
18 |
+ |
27760321 |
HL60 |
viability |
GGGTACATCAGCTCCCGAAGGG |
NPC1 |
ENSG00000141458 |
0.5524974622491612 |
[563,525] |
[709,592] |
6 |
hSpCas9 |
negative selection |
4673507 |
23556464 |
23556486 |
18 |
- |
27760321 |
HL60 |
viability |
ACTGCGTGTTCGTCAGGCCTGG |
NPC1 |
ENSG00000141458 |
0.10195514616438306 |
[1061,926] |
[782,961] |
1 |
hSpCas9 |
negative selection |
4673508 |
23556541 |
23556563 |
18 |
- |
27760321 |
HL60 |
viability |
GGCGGCTGTTCACACGCTGGGG |
NPC1 |
ENSG00000141458 |
0.0016296930265846665 |
[1376,1169] |
[1035,1039] |
0 |
hSpCas9 |
negative selection |
4673509 |
23551667 |
23551689 |
18 |
+ |
27760321 |
HT1080 |
viability |
ACCAAACGTACCCAGACAAGGG |
NPC1 |
ENSG00000141458 |
-0.058019298643243455 |
[352,275] |
[127,111] |
0 |
hSpCas9 |
negative selection |
4756968 |
23554879 |
23554901 |
18 |
+ |
27760321 |
HT1080 |
viability |
TCGTGTTATACGGTGAAAGAGG |
NPC1 |
ENSG00000141458 |
0.30526921320156797 |
[83,65] |
[24,49] |
1 |
hSpCas9 |
negative selection |
4756969 |
23556279 |
23556301 |
18 |
+ |
27760321 |
HT1080 |
viability |
GGGTACATCAGCTCCCGAAGGG |
NPC1 |
ENSG00000141458 |
1.9072707264108906 |
[525,410] |
[923,454] |
8 |
hSpCas9 |
negative selection |
4756970 |
23556464 |
23556486 |
18 |
- |
27760321 |
HT1080 |
viability |
ACTGCGTGTTCGTCAGGCCTGG |
NPC1 |
ENSG00000141458 |
1.0275920034321127 |
[926,723] |
[900,417] |
5 |
hSpCas9 |
negative selection |
4756971 |
23556541 |
23556563 |
18 |
- |
27760321 |
HT1080 |
viability |
GGCGGCTGTTCACACGCTGGGG |
NPC1 |
ENSG00000141458 |
0.2400833410606158 |
[1169,912] |
[637,327] |
1 |
hSpCas9 |
negative selection |
4756972 |
23551667 |
23551689 |
18 |
+ |
27760321 |
HT29 |
viability after 7 days |
ACCAAACGTACCCAGACAAGGG |
NPC1 |
ENSG00000141458 |
0.2745685839769554 |
[352,275] |
[663,282,542] |
4 |
hSpCas9 |
negative selection |
4840431 |
23554879 |
23554901 |
18 |
+ |
27760321 |
HT29 |
viability after 7 days |
TCGTGTTATACGGTGAAAGAGG |
NPC1 |
ENSG00000141458 |
-0.3275029617740346 |
[83,65] |
[52,29,141] |
-5 |
hSpCas9 |
negative selection |
4840432 |
23556279 |
23556301 |
18 |
+ |
27760321 |
HT29 |
viability after 7 days |
GGGTACATCAGCTCCCGAAGGG |
NPC1 |
ENSG00000141458 |
0.12761073446900023 |
[525,410] |
[567,653,735] |
2 |
hSpCas9 |
negative selection |
4840433 |
23556464 |
23556486 |
18 |
- |
27760321 |
HT29 |
viability after 7 days |
ACTGCGTGTTCGTCAGGCCTGG |
NPC1 |
ENSG00000141458 |
0.3772398908395105 |
[926,723] |
[1531,1095,1522] |
6 |
hSpCas9 |
negative selection |
4840434 |
23556541 |
23556563 |
18 |
- |
27760321 |
HT29 |
viability after 7 days |
GGCGGCTGTTCACACGCTGGGG |
NPC1 |
ENSG00000141458 |
0.2640142636422669 |
[1169,912] |
[1687,1442,1698] |
4 |
hSpCas9 |
negative selection |
4840435 |
23551667 |
23551689 |
18 |
+ |
27760321 |
HT29 |
viability after 25 days |
ACCAAACGTACCCAGACAAGGG |
NPC1 |
ENSG00000141458 |
-0.383920472982859 |
[352,275] |
[154,321,365] |
-4 |
hSpCas9 |
negative selection |
4923894 |
23554879 |
23554901 |
18 |
+ |
27760321 |
HT29 |
viability after 25 days |
TCGTGTTATACGGTGAAAGAGG |
NPC1 |
ENSG00000141458 |
-0.9533104144424511 |
[83,65] |
[46,37,47] |
-6 |
hSpCas9 |
negative selection |
4923895 |
23556279 |
23556301 |
18 |
+ |
27760321 |
HT29 |
viability after 25 days |
GGGTACATCAGCTCCCGAAGGG |
NPC1 |
ENSG00000141458 |
-0.5986153447053325 |
[525,410] |
[320,381,359] |
-5 |
hSpCas9 |
negative selection |
4923896 |
23556464 |
23556486 |
18 |
- |
27760321 |
HT29 |
viability after 25 days |
ACTGCGTGTTCGTCAGGCCTGG |
NPC1 |
ENSG00000141458 |
0.36042112515108893 |
[926,723] |
[1168,1024,1466] |
4 |
hSpCas9 |
negative selection |
4923897 |
23556541 |
23556563 |
18 |
- |
27760321 |
HT29 |
viability after 25 days |
GGCGGCTGTTCACACGCTGGGG |
NPC1 |
ENSG00000141458 |
-0.5640622519590761 |
[1169,912] |
[795,714,914] |
-5 |
hSpCas9 |
negative selection |
4923898 |
23551667 |
23551689 |
18 |
+ |
27760321 |
HT29 |
viability after 22 days |
ACCAAACGTACCCAGACAAGGG |
NPC1 |
ENSG00000141458 |
-0.4779407260913027 |
[352,275] |
[224,318,239] |
-4 |
hSpCas9 |
negative selection |
5007357 |
23554879 |
23554901 |
18 |
+ |
27760321 |
HT29 |
viability after 22 days |
TCGTGTTATACGGTGAAAGAGG |
NPC1 |
ENSG00000141458 |
-1.485282474254582 |
[83,65] |
[30,24,36] |
-7 |
hSpCas9 |
negative selection |
5007358 |
23556279 |
23556301 |
18 |
+ |
27760321 |
HT29 |
viability after 22 days |
GGGTACATCAGCTCCCGAAGGG |
NPC1 |
ENSG00000141458 |
-0.3884676481194218 |
[525,410] |
[380,366,494] |
-4 |
hSpCas9 |
negative selection |
5007359 |
23556464 |
23556486 |
18 |
- |
27760321 |
HT29 |
viability after 22 days |
ACTGCGTGTTCGTCAGGCCTGG |
NPC1 |
ENSG00000141458 |
0.45564198766364306 |
[926,723] |
[1333,1039,1553] |
5 |
hSpCas9 |
negative selection |
5007360 |
23556541 |
23556563 |
18 |
- |
27760321 |
HT29 |
viability after 22 days |
GGCGGCTGTTCACACGCTGGGG |
NPC1 |
ENSG00000141458 |
-0.34431583183042713 |
[1169,912] |
[942,1083,816] |
-3 |
hSpCas9 |
negative selection |
5007361 |
23551667 |
23551689 |
18 |
+ |
27760321 |
HT29 |
viability after 19 days |
ACCAAACGTACCCAGACAAGGG |
NPC1 |
ENSG00000141458 |
-0.6026419315117073 |
[352,275] |
[220,334,155] |
-5 |
hSpCas9 |
negative selection |
5090820 |
23554879 |
23554901 |
18 |
+ |
27760321 |
HT29 |
viability after 19 days |
TCGTGTTATACGGTGAAAGAGG |
NPC1 |
ENSG00000141458 |
-1.6961794429991262 |
[83,65] |
[41,37,1] |
-7 |
hSpCas9 |
negative selection |
5090821 |
23556279 |
23556301 |
18 |
+ |
27760321 |
HT29 |
viability after 19 days |
GGGTACATCAGCTCCCGAAGGG |
NPC1 |
ENSG00000141458 |
0.3213306208916777 |
[525,410] |
[489,980,523] |
3 |
hSpCas9 |
negative selection |
5090822 |
23556464 |
23556486 |
18 |
- |
27760321 |
HT29 |
viability after 19 days |
ACTGCGTGTTCGTCAGGCCTGG |
NPC1 |
ENSG00000141458 |
0.3212781545313341 |
[926,723] |
[1264,992,1284] |
3 |
hSpCas9 |
negative selection |
5090823 |
23556541 |
23556563 |
18 |
- |
27760321 |
HT29 |
viability after 19 days |
GGCGGCTGTTCACACGCTGGGG |
NPC1 |
ENSG00000141458 |
-0.4205855688369997 |
[1169,912] |
[664,886,1085] |
-4 |
hSpCas9 |
negative selection |
5090824 |
23551667 |
23551689 |
18 |
+ |
27760321 |
HT29 |
viability after 16 days |
ACCAAACGTACCCAGACAAGGG |
NPC1 |
ENSG00000141458 |
0.3889331717931443 |
[352,275] |
[477,342,565] |
4 |
hSpCas9 |
negative selection |
5174283 |
23554879 |
23554901 |
18 |
+ |
27760321 |
HT29 |
viability after 16 days |
TCGTGTTATACGGTGAAAGAGG |
NPC1 |
ENSG00000141458 |
0.12944077653827257 |
[83,65] |
[212,49,24] |
1 |
hSpCas9 |
negative selection |
5174284 |
23556279 |
23556301 |
18 |
+ |
27760321 |
HT29 |
viability after 16 days |
GGGTACATCAGCTCCCGAAGGG |
NPC1 |
ENSG00000141458 |
0.23033989262170534 |
[525,410] |
[986,456,439] |
2 |
hSpCas9 |
negative selection |
5174285 |
23556464 |
23556486 |
18 |
- |
27760321 |
HT29 |
viability after 16 days |
ACTGCGTGTTCGTCAGGCCTGG |
NPC1 |
ENSG00000141458 |
0.4898846050201071 |
[926,723] |
[1810,1163,967] |
5 |
hSpCas9 |
negative selection |
5174286 |
23556541 |
23556563 |
18 |
- |
27760321 |
HT29 |
viability after 16 days |
GGCGGCTGTTCACACGCTGGGG |
NPC1 |
ENSG00000141458 |
-0.12020043973146466 |
[1169,912] |
[1389,883,976] |
-1 |
hSpCas9 |
negative selection |
5174287 |
23551667 |
23551689 |
18 |
+ |
27760321 |
HT29 |
viability after 13 days |
ACCAAACGTACCCAGACAAGGG |
NPC1 |
ENSG00000141458 |
-0.10005135576648322 |
[352,275] |
[338,285,392] |
-1 |
hSpCas9 |
negative selection |
5257746 |
23554879 |
23554901 |
18 |
+ |
27760321 |
HT29 |
viability after 13 days |
TCGTGTTATACGGTGAAAGAGG |
NPC1 |
ENSG00000141458 |
-0.6346605134497945 |
[83,65] |
[4,67,92] |
-6 |
hSpCas9 |
negative selection |
5257747 |
23556279 |
23556301 |
18 |
+ |
27760321 |
HT29 |
viability after 13 days |
GGGTACATCAGCTCCCGAAGGG |
NPC1 |
ENSG00000141458 |
-0.3120391352563492 |
[525,410] |
[379,707,237] |
-4 |
hSpCas9 |
negative selection |
5257748 |
23556464 |
23556486 |
18 |
- |
27760321 |
HT29 |
viability after 13 days |
ACTGCGTGTTCGTCAGGCCTGG |
NPC1 |
ENSG00000141458 |
0.2225456324948054 |
[926,723] |
[890,906,1528] |
2 |
hSpCas9 |
negative selection |
5257749 |
23556541 |
23556563 |
18 |
- |
27760321 |
HT29 |
viability after 13 days |
GGCGGCTGTTCACACGCTGGGG |
NPC1 |
ENSG00000141458 |
-0.4543240054062019 |
[1169,912] |
[591,813,1218] |
-5 |
hSpCas9 |
negative selection |
5257750 |
23551667 |
23551689 |
18 |
+ |
27760321 |
HT29 |
viability after 10 days |
ACCAAACGTACCCAGACAAGGG |
NPC1 |
ENSG00000141458 |
0.25849949049470333 |
[352,275] |
[411,730,277] |
3 |
hSpCas9 |
negative selection |
5341209 |
23554879 |
23554901 |
18 |
+ |
27760321 |
HT29 |
viability after 10 days |
TCGTGTTATACGGTGAAAGAGG |
NPC1 |
ENSG00000141458 |
-0.9379649332526165 |
[83,65] |
[17,68,59] |
-7 |
hSpCas9 |
negative selection |
5341210 |
23556279 |
23556301 |
18 |
+ |
27760321 |
HT29 |
viability after 10 days |
GGGTACATCAGCTCCCGAAGGG |
NPC1 |
ENSG00000141458 |
-0.209678113498827 |
[525,410] |
[617,525,376] |
-3 |
hSpCas9 |
negative selection |
5341211 |
23556464 |
23556486 |
18 |
- |
27760321 |
HT29 |
viability after 10 days |
ACTGCGTGTTCGTCAGGCCTGG |
NPC1 |
ENSG00000141458 |
0.2916687671096996 |
[926,723] |
[1414,1096,1267] |
4 |
hSpCas9 |
negative selection |
5341212 |
23556541 |
23556563 |
18 |
- |
27760321 |
HT29 |
viability after 10 days |
GGCGGCTGTTCACACGCTGGGG |
NPC1 |
ENSG00000141458 |
0.1347491732473265 |
[1169,912] |
[1161,1390,1721] |
1 |
hSpCas9 |
negative selection |
5341213 |
23551667 |
23551689 |
18 |
+ |
27760321 |
MOLM13 |
viability |
ACCAAACGTACCCAGACAAGGG |
NPC1 |
ENSG00000141458 |
-0.1379491191003638 |
[444,352] |
[198,206] |
-1 |
hSpCas9 |
negative selection |
5424672 |
23554879 |
23554901 |
18 |
+ |
27760321 |
MOLM13 |
viability |
TCGTGTTATACGGTGAAAGAGG |
NPC1 |
ENSG00000141458 |
-5.13187111197462 |
[97,83] |
[1,0] |
-9 |
hSpCas9 |
negative selection |
5424673 |
23556279 |
23556301 |
18 |
+ |
27760321 |
MOLM13 |
viability |
GGGTACATCAGCTCCCGAAGGG |
NPC1 |
ENSG00000141458 |
-0.3933962716933625 |
[563,525] |
[170,287] |
-3 |
hSpCas9 |
negative selection |
5424674 |
23556464 |
23556486 |
18 |
- |
27760321 |
MOLM13 |
viability |
ACTGCGTGTTCGTCAGGCCTGG |
NPC1 |
ENSG00000141458 |
0.8556016172922021 |
[1061,926] |
[1483,611] |
6 |
hSpCas9 |
negative selection |
5424675 |
23556541 |
23556563 |
18 |
- |
27760321 |
MOLM13 |
viability |
GGCGGCTGTTCACACGCTGGGG |
NPC1 |
ENSG00000141458 |
-0.26119652851308284 |
[1376,1169] |
[516,665] |
-2 |
hSpCas9 |
negative selection |
5424676 |
23586399 |
23586422 |
18 |
+ |
27661255 |
K562 |
viability |
GGAGGCGGCTCTACTTCCCCGGG |
NPC1 |
ENSG00000141458 |
0.11337522269518352 |
[820,1007] |
[843,738] |
4 |
dCas9-KRAB |
negative selection |
5497189 |
23586395 |
23586418 |
18 |
- |
27661255 |
K562 |
viability |
GGGAAGTAGAGCCGCCTCCGGGG |
NPC1 |
ENSG00000141458 |
-0.01178597949600102 |
[635,713] |
[564,506] |
0 |
dCas9-KRAB |
negative selection |
5497190 |
23586701 |
23586724 |
18 |
- |
27661255 |
K562 |
viability |
GCATCACGGCCAGAAACCGTTGG |
NPC1 |
ENSG00000141458 |
-0.006569444769710053 |
[1030,863] |
[825,695] |
0 |
dCas9-KRAB |
negative selection |
5497191 |
23515929 |
23515952 |
18 |
- |
27260156 |
BXPC3 |
viability |
CAGCAAGATCACGGCGCTCTCGG |
NPC1 |
ENSG00000141458 |
0.09109996787247754 |
[484] |
[457,536,546,635] |
2 |
hSpCas9 |
negative selection |
5531785 |
23516394 |
23516417 |
18 |
+ |
27260156 |
BXPC3 |
viability |
TTCCGAAAGAGACATCGCAATGG |
NPC1 |
ENSG00000141458 |
-0.005754107369416506 |
[73] |
[60,57,59,138] |
0 |
hSpCas9 |
negative selection |
5531786 |
23515862 |
23515885 |
18 |
- |
27260156 |
BXPC3 |
viability |
AGTTTCAGACTCCGTTTCTCTGG |
NPC1 |
ENSG00000141458 |
0.13751233601742952 |
[654] |
[782,687,744,797] |
3 |
hSpCas9 |
negative selection |
5531787 |
23557139 |
23557162 |
18 |
+ |
27260156 |
BXPC3 |
viability |
AAAAGCTATATTGCTATCGATGG |
NPC1 |
ENSG00000141458 |
-0.25224332563429624 |
[780] |
[598,652,617,904] |
-5 |
hSpCas9 |
negative selection |
5558533 |
23568840 |
23568863 |
18 |
- |
27260156 |
BXPC3 |
viability |
AAAGAGTTACAATACTACGTCGG |
NPC1 |
ENSG00000141458 |
-0.6635965561081106 |
[297] |
[161,159,255,216] |
-8 |
hSpCas9 |
negative selection |
5558534 |
23561444 |
23561467 |
18 |
+ |
27260156 |
BXPC3 |
viability |
CGTCAGCGTCCTTCCCACACAGG |
NPC1 |
ENSG00000141458 |
0.3528928551974517 |
[26] |
[28,49,34,28] |
7 |
hSpCas9 |
negative selection |
5558535 |
23516396 |
23516419 |
18 |
- |
27260156 |
BXPC3 |
viability |
AGCCATTGCGATGTCTCTTTCGG |
NPC1 |
ENSG00000141458 |
0.4083334376976403 |
[873] |
[1051,1182,1257,1391] |
8 |
hSpCas9 |
negative selection |
5596067 |
23561477 |
23561500 |
18 |
- |
27260156 |
BXPC3 |
viability |
GGCCCCCTCAAGTAATGACAAGG |
NPC1 |
ENSG00000141458 |
-0.5575911836323248 |
[307] |
[164,227,192,302] |
-8 |
hSpCas9 |
negative selection |
5622790 |
23557116 |
23557139 |
18 |
- |
27260156 |
BXPC3 |
viability |
TCTGTTAATGCAAGTGACAAAGG |
NPC1 |
ENSG00000141458 |
-0.19822769622847491 |
[686] |
[527,572,721,701] |
-4 |
hSpCas9 |
negative selection |
5622791 |
23568921 |
23568944 |
18 |
+ |
27260156 |
BXPC3 |
viability |
TTCAAAAACTGACTCTGTCGAGG |
NPC1 |
ENSG00000141458 |
-0.26673920217546776 |
[203] |
[90,173,172,293] |
-6 |
hSpCas9 |
negative selection |
5622792 |
23515929 |
23515952 |
18 |
- |
27260156 |
A673 |
viability |
CAGCAAGATCACGGCGCTCTCGG |
NPC1 |
ENSG00000141458 |
0.028557486139706906 |
[484] |
[772,498,495,632] |
0 |
hSpCas9 |
negative selection |
5653036 |
23516394 |
23516417 |
18 |
+ |
27260156 |
A673 |
viability |
TTCCGAAAGAGACATCGCAATGG |
NPC1 |
ENSG00000141458 |
-0.00597388772048113 |
[73] |
[95,52,92,114] |
0 |
hSpCas9 |
negative selection |
5653037 |
23515862 |
23515885 |
18 |
- |
27260156 |
A673 |
viability |
AGTTTCAGACTCCGTTTCTCTGG |
NPC1 |
ENSG00000141458 |
0.09124355610440904 |
[654] |
[938,830,859,724] |
2 |
hSpCas9 |
negative selection |
5653038 |
23557139 |
23557162 |
18 |
+ |
27260156 |
A673 |
viability |
AAAAGCTATATTGCTATCGATGG |
NPC1 |
ENSG00000141458 |
-0.3700396696247631 |
[780] |
[780,810,535,781] |
-7 |
hSpCas9 |
negative selection |
5679784 |
23568840 |
23568863 |
18 |
- |
27260156 |
A673 |
viability |
AAAGAGTTACAATACTACGTCGG |
NPC1 |
ENSG00000141458 |
-0.37071827476449115 |
[297] |
[377,266,270,197] |
-7 |
hSpCas9 |
negative selection |
5679785 |
23561444 |
23561467 |
18 |
+ |
27260156 |
A673 |
viability |
CGTCAGCGTCCTTCCCACACAGG |
NPC1 |
ENSG00000141458 |
0.5622169399441983 |
[26] |
[41,46,48,52] |
9 |
hSpCas9 |
negative selection |
5679786 |
23516396 |
23516419 |
18 |
- |
27260156 |
A673 |
viability |
AGCCATTGCGATGTCTCTTTCGG |
NPC1 |
ENSG00000141458 |
0.34179406185036865 |
[873] |
[1531,1262,1208,1339] |
7 |
hSpCas9 |
negative selection |
5717318 |
23561477 |
23561500 |
18 |
- |
27260156 |
A673 |
viability |
GGCCCCCTCAAGTAATGACAAGG |
NPC1 |
ENSG00000141458 |
-0.3057047851686866 |
[307] |
[359,264,269,309] |
-6 |
hSpCas9 |
negative selection |
5744041 |
23557116 |
23557139 |
18 |
- |
27260156 |
A673 |
viability |
TCTGTTAATGCAAGTGACAAAGG |
NPC1 |
ENSG00000141458 |
-0.07718946888648309 |
[686] |
[882,733,775,743] |
-2 |
hSpCas9 |
negative selection |
5744042 |
23568921 |
23568944 |
18 |
+ |
27260156 |
A673 |
viability |
TTCAAAAACTGACTCTGTCGAGG |
NPC1 |
ENSG00000141458 |
0.1589500825065524 |
[203] |
[278,317,197,299] |
4 |
hSpCas9 |
negative selection |
5744043 |
23515929 |
23515952 |
18 |
- |
27260156 |
A375 |
viability |
CAGCAAGATCACGGCGCTCTCGG |
NPC1 |
ENSG00000141458 |
0.47106379692203926 |
[484] |
[630,958,925,659] |
7 |
hSpCas9 |
negative selection |
5774287 |
23516394 |
23516417 |
18 |
+ |
27260156 |
A375 |
viability |
TTCCGAAAGAGACATCGCAATGG |
NPC1 |
ENSG00000141458 |
0.1235951824062691 |
[73] |
[33,189,50,111] |
1 |
hSpCas9 |
negative selection |
5774288 |
23515862 |
23515885 |
18 |
- |
27260156 |
A375 |
viability |
AGTTTCAGACTCCGTTTCTCTGG |
NPC1 |
ENSG00000141458 |
0.5212658507683808 |
[654] |
[1084,1283,1191,878] |
7 |
hSpCas9 |
negative selection |
5774289 |
23557139 |
23557162 |
18 |
+ |
27260156 |
A375 |
viability |
AAAAGCTATATTGCTATCGATGG |
NPC1 |
ENSG00000141458 |
-0.31383880634346484 |
[780] |
[631,915,719,693] |
-4 |
hSpCas9 |
negative selection |
5801035 |
23568840 |
23568863 |
18 |
- |
27260156 |
A375 |
viability |
AAAGAGTTACAATACTACGTCGG |
NPC1 |
ENSG00000141458 |
-1.5847715830024987 |
[297] |
[158,130,86,91] |
-9 |
hSpCas9 |
negative selection |
5801036 |
23561444 |
23561467 |
18 |
+ |
27260156 |
A375 |
viability |
CGTCAGCGTCCTTCCCACACAGG |
NPC1 |
ENSG00000141458 |
-1.049652416154995 |
[26] |
[50,8,0,0] |
-8 |
hSpCas9 |
negative selection |
5801037 |
23516396 |
23516419 |
18 |
- |
27260156 |
A375 |
viability |
AGCCATTGCGATGTCTCTTTCGG |
NPC1 |
ENSG00000141458 |
0.6517245387040217 |
[873] |
[1662,1777,1430,1565] |
8 |
hSpCas9 |
negative selection |
5838569 |
23561477 |
23561500 |
18 |
- |
27260156 |
A375 |
viability |
GGCCCCCTCAAGTAATGACAAGG |
NPC1 |
ENSG00000141458 |
-0.8883883810426461 |
[307] |
[192,352,153,108] |
-8 |
hSpCas9 |
negative selection |
5865292 |
23557116 |
23557139 |
18 |
- |
27260156 |
A375 |
viability |
TCTGTTAATGCAAGTGACAAAGG |
NPC1 |
ENSG00000141458 |
-0.5190475540633753 |
[686] |
[549,615,654,438] |
-6 |
hSpCas9 |
negative selection |
5865293 |
23568921 |
23568944 |
18 |
+ |
27260156 |
A375 |
viability |
TTCAAAAACTGACTCTGTCGAGG |
NPC1 |
ENSG00000141458 |
-0.11713830080883603 |
[203] |
[391,238,161,102] |
-2 |
hSpCas9 |
negative selection |
5865294 |
23515929 |
23515952 |
18 |
- |
27260156 |
COLO741 |
viability |
CAGCAAGATCACGGCGCTCTCGG |
NPC1 |
ENSG00000141458 |
0.07216893626082893 |
[484] |
[762,572,627] |
1 |
hSpCas9 |
negative selection |
5895538 |
23516394 |
23516417 |
18 |
+ |
27260156 |
COLO741 |
viability |
TTCCGAAAGAGACATCGCAATGG |
NPC1 |
ENSG00000141458 |
0.487095492993725 |
[73] |
[96,187,110] |
8 |
hSpCas9 |
negative selection |
5895539 |
23515862 |
23515885 |
18 |
- |
27260156 |
COLO741 |
viability |
AGTTTCAGACTCCGTTTCTCTGG |
NPC1 |
ENSG00000141458 |
0.1005835525276848 |
[654] |
[886,944,859] |
2 |
hSpCas9 |
negative selection |
5895540 |
23557139 |
23557162 |
18 |
+ |
27260156 |
COLO741 |
viability |
AAAAGCTATATTGCTATCGATGG |
NPC1 |
ENSG00000141458 |
-0.5386148677401632 |
[780] |
[802,620,647] |
-8 |
hSpCas9 |
negative selection |
5922286 |
23568840 |
23568863 |
18 |
- |
27260156 |
COLO741 |
viability |
AAAGAGTTACAATACTACGTCGG |
NPC1 |
ENSG00000141458 |
-0.41891129207014666 |
[297] |
[331,342,189] |
-7 |
hSpCas9 |
negative selection |
5922287 |
23561444 |
23561467 |
18 |
+ |
27260156 |
COLO741 |
viability |
CGTCAGCGTCCTTCCCACACAGG |
NPC1 |
ENSG00000141458 |
1.1128635253538333 |
[26] |
[90,86,48] |
9 |
hSpCas9 |
negative selection |
5922288 |
23516396 |
23516419 |
18 |
- |
27260156 |
COLO741 |
viability |
AGCCATTGCGATGTCTCTTTCGG |
NPC1 |
ENSG00000141458 |
0.176930139684918 |
[873] |
[1504,1294,1022] |
4 |
hSpCas9 |
negative selection |
5959820 |
23561477 |
23561500 |
18 |
- |
27260156 |
COLO741 |
viability |
GGCCCCCTCAAGTAATGACAAGG |
NPC1 |
ENSG00000141458 |
-0.38215489145691817 |
[307] |
[317,362,230] |
-7 |
hSpCas9 |
negative selection |
5986543 |
23557116 |
23557139 |
18 |
- |
27260156 |
COLO741 |
viability |
TCTGTTAATGCAAGTGACAAAGG |
NPC1 |
ENSG00000141458 |
-0.03895292567509101 |
[686] |
[889,746,921] |
-1 |
hSpCas9 |
negative selection |
5986544 |
23568921 |
23568944 |
18 |
+ |
27260156 |
COLO741 |
viability |
TTCAAAAACTGACTCTGTCGAGG |
NPC1 |
ENSG00000141458 |
0.12487351611981712 |
[203] |
[300,373,185] |
2 |
hSpCas9 |
negative selection |
5986545 |
23515929 |
23515952 |
18 |
- |
27260156 |
CAL120 |
viability |
CAGCAAGATCACGGCGCTCTCGG |
NPC1 |
ENSG00000141458 |
0.29303242195292656 |
[484] |
[1130,464,681] |
4 |
hSpCas9 |
negative selection |
6016789 |
23516394 |
23516417 |
18 |
+ |
27260156 |
CAL120 |
viability |
TTCCGAAAGAGACATCGCAATGG |
NPC1 |
ENSG00000141458 |
1.4730731383951987 |
[73] |
[682,109,41] |
9 |
hSpCas9 |
negative selection |
6016790 |
23515862 |
23515885 |
18 |
- |
27260156 |
CAL120 |
viability |
AGTTTCAGACTCCGTTTCTCTGG |
NPC1 |
ENSG00000141458 |
0.2111754133633409 |
[654] |
[1241,623,1007] |
3 |
hSpCas9 |
negative selection |
6016791 |
23557139 |
23557162 |
18 |
+ |
27260156 |
CAL120 |
viability |
AAAAGCTATATTGCTATCGATGG |
NPC1 |
ENSG00000141458 |
-0.049282748097348006 |
[780] |
[1049,846,936] |
0 |
hSpCas9 |
negative selection |
6043537 |
23568840 |
23568863 |
18 |
- |
27260156 |
CAL120 |
viability |
AAAGAGTTACAATACTACGTCGG |
NPC1 |
ENSG00000141458 |
-0.14399420354733194 |
[297] |
[334,135,531] |
-2 |
hSpCas9 |
negative selection |
6043538 |
23561444 |
23561467 |
18 |
+ |
27260156 |
CAL120 |
viability |
CGTCAGCGTCCTTCCCACACAGG |
NPC1 |
ENSG00000141458 |
-0.5061038593538614 |
[26] |
[36,13,21] |
-6 |
hSpCas9 |
negative selection |
6043539 |
23516396 |
23516419 |
18 |
- |
27260156 |
CAL120 |
viability |
AGCCATTGCGATGTCTCTTTCGG |
NPC1 |
ENSG00000141458 |
0.4101041820695305 |
[873] |
[1588,1178,1585] |
6 |
hSpCas9 |
negative selection |
6081071 |
23561477 |
23561500 |
18 |
- |
27260156 |
CAL120 |
viability |
GGCCCCCTCAAGTAATGACAAGG |
NPC1 |
ENSG00000141458 |
-0.30052735844665435 |
[307] |
[294,378,257] |
-4 |
hSpCas9 |
negative selection |
6107794 |
23557116 |
23557139 |
18 |
- |
27260156 |
CAL120 |
viability |
TCTGTTAATGCAAGTGACAAAGG |
NPC1 |
ENSG00000141458 |
-0.40189524346752986 |
[686] |
[606,578,746] |
-5 |
hSpCas9 |
negative selection |
6107795 |
23568921 |
23568944 |
18 |
+ |
27260156 |
CAL120 |
viability |
TTCAAAAACTGACTCTGTCGAGG |
NPC1 |
ENSG00000141458 |
0.31315090150791947 |
[203] |
[285,360,294] |
5 |
hSpCas9 |
negative selection |
6107796 |
23515929 |
23515952 |
18 |
- |
27260156 |
CADOES1 |
viability |
CAGCAAGATCACGGCGCTCTCGG |
NPC1 |
ENSG00000141458 |
0.17408031089149167 |
[484] |
[463,480,447,647] |
3 |
hSpCas9 |
negative selection |
6138040 |
23516394 |
23516417 |
18 |
+ |
27260156 |
CADOES1 |
viability |
TTCCGAAAGAGACATCGCAATGG |
NPC1 |
ENSG00000141458 |
-0.4474625456825585 |
[73] |
[79,6,56,57] |
-7 |
hSpCas9 |
negative selection |
6138041 |
23515862 |
23515885 |
18 |
- |
27260156 |
CADOES1 |
viability |
AGTTTCAGACTCCGTTTCTCTGG |
NPC1 |
ENSG00000141458 |
0.19642568080326828 |
[654] |
[773,666,497,858] |
3 |
hSpCas9 |
negative selection |
6138042 |
23557139 |
23557162 |
18 |
+ |
27260156 |
CADOES1 |
viability |
AAAAGCTATATTGCTATCGATGG |
NPC1 |
ENSG00000141458 |
-0.0941800674730916 |
[780] |
[731,576,770,639] |
-2 |
hSpCas9 |
negative selection |
6164788 |
23568840 |
23568863 |
18 |
- |
27260156 |
CADOES1 |
viability |
AAAGAGTTACAATACTACGTCGG |
NPC1 |
ENSG00000141458 |
-0.324834660224916 |
[297] |
[196,397,185,99] |
-5 |
hSpCas9 |
negative selection |
6164789 |
23561444 |
23561467 |
18 |
+ |
27260156 |
CADOES1 |
viability |
CGTCAGCGTCCTTCCCACACAGG |
NPC1 |
ENSG00000141458 |
0.1968183958444225 |
[26] |
[41,31,14,25] |
3 |
hSpCas9 |
negative selection |
6164790 |
23516396 |
23516419 |
18 |
- |
27260156 |
CADOES1 |
viability |
AGCCATTGCGATGTCTCTTTCGG |
NPC1 |
ENSG00000141458 |
0.5462093333086134 |
[873] |
[1114,1371,1164,1092] |
8 |
hSpCas9 |
negative selection |
6202322 |
23561477 |
23561500 |
18 |
- |
27260156 |
CADOES1 |
viability |
GGCCCCCTCAAGTAATGACAAGG |
NPC1 |
ENSG00000141458 |
0.14615775953819765 |
[307] |
[265,471,250,277] |
2 |
hSpCas9 |
negative selection |
6229045 |
23557116 |
23557139 |
18 |
- |
27260156 |
CADOES1 |
viability |
TCTGTTAATGCAAGTGACAAAGG |
NPC1 |
ENSG00000141458 |
0.10131572900897445 |
[686] |
[684,755,561,740] |
1 |
hSpCas9 |
negative selection |
6229046 |
23568921 |
23568944 |
18 |
+ |
27260156 |
CADOES1 |
viability |
TTCAAAAACTGACTCTGTCGAGG |
NPC1 |
ENSG00000141458 |
0.11894697310419566 |
[203] |
[209,201,183,228] |
2 |
hSpCas9 |
negative selection |
6229047 |
23515929 |
23515952 |
18 |
- |
27260156 |
EWS502 |
viability |
CAGCAAGATCACGGCGCTCTCGG |
NPC1 |
ENSG00000141458 |
0.2327070779748127 |
[484] |
[589,522,772,527] |
4 |
hSpCas9 |
negative selection |
6259291 |
23516394 |
23516417 |
18 |
+ |
27260156 |
EWS502 |
viability |
TTCCGAAAGAGACATCGCAATGG |
NPC1 |
ENSG00000141458 |
0.5882160278701964 |
[73] |
[108,125,144,89] |
8 |
hSpCas9 |
negative selection |
6259292 |
23515862 |
23515885 |
18 |
- |
27260156 |
EWS502 |
viability |
AGTTTCAGACTCCGTTTCTCTGG |
NPC1 |
ENSG00000141458 |
0.3641017384873051 |
[654] |
[803,671,1008,1120] |
6 |
hSpCas9 |
negative selection |
6259293 |
23557139 |
23557162 |
18 |
+ |
27260156 |
EWS502 |
viability |
AAAAGCTATATTGCTATCGATGG |
NPC1 |
ENSG00000141458 |
-0.1776692908200146 |
[780] |
[677,777,696,776] |
-3 |
hSpCas9 |
negative selection |
6286039 |
23568840 |
23568863 |
18 |
- |
27260156 |
EWS502 |
viability |
AAAGAGTTACAATACTACGTCGG |
NPC1 |
ENSG00000141458 |
-0.457022372630307 |
[297] |
[206,200,262,253] |
-7 |
hSpCas9 |
negative selection |
6286040 |
23561444 |
23561467 |
18 |
+ |
27260156 |
EWS502 |
viability |
CGTCAGCGTCCTTCCCACACAGG |
NPC1 |
ENSG00000141458 |
0.9025117295082361 |
[26] |
[32,50,39,94] |
9 |
hSpCas9 |
negative selection |
6286041 |
23516396 |
23516419 |
18 |
- |
27260156 |
EWS502 |
viability |
AGCCATTGCGATGTCTCTTTCGG |
NPC1 |
ENSG00000141458 |
0.45995677841310456 |
[873] |
[1248,1268,1394,1172] |
7 |
hSpCas9 |
negative selection |
6323573 |
23561477 |
23561500 |
18 |
- |
27260156 |
EWS502 |
viability |
GGCCCCCTCAAGTAATGACAAGG |
NPC1 |
ENSG00000141458 |
-0.019636876870938513 |
[307] |
[297,390,409,177] |
0 |
hSpCas9 |
negative selection |
6350296 |
23557116 |
23557139 |
18 |
- |
27260156 |
EWS502 |
viability |
TCTGTTAATGCAAGTGACAAAGG |
NPC1 |
ENSG00000141458 |
0.3599930411655433 |
[686] |
[594,904,1007,1292] |
6 |
hSpCas9 |
negative selection |
6350297 |
23568921 |
23568944 |
18 |
+ |
27260156 |
EWS502 |
viability |
TTCAAAAACTGACTCTGTCGAGG |
NPC1 |
ENSG00000141458 |
0.4368285340364896 |
[203] |
[258,378,198,333] |
7 |
hSpCas9 |
negative selection |
6350298 |
23515929 |
23515952 |
18 |
- |
27260156 |
EW8 |
viability |
CAGCAAGATCACGGCGCTCTCGG |
NPC1 |
ENSG00000141458 |
0.09819543398595765 |
[484] |
[637,308,362,404] |
1 |
hSpCas9 |
negative selection |
6380542 |
23516394 |
23516417 |
18 |
+ |
27260156 |
EW8 |
viability |
TTCCGAAAGAGACATCGCAATGG |
NPC1 |
ENSG00000141458 |
-0.12620180072665743 |
[73] |
[32,57,49,76] |
-2 |
hSpCas9 |
negative selection |
6380543 |
23515862 |
23515885 |
18 |
- |
27260156 |
EW8 |
viability |
AGTTTCAGACTCCGTTTCTCTGG |
NPC1 |
ENSG00000141458 |
0.16394766641037228 |
[654] |
[662,562,465,713] |
3 |
hSpCas9 |
negative selection |
6380544 |
23557139 |
23557162 |
18 |
+ |
27260156 |
EW8 |
viability |
AAAAGCTATATTGCTATCGATGG |
NPC1 |
ENSG00000141458 |
-0.20422502814251897 |
[780] |
[565,519,516,599] |
-4 |
hSpCas9 |
negative selection |
6407290 |
23568840 |
23568863 |
18 |
- |
27260156 |
EW8 |
viability |
AAAGAGTTACAATACTACGTCGG |
NPC1 |
ENSG00000141458 |
-0.8362952889734877 |
[297] |
[180,88,101,178] |
-9 |
hSpCas9 |
negative selection |
6407291 |
23561444 |
23561467 |
18 |
+ |
27260156 |
EW8 |
viability |
CGTCAGCGTCCTTCCCACACAGG |
NPC1 |
ENSG00000141458 |
0.2725040555013112 |
[26] |
[61,17,11,19] |
5 |
hSpCas9 |
negative selection |
6407292 |
23516396 |
23516419 |
18 |
- |
27260156 |
EW8 |
viability |
AGCCATTGCGATGTCTCTTTCGG |
NPC1 |
ENSG00000141458 |
0.524530011531077 |
[873] |
[1272,867,1000,960] |
8 |
hSpCas9 |
negative selection |
6444824 |
23561477 |
23561500 |
18 |
- |
27260156 |
EW8 |
viability |
GGCCCCCTCAAGTAATGACAAGG |
NPC1 |
ENSG00000141458 |
-0.19550623095422626 |
[307] |
[397,185,171,142] |
-4 |
hSpCas9 |
negative selection |
6471547 |
23557116 |
23557139 |
18 |
- |
27260156 |
EW8 |
viability |
TCTGTTAATGCAAGTGACAAAGG |
NPC1 |
ENSG00000141458 |
0.2616927560192357 |
[686] |
[1008,499,584,624] |
5 |
hSpCas9 |
negative selection |
6471548 |
23568921 |
23568944 |
18 |
+ |
27260156 |
EW8 |
viability |
TTCAAAAACTGACTCTGTCGAGG |
NPC1 |
ENSG00000141458 |
0.34073349715899437 |
[203] |
[301,289,124,144] |
6 |
hSpCas9 |
negative selection |
6471549 |
23515929 |
23515952 |
18 |
- |
27260156 |
CORL105 |
viability |
CAGCAAGATCACGGCGCTCTCGG |
NPC1 |
ENSG00000141458 |
0.01754202833493272 |
[484] |
[804,385,577,541] |
0 |
hSpCas9 |
negative selection |
6501793 |
23516394 |
23516417 |
18 |
+ |
27260156 |
CORL105 |
viability |
TTCCGAAAGAGACATCGCAATGG |
NPC1 |
ENSG00000141458 |
0.22357075204608945 |
[73] |
[122,32,91,156] |
4 |
hSpCas9 |
negative selection |
6501794 |
23515862 |
23515885 |
18 |
- |
27260156 |
CORL105 |
viability |
AGTTTCAGACTCCGTTTCTCTGG |
NPC1 |
ENSG00000141458 |
-0.02135409388136711 |
[654] |
[841,582,868,751] |
0 |
hSpCas9 |
negative selection |
6501795 |
23557139 |
23557162 |
18 |
+ |
27260156 |
CORL105 |
viability |
AAAAGCTATATTGCTATCGATGG |
NPC1 |
ENSG00000141458 |
-0.13357356152200972 |
[780] |
[798,705,1444,481] |
-2 |
hSpCas9 |
negative selection |
6528541 |
23568840 |
23568863 |
18 |
- |
27260156 |
CORL105 |
viability |
AAAGAGTTACAATACTACGTCGG |
NPC1 |
ENSG00000141458 |
-0.5695041639124981 |
[297] |
[328,296,141,159] |
-7 |
hSpCas9 |
negative selection |
6528542 |
23561444 |
23561467 |
18 |
+ |
27260156 |
CORL105 |
viability |
CGTCAGCGTCCTTCCCACACAGG |
NPC1 |
ENSG00000141458 |
1.206617782794222 |
[26] |
[55,109,106,22] |
9 |
hSpCas9 |
negative selection |
6528543 |
23516396 |
23516419 |
18 |
- |
27260156 |
CORL105 |
viability |
AGCCATTGCGATGTCTCTTTCGG |
NPC1 |
ENSG00000141458 |
0.4482655494286091 |
[873] |
[1651,1205,1474,1275] |
7 |
hSpCas9 |
negative selection |
6566075 |
23561477 |
23561500 |
18 |
- |
27260156 |
CORL105 |
viability |
GGCCCCCTCAAGTAATGACAAGG |
NPC1 |
ENSG00000141458 |
0.044432257344967696 |
[307] |
[340,576,309,244] |
0 |
hSpCas9 |
negative selection |
6592798 |
23557116 |
23557139 |
18 |
- |
27260156 |
CORL105 |
viability |
TCTGTTAATGCAAGTGACAAAGG |
NPC1 |
ENSG00000141458 |
-0.22259819124690555 |
[686] |
[718,595,942,541] |
-4 |
hSpCas9 |
negative selection |
6592799 |
23568921 |
23568944 |
18 |
+ |
27260156 |
CORL105 |
viability |
TTCAAAAACTGACTCTGTCGAGG |
NPC1 |
ENSG00000141458 |
0.4244910703376844 |
[203] |
[328,237,416,314] |
7 |
hSpCas9 |
negative selection |
6592800 |
23515929 |
23515952 |
18 |
- |
27260156 |
HS294T |
viability |
CAGCAAGATCACGGCGCTCTCGG |
NPC1 |
ENSG00000141458 |
0.10363615542711921 |
[484] |
[134,182,294,198] |
1 |
hSpCas9 |
negative selection |
6623044 |
23516394 |
23516417 |
18 |
+ |
27260156 |
HS294T |
viability |
TTCCGAAAGAGACATCGCAATGG |
NPC1 |
ENSG00000141458 |
-0.29247045862347143 |
[73] |
[21,11,20,41] |
-4 |
hSpCas9 |
negative selection |
6623045 |
23515862 |
23515885 |
18 |
- |
27260156 |
HS294T |
viability |
AGTTTCAGACTCCGTTTCTCTGG |
NPC1 |
ENSG00000141458 |
-0.0738142540469996 |
[654] |
[239,181,214,343] |
-1 |
hSpCas9 |
negative selection |
6623046 |
23557139 |
23557162 |
18 |
+ |
27260156 |
HS294T |
viability |
AAAAGCTATATTGCTATCGATGG |
NPC1 |
ENSG00000141458 |
-0.22383509570675042 |
[780] |
[246,218,260,318] |
-3 |
hSpCas9 |
negative selection |
6649792 |
23568840 |
23568863 |
18 |
- |
27260156 |
HS294T |
viability |
AAAGAGTTACAATACTACGTCGG |
NPC1 |
ENSG00000141458 |
-0.462157626572668 |
[297] |
[110,44,62,119] |
-6 |
hSpCas9 |
negative selection |
6649793 |
23561444 |
23561467 |
18 |
+ |
27260156 |
HS294T |
viability |
CGTCAGCGTCCTTCCCACACAGG |
NPC1 |
ENSG00000141458 |
-0.08656475853296897 |
[26] |
[7,4,9,17] |
-1 |
hSpCas9 |
negative selection |
6649794 |
23516396 |
23516419 |
18 |
- |
27260156 |
HS294T |
viability |
AGCCATTGCGATGTCTCTTTCGG |
NPC1 |
ENSG00000141458 |
0.3288731619382449 |
[873] |
[425,404,410,460] |
4 |
hSpCas9 |
negative selection |
6687326 |
23561477 |
23561500 |
18 |
- |
27260156 |
HS294T |
viability |
GGCCCCCTCAAGTAATGACAAGG |
NPC1 |
ENSG00000141458 |
-0.8054921065044607 |
[307] |
[41,58,96,78] |
-8 |
hSpCas9 |
negative selection |
6714049 |
23557116 |
23557139 |
18 |
- |
27260156 |
HS294T |
viability |
TCTGTTAATGCAAGTGACAAAGG |
NPC1 |
ENSG00000141458 |
-0.026465476059044812 |
[686] |
[229,222,270,334] |
0 |
hSpCas9 |
negative selection |
6714050 |
23568921 |
23568944 |
18 |
+ |
27260156 |
HS294T |
viability |
TTCAAAAACTGACTCTGTCGAGG |
NPC1 |
ENSG00000141458 |
0.2390078165579489 |
[203] |
[101,58,114,96] |
3 |
hSpCas9 |
negative selection |
6714051 |
23515929 |
23515952 |
18 |
- |
27260156 |
HCC44 |
viability |
CAGCAAGATCACGGCGCTCTCGG |
NPC1 |
ENSG00000141458 |
0.20405966224932717 |
[484] |
[597,422,1015,579] |
3 |
hSpCas9 |
negative selection |
6744295 |
23516394 |
23516417 |
18 |
+ |
27260156 |
HCC44 |
viability |
TTCCGAAAGAGACATCGCAATGG |
NPC1 |
ENSG00000141458 |
-0.3126743098395868 |
[73] |
[53,62,22,118] |
-5 |
hSpCas9 |
negative selection |
6744296 |
23515862 |
23515885 |
18 |
- |
27260156 |
HCC44 |
viability |
AGTTTCAGACTCCGTTTCTCTGG |
NPC1 |
ENSG00000141458 |
0.22979061071047446 |
[654] |
[892,736,869,984] |
3 |
hSpCas9 |
negative selection |
6744297 |
23557139 |
23557162 |
18 |
+ |
27260156 |
HCC44 |
viability |
AAAAGCTATATTGCTATCGATGG |
NPC1 |
ENSG00000141458 |
-0.12241775968042745 |
[780] |
[761,946,946,589] |
-2 |
hSpCas9 |
negative selection |
6771043 |
23568840 |
23568863 |
18 |
- |
27260156 |
HCC44 |
viability |
AAAGAGTTACAATACTACGTCGG |
NPC1 |
ENSG00000141458 |
-0.5873233322679864 |
[297] |
[271,117,276,255] |
-7 |
hSpCas9 |
negative selection |
6771044 |
23561444 |
23561467 |
18 |
+ |
27260156 |
HCC44 |
viability |
CGTCAGCGTCCTTCCCACACAGG |
NPC1 |
ENSG00000141458 |
1.0694195354124632 |
[26] |
[42,35,107,77] |
9 |
hSpCas9 |
negative selection |
6771045 |
23516396 |
23516419 |
18 |
- |
27260156 |
HCC44 |
viability |
AGCCATTGCGATGTCTCTTTCGG |
NPC1 |
ENSG00000141458 |
0.3952855481216212 |
[873] |
[1253,1251,1513,1211] |
6 |
hSpCas9 |
negative selection |
6808577 |
23561477 |
23561500 |
18 |
- |
27260156 |
HCC44 |
viability |
GGCCCCCTCAAGTAATGACAAGG |
NPC1 |
ENSG00000141458 |
-0.48448284658560303 |
[307] |
[330,110,301,284] |
-6 |
hSpCas9 |
negative selection |
6835300 |
23557116 |
23557139 |
18 |
- |
27260156 |
HCC44 |
viability |
TCTGTTAATGCAAGTGACAAAGG |
NPC1 |
ENSG00000141458 |
0.243345822566305 |
[686] |
[733,1112,940,844] |
4 |
hSpCas9 |
negative selection |
6835301 |
23568921 |
23568944 |
18 |
+ |
27260156 |
HCC44 |
viability |
TTCAAAAACTGACTCTGTCGAGG |
NPC1 |
ENSG00000141458 |
0.11904759748412475 |
[203] |
[244,330,214,192] |
1 |
hSpCas9 |
negative selection |
6835302 |
23515929 |
23515952 |
18 |
- |
27260156 |
G402 |
viability |
CAGCAAGATCACGGCGCTCTCGG |
NPC1 |
ENSG00000141458 |
-0.32143472365572556 |
[484] |
[417,587,428,456] |
-4 |
hSpCas9 |
negative selection |
6865546 |
23516394 |
23516417 |
18 |
+ |
27260156 |
G402 |
viability |
TTCCGAAAGAGACATCGCAATGG |
NPC1 |
ENSG00000141458 |
-1.3733043856514695 |
[73] |
[61,15,26,36] |
-9 |
hSpCas9 |
negative selection |
6865547 |
23515862 |
23515885 |
18 |
- |
27260156 |
G402 |
viability |
AGTTTCAGACTCCGTTTCTCTGG |
NPC1 |
ENSG00000141458 |
0.4409533849995493 |
[654] |
[1640,820,1222,732] |
5 |
hSpCas9 |
negative selection |
6865548 |
23557139 |
23557162 |
18 |
+ |
27260156 |
G402 |
viability |
AAAAGCTATATTGCTATCGATGG |
NPC1 |
ENSG00000141458 |
0.2546936509969938 |
[780] |
[771,1670,1114,971] |
3 |
hSpCas9 |
negative selection |
6892294 |
23568840 |
23568863 |
18 |
- |
27260156 |
G402 |
viability |
AAAGAGTTACAATACTACGTCGG |
NPC1 |
ENSG00000141458 |
-0.421169572197415 |
[297] |
[457,150,52,434] |
-5 |
hSpCas9 |
negative selection |
6892295 |
23561444 |
23561467 |
18 |
+ |
27260156 |
G402 |
viability |
CGTCAGCGTCCTTCCCACACAGG |
NPC1 |
ENSG00000141458 |
0.23602218519535745 |
[26] |
[68,23,14,49] |
3 |
hSpCas9 |
negative selection |
6892296 |
23516396 |
23516419 |
18 |
- |
27260156 |
G402 |
viability |
AGCCATTGCGATGTCTCTTTCGG |
NPC1 |
ENSG00000141458 |
1.0831249756899477 |
[873] |
[2389,2083,2207,2350] |
9 |
hSpCas9 |
negative selection |
6929828 |
23561477 |
23561500 |
18 |
- |
27260156 |
G402 |
viability |
GGCCCCCTCAAGTAATGACAAGG |
NPC1 |
ENSG00000141458 |
-0.8237664744296473 |
[307] |
[150,231,207,247] |
-7 |
hSpCas9 |
negative selection |
6956551 |
23557116 |
23557139 |
18 |
- |
27260156 |
G402 |
viability |
TCTGTTAATGCAAGTGACAAAGG |
NPC1 |
ENSG00000141458 |
-0.09450154209413059 |
[686] |
[918,746,881,614] |
-1 |
hSpCas9 |
negative selection |
6956552 |
23568921 |
23568944 |
18 |
+ |
27260156 |
G402 |
viability |
TTCAAAAACTGACTCTGTCGAGG |
NPC1 |
ENSG00000141458 |
0.8822906142100859 |
[203] |
[637,181,641,384] |
9 |
hSpCas9 |
negative selection |
6956553 |
23515929 |
23515952 |
18 |
- |
27260156 |
L33 |
viability |
CAGCAAGATCACGGCGCTCTCGG |
NPC1 |
ENSG00000141458 |
0.22911234989777515 |
[484] |
[527,208,368,648] |
5 |
hSpCas9 |
negative selection |
6986797 |
23516394 |
23516417 |
18 |
+ |
27260156 |
L33 |
viability |
TTCCGAAAGAGACATCGCAATGG |
NPC1 |
ENSG00000141458 |
-0.14987247102693058 |
[73] |
[60,35,54,30] |
-3 |
hSpCas9 |
negative selection |
6986798 |
23515862 |
23515885 |
18 |
- |
27260156 |
L33 |
viability |
AGTTTCAGACTCCGTTTCTCTGG |
NPC1 |
ENSG00000141458 |
-0.1791556241938994 |
[654] |
[432,212,431,676] |
-4 |
hSpCas9 |
negative selection |
6986799 |
23557139 |
23557162 |
18 |
+ |
27260156 |
L33 |
viability |
AAAAGCTATATTGCTATCGATGG |
NPC1 |
ENSG00000141458 |
-0.08685161897482974 |
[780] |
[825,277,475,677] |
-2 |
hSpCas9 |
negative selection |
7013545 |
23568840 |
23568863 |
18 |
- |
27260156 |
L33 |
viability |
AAAGAGTTACAATACTACGTCGG |
NPC1 |
ENSG00000141458 |
-0.6202552083527294 |
[297] |
[174,73,156,170] |
-9 |
hSpCas9 |
negative selection |
7013546 |
23561444 |
23561467 |
18 |
+ |
27260156 |
L33 |
viability |
CGTCAGCGTCCTTCCCACACAGG |
NPC1 |
ENSG00000141458 |
0.4655714135508777 |
[26] |
[29,11,26,46] |
8 |
hSpCas9 |
negative selection |
7013547 |
23516396 |
23516419 |
18 |
- |
27260156 |
L33 |
viability |
AGCCATTGCGATGTCTCTTTCGG |
NPC1 |
ENSG00000141458 |
0.22141308410935834 |
[873] |
[1058,467,674,801] |
5 |
hSpCas9 |
negative selection |
7051079 |
23561477 |
23561500 |
18 |
- |
27260156 |
L33 |
viability |
GGCCCCCTCAAGTAATGACAAGG |
NPC1 |
ENSG00000141458 |
-0.09433363390482252 |
[307] |
[315,122,151,294] |
-2 |
hSpCas9 |
negative selection |
7077802 |
23557116 |
23557139 |
18 |
- |
27260156 |
L33 |
viability |
TCTGTTAATGCAAGTGACAAAGG |
NPC1 |
ENSG00000141458 |
0.13610152845662182 |
[686] |
[808,311,428,764] |
3 |
hSpCas9 |
negative selection |
7077803 |
23568921 |
23568944 |
18 |
+ |
27260156 |
L33 |
viability |
TTCAAAAACTGACTCTGTCGAGG |
NPC1 |
ENSG00000141458 |
0.204638452527531 |
[203] |
[208,71,154,308] |
4 |
hSpCas9 |
negative selection |
7077804 |
23515929 |
23515952 |
18 |
- |
27260156 |
K562 |
viability |
CAGCAAGATCACGGCGCTCTCGG |
NPC1 |
ENSG00000141458 |
0.5931882785243955 |
[484] |
[517,564,1023,490] |
7 |
hSpCas9 |
negative selection |
7108048 |
23516394 |
23516417 |
18 |
+ |
27260156 |
K562 |
viability |
TTCCGAAAGAGACATCGCAATGG |
NPC1 |
ENSG00000141458 |
-2.3227090185510515 |
[73] |
[29,6,7,8] |
-9 |
hSpCas9 |
negative selection |
7108049 |
23515862 |
23515885 |
18 |
- |
27260156 |
K562 |
viability |
AGTTTCAGACTCCGTTTCTCTGG |
NPC1 |
ENSG00000141458 |
-0.09105264495731574 |
[654] |
[353,691,509,608] |
-1 |
hSpCas9 |
negative selection |
7108050 |
23557139 |
23557162 |
18 |
+ |
27260156 |
K562 |
viability |
AAAAGCTATATTGCTATCGATGG |
NPC1 |
ENSG00000141458 |
0.2245659125684225 |
[780] |
[1112,564,733,832] |
3 |
hSpCas9 |
negative selection |
7134796 |
23568840 |
23568863 |
18 |
- |
27260156 |
K562 |
viability |
AAAGAGTTACAATACTACGTCGG |
NPC1 |
ENSG00000141458 |
-1.0889168600317785 |
[297] |
[121,215,25,135] |
-8 |
hSpCas9 |
negative selection |
7134797 |
23561444 |
23561467 |
18 |
+ |
27260156 |
K562 |
viability |
CGTCAGCGTCCTTCCCACACAGG |
NPC1 |
ENSG00000141458 |
-1.0757775062315584 |
[26] |
[25,1,14,3] |
-8 |
hSpCas9 |
negative selection |
7134798 |
23516396 |
23516419 |
18 |
- |
27260156 |
K562 |
viability |
AGCCATTGCGATGTCTCTTTCGG |
NPC1 |
ENSG00000141458 |
0.5952658531172584 |
[873] |
[839,1124,1775,938] |
7 |
hSpCas9 |
negative selection |
7172330 |
23561477 |
23561500 |
18 |
- |
27260156 |
K562 |
viability |
GGCCCCCTCAAGTAATGACAAGG |
NPC1 |
ENSG00000141458 |
-0.17384462788707578 |
[307] |
[53,284,486,140] |
-2 |
hSpCas9 |
negative selection |
7199053 |
23557116 |
23557139 |
18 |
- |
27260156 |
K562 |
viability |
TCTGTTAATGCAAGTGACAAAGG |
NPC1 |
ENSG00000141458 |
-0.518852701962246 |
[686] |
[440,393,544,330] |
-6 |
hSpCas9 |
negative selection |
7199054 |
23568921 |
23568944 |
18 |
+ |
27260156 |
K562 |
viability |
TTCAAAAACTGACTCTGTCGAGG |
NPC1 |
ENSG00000141458 |
-0.34204663687488024 |
[203] |
[140,148,195,90] |
-4 |
hSpCas9 |
negative selection |
7199055 |
23515929 |
23515952 |
18 |
- |
27260156 |
HT29 |
viability |
CAGCAAGATCACGGCGCTCTCGG |
NPC1 |
ENSG00000141458 |
0.20024474480065396 |
[484] |
[575,700,728,690] |
4 |
hSpCas9 |
negative selection |
7229299 |
23516394 |
23516417 |
18 |
+ |
27260156 |
HT29 |
viability |
TTCCGAAAGAGACATCGCAATGG |
NPC1 |
ENSG00000141458 |
0.17319939206943324 |
[73] |
[138,110,86,74] |
3 |
hSpCas9 |
negative selection |
7229300 |
23515862 |
23515885 |
18 |
- |
27260156 |
HT29 |
viability |
AGTTTCAGACTCCGTTTCTCTGG |
NPC1 |
ENSG00000141458 |
0.25991210365329487 |
[654] |
[784,1110,1161,771] |
5 |
hSpCas9 |
negative selection |
7229301 |
23557139 |
23557162 |
18 |
+ |
27260156 |
HT29 |
viability |
AAAAGCTATATTGCTATCGATGG |
NPC1 |
ENSG00000141458 |
-0.39229449826638524 |
[780] |
[804,783,787,544] |
-6 |
hSpCas9 |
negative selection |
7256047 |
23568840 |
23568863 |
18 |
- |
27260156 |
HT29 |
viability |
AAAGAGTTACAATACTACGTCGG |
NPC1 |
ENSG00000141458 |
-0.2501081792369656 |
[297] |
[262,284,418,250] |
-5 |
hSpCas9 |
negative selection |
7256048 |
23561444 |
23561467 |
18 |
+ |
27260156 |
HT29 |
viability |
CGTCAGCGTCCTTCCCACACAGG |
NPC1 |
ENSG00000141458 |
0.8495613082203692 |
[26] |
[98,54,53,33] |
9 |
hSpCas9 |
negative selection |
7256049 |
23516396 |
23516419 |
18 |
- |
27260156 |
HT29 |
viability |
AGCCATTGCGATGTCTCTTTCGG |
NPC1 |
ENSG00000141458 |
0.4206060741438694 |
[873] |
[1474,1426,1614,1193] |
7 |
hSpCas9 |
negative selection |
7293581 |
23561477 |
23561500 |
18 |
- |
27260156 |
HT29 |
viability |
GGCCCCCTCAAGTAATGACAAGG |
NPC1 |
ENSG00000141458 |
-0.3469327221229157 |
[307] |
[259,290,358,265] |
-6 |
hSpCas9 |
negative selection |
7320304 |
23557116 |
23557139 |
18 |
- |
27260156 |
HT29 |
viability |
TCTGTTAATGCAAGTGACAAAGG |
NPC1 |
ENSG00000141458 |
-0.12908824738982583 |
[686] |
[796,741,659,840] |
-3 |
hSpCas9 |
negative selection |
7320305 |
23568921 |
23568944 |
18 |
+ |
27260156 |
HT29 |
viability |
TTCAAAAACTGACTCTGTCGAGG |
NPC1 |
ENSG00000141458 |
0.5444870872609744 |
[203] |
[242,479,430,298] |
9 |
hSpCas9 |
negative selection |
7320306 |
23515929 |
23515952 |
18 |
- |
27260156 |
MHHES1 |
viability |
CAGCAAGATCACGGCGCTCTCGG |
NPC1 |
ENSG00000141458 |
0.011837371663572085 |
[484] |
[576,503,634,487] |
0 |
hSpCas9 |
negative selection |
7350550 |
23516394 |
23516417 |
18 |
+ |
27260156 |
MHHES1 |
viability |
TTCCGAAAGAGACATCGCAATGG |
NPC1 |
ENSG00000141458 |
0.22086247410567017 |
[73] |
[43,190,96,64] |
4 |
hSpCas9 |
negative selection |
7350551 |
23515862 |
23515885 |
18 |
- |
27260156 |
MHHES1 |
viability |
AGTTTCAGACTCCGTTTCTCTGG |
NPC1 |
ENSG00000141458 |
0.20150188313553563 |
[654] |
[1087,815,1066,509] |
3 |
hSpCas9 |
negative selection |
7350552 |
23557139 |
23557162 |
18 |
+ |
27260156 |
MHHES1 |
viability |
AAAAGCTATATTGCTATCGATGG |
NPC1 |
ENSG00000141458 |
-0.06449233703480739 |
[780] |
[1265,669,820,663] |
-1 |
hSpCas9 |
negative selection |
7377298 |
23568840 |
23568863 |
18 |
- |
27260156 |
MHHES1 |
viability |
AAAGAGTTACAATACTACGTCGG |
NPC1 |
ENSG00000141458 |
-0.24099797558189007 |
[297] |
[289,217,216,375] |
-4 |
hSpCas9 |
negative selection |
7377299 |
23561444 |
23561467 |
18 |
+ |
27260156 |
MHHES1 |
viability |
CGTCAGCGTCCTTCCCACACAGG |
NPC1 |
ENSG00000141458 |
0.800945685945027 |
[26] |
[52,99,63,8] |
9 |
hSpCas9 |
negative selection |
7377300 |
23516396 |
23516419 |
18 |
- |
27260156 |
MHHES1 |
viability |
AGCCATTGCGATGTCTCTTTCGG |
NPC1 |
ENSG00000141458 |
0.5766034135684986 |
[873] |
[1407,1813,1357,1319] |
8 |
hSpCas9 |
negative selection |
7414832 |
23561477 |
23561500 |
18 |
- |
27260156 |
MHHES1 |
viability |
GGCCCCCTCAAGTAATGACAAGG |
NPC1 |
ENSG00000141458 |
-0.35885167494115056 |
[307] |
[250,299,278,250] |
-6 |
hSpCas9 |
negative selection |
7441555 |
23557116 |
23557139 |
18 |
- |
27260156 |
MHHES1 |
viability |
TCTGTTAATGCAAGTGACAAAGG |
NPC1 |
ENSG00000141458 |
0.2648153072734438 |
[686] |
[1220,1031,850,693] |
5 |
hSpCas9 |
negative selection |
7441556 |
23568921 |
23568944 |
18 |
+ |
27260156 |
MHHES1 |
viability |
TTCAAAAACTGACTCTGTCGAGG |
NPC1 |
ENSG00000141458 |
-0.2166345809389838 |
[203] |
[280,263,169,108] |
-4 |
hSpCas9 |
negative selection |
7441557 |
23515929 |
23515952 |
18 |
- |
27260156 |
MEWO |
viability |
CAGCAAGATCACGGCGCTCTCGG |
NPC1 |
ENSG00000141458 |
0.2145862067427511 |
[484] |
[592,589,408] |
5 |
hSpCas9 |
negative selection |
7471801 |
23516394 |
23516417 |
18 |
+ |
27260156 |
MEWO |
viability |
TTCCGAAAGAGACATCGCAATGG |
NPC1 |
ENSG00000141458 |
1.0633344151834125 |
[73] |
[205,119,119] |
9 |
hSpCas9 |
negative selection |
7471802 |
23515862 |
23515885 |
18 |
- |
27260156 |
MEWO |
viability |
AGTTTCAGACTCCGTTTCTCTGG |
NPC1 |
ENSG00000141458 |
0.34380037208584635 |
[654] |
[715,767,836] |
7 |
hSpCas9 |
negative selection |
7471803 |
23557139 |
23557162 |
18 |
+ |
27260156 |
MEWO |
viability |
AAAAGCTATATTGCTATCGATGG |
NPC1 |
ENSG00000141458 |
-0.1333892134629182 |
[780] |
[752,689,571] |
-3 |
hSpCas9 |
negative selection |
7498549 |
23568840 |
23568863 |
18 |
- |
27260156 |
MEWO |
viability |
AAAGAGTTACAATACTACGTCGG |
NPC1 |
ENSG00000141458 |
-0.4225847037084035 |
[297] |
[350,141,158] |
-7 |
hSpCas9 |
negative selection |
7498550 |
23561444 |
23561467 |
18 |
+ |
27260156 |
MEWO |
viability |
CGTCAGCGTCCTTCCCACACAGG |
NPC1 |
ENSG00000141458 |
0.4152971386973121 |
[26] |
[53,30,19] |
8 |
hSpCas9 |
negative selection |
7498551 |
23516396 |
23516419 |
18 |
- |
27260156 |
MEWO |
viability |
AGCCATTGCGATGTCTCTTTCGG |
NPC1 |
ENSG00000141458 |
0.21591841438034243 |
[873] |
[1178,802,911] |
5 |
hSpCas9 |
negative selection |
7536083 |
23561477 |
23561500 |
18 |
- |
27260156 |
MEWO |
viability |
GGCCCCCTCAAGTAATGACAAGG |
NPC1 |
ENSG00000141458 |
0.06513656460707173 |
[307] |
[247,292,352] |
1 |
hSpCas9 |
negative selection |
7562806 |
23557116 |
23557139 |
18 |
- |
27260156 |
MEWO |
viability |
TCTGTTAATGCAAGTGACAAAGG |
NPC1 |
ENSG00000141458 |
-0.027649697823041275 |
[686] |
[843,590,497] |
0 |
hSpCas9 |
negative selection |
7562807 |
23568921 |
23568944 |
18 |
+ |
27260156 |
MEWO |
viability |
TTCAAAAACTGACTCTGTCGAGG |
NPC1 |
ENSG00000141458 |
0.1673293003583065 |
[203] |
[177,191,265] |
3 |
hSpCas9 |
negative selection |
7562808 |
23515929 |
23515952 |
18 |
- |
27260156 |
LNCAPCLONEFGC |
viability |
CAGCAAGATCACGGCGCTCTCGG |
NPC1 |
ENSG00000141458 |
0.24291313748186508 |
[484] |
[654,342,584,514] |
4 |
hSpCas9 |
negative selection |
7593052 |
23516394 |
23516417 |
18 |
+ |
27260156 |
LNCAPCLONEFGC |
viability |
TTCCGAAAGAGACATCGCAATGG |
NPC1 |
ENSG00000141458 |
0.17954576469414274 |
[73] |
[37,138,40,76] |
3 |
hSpCas9 |
negative selection |
7593053 |
23515862 |
23515885 |
18 |
- |
27260156 |
LNCAPCLONEFGC |
viability |
AGTTTCAGACTCCGTTTCTCTGG |
NPC1 |
ENSG00000141458 |
0.2281958493791736 |
[654] |
[642,618,892,659] |
3 |
hSpCas9 |
negative selection |
7593054 |
23557139 |
23557162 |
18 |
+ |
27260156 |
LNCAPCLONEFGC |
viability |
AAAAGCTATATTGCTATCGATGG |
NPC1 |
ENSG00000141458 |
-0.2839565365313654 |
[780] |
[569,457,666,649] |
-4 |
hSpCas9 |
negative selection |
7619800 |
23568840 |
23568863 |
18 |
- |
27260156 |
LNCAPCLONEFGC |
viability |
AAAGAGTTACAATACTACGTCGG |
NPC1 |
ENSG00000141458 |
-0.743362116065953 |
[297] |
[105,230,77,213] |
-8 |
hSpCas9 |
negative selection |
7619801 |
23561444 |
23561467 |
18 |
+ |
27260156 |
LNCAPCLONEFGC |
viability |
CGTCAGCGTCCTTCCCACACAGG |
NPC1 |
ENSG00000141458 |
0.9035947739265682 |
[26] |
[43,30,65,45] |
9 |
hSpCas9 |
negative selection |
7619802 |
23516396 |
23516419 |
18 |
- |
27260156 |
LNCAPCLONEFGC |
viability |
AGCCATTGCGATGTCTCTTTCGG |
NPC1 |
ENSG00000141458 |
0.6802745329035867 |
[873] |
[1150,1395,1256,1261] |
9 |
hSpCas9 |
negative selection |
7657334 |
23561477 |
23561500 |
18 |
- |
27260156 |
LNCAPCLONEFGC |
viability |
GGCCCCCTCAAGTAATGACAAGG |
NPC1 |
ENSG00000141458 |
-0.6275184964715492 |
[307] |
[118,149,237,226] |
-7 |
hSpCas9 |
negative selection |
7684057 |
23557116 |
23557139 |
18 |
- |
27260156 |
LNCAPCLONEFGC |
viability |
TCTGTTAATGCAAGTGACAAAGG |
NPC1 |
ENSG00000141458 |
-0.3431751860642722 |
[686] |
[368,448,590,572] |
-5 |
hSpCas9 |
negative selection |
7684058 |
23568921 |
23568944 |
18 |
+ |
27260156 |
LNCAPCLONEFGC |
viability |
TTCAAAAACTGACTCTGTCGAGG |
NPC1 |
ENSG00000141458 |
-0.6582729626377422 |
[203] |
[49,124,183,119] |
-7 |
hSpCas9 |
negative selection |
7684059 |
23515929 |
23515952 |
18 |
- |
27260156 |
PANC0327 |
viability |
CAGCAAGATCACGGCGCTCTCGG |
NPC1 |
ENSG00000141458 |
0.22445540345540735 |
[484] |
[564,422,643,396] |
3 |
hSpCas9 |
negative selection |
7714303 |
23516394 |
23516417 |
18 |
+ |
27260156 |
PANC0327 |
viability |
TTCCGAAAGAGACATCGCAATGG |
NPC1 |
ENSG00000141458 |
-1.545962300501055 |
[73] |
[28,26,21,11] |
-9 |
hSpCas9 |
negative selection |
7714304 |
23515862 |
23515885 |
18 |
- |
27260156 |
PANC0327 |
viability |
AGTTTCAGACTCCGTTTCTCTGG |
NPC1 |
ENSG00000141458 |
-0.1408479848189122 |
[654] |
[877,367,457,455] |
-2 |
hSpCas9 |
negative selection |
7714305 |
23557139 |
23557162 |
18 |
+ |
27260156 |
PANC0327 |
viability |
AAAAGCTATATTGCTATCGATGG |
NPC1 |
ENSG00000141458 |
-0.0434315231427459 |
[780] |
[938,538,776,476] |
0 |
hSpCas9 |
negative selection |
7741051 |
23568840 |
23568863 |
18 |
- |
27260156 |
PANC0327 |
viability |
AAAGAGTTACAATACTACGTCGG |
NPC1 |
ENSG00000141458 |
-1.0901795726387915 |
[297] |
[162,49,103,192] |
-8 |
hSpCas9 |
negative selection |
7741052 |
23561444 |
23561467 |
18 |
+ |
27260156 |
PANC0327 |
viability |
CGTCAGCGTCCTTCCCACACAGG |
NPC1 |
ENSG00000141458 |
0.07176749603940635 |
[26] |
[17,11,57,13] |
1 |
hSpCas9 |
negative selection |
7741053 |
23516396 |
23516419 |
18 |
- |
27260156 |
PANC0327 |
viability |
AGCCATTGCGATGTCTCTTTCGG |
NPC1 |
ENSG00000141458 |
0.35214220842390265 |
[873] |
[981,873,975,1145] |
5 |
hSpCas9 |
negative selection |
7778585 |
23561477 |
23561500 |
18 |
- |
27260156 |
PANC0327 |
viability |
GGCCCCCTCAAGTAATGACAAGG |
NPC1 |
ENSG00000141458 |
-0.5288155360758171 |
[307] |
[155,273,236,77] |
-6 |
hSpCas9 |
negative selection |
7805308 |
23557116 |
23557139 |
18 |
- |
27260156 |
PANC0327 |
viability |
TCTGTTAATGCAAGTGACAAAGG |
NPC1 |
ENSG00000141458 |
-0.44133429954668923 |
[686] |
[703,336,424,366] |
-6 |
hSpCas9 |
negative selection |
7805309 |
23568921 |
23568944 |
18 |
+ |
27260156 |
PANC0327 |
viability |
TTCAAAAACTGACTCTGTCGAGG |
NPC1 |
ENSG00000141458 |
-0.25595014726881815 |
[203] |
[156,94,280,81] |
-4 |
hSpCas9 |
negative selection |
7805310 |
23515929 |
23515952 |
18 |
- |
27260156 |
NCIH2009 |
viability |
CAGCAAGATCACGGCGCTCTCGG |
NPC1 |
ENSG00000141458 |
0.06191058668673963 |
[484] |
[688,771,654] |
0 |
hSpCas9 |
negative selection |
7835554 |
23516394 |
23516417 |
18 |
+ |
27260156 |
NCIH2009 |
viability |
TTCCGAAAGAGACATCGCAATGG |
NPC1 |
ENSG00000141458 |
0.8924401921173946 |
[73] |
[231,156,194] |
9 |
hSpCas9 |
negative selection |
7835555 |
23515862 |
23515885 |
18 |
- |
27260156 |
NCIH2009 |
viability |
AGTTTCAGACTCCGTTTCTCTGG |
NPC1 |
ENSG00000141458 |
0.10932161626800219 |
[654] |
[1012,929,1022] |
1 |
hSpCas9 |
negative selection |
7835556 |
23557139 |
23557162 |
18 |
+ |
27260156 |
NCIH2009 |
viability |
AAAAGCTATATTGCTATCGATGG |
NPC1 |
ENSG00000141458 |
-0.04151190617442635 |
[780] |
[1078,982,1121] |
0 |
hSpCas9 |
negative selection |
7862302 |
23568840 |
23568863 |
18 |
- |
27260156 |
NCIH2009 |
viability |
AAAGAGTTACAATACTACGTCGG |
NPC1 |
ENSG00000141458 |
-0.9087282793918999 |
[297] |
[291,266,118] |
-8 |
hSpCas9 |
negative selection |
7862303 |
23561444 |
23561467 |
18 |
+ |
27260156 |
NCIH2009 |
viability |
CGTCAGCGTCCTTCCCACACAGG |
NPC1 |
ENSG00000141458 |
0.32240731166487757 |
[26] |
[53,34,53] |
4 |
hSpCas9 |
negative selection |
7862304 |
23516396 |
23516419 |
18 |
- |
27260156 |
NCIH2009 |
viability |
AGCCATTGCGATGTCTCTTTCGG |
NPC1 |
ENSG00000141458 |
0.49315364594955124 |
[873] |
[1553,1924,1637] |
6 |
hSpCas9 |
negative selection |
7899836 |
23561477 |
23561500 |
18 |
- |
27260156 |
NCIH2009 |
viability |
GGCCCCCTCAAGTAATGACAAGG |
NPC1 |
ENSG00000141458 |
-0.20999141663297072 |
[307] |
[305,394,400] |
-3 |
hSpCas9 |
negative selection |
7926559 |
23557116 |
23557139 |
18 |
- |
27260156 |
NCIH2009 |
viability |
TCTGTTAATGCAAGTGACAAAGG |
NPC1 |
ENSG00000141458 |
-0.3701279564566108 |
[686] |
[925,572,766] |
-5 |
hSpCas9 |
negative selection |
7926560 |
23568921 |
23568944 |
18 |
+ |
27260156 |
NCIH2009 |
viability |
TTCAAAAACTGACTCTGTCGAGG |
NPC1 |
ENSG00000141458 |
0.1844577039149049 |
[203] |
[278,282,400] |
2 |
hSpCas9 |
negative selection |
7926561 |
23515929 |
23515952 |
18 |
- |
27260156 |
NCIH1373 |
viability |
CAGCAAGATCACGGCGCTCTCGG |
NPC1 |
ENSG00000141458 |
0.30759183909501675 |
[484] |
[1202,611,460,129] |
3 |
hSpCas9 |
negative selection |
7956805 |
23516394 |
23516417 |
18 |
+ |
27260156 |
NCIH1373 |
viability |
TTCCGAAAGAGACATCGCAATGG |
NPC1 |
ENSG00000141458 |
-0.054578713617953856 |
[73] |
[31,65,168,10] |
0 |
hSpCas9 |
negative selection |
7956806 |
23515862 |
23515885 |
18 |
- |
27260156 |
NCIH1373 |
viability |
AGTTTCAGACTCCGTTTCTCTGG |
NPC1 |
ENSG00000141458 |
0.533972268412871 |
[654] |
[1370,645,1305,264] |
5 |
hSpCas9 |
negative selection |
7956807 |
23557139 |
23557162 |
18 |
+ |
27260156 |
NCIH1373 |
viability |
AAAAGCTATATTGCTATCGATGG |
NPC1 |
ENSG00000141458 |
0.5756263964135181 |
[780] |
[1749,958,1475,293] |
5 |
hSpCas9 |
negative selection |
7983553 |
23568840 |
23568863 |
18 |
- |
27260156 |
NCIH1373 |
viability |
AAAGAGTTACAATACTACGTCGG |
NPC1 |
ENSG00000141458 |
-0.8847018734559889 |
[297] |
[193,115,223,51] |
-7 |
hSpCas9 |
negative selection |
7983554 |
23561444 |
23561467 |
18 |
+ |
27260156 |
NCIH1373 |
viability |
CGTCAGCGTCCTTCCCACACAGG |
NPC1 |
ENSG00000141458 |
-0.2407667185022655 |
[26] |
[3,13,40,10] |
-2 |
hSpCas9 |
negative selection |
7983555 |
23516396 |
23516419 |
18 |
- |
27260156 |
NCIH1373 |
viability |
AGCCATTGCGATGTCTCTTTCGG |
NPC1 |
ENSG00000141458 |
1.2243040781386685 |
[873] |
[1751,2893,2368,513] |
9 |
hSpCas9 |
negative selection |
8021087 |
23561477 |
23561500 |
18 |
- |
27260156 |
NCIH1373 |
viability |
GGCCCCCTCAAGTAATGACAAGG |
NPC1 |
ENSG00000141458 |
-0.4604166582188862 |
[307] |
[236,264,178,84] |
-4 |
hSpCas9 |
negative selection |
8047810 |
23557116 |
23557139 |
18 |
- |
27260156 |
NCIH1373 |
viability |
TCTGTTAATGCAAGTGACAAAGG |
NPC1 |
ENSG00000141458 |
-0.0703542369322856 |
[686] |
[722,755,645,211] |
0 |
hSpCas9 |
negative selection |
8047811 |
23568921 |
23568944 |
18 |
+ |
27260156 |
NCIH1373 |
viability |
TTCAAAAACTGACTCTGTCGAGG |
NPC1 |
ENSG00000141458 |
1.055599510347634 |
[203] |
[652,217,534,144] |
9 |
hSpCas9 |
negative selection |
8047812 |
23515929 |
23515952 |
18 |
- |
27260156 |
PATU8902 |
viability |
CAGCAAGATCACGGCGCTCTCGG |
NPC1 |
ENSG00000141458 |
0.20850554245033312 |
[484] |
[573,813,521,1342] |
2 |
hSpCas9 |
negative selection |
8078056 |
23516394 |
23516417 |
18 |
+ |
27260156 |
PATU8902 |
viability |
TTCCGAAAGAGACATCGCAATGG |
NPC1 |
ENSG00000141458 |
0.0774461794120942 |
[73] |
[80,109,66,197] |
0 |
hSpCas9 |
negative selection |
8078057 |
23515862 |
23515885 |
18 |
- |
27260156 |
PATU8902 |
viability |
AGTTTCAGACTCCGTTTCTCTGG |
NPC1 |
ENSG00000141458 |
0.43906730122045357 |
[654] |
[949,1601,889,1637] |
4 |
hSpCas9 |
negative selection |
8078058 |
23557139 |
23557162 |
18 |
+ |
27260156 |
PATU8902 |
viability |
AAAAGCTATATTGCTATCGATGG |
NPC1 |
ENSG00000141458 |
0.35585165035342226 |
[780] |
[1781,792,831,2409] |
3 |
hSpCas9 |
negative selection |
8104804 |
23568840 |
23568863 |
18 |
- |
27260156 |
PATU8902 |
viability |
AAAGAGTTACAATACTACGTCGG |
NPC1 |
ENSG00000141458 |
-0.05283200757912909 |
[297] |
[553,178,220,725] |
0 |
hSpCas9 |
negative selection |
8104805 |
23561444 |
23561467 |
18 |
+ |
27260156 |
PATU8902 |
viability |
CGTCAGCGTCCTTCCCACACAGG |
NPC1 |
ENSG00000141458 |
2.261166361473758 |
[26] |
[31,337,128,243] |
9 |
hSpCas9 |
negative selection |
8104806 |
23516396 |
23516419 |
18 |
- |
27260156 |
PATU8902 |
viability |
AGCCATTGCGATGTCTCTTTCGG |
NPC1 |
ENSG00000141458 |
0.7281784984352523 |
[873] |
[1768,2262,1660,2511] |
7 |
hSpCas9 |
negative selection |
8142338 |
23561477 |
23561500 |
18 |
- |
27260156 |
PATU8902 |
viability |
GGCCCCCTCAAGTAATGACAAGG |
NPC1 |
ENSG00000141458 |
0.55237361306152 |
[307] |
[325,768,574,890] |
6 |
hSpCas9 |
negative selection |
8169061 |
23557116 |
23557139 |
18 |
- |
27260156 |
PATU8902 |
viability |
TCTGTTAATGCAAGTGACAAAGG |
NPC1 |
ENSG00000141458 |
0.43641459601446086 |
[686] |
[1527,1236,1047,1432] |
4 |
hSpCas9 |
negative selection |
8169062 |
23568921 |
23568944 |
18 |
+ |
27260156 |
PATU8902 |
viability |
TTCAAAAACTGACTCTGTCGAGG |
NPC1 |
ENSG00000141458 |
0.35955262469331883 |
[203] |
[172,370,428,481] |
3 |
hSpCas9 |
negative selection |
8169063 |
23515929 |
23515952 |
18 |
- |
27260156 |
PANC1 |
viability |
CAGCAAGATCACGGCGCTCTCGG |
NPC1 |
ENSG00000141458 |
-0.10165665994299619 |
[484] |
[369,452,455,296] |
-2 |
hSpCas9 |
negative selection |
8199307 |
23516394 |
23516417 |
18 |
+ |
27260156 |
PANC1 |
viability |
TTCCGAAAGAGACATCGCAATGG |
NPC1 |
ENSG00000141458 |
-0.9958289654471226 |
[73] |
[23,34,24,41] |
-8 |
hSpCas9 |
negative selection |
8199308 |
23515862 |
23515885 |
18 |
- |
27260156 |
PANC1 |
viability |
AGTTTCAGACTCCGTTTCTCTGG |
NPC1 |
ENSG00000141458 |
0.36781583330607315 |
[654] |
[546,849,754,762] |
6 |
hSpCas9 |
negative selection |
8199309 |
23557139 |
23557162 |
18 |
+ |
27260156 |
PANC1 |
viability |
AAAAGCTATATTGCTATCGATGG |
NPC1 |
ENSG00000141458 |
-0.11122092632007807 |
[780] |
[510,820,644,551] |
-2 |
hSpCas9 |
negative selection |
8226055 |
23568840 |
23568863 |
18 |
- |
27260156 |
PANC1 |
viability |
AAAGAGTTACAATACTACGTCGG |
NPC1 |
ENSG00000141458 |
-0.3583798637152714 |
[297] |
[228,318,155,126] |
-5 |
hSpCas9 |
negative selection |
8226056 |
23561444 |
23561467 |
18 |
+ |
27260156 |
PANC1 |
viability |
CGTCAGCGTCCTTCCCACACAGG |
NPC1 |
ENSG00000141458 |
0.7597280532538866 |
[26] |
[20,53,52,32] |
9 |
hSpCas9 |
negative selection |
8226057 |
23516396 |
23516419 |
18 |
- |
27260156 |
PANC1 |
viability |
AGCCATTGCGATGTCTCTTTCGG |
NPC1 |
ENSG00000141458 |
0.49676410146479066 |
[873] |
[996,1488,1247,645] |
7 |
hSpCas9 |
negative selection |
8263589 |
23561477 |
23561500 |
18 |
- |
27260156 |
PANC1 |
viability |
GGCCCCCTCAAGTAATGACAAGG |
NPC1 |
ENSG00000141458 |
-0.40483280878662 |
[307] |
[241,297,152,132] |
-6 |
hSpCas9 |
negative selection |
8290312 |
23557116 |
23557139 |
18 |
- |
27260156 |
PANC1 |
viability |
TCTGTTAATGCAAGTGACAAAGG |
NPC1 |
ENSG00000141458 |
-0.1993898877268206 |
[686] |
[550,723,486,353] |
-3 |
hSpCas9 |
negative selection |
8290313 |
23568921 |
23568944 |
18 |
+ |
27260156 |
PANC1 |
viability |
TTCAAAAACTGACTCTGTCGAGG |
NPC1 |
ENSG00000141458 |
-0.17284994006113363 |
[203] |
[135,302,179,48] |
-3 |
hSpCas9 |
negative selection |
8290314 |
23515929 |
23515952 |
18 |
- |
27260156 |
PANC0813 |
viability |
CAGCAAGATCACGGCGCTCTCGG |
NPC1 |
ENSG00000141458 |
-0.43042154766429075 |
[484] |
[448,441,301,494] |
-6 |
hSpCas9 |
negative selection |
8320558 |
23516394 |
23516417 |
18 |
+ |
27260156 |
PANC0813 |
viability |
TTCCGAAAGAGACATCGCAATGG |
NPC1 |
ENSG00000141458 |
1.0235783375588912 |
[73] |
[209,111,110,270] |
9 |
hSpCas9 |
negative selection |
8320559 |
23515862 |
23515885 |
18 |
- |
27260156 |
PANC0813 |
viability |
AGTTTCAGACTCCGTTTCTCTGG |
NPC1 |
ENSG00000141458 |
0.01817354916828895 |
[654] |
[768,743,846,755] |
0 |
hSpCas9 |
negative selection |
8320560 |
23557139 |
23557162 |
18 |
+ |
27260156 |
PANC0813 |
viability |
AAAAGCTATATTGCTATCGATGG |
NPC1 |
ENSG00000141458 |
-0.258405726596311 |
[780] |
[1072,743,670,614] |
-4 |
hSpCas9 |
negative selection |
8347306 |
23568840 |
23568863 |
18 |
- |
27260156 |
PANC0813 |
viability |
AAAGAGTTACAATACTACGTCGG |
NPC1 |
ENSG00000141458 |
-0.831714777369749 |
[297] |
[184,234,148,214] |
-8 |
hSpCas9 |
negative selection |
8347307 |
23561444 |
23561467 |
18 |
+ |
27260156 |
PANC0813 |
viability |
CGTCAGCGTCCTTCCCACACAGG |
NPC1 |
ENSG00000141458 |
-0.2153777774879746 |
[26] |
[44,14,8,40] |
-3 |
hSpCas9 |
negative selection |
8347308 |
23516396 |
23516419 |
18 |
- |
27260156 |
PANC0813 |
viability |
AGCCATTGCGATGTCTCTTTCGG |
NPC1 |
ENSG00000141458 |
0.29807728616771956 |
[873] |
[1664,1092,1160,1169] |
5 |
hSpCas9 |
negative selection |
8384840 |
23561477 |
23561500 |
18 |
- |
27260156 |
PANC0813 |
viability |
GGCCCCCTCAAGTAATGACAAGG |
NPC1 |
ENSG00000141458 |
-0.7488620695934822 |
[307] |
[207,103,405,146] |
-8 |
hSpCas9 |
negative selection |
8411563 |
23557116 |
23557139 |
18 |
- |
27260156 |
PANC0813 |
viability |
TCTGTTAATGCAAGTGACAAAGG |
NPC1 |
ENSG00000141458 |
-0.5963077087113802 |
[686] |
[564,516,554,501] |
-7 |
hSpCas9 |
negative selection |
8411564 |
23568921 |
23568944 |
18 |
+ |
27260156 |
PANC0813 |
viability |
TTCAAAAACTGACTCTGTCGAGG |
NPC1 |
ENSG00000141458 |
-0.01332433251746501 |
[203] |
[242,252,289,167] |
0 |
hSpCas9 |
negative selection |
8411565 |
23515929 |
23515952 |
18 |
- |
27260156 |
RDES |
viability |
CAGCAAGATCACGGCGCTCTCGG |
NPC1 |
ENSG00000141458 |
0.3681569273933206 |
[484] |
[526,664,820,928] |
6 |
hSpCas9 |
negative selection |
8441809 |
23516394 |
23516417 |
18 |
+ |
27260156 |
RDES |
viability |
TTCCGAAAGAGACATCGCAATGG |
NPC1 |
ENSG00000141458 |
0.060627611843286466 |
[73] |
[51,118,133,47] |
1 |
hSpCas9 |
negative selection |
8441810 |
23515862 |
23515885 |
18 |
- |
27260156 |
RDES |
viability |
AGTTTCAGACTCCGTTTCTCTGG |
NPC1 |
ENSG00000141458 |
0.2704104141649757 |
[654] |
[683,724,961,1377] |
4 |
hSpCas9 |
negative selection |
8441811 |
23557139 |
23557162 |
18 |
+ |
27260156 |
RDES |
viability |
AAAAGCTATATTGCTATCGATGG |
NPC1 |
ENSG00000141458 |
-0.3264662507046318 |
[780] |
[537,638,770,985] |
-5 |
hSpCas9 |
negative selection |
8468557 |
23568840 |
23568863 |
18 |
- |
27260156 |
RDES |
viability |
AAAGAGTTACAATACTACGTCGG |
NPC1 |
ENSG00000141458 |
-0.2765539920958574 |
[297] |
[281,261,207,384] |
-5 |
hSpCas9 |
negative selection |
8468558 |
23561444 |
23561467 |
18 |
+ |
27260156 |
RDES |
viability |
CGTCAGCGTCCTTCCCACACAGG |
NPC1 |
ENSG00000141458 |
0.4712735695546795 |
[26] |
[46,33,59,27] |
7 |
hSpCas9 |
negative selection |
8468559 |
23516396 |
23516419 |
18 |
- |
27260156 |
RDES |
viability |
AGCCATTGCGATGTCTCTTTCGG |
NPC1 |
ENSG00000141458 |
0.6145554944782702 |
[873] |
[1308,1394,1817,1681] |
8 |
hSpCas9 |
negative selection |
8506091 |
23561477 |
23561500 |
18 |
- |
27260156 |
RDES |
viability |
GGCCCCCTCAAGTAATGACAAGG |
NPC1 |
ENSG00000141458 |
-0.21383120292703395 |
[307] |
[266,266,337,361] |
-4 |
hSpCas9 |
negative selection |
8532814 |
23557116 |
23557139 |
18 |
- |
27260156 |
RDES |
viability |
TCTGTTAATGCAAGTGACAAAGG |
NPC1 |
ENSG00000141458 |
-0.13989964681126849 |
[686] |
[546,644,739,1003] |
-2 |
hSpCas9 |
negative selection |
8532815 |
23568921 |
23568944 |
18 |
+ |
27260156 |
RDES |
viability |
TTCAAAAACTGACTCTGTCGAGG |
NPC1 |
ENSG00000141458 |
0.23783293865822375 |
[203] |
[212,325,295,271] |
4 |
hSpCas9 |
negative selection |
8532816 |
23515929 |
23515952 |
18 |
- |
27260156 |
PC3 |
viability |
CAGCAAGATCACGGCGCTCTCGG |
NPC1 |
ENSG00000141458 |
-0.09909843372759337 |
[484] |
[276,421,759,503] |
-2 |
hSpCas9 |
negative selection |
8563060 |
23516394 |
23516417 |
18 |
+ |
27260156 |
PC3 |
viability |
TTCCGAAAGAGACATCGCAATGG |
NPC1 |
ENSG00000141458 |
0.9576578093348038 |
[73] |
[70,78,517,72] |
9 |
hSpCas9 |
negative selection |
8563061 |
23515862 |
23515885 |
18 |
- |
27260156 |
PC3 |
viability |
AGTTTCAGACTCCGTTTCTCTGG |
NPC1 |
ENSG00000141458 |
0.03596358471806671 |
[654] |
[452,492,1294,718] |
0 |
hSpCas9 |
negative selection |
8563062 |
23557139 |
23557162 |
18 |
+ |
27260156 |
PC3 |
viability |
AAAAGCTATATTGCTATCGATGG |
NPC1 |
ENSG00000141458 |
-0.23264200943655233 |
[780] |
[348,653,1249,710] |
-5 |
hSpCas9 |
negative selection |
8589808 |
23568840 |
23568863 |
18 |
- |
27260156 |
PC3 |
viability |
AAAGAGTTACAATACTACGTCGG |
NPC1 |
ENSG00000141458 |
-0.5009629728248776 |
[297] |
[91,246,267,292] |
-8 |
hSpCas9 |
negative selection |
8589809 |
23561444 |
23561467 |
18 |
+ |
27260156 |
PC3 |
viability |
CGTCAGCGTCCTTCCCACACAGG |
NPC1 |
ENSG00000141458 |
1.5737016541102857 |
[26] |
[104,43,36,93] |
9 |
hSpCas9 |
negative selection |
8589810 |
23516396 |
23516419 |
18 |
- |
27260156 |
PC3 |
viability |
AGCCATTGCGATGTCTCTTTCGG |
NPC1 |
ENSG00000141458 |
0.18665116597665354 |
[873] |
[713,804,1887,929] |
4 |
hSpCas9 |
negative selection |
8627342 |
23561477 |
23561500 |
18 |
- |
27260156 |
PC3 |
viability |
GGCCCCCTCAAGTAATGACAAGG |
NPC1 |
ENSG00000141458 |
-0.47907249966829135 |
[307] |
[186,200,409,140] |
-8 |
hSpCas9 |
negative selection |
8654065 |
23557116 |
23557139 |
18 |
- |
27260156 |
PC3 |
viability |
TCTGTTAATGCAAGTGACAAAGG |
NPC1 |
ENSG00000141458 |
0.0064839313448636915 |
[686] |
[409,603,1366,698] |
0 |
hSpCas9 |
negative selection |
8654066 |
23568921 |
23568944 |
18 |
+ |
27260156 |
PC3 |
viability |
TTCAAAAACTGACTCTGTCGAGG |
NPC1 |
ENSG00000141458 |
0.16530266829849838 |
[203] |
[137,187,485,220] |
3 |
hSpCas9 |
negative selection |
8654067 |
23515929 |
23515952 |
18 |
- |
27260156 |
PATU8988T |
viability |
CAGCAAGATCACGGCGCTCTCGG |
NPC1 |
ENSG00000141458 |
0.12630534715391475 |
[484] |
[347,557,520,632] |
2 |
hSpCas9 |
negative selection |
8684311 |
23516394 |
23516417 |
18 |
+ |
27260156 |
PATU8988T |
viability |
TTCCGAAAGAGACATCGCAATGG |
NPC1 |
ENSG00000141458 |
-0.7890146117507757 |
[73] |
[39,62,40,21] |
-8 |
hSpCas9 |
negative selection |
8684312 |
23515862 |
23515885 |
18 |
- |
27260156 |
PATU8988T |
viability |
AGTTTCAGACTCCGTTTCTCTGG |
NPC1 |
ENSG00000141458 |
0.39952160932271963 |
[654] |
[702,962,997,671] |
6 |
hSpCas9 |
negative selection |
8684313 |
23557139 |
23557162 |
18 |
+ |
27260156 |
PATU8988T |
viability |
AAAAGCTATATTGCTATCGATGG |
NPC1 |
ENSG00000141458 |
0.1555744670751802 |
[780] |
[852,730,1041,712] |
2 |
hSpCas9 |
negative selection |
8711059 |
23568840 |
23568863 |
18 |
- |
27260156 |
PATU8988T |
viability |
AAAGAGTTACAATACTACGTCGG |
NPC1 |
ENSG00000141458 |
1.0988966650748204 |
[297] |
[778,537,437,714] |
9 |
hSpCas9 |
negative selection |
8711060 |
23561444 |
23561467 |
18 |
+ |
27260156 |
PATU8988T |
viability |
CGTCAGCGTCCTTCCCACACAGG |
NPC1 |
ENSG00000141458 |
2.204088497202397 |
[26] |
[62,77,268,59] |
9 |
hSpCas9 |
negative selection |
8711061 |
23516396 |
23516419 |
18 |
- |
27260156 |
PATU8988T |
viability |
AGCCATTGCGATGTCTCTTTCGG |
NPC1 |
ENSG00000141458 |
0.6664203123591824 |
[873] |
[1004,1520,1234,1642] |
9 |
hSpCas9 |
negative selection |
8748593 |
23561477 |
23561500 |
18 |
- |
27260156 |
PATU8988T |
viability |
GGCCCCCTCAAGTAATGACAAGG |
NPC1 |
ENSG00000141458 |
1.7187320148377316 |
[307] |
[1379,555,609,1368] |
9 |
hSpCas9 |
negative selection |
8775316 |
23557116 |
23557139 |
18 |
- |
27260156 |
PATU8988T |
viability |
TCTGTTAATGCAAGTGACAAAGG |
NPC1 |
ENSG00000141458 |
1.2618578653410646 |
[686] |
[1548,1356,1999,1419] |
9 |
hSpCas9 |
negative selection |
8775317 |
23568921 |
23568944 |
18 |
+ |
27260156 |
PATU8988T |
viability |
TTCAAAAACTGACTCTGTCGAGG |
NPC1 |
ENSG00000141458 |
0.48757891634075956 |
[203] |
[347,192,266,290] |
7 |
hSpCas9 |
negative selection |
8775318 |
23515929 |
23515952 |
18 |
- |
27260156 |
T47D |
viability |
CAGCAAGATCACGGCGCTCTCGG |
NPC1 |
ENSG00000141458 |
0.40009113710373223 |
[484] |
[667,882,611,810] |
8 |
hSpCas9 |
negative selection |
8805562 |
23516394 |
23516417 |
18 |
+ |
27260156 |
T47D |
viability |
TTCCGAAAGAGACATCGCAATGG |
NPC1 |
ENSG00000141458 |
0.0008753116368440672 |
[73] |
[57,75,87,124] |
0 |
hSpCas9 |
negative selection |
8805563 |
23515862 |
23515885 |
18 |
- |
27260156 |
T47D |
viability |
AGTTTCAGACTCCGTTTCTCTGG |
NPC1 |
ENSG00000141458 |
0.21190940132895864 |
[654] |
[865,924,808,933] |
4 |
hSpCas9 |
negative selection |
8805564 |
23557139 |
23557162 |
18 |
+ |
27260156 |
T47D |
viability |
AAAAGCTATATTGCTATCGATGG |
NPC1 |
ENSG00000141458 |
-0.12040570642027681 |
[780] |
[890,877,818,753] |
-3 |
hSpCas9 |
negative selection |
8832310 |
23568840 |
23568863 |
18 |
- |
27260156 |
T47D |
viability |
AAAGAGTTACAATACTACGTCGG |
NPC1 |
ENSG00000141458 |
-0.4976897842847813 |
[297] |
[302,256,233,186] |
-8 |
hSpCas9 |
negative selection |
8832311 |
23561444 |
23561467 |
18 |
+ |
27260156 |
T47D |
viability |
CGTCAGCGTCCTTCCCACACAGG |
NPC1 |
ENSG00000141458 |
0.5441443759373659 |
[26] |
[60,44,27,49] |
9 |
hSpCas9 |
negative selection |
8832312 |
23516396 |
23516419 |
18 |
- |
27260156 |
T47D |
viability |
AGCCATTGCGATGTCTCTTTCGG |
NPC1 |
ENSG00000141458 |
0.4330710124334546 |
[873] |
[1357,1383,1425,1326] |
8 |
hSpCas9 |
negative selection |
8869844 |
23561477 |
23561500 |
18 |
- |
27260156 |
T47D |
viability |
GGCCCCCTCAAGTAATGACAAGG |
NPC1 |
ENSG00000141458 |
-0.06150226128747405 |
[307] |
[309,399,288,372] |
-1 |
hSpCas9 |
negative selection |
8896567 |
23557116 |
23557139 |
18 |
- |
27260156 |
T47D |
viability |
TCTGTTAATGCAAGTGACAAAGG |
NPC1 |
ENSG00000141458 |
0.021965342273095434 |
[686] |
[768,732,837,919] |
0 |
hSpCas9 |
negative selection |
8896568 |
23568921 |
23568944 |
18 |
+ |
27260156 |
T47D |
viability |
TTCAAAAACTGACTCTGTCGAGG |
NPC1 |
ENSG00000141458 |
0.22800219196916338 |
[203] |
[295,278,251,286] |
5 |
hSpCas9 |
negative selection |
8896569 |
23515929 |
23515952 |
18 |
- |
27260156 |
SU8686 |
viability |
CAGCAAGATCACGGCGCTCTCGG |
NPC1 |
ENSG00000141458 |
0.27444173791050697 |
[484] |
[554,533,547,714] |
4 |
hSpCas9 |
negative selection |
8926813 |
23516394 |
23516417 |
18 |
+ |
27260156 |
SU8686 |
viability |
TTCCGAAAGAGACATCGCAATGG |
NPC1 |
ENSG00000141458 |
0.7853982177785765 |
[73] |
[115,136,153,92] |
9 |
hSpCas9 |
negative selection |
8926814 |
23515862 |
23515885 |
18 |
- |
27260156 |
SU8686 |
viability |
AGTTTCAGACTCCGTTTCTCTGG |
NPC1 |
ENSG00000141458 |
0.14135766640018343 |
[654] |
[711,600,667,926] |
2 |
hSpCas9 |
negative selection |
8926815 |
23557139 |
23557162 |
18 |
+ |
27260156 |
SU8686 |
viability |
AAAAGCTATATTGCTATCGATGG |
NPC1 |
ENSG00000141458 |
0.09026043319011157 |
[780] |
[570,805,842,1156] |
1 |
hSpCas9 |
negative selection |
8953561 |
23568840 |
23568863 |
18 |
- |
27260156 |
SU8686 |
viability |
AAAGAGTTACAATACTACGTCGG |
NPC1 |
ENSG00000141458 |
-0.10571510267301398 |
[297] |
[248,258,247,357] |
-2 |
hSpCas9 |
negative selection |
8953562 |
23561444 |
23561467 |
18 |
+ |
27260156 |
SU8686 |
viability |
CGTCAGCGTCCTTCCCACACAGG |
NPC1 |
ENSG00000141458 |
0.9812440676111023 |
[26] |
[28,66,26,94] |
9 |
hSpCas9 |
negative selection |
8953563 |
23516396 |
23516419 |
18 |
- |
27260156 |
SU8686 |
viability |
AGCCATTGCGATGTCTCTTTCGG |
NPC1 |
ENSG00000141458 |
0.4228560917976224 |
[873] |
[1013,1184,1078,1411] |
7 |
hSpCas9 |
negative selection |
8991095 |
23561477 |
23561500 |
18 |
- |
27260156 |
SU8686 |
viability |
GGCCCCCTCAAGTAATGACAAGG |
NPC1 |
ENSG00000141458 |
-0.21729666018399152 |
[307] |
[257,208,222,384] |
-4 |
hSpCas9 |
negative selection |
9017818 |
23557116 |
23557139 |
18 |
- |
27260156 |
SU8686 |
viability |
TCTGTTAATGCAAGTGACAAAGG |
NPC1 |
ENSG00000141458 |
0.17245838172624595 |
[686] |
[544,692,1017,866] |
3 |
hSpCas9 |
negative selection |
9017819 |
23568921 |
23568944 |
18 |
+ |
27260156 |
SU8686 |
viability |
TTCAAAAACTGACTCTGTCGAGG |
NPC1 |
ENSG00000141458 |
0.28158872745187735 |
[203] |
[223,176,279,325] |
5 |
hSpCas9 |
negative selection |
9017820 |
23515929 |
23515952 |
18 |
- |
27260156 |
SKES1 |
viability |
CAGCAAGATCACGGCGCTCTCGG |
NPC1 |
ENSG00000141458 |
0.14352424276897768 |
[484] |
[569,630,475,478] |
3 |
hSpCas9 |
negative selection |
9048064 |
23516394 |
23516417 |
18 |
+ |
27260156 |
SKES1 |
viability |
TTCCGAAAGAGACATCGCAATGG |
NPC1 |
ENSG00000141458 |
0.06494577338872443 |
[73] |
[110,63,75,61] |
1 |
hSpCas9 |
negative selection |
9048065 |
23515862 |
23515885 |
18 |
- |
27260156 |
SKES1 |
viability |
AGTTTCAGACTCCGTTTCTCTGG |
NPC1 |
ENSG00000141458 |
0.18492742868712542 |
[654] |
[1068,787,489,677] |
4 |
hSpCas9 |
negative selection |
9048066 |
23557139 |
23557162 |
18 |
+ |
27260156 |
SKES1 |
viability |
AAAAGCTATATTGCTATCGATGG |
NPC1 |
ENSG00000141458 |
-0.5400977242422814 |
[780] |
[529,434,535,613] |
-8 |
hSpCas9 |
negative selection |
9074812 |
23568840 |
23568863 |
18 |
- |
27260156 |
SKES1 |
viability |
AAAGAGTTACAATACTACGTCGG |
NPC1 |
ENSG00000141458 |
-0.4561342593012515 |
[297] |
[243,230,225,173] |
-7 |
hSpCas9 |
negative selection |
9074813 |
23561444 |
23561467 |
18 |
+ |
27260156 |
SKES1 |
viability |
CGTCAGCGTCCTTCCCACACAGG |
NPC1 |
ENSG00000141458 |
0.9307240156964176 |
[26] |
[114,56,31,14] |
9 |
hSpCas9 |
negative selection |
9074814 |
23516396 |
23516419 |
18 |
- |
27260156 |
SKES1 |
viability |
AGCCATTGCGATGTCTCTTTCGG |
NPC1 |
ENSG00000141458 |
0.21082326545286645 |
[873] |
[1139,942,939,1012] |
4 |
hSpCas9 |
negative selection |
9112346 |
23561477 |
23561500 |
18 |
- |
27260156 |
SKES1 |
viability |
GGCCCCCTCAAGTAATGACAAGG |
NPC1 |
ENSG00000141458 |
0.03562685154945855 |
[307] |
[374,176,367,325] |
0 |
hSpCas9 |
negative selection |
9139069 |
23557116 |
23557139 |
18 |
- |
27260156 |
SKES1 |
viability |
TCTGTTAATGCAAGTGACAAAGG |
NPC1 |
ENSG00000141458 |
-0.0015866396035161268 |
[686] |
[887,686,669,532] |
0 |
hSpCas9 |
negative selection |
9139070 |
23568921 |
23568944 |
18 |
+ |
27260156 |
SKES1 |
viability |
TTCAAAAACTGACTCTGTCGAGG |
NPC1 |
ENSG00000141458 |
-0.05797071696545353 |
[203] |
[190,211,178,198] |
-1 |
hSpCas9 |
negative selection |
9139071 |
23515929 |
23515952 |
18 |
- |
27260156 |
TOV112D |
viability |
CAGCAAGATCACGGCGCTCTCGG |
NPC1 |
ENSG00000141458 |
0.11080729654146634 |
[484] |
[561,820,469,325] |
2 |
hSpCas9 |
negative selection |
9169315 |
23516394 |
23516417 |
18 |
+ |
27260156 |
TOV112D |
viability |
TTCCGAAAGAGACATCGCAATGG |
NPC1 |
ENSG00000141458 |
0.9557231423632475 |
[73] |
[197,69,142,149] |
9 |
hSpCas9 |
negative selection |
9169316 |
23515862 |
23515885 |
18 |
- |
27260156 |
TOV112D |
viability |
AGTTTCAGACTCCGTTTCTCTGG |
NPC1 |
ENSG00000141458 |
0.29277431832757506 |
[654] |
[716,1013,845,683] |
5 |
hSpCas9 |
negative selection |
9169317 |
23557139 |
23557162 |
18 |
+ |
27260156 |
TOV112D |
viability |
AAAAGCTATATTGCTATCGATGG |
NPC1 |
ENSG00000141458 |
-0.4986532734988677 |
[780] |
[697,792,397,399] |
-7 |
hSpCas9 |
negative selection |
9196063 |
23568840 |
23568863 |
18 |
- |
27260156 |
TOV112D |
viability |
AAAGAGTTACAATACTACGTCGG |
NPC1 |
ENSG00000141458 |
-0.6166520697727317 |
[297] |
[104,238,291,146] |
-8 |
hSpCas9 |
negative selection |
9196064 |
23561444 |
23561467 |
18 |
+ |
27260156 |
TOV112D |
viability |
CGTCAGCGTCCTTCCCACACAGG |
NPC1 |
ENSG00000141458 |
0.6642755472924682 |
[26] |
[48,51,25,46] |
9 |
hSpCas9 |
negative selection |
9196065 |
23516396 |
23516419 |
18 |
- |
27260156 |
TOV112D |
viability |
AGCCATTGCGATGTCTCTTTCGG |
NPC1 |
ENSG00000141458 |
0.3228259638342704 |
[873] |
[979,1494,1132,864] |
6 |
hSpCas9 |
negative selection |
9233597 |
23561477 |
23561500 |
18 |
- |
27260156 |
TOV112D |
viability |
GGCCCCCTCAAGTAATGACAAGG |
NPC1 |
ENSG00000141458 |
-0.2819224704404242 |
[307] |
[204,324,283,214] |
-5 |
hSpCas9 |
negative selection |
9260320 |
23557116 |
23557139 |
18 |
- |
27260156 |
TOV112D |
viability |
TCTGTTAATGCAAGTGACAAAGG |
NPC1 |
ENSG00000141458 |
0.05768868806237504 |
[686] |
[677,992,675,584] |
1 |
hSpCas9 |
negative selection |
9260321 |
23568921 |
23568944 |
18 |
+ |
27260156 |
TOV112D |
viability |
TTCAAAAACTGACTCTGTCGAGG |
NPC1 |
ENSG00000141458 |
-0.3487835198060085 |
[203] |
[64,236,142,205] |
-6 |
hSpCas9 |
negative selection |
9260322 |
23515929 |
23515952 |
18 |
- |
27260156 |
TC71 |
viability |
CAGCAAGATCACGGCGCTCTCGG |
NPC1 |
ENSG00000141458 |
-0.12168547255549783 |
[484] |
[466,391,466,592] |
-3 |
hSpCas9 |
negative selection |
9290566 |
23516394 |
23516417 |
18 |
+ |
27260156 |
TC71 |
viability |
TTCCGAAAGAGACATCGCAATGG |
NPC1 |
ENSG00000141458 |
0.25027154959435105 |
[73] |
[114,90,91,77] |
6 |
hSpCas9 |
negative selection |
9290567 |
23515862 |
23515885 |
18 |
- |
27260156 |
TC71 |
viability |
AGTTTCAGACTCCGTTTCTCTGG |
NPC1 |
ENSG00000141458 |
0.2546685610634152 |
[654] |
[845,912,826,759] |
6 |
hSpCas9 |
negative selection |
9290568 |
23557139 |
23557162 |
18 |
+ |
27260156 |
TC71 |
viability |
AAAAGCTATATTGCTATCGATGG |
NPC1 |
ENSG00000141458 |
-0.3333212984572446 |
[780] |
[622,722,621,693] |
-7 |
hSpCas9 |
negative selection |
9317314 |
23568840 |
23568863 |
18 |
- |
27260156 |
TC71 |
viability |
AAAGAGTTACAATACTACGTCGG |
NPC1 |
ENSG00000141458 |
-0.22753035786339804 |
[297] |
[335,280,263,204] |
-6 |
hSpCas9 |
negative selection |
9317315 |
23561444 |
23561467 |
18 |
+ |
27260156 |
TC71 |
viability |
CGTCAGCGTCCTTCCCACACAGG |
NPC1 |
ENSG00000141458 |
0.8791553997739827 |
[26] |
[65,60,55,27] |
9 |
hSpCas9 |
negative selection |
9317316 |
23516396 |
23516419 |
18 |
- |
27260156 |
TC71 |
viability |
AGCCATTGCGATGTCTCTTTCGG |
NPC1 |
ENSG00000141458 |
0.23238932435255422 |
[873] |
[1063,1040,986,1328] |
6 |
hSpCas9 |
negative selection |
9354848 |
23561477 |
23561500 |
18 |
- |
27260156 |
TC71 |
viability |
GGCCCCCTCAAGTAATGACAAGG |
NPC1 |
ENSG00000141458 |
-0.07689346699597355 |
[307] |
[378,229,318,322] |
-2 |
hSpCas9 |
negative selection |
9381571 |
23557116 |
23557139 |
18 |
- |
27260156 |
TC71 |
viability |
TCTGTTAATGCAAGTGACAAAGG |
NPC1 |
ENSG00000141458 |
0.048005373493258396 |
[686] |
[741,816,754,729] |
1 |
hSpCas9 |
negative selection |
9381572 |
23568921 |
23568944 |
18 |
+ |
27260156 |
TC71 |
viability |
TTCAAAAACTGACTCTGTCGAGG |
NPC1 |
ENSG00000141458 |
0.0656342472415381 |
[203] |
[202,266,210,235] |
1 |
hSpCas9 |
negative selection |
9381573 |
23515929 |
23515952 |
18 |
- |
27260156 |
TC32 |
viability |
CAGCAAGATCACGGCGCTCTCGG |
NPC1 |
ENSG00000141458 |
0.36037759463776686 |
[484] |
[599,279,756,828] |
6 |
hSpCas9 |
negative selection |
9411817 |
23516394 |
23516417 |
18 |
+ |
27260156 |
TC32 |
viability |
TTCCGAAAGAGACATCGCAATGG |
NPC1 |
ENSG00000141458 |
0.17039173205706604 |
[73] |
[49,59,147,72] |
3 |
hSpCas9 |
negative selection |
9411818 |
23515862 |
23515885 |
18 |
- |
27260156 |
TC32 |
viability |
AGTTTCAGACTCCGTTTCTCTGG |
NPC1 |
ENSG00000141458 |
0.3622468308051404 |
[654] |
[621,760,1041,764] |
6 |
hSpCas9 |
negative selection |
9411819 |
23557139 |
23557162 |
18 |
+ |
27260156 |
TC32 |
viability |
AAAAGCTATATTGCTATCGATGG |
NPC1 |
ENSG00000141458 |
-0.16296675948356043 |
[780] |
[634,501,889,656] |
-3 |
hSpCas9 |
negative selection |
9438565 |
23568840 |
23568863 |
18 |
- |
27260156 |
TC32 |
viability |
AAAGAGTTACAATACTACGTCGG |
NPC1 |
ENSG00000141458 |
-0.4088684171963123 |
[297] |
[234,115,354,181] |
-6 |
hSpCas9 |
negative selection |
9438566 |
23561444 |
23561467 |
18 |
+ |
27260156 |
TC32 |
viability |
CGTCAGCGTCCTTCCCACACAGG |
NPC1 |
ENSG00000141458 |
0.6640363046147977 |
[26] |
[9,52,63,33] |
9 |
hSpCas9 |
negative selection |
9438567 |
23516396 |
23516419 |
18 |
- |
27260156 |
TC32 |
viability |
AGCCATTGCGATGTCTCTTTCGG |
NPC1 |
ENSG00000141458 |
0.39922456791592953 |
[873] |
[1050,764,1366,1269] |
7 |
hSpCas9 |
negative selection |
9476099 |
23561477 |
23561500 |
18 |
- |
27260156 |
TC32 |
viability |
GGCCCCCTCAAGTAATGACAAGG |
NPC1 |
ENSG00000141458 |
-0.007628409363761746 |
[307] |
[283,220,354,312] |
0 |
hSpCas9 |
negative selection |
9502822 |
23557116 |
23557139 |
18 |
- |
27260156 |
TC32 |
viability |
TCTGTTAATGCAAGTGACAAAGG |
NPC1 |
ENSG00000141458 |
0.0938395795302902 |
[686] |
[832,439,902,648] |
1 |
hSpCas9 |
negative selection |
9502823 |
23568921 |
23568944 |
18 |
+ |
27260156 |
TC32 |
viability |
TTCAAAAACTGACTCTGTCGAGG |
NPC1 |
ENSG00000141458 |
0.40965461984611906 |
[203] |
[181,280,303,241] |
7 |
hSpCas9 |
negative selection |
9502824 |
23551665 |
23551688 |
18 |
+ |
27869803 |
HPAFII |
viability after 27 days |
CCACCAAACGTACCCAGACAAGG |
NPC1 |
ENSG00000141458 |
-0.3442627869419952 |
[910] |
[523,254,NaN] |
-3 |
hSpCas9 |
negative selection |
9564237 |
23554880 |
23554903 |
18 |
+ |
27869803 |
HPAFII |
viability after 27 days |
CGTGTTATACGGTGAAAGAGGGG |
NPC1 |
ENSG00000141458 |
-2.018069448912171 |
[546] |
[88,55,NaN] |
-8 |
hSpCas9 |
negative selection |
9564238 |
23556277 |
23556300 |
18 |
+ |
27869803 |
HPAFII |
viability after 27 days |
AAGGGTACATCAGCTCCCGAAGG |
NPC1 |
ENSG00000141458 |
-0.8604739117229645 |
[107] |
[27,33,NaN] |
-6 |
hSpCas9 |
negative selection |
9564239 |
23560324 |
23560347 |
18 |
+ |
27869803 |
HPAFII |
viability after 27 days |
AGGATCGTCCAGGGAGCAGGAGG |
NPC1 |
ENSG00000141458 |
-0.5318511642615937 |
[113] |
[59,25,NaN] |
-4 |
hSpCas9 |
negative selection |
9564240 |
23561454 |
23561477 |
18 |
+ |
27869803 |
HPAFII |
viability after 27 days |
CTTCCCACACAGGAGTCCCAGGG |
NPC1 |
ENSG00000141458 |
-0.5390466656657977 |
[200] |
[123,29,NaN] |
-4 |
hSpCas9 |
negative selection |
9564241 |
23586289 |
23586312 |
18 |
+ |
27869803 |
HPAFII |
viability after 27 days |
GCGCTGGACACAGTAGCAGCAGG |
NPC1 |
ENSG00000141458 |
0.927580454375704 |
[0] |
[0,0,NaN] |
7 |
hSpCas9 |
negative selection |
9564242 |
23551665 |
23551688 |
18 |
+ |
27869803 |
HPAFII |
viability after 15 days |
CCACCAAACGTACCCAGACAAGG |
NPC1 |
ENSG00000141458 |
-0.31598829473337364 |
[910] |
[1079,603,NaN] |
-4 |
hSpCas9 |
negative selection |
9646686 |
23554880 |
23554903 |
18 |
+ |
27869803 |
HPAFII |
viability after 15 days |
CGTGTTATACGGTGAAAGAGGGG |
NPC1 |
ENSG00000141458 |
-1.1532981872120298 |
[546] |
[341,215,NaN] |
-8 |
hSpCas9 |
negative selection |
9646687 |
23556277 |
23556300 |
18 |
+ |
27869803 |
HPAFII |
viability after 15 days |
AAGGGTACATCAGCTCCCGAAGG |
NPC1 |
ENSG00000141458 |
-2.220726530016166 |
[107] |
[35,17,NaN] |
-9 |
hSpCas9 |
negative selection |
9646688 |
23560324 |
23560347 |
18 |
+ |
27869803 |
HPAFII |
viability after 15 days |
AGGATCGTCCAGGGAGCAGGAGG |
NPC1 |
ENSG00000141458 |
-1.91159753930848 |
[113] |
[18,40,NaN] |
-9 |
hSpCas9 |
negative selection |
9646689 |
23561454 |
23561477 |
18 |
+ |
27869803 |
HPAFII |
viability after 15 days |
CTTCCCACACAGGAGTCCCAGGG |
NPC1 |
ENSG00000141458 |
-0.3302587532825255 |
[200] |
[222,139,NaN] |
-4 |
hSpCas9 |
negative selection |
9646690 |
23586289 |
23586312 |
18 |
+ |
27869803 |
HPAFII |
viability after 15 days |
GCGCTGGACACAGTAGCAGCAGG |
NPC1 |
ENSG00000141458 |
-0.10397428375416773 |
[0] |
[0,0,NaN] |
-1 |
hSpCas9 |
negative selection |
9646691 |
23551665 |
23551688 |
18 |
+ |
27869803 |
ASPC1 |
viability after 36 days |
CCACCAAACGTACCCAGACAAGG |
NPC1 |
ENSG00000141458 |
-0.12723520969623348 |
[1875] |
[582,863,394] |
-1 |
hSpCas9 |
negative selection |
9729135 |
23554880 |
23554903 |
18 |
+ |
27869803 |
ASPC1 |
viability after 36 days |
CGTGTTATACGGTGAAAGAGGGG |
NPC1 |
ENSG00000141458 |
-1.1697571475214685 |
[1352] |
[289,192,164] |
-8 |
hSpCas9 |
negative selection |
9729136 |
23556277 |
23556300 |
18 |
+ |
27869803 |
ASPC1 |
viability after 36 days |
AAGGGTACATCAGCTCCCGAAGG |
NPC1 |
ENSG00000141458 |
-0.7364189730025037 |
[167] |
[4,38,52] |
-6 |
hSpCas9 |
negative selection |
9729137 |
23560324 |
23560347 |
18 |
+ |
27869803 |
ASPC1 |
viability after 36 days |
AGGATCGTCCAGGGAGCAGGAGG |
NPC1 |
ENSG00000141458 |
-0.17847965164955903 |
[264] |
[55,92,89] |
-2 |
hSpCas9 |
negative selection |
9729138 |
23561454 |
23561477 |
18 |
+ |
27869803 |
ASPC1 |
viability after 36 days |
CTTCCCACACAGGAGTCCCAGGG |
NPC1 |
ENSG00000141458 |
0.07977521753897482 |
[427] |
[22,158,249] |
0 |
hSpCas9 |
negative selection |
9729139 |
23586289 |
23586312 |
18 |
+ |
27869803 |
ASPC1 |
viability after 36 days |
GCGCTGGACACAGTAGCAGCAGG |
NPC1 |
ENSG00000141458 |
-1.1070730883963507 |
[416] |
[96,53,56] |
-8 |
hSpCas9 |
negative selection |
9729140 |
23551665 |
23551688 |
18 |
+ |
27869803 |
PATU8988S |
viability after 35 days |
CCACCAAACGTACCCAGACAAGG |
NPC1 |
ENSG00000141458 |
-1.384170533046535 |
[1791] |
[276,275,NaN] |
-8 |
hSpCas9 |
negative selection |
9811584 |
23554880 |
23554903 |
18 |
+ |
27869803 |
PATU8988S |
viability after 35 days |
CGTGTTATACGGTGAAAGAGGGG |
NPC1 |
ENSG00000141458 |
-1.3522921874123557 |
[1219] |
[169,214,NaN] |
-8 |
hSpCas9 |
negative selection |
9811585 |
23556277 |
23556300 |
18 |
+ |
27869803 |
PATU8988S |
viability after 35 days |
AAGGGTACATCAGCTCCCGAAGG |
NPC1 |
ENSG00000141458 |
-2.1486674227935545 |
[197] |
[10,24,NaN] |
-9 |
hSpCas9 |
negative selection |
9811586 |
23560324 |
23560347 |
18 |
+ |
27869803 |
PATU8988S |
viability after 35 days |
AGGATCGTCCAGGGAGCAGGAGG |
NPC1 |
ENSG00000141458 |
-0.9539749103268302 |
[218] |
[58,31,NaN] |
-7 |
hSpCas9 |
negative selection |
9811587 |
23561454 |
23561477 |
18 |
+ |
27869803 |
PATU8988S |
viability after 35 days |
CTTCCCACACAGGAGTCCCAGGG |
NPC1 |
ENSG00000141458 |
-1.8290393566194458 |
[273] |
[56,4,NaN] |
-8 |
hSpCas9 |
negative selection |
9811588 |
23586289 |
23586312 |
18 |
+ |
27869803 |
PATU8988S |
viability after 35 days |
GCGCTGGACACAGTAGCAGCAGG |
NPC1 |
ENSG00000141458 |
-0.81761939756625 |
[375] |
[50,120,NaN] |
-7 |
hSpCas9 |
negative selection |
9811589 |
23551665 |
23551688 |
18 |
+ |
27869803 |
PATU8988S |
viability after 31 days |
CCACCAAACGTACCCAGACAAGG |
NPC1 |
ENSG00000141458 |
-0.7241687918786834 |
[1791] |
[377,501,NaN] |
-6 |
hSpCas9 |
negative selection |
9894033 |
23554880 |
23554903 |
18 |
+ |
27869803 |
PATU8988S |
viability after 31 days |
CGTGTTATACGGTGAAAGAGGGG |
NPC1 |
ENSG00000141458 |
-1.3787615624990353 |
[1219] |
[139,246,NaN] |
-8 |
hSpCas9 |
negative selection |
9894034 |
23556277 |
23556300 |
18 |
+ |
27869803 |
PATU8988S |
viability after 31 days |
AAGGGTACATCAGCTCCCGAAGG |
NPC1 |
ENSG00000141458 |
-2.373278756521004 |
[197] |
[5,26,NaN] |
-9 |
hSpCas9 |
negative selection |
9894035 |
23560324 |
23560347 |
18 |
+ |
27869803 |
PATU8988S |
viability after 31 days |
AGGATCGTCCAGGGAGCAGGAGG |
NPC1 |
ENSG00000141458 |
-0.7724988173990537 |
[218] |
[51,49,NaN] |
-7 |
hSpCas9 |
negative selection |
9894036 |
23561454 |
23561477 |
18 |
+ |
27869803 |
PATU8988S |
viability after 31 days |
CTTCCCACACAGGAGTCCCAGGG |
NPC1 |
ENSG00000141458 |
-2.086685102359653 |
[273] |
[30,18,NaN] |
-9 |
hSpCas9 |
negative selection |
9894037 |
23586289 |
23586312 |
18 |
+ |
27869803 |
PATU8988S |
viability after 31 days |
GCGCTGGACACAGTAGCAGCAGG |
NPC1 |
ENSG00000141458 |
-0.8020471167458845 |
[375] |
[30,155,NaN] |
-7 |
hSpCas9 |
negative selection |
9894038 |
23551665 |
23551688 |
18 |
+ |
27869803 |
HPAFII |
viability after 35 days |
CCACCAAACGTACCCAGACAAGG |
NPC1 |
ENSG00000141458 |
-1.6921014656636837 |
[910] |
[185,93,NaN] |
-7 |
hSpCas9 |
negative selection |
9976482 |
23554880 |
23554903 |
18 |
+ |
27869803 |
HPAFII |
viability after 35 days |
CGTGTTATACGGTGAAAGAGGGG |
NPC1 |
ENSG00000141458 |
-2.726841013706574 |
[546] |
[54,26,NaN] |
-8 |
hSpCas9 |
negative selection |
9976483 |
23556277 |
23556300 |
18 |
+ |
27869803 |
HPAFII |
viability after 35 days |
AAGGGTACATCAGCTCCCGAAGG |
NPC1 |
ENSG00000141458 |
-1.1988075662666406 |
[107] |
[12,35,NaN] |
-6 |
hSpCas9 |
negative selection |
9976484 |
23560324 |
23560347 |
18 |
+ |
27869803 |
HPAFII |
viability after 35 days |
AGGATCGTCCAGGGAGCAGGAGG |
NPC1 |
ENSG00000141458 |
-1.7727614341812648 |
[113] |
[30,0,NaN] |
-7 |
hSpCas9 |
negative selection |
9976485 |
23561454 |
23561477 |
18 |
+ |
27869803 |
HPAFII |
viability after 35 days |
CTTCCCACACAGGAGTCCCAGGG |
NPC1 |
ENSG00000141458 |
-0.26595953760369184 |
[200] |
[157,1,NaN] |
-2 |
hSpCas9 |
negative selection |
9976486 |
23586289 |
23586312 |
18 |
+ |
27869803 |
HPAFII |
viability after 35 days |
GCGCTGGACACAGTAGCAGCAGG |
NPC1 |
ENSG00000141458 |
0.9820885529966752 |
[0] |
[0,0,NaN] |
6 |
hSpCas9 |
negative selection |
9976487 |
23551665 |
23551688 |
18 |
+ |
27869803 |
HPAFII |
viability after 31 days |
CCACCAAACGTACCCAGACAAGG |
NPC1 |
ENSG00000141458 |
-1.1276594038523624 |
[910] |
[322,136,NaN] |
-6 |
hSpCas9 |
negative selection |
10058931 |
23554880 |
23554903 |
18 |
+ |
27869803 |
HPAFII |
viability after 31 days |
CGTGTTATACGGTGAAAGAGGGG |
NPC1 |
ENSG00000141458 |
-2.1894912233943438 |
[546] |
[73,59,NaN] |
-8 |
hSpCas9 |
negative selection |
10058932 |
23556277 |
23556300 |
18 |
+ |
27869803 |
HPAFII |
viability after 31 days |
AAGGGTACATCAGCTCCCGAAGG |
NPC1 |
ENSG00000141458 |
-1.046227704265521 |
[107] |
[25,32,NaN] |
-6 |
hSpCas9 |
negative selection |
10058933 |
23560324 |
23560347 |
18 |
+ |
27869803 |
HPAFII |
viability after 31 days |
AGGATCGTCCAGGGAGCAGGAGG |
NPC1 |
ENSG00000141458 |
-2.068105899746896 |
[113] |
[20,8,NaN] |
-8 |
hSpCas9 |
negative selection |
10058934 |
23561454 |
23561477 |
18 |
+ |
27869803 |
HPAFII |
viability after 31 days |
CTTCCCACACAGGAGTCCCAGGG |
NPC1 |
ENSG00000141458 |
-0.6925253601813812 |
[200] |
[109,25,NaN] |
-4 |
hSpCas9 |
negative selection |
10058935 |
23586289 |
23586312 |
18 |
+ |
27869803 |
HPAFII |
viability after 31 days |
GCGCTGGACACAGTAGCAGCAGG |
NPC1 |
ENSG00000141458 |
0.8333711996752582 |
[0] |
[0,0,NaN] |
6 |
hSpCas9 |
negative selection |
10058936 |
23539874 |
23539897 |
18 |
- |
28162770 |
P31FUJ |
viability |
GGGCAGAACATGGTGTGCGGCGG |
NPC1 |
ENSG00000141458 |
-0.28303650693451504 |
[262] |
[253] |
-3 |
hSpCas9 |
negative selection |
10201711 |
23538563 |
23538586 |
18 |
+ |
28162770 |
P31FUJ |
viability |
GGGTTATCCGAAAGGAACATGGG |
NPC1 |
ENSG00000141458 |
0.38386915603411564 |
[104] |
[160] |
4 |
hSpCas9 |
negative selection |
10201712 |
23586301 |
23586324 |
18 |
+ |
28162770 |
P31FUJ |
viability |
GTAGCAGCAGGAGGAGGCCAAGG |
NPC1 |
ENSG00000141458 |
-0.7698302280718328 |
[73] |
[50] |
-5 |
hSpCas9 |
negative selection |
10201713 |
23560460 |
23560483 |
18 |
- |
28162770 |
P31FUJ |
viability |
AGATTTTCCAGTCCATGGGATGG |
NPC1 |
ENSG00000141458 |
1.1297678749703297 |
[209] |
[539] |
9 |
hSpCas9 |
negative selection |
10201714 |
23556277 |
23556300 |
18 |
+ |
28162770 |
P31FUJ |
viability |
AAGGGTACATCAGCTCCCGAAGG |
NPC1 |
ENSG00000141458 |
0.5018532290646267 |
[124] |
[207] |
5 |
hSpCas9 |
negative selection |
10201715 |
23556250 |
23556273 |
18 |
+ |
28162770 |
P31FUJ |
viability |
AGTATCTGTATGTCAAGCGGAGG |
NPC1 |
ENSG00000141458 |
-0.39974458118283335 |
[301] |
[268] |
-4 |
hSpCas9 |
negative selection |
10201716 |
23548068 |
23548091 |
18 |
+ |
28162770 |
P31FUJ |
viability |
GAAGGTAATCACAAGGGCAGTGG |
NPC1 |
ENSG00000141458 |
0.4987089596597194 |
[105] |
[175] |
5 |
hSpCas9 |
negative selection |
10201717 |
23548026 |
23548049 |
18 |
- |
28162770 |
P31FUJ |
viability |
ATGATACAGAGAAGCTCCAGAGG |
NPC1 |
ENSG00000141458 |
-0.24366319704614547 |
[399] |
[396] |
-2 |
hSpCas9 |
negative selection |
10201718 |
23544440 |
23544463 |
18 |
+ |
28162770 |
P31FUJ |
viability |
AATGTAGCTGAAGACACCCAAGG |
NPC1 |
ENSG00000141458 |
0.25380522432820296 |
[348] |
[488] |
2 |
hSpCas9 |
negative selection |
10201719 |
23538607 |
23538630 |
18 |
- |
28162770 |
P31FUJ |
viability |
AAGGCAAACAGAGGCCTCAGGGG |
NPC1 |
ENSG00000141458 |
0.3669270070156897 |
[323] |
[490] |
4 |
hSpCas9 |
negative selection |
10201720 |
23539874 |
23539897 |
18 |
- |
28162770 |
TF1 |
viability |
GGGCAGAACATGGTGTGCGGCGG |
NPC1 |
ENSG00000141458 |
NaN |
[NaN] |
[363] |
1 |
hSpCas9 |
negative selection |
10371077 |
23538563 |
23538586 |
18 |
+ |
28162770 |
TF1 |
viability |
GGGTTATCCGAAAGGAACATGGG |
NPC1 |
ENSG00000141458 |
NaN |
[NaN] |
[80] |
1 |
hSpCas9 |
negative selection |
10371078 |
23586301 |
23586324 |
18 |
+ |
28162770 |
TF1 |
viability |
GTAGCAGCAGGAGGAGGCCAAGG |
NPC1 |
ENSG00000141458 |
NaN |
[NaN] |
[4] |
1 |
hSpCas9 |
negative selection |
10371079 |
23560460 |
23560483 |
18 |
- |
28162770 |
TF1 |
viability |
AGATTTTCCAGTCCATGGGATGG |
NPC1 |
ENSG00000141458 |
NaN |
[NaN] |
[367] |
1 |
hSpCas9 |
negative selection |
10371080 |
23556277 |
23556300 |
18 |
+ |
28162770 |
TF1 |
viability |
AAGGGTACATCAGCTCCCGAAGG |
NPC1 |
ENSG00000141458 |
NaN |
[NaN] |
[245] |
1 |
hSpCas9 |
negative selection |
10371081 |
23556250 |
23556273 |
18 |
+ |
28162770 |
TF1 |
viability |
AGTATCTGTATGTCAAGCGGAGG |
NPC1 |
ENSG00000141458 |
NaN |
[NaN] |
[268] |
1 |
hSpCas9 |
negative selection |
10371082 |
23548068 |
23548091 |
18 |
+ |
28162770 |
TF1 |
viability |
GAAGGTAATCACAAGGGCAGTGG |
NPC1 |
ENSG00000141458 |
NaN |
[NaN] |
[115] |
1 |
hSpCas9 |
negative selection |
10371083 |
23548026 |
23548049 |
18 |
- |
28162770 |
TF1 |
viability |
ATGATACAGAGAAGCTCCAGAGG |
NPC1 |
ENSG00000141458 |
NaN |
[NaN] |
[327] |
1 |
hSpCas9 |
negative selection |
10371084 |
23544440 |
23544463 |
18 |
+ |
28162770 |
TF1 |
viability |
AATGTAGCTGAAGACACCCAAGG |
NPC1 |
ENSG00000141458 |
NaN |
[NaN] |
[474] |
1 |
hSpCas9 |
negative selection |
10371085 |
23538607 |
23538630 |
18 |
- |
28162770 |
TF1 |
viability |
AAGGCAAACAGAGGCCTCAGGGG |
NPC1 |
ENSG00000141458 |
NaN |
[NaN] |
[456] |
1 |
hSpCas9 |
negative selection |
10371086 |
23539874 |
23539897 |
18 |
- |
28162770 |
SKM1 |
viability |
GGGCAGAACATGGTGTGCGGCGG |
NPC1 |
ENSG00000141458 |
-0.23046654337736308 |
[72] |
[109] |
-2 |
hSpCas9 |
negative selection |
10540443 |
23538563 |
23538586 |
18 |
+ |
28162770 |
SKM1 |
viability |
GGGTTATCCGAAAGGAACATGGG |
NPC1 |
ENSG00000141458 |
-1.7835275502073697 |
[36] |
[18] |
-8 |
hSpCas9 |
negative selection |
10540444 |
23586301 |
23586324 |
18 |
+ |
28162770 |
SKM1 |
viability |
GTAGCAGCAGGAGGAGGCCAAGG |
NPC1 |
ENSG00000141458 |
0.4999263968653569 |
[21] |
[54] |
5 |
hSpCas9 |
negative selection |
10540445 |
23560460 |
23560483 |
18 |
- |
28162770 |
SKM1 |
viability |
AGATTTTCCAGTCCATGGGATGG |
NPC1 |
ENSG00000141458 |
-0.056466951659028486 |
[79] |
[135] |
0 |
hSpCas9 |
negative selection |
10540446 |
23556277 |
23556300 |
18 |
+ |
28162770 |
SKM1 |
viability |
AAGGGTACATCAGCTCCCGAAGG |
NPC1 |
ENSG00000141458 |
0.3019870192534479 |
[38] |
[84] |
3 |
hSpCas9 |
negative selection |
10540447 |
23556250 |
23556273 |
18 |
+ |
28162770 |
SKM1 |
viability |
AGTATCTGTATGTCAAGCGGAGG |
NPC1 |
ENSG00000141458 |
-0.17158613581223325 |
[78] |
[123] |
-1 |
hSpCas9 |
negative selection |
10540448 |
23548068 |
23548091 |
18 |
+ |
28162770 |
SKM1 |
viability |
GAAGGTAATCACAAGGGCAGTGG |
NPC1 |
ENSG00000141458 |
-0.615550820554579 |
[25] |
[29] |
-5 |
hSpCas9 |
negative selection |
10540449 |
23548026 |
23548049 |
18 |
- |
28162770 |
SKM1 |
viability |
ATGATACAGAGAAGCTCCAGAGG |
NPC1 |
ENSG00000141458 |
-1.007216570488913 |
[82] |
[72] |
-6 |
hSpCas9 |
negative selection |
10540450 |
23544440 |
23544463 |
18 |
+ |
28162770 |
SKM1 |
viability |
AATGTAGCTGAAGACACCCAAGG |
NPC1 |
ENSG00000141458 |
-0.3289616867418884 |
[80] |
[113] |
-3 |
hSpCas9 |
negative selection |
10540451 |
23538607 |
23538630 |
18 |
- |
28162770 |
SKM1 |
viability |
AAGGCAAACAGAGGCCTCAGGGG |
NPC1 |
ENSG00000141458 |
-0.8709112985029519 |
[59] |
[57] |
-6 |
hSpCas9 |
negative selection |
10540452 |
23539874 |
23539897 |
18 |
- |
28162770 |
SKM1 |
viability |
GGGCAGAACATGGTGTGCGGCGG |
NPC1 |
ENSG00000141458 |
-0.23046654337736308 |
[72] |
[109] |
-2 |
hSpCas9 |
negative selection |
10709809 |
23538563 |
23538586 |
18 |
+ |
28162770 |
SKM1 |
viability |
GGGTTATCCGAAAGGAACATGGG |
NPC1 |
ENSG00000141458 |
-1.7835275502073697 |
[36] |
[18] |
-8 |
hSpCas9 |
negative selection |
10709810 |
23586301 |
23586324 |
18 |
+ |
28162770 |
SKM1 |
viability |
GTAGCAGCAGGAGGAGGCCAAGG |
NPC1 |
ENSG00000141458 |
0.4999263968653569 |
[21] |
[54] |
5 |
hSpCas9 |
negative selection |
10709811 |
23560460 |
23560483 |
18 |
- |
28162770 |
SKM1 |
viability |
AGATTTTCCAGTCCATGGGATGG |
NPC1 |
ENSG00000141458 |
-0.056466951659028486 |
[79] |
[135] |
0 |
hSpCas9 |
negative selection |
10709812 |
23556277 |
23556300 |
18 |
+ |
28162770 |
SKM1 |
viability |
AAGGGTACATCAGCTCCCGAAGG |
NPC1 |
ENSG00000141458 |
0.3019870192534479 |
[38] |
[84] |
3 |
hSpCas9 |
negative selection |
10709813 |
23556250 |
23556273 |
18 |
+ |
28162770 |
SKM1 |
viability |
AGTATCTGTATGTCAAGCGGAGG |
NPC1 |
ENSG00000141458 |
-0.17158613581223325 |
[78] |
[123] |
-1 |
hSpCas9 |
negative selection |
10709814 |
23548068 |
23548091 |
18 |
+ |
28162770 |
SKM1 |
viability |
GAAGGTAATCACAAGGGCAGTGG |
NPC1 |
ENSG00000141458 |
-0.615550820554579 |
[25] |
[29] |
-5 |
hSpCas9 |
negative selection |
10709815 |
23548026 |
23548049 |
18 |
- |
28162770 |
SKM1 |
viability |
ATGATACAGAGAAGCTCCAGAGG |
NPC1 |
ENSG00000141458 |
-1.007216570488913 |
[82] |
[72] |
-6 |
hSpCas9 |
negative selection |
10709816 |
23544440 |
23544463 |
18 |
+ |
28162770 |
SKM1 |
viability |
AATGTAGCTGAAGACACCCAAGG |
NPC1 |
ENSG00000141458 |
-0.3289616867418884 |
[80] |
[113] |
-3 |
hSpCas9 |
negative selection |
10709817 |
23538607 |
23538630 |
18 |
- |
28162770 |
SKM1 |
viability |
AAGGCAAACAGAGGCCTCAGGGG |
NPC1 |
ENSG00000141458 |
-0.8709112985029519 |
[59] |
[57] |
-6 |
hSpCas9 |
negative selection |
10709818 |
23539874 |
23539897 |
18 |
- |
28162770 |
PL21 |
viability |
GGGCAGAACATGGTGTGCGGCGG |
NPC1 |
ENSG00000141458 |
0.21086602108237867 |
[267] |
[134] |
1 |
hSpCas9 |
negative selection |
10879175 |
23538563 |
23538586 |
18 |
+ |
28162770 |
PL21 |
viability |
GGGTTATCCGAAAGGAACATGGG |
NPC1 |
ENSG00000141458 |
1.9961257224677267 |
[90] |
[157] |
9 |
hSpCas9 |
negative selection |
10879176 |
23586301 |
23586324 |
18 |
+ |
28162770 |
PL21 |
viability |
GTAGCAGCAGGAGGAGGCCAAGG |
NPC1 |
ENSG00000141458 |
-2.6906313157559216 |
[88] |
[5] |
-9 |
hSpCas9 |
negative selection |
10879177 |
23560460 |
23560483 |
18 |
- |
28162770 |
PL21 |
viability |
AGATTTTCCAGTCCATGGGATGG |
NPC1 |
ENSG00000141458 |
0.8690805078498292 |
[316] |
[251] |
7 |
hSpCas9 |
negative selection |
10879178 |
23556277 |
23556300 |
18 |
+ |
28162770 |
PL21 |
viability |
AAGGGTACATCAGCTCCCGAAGG |
NPC1 |
ENSG00000141458 |
1.6624828285465205 |
[134] |
[185] |
9 |
hSpCas9 |
negative selection |
10879179 |
23556250 |
23556273 |
18 |
+ |
28162770 |
PL21 |
viability |
AGTATCTGTATGTCAAGCGGAGG |
NPC1 |
ENSG00000141458 |
0.6023758315450743 |
[282] |
[186] |
5 |
hSpCas9 |
negative selection |
10879180 |
23548068 |
23548091 |
18 |
+ |
28162770 |
PL21 |
viability |
GAAGGTAATCACAAGGGCAGTGG |
NPC1 |
ENSG00000141458 |
0.9040075204792953 |
[96] |
[78] |
7 |
hSpCas9 |
negative selection |
10879181 |
23548026 |
23548049 |
18 |
- |
28162770 |
PL21 |
viability |
ATGATACAGAGAAGCTCCAGAGG |
NPC1 |
ENSG00000141458 |
0.978624478093793 |
[273] |
[234] |
7 |
hSpCas9 |
negative selection |
10879182 |
23544440 |
23544463 |
18 |
+ |
28162770 |
PL21 |
viability |
AATGTAGCTGAAGACACCCAAGG |
NPC1 |
ENSG00000141458 |
0.0907283977687382 |
[355] |
[164] |
0 |
hSpCas9 |
negative selection |
10879183 |
23538607 |
23538630 |
18 |
- |
28162770 |
PL21 |
viability |
AAGGCAAACAGAGGCCTCAGGGG |
NPC1 |
ENSG00000141458 |
0.013141099688066205 |
[254] |
[111] |
0 |
hSpCas9 |
negative selection |
10879184 |
23539874 |
23539897 |
18 |
- |
28162770 |
P31FUJ |
viability |
GGGCAGAACATGGTGTGCGGCGG |
NPC1 |
ENSG00000141458 |
-0.28303650693451504 |
[262] |
[253] |
-3 |
hSpCas9 |
negative selection |
11048541 |
23538563 |
23538586 |
18 |
+ |
28162770 |
P31FUJ |
viability |
GGGTTATCCGAAAGGAACATGGG |
NPC1 |
ENSG00000141458 |
0.38386915603411564 |
[104] |
[160] |
4 |
hSpCas9 |
negative selection |
11048542 |
23586301 |
23586324 |
18 |
+ |
28162770 |
P31FUJ |
viability |
GTAGCAGCAGGAGGAGGCCAAGG |
NPC1 |
ENSG00000141458 |
-0.7698302280718328 |
[73] |
[50] |
-5 |
hSpCas9 |
negative selection |
11048543 |
23560460 |
23560483 |
18 |
- |
28162770 |
P31FUJ |
viability |
AGATTTTCCAGTCCATGGGATGG |
NPC1 |
ENSG00000141458 |
1.1297678749703297 |
[209] |
[539] |
9 |
hSpCas9 |
negative selection |
11048544 |
23556277 |
23556300 |
18 |
+ |
28162770 |
P31FUJ |
viability |
AAGGGTACATCAGCTCCCGAAGG |
NPC1 |
ENSG00000141458 |
0.5018532290646267 |
[124] |
[207] |
5 |
hSpCas9 |
negative selection |
11048545 |
23556250 |
23556273 |
18 |
+ |
28162770 |
P31FUJ |
viability |
AGTATCTGTATGTCAAGCGGAGG |
NPC1 |
ENSG00000141458 |
-0.39974458118283335 |
[301] |
[268] |
-4 |
hSpCas9 |
negative selection |
11048546 |
23548068 |
23548091 |
18 |
+ |
28162770 |
P31FUJ |
viability |
GAAGGTAATCACAAGGGCAGTGG |
NPC1 |
ENSG00000141458 |
0.4987089596597194 |
[105] |
[175] |
5 |
hSpCas9 |
negative selection |
11048547 |
23548026 |
23548049 |
18 |
- |
28162770 |
P31FUJ |
viability |
ATGATACAGAGAAGCTCCAGAGG |
NPC1 |
ENSG00000141458 |
-0.24366319704614547 |
[399] |
[396] |
-2 |
hSpCas9 |
negative selection |
11048548 |
23544440 |
23544463 |
18 |
+ |
28162770 |
P31FUJ |
viability |
AATGTAGCTGAAGACACCCAAGG |
NPC1 |
ENSG00000141458 |
0.25380522432820296 |
[348] |
[488] |
2 |
hSpCas9 |
negative selection |
11048549 |
23538607 |
23538630 |
18 |
- |
28162770 |
P31FUJ |
viability |
AAGGCAAACAGAGGCCTCAGGGG |
NPC1 |
ENSG00000141458 |
0.3669270070156897 |
[323] |
[490] |
4 |
hSpCas9 |
negative selection |
11048550 |
23539874 |
23539897 |
18 |
- |
28162770 |
OCIAML5 |
viability |
GGGCAGAACATGGTGTGCGGCGG |
NPC1 |
ENSG00000141458 |
0.6960591616767878 |
[118] |
[347] |
6 |
hSpCas9 |
negative selection |
11217907 |
23538563 |
23538586 |
18 |
+ |
28162770 |
OCIAML5 |
viability |
GGGTTATCCGAAAGGAACATGGG |
NPC1 |
ENSG00000141458 |
0.9173205009945866 |
[65] |
[224] |
7 |
hSpCas9 |
negative selection |
11217908 |
23586301 |
23586324 |
18 |
+ |
28162770 |
OCIAML5 |
viability |
GTAGCAGCAGGAGGAGGCCAAGG |
NPC1 |
ENSG00000141458 |
-4.125085065270413 |
[28] |
[2] |
-9 |
hSpCas9 |
negative selection |
11217909 |
23560460 |
23560483 |
18 |
- |
28162770 |
OCIAML5 |
viability |
AGATTTTCCAGTCCATGGGATGG |
NPC1 |
ENSG00000141458 |
0.06363519482934299 |
[184] |
[348] |
0 |
hSpCas9 |
negative selection |
11217910 |
23556277 |
23556300 |
18 |
+ |
28162770 |
OCIAML5 |
viability |
AAGGGTACATCAGCTCCCGAAGG |
NPC1 |
ENSG00000141458 |
1.44398289219776 |
[44] |
[220] |
9 |
hSpCas9 |
negative selection |
11217911 |
23556250 |
23556273 |
18 |
+ |
28162770 |
OCIAML5 |
viability |
AGTATCTGTATGTCAAGCGGAGG |
NPC1 |
ENSG00000141458 |
-0.04702923169979223 |
[177] |
[310] |
0 |
hSpCas9 |
negative selection |
11217912 |
23548068 |
23548091 |
18 |
+ |
28162770 |
OCIAML5 |
viability |
GAAGGTAATCACAAGGGCAGTGG |
NPC1 |
ENSG00000141458 |
-0.44996812729265134 |
[83] |
[110] |
-3 |
hSpCas9 |
negative selection |
11217913 |
23548026 |
23548049 |
18 |
- |
28162770 |
OCIAML5 |
viability |
ATGATACAGAGAAGCTCCAGAGG |
NPC1 |
ENSG00000141458 |
0.5534481542963403 |
[170] |
[452] |
5 |
hSpCas9 |
negative selection |
11217914 |
23544440 |
23544463 |
18 |
+ |
28162770 |
OCIAML5 |
viability |
AATGTAGCTGAAGACACCCAAGG |
NPC1 |
ENSG00000141458 |
0.5072614958285591 |
[197] |
[507] |
4 |
hSpCas9 |
negative selection |
11217915 |
23538607 |
23538630 |
18 |
- |
28162770 |
OCIAML5 |
viability |
AAGGCAAACAGAGGCCTCAGGGG |
NPC1 |
ENSG00000141458 |
1.2290701918614086 |
[120] |
[511] |
9 |
hSpCas9 |
negative selection |
11217916 |
23539874 |
23539897 |
18 |
- |
28162770 |
EOL1 |
viability |
GGGCAGAACATGGTGTGCGGCGG |
NPC1 |
ENSG00000141458 |
1.7090325443078798 |
[435] |
[750] |
9 |
hSpCas9 |
negative selection |
11387273 |
23538563 |
23538586 |
18 |
+ |
28162770 |
EOL1 |
viability |
GGGTTATCCGAAAGGAACATGGG |
NPC1 |
ENSG00000141458 |
1.448706993229491 |
[104] |
[150] |
9 |
hSpCas9 |
negative selection |
11387274 |
23586301 |
23586324 |
18 |
+ |
28162770 |
EOL1 |
viability |
GTAGCAGCAGGAGGAGGCCAAGG |
NPC1 |
ENSG00000141458 |
0.025993035130080444 |
[150] |
[80] |
0 |
hSpCas9 |
negative selection |
11387275 |
23560460 |
23560483 |
18 |
- |
28162770 |
EOL1 |
viability |
AGATTTTCCAGTCCATGGGATGG |
NPC1 |
ENSG00000141458 |
0.4299134457941073 |
[502] |
[356] |
4 |
hSpCas9 |
negative selection |
11387276 |
23556277 |
23556300 |
18 |
+ |
28162770 |
EOL1 |
viability |
AAGGGTACATCAGCTCCCGAAGG |
NPC1 |
ENSG00000141458 |
0.11852313549090063 |
[270] |
[154] |
1 |
hSpCas9 |
negative selection |
11387277 |
23556250 |
23556273 |
18 |
+ |
28162770 |
EOL1 |
viability |
AGTATCTGTATGTCAAGCGGAGG |
NPC1 |
ENSG00000141458 |
0.0771699146028082 |
[465] |
[258] |
0 |
hSpCas9 |
negative selection |
11387278 |
23548068 |
23548091 |
18 |
+ |
28162770 |
EOL1 |
viability |
GAAGGTAATCACAAGGGCAGTGG |
NPC1 |
ENSG00000141458 |
-0.8875922130524464 |
[150] |
[42] |
-6 |
hSpCas9 |
negative selection |
11387279 |
23548026 |
23548049 |
18 |
- |
28162770 |
EOL1 |
viability |
ATGATACAGAGAAGCTCCAGAGG |
NPC1 |
ENSG00000141458 |
0.35349087287459663 |
[412] |
[277] |
3 |
hSpCas9 |
negative selection |
11387280 |
23544440 |
23544463 |
18 |
+ |
28162770 |
EOL1 |
viability |
AATGTAGCTGAAGACACCCAAGG |
NPC1 |
ENSG00000141458 |
0.1824843097646494 |
[377] |
[225] |
1 |
hSpCas9 |
negative selection |
11387281 |
23538607 |
23538630 |
18 |
- |
28162770 |
EOL1 |
viability |
AAGGCAAACAGAGGCCTCAGGGG |
NPC1 |
ENSG00000141458 |
0.7421710290819657 |
[319] |
[281] |
6 |
hSpCas9 |
negative selection |
11387282 |
23539874 |
23539897 |
18 |
- |
28162770 |
MOLM13 |
viability |
GGGCAGAACATGGTGTGCGGCGG |
NPC1 |
ENSG00000141458 |
0.7475066715739767 |
[345] |
[419] |
5 |
hSpCas9 |
negative selection |
11556639 |
23538563 |
23538586 |
18 |
+ |
28162770 |
MOLM13 |
viability |
GGGTTATCCGAAAGGAACATGGG |
NPC1 |
ENSG00000141458 |
0.4678893815445787 |
[141] |
[141] |
3 |
hSpCas9 |
negative selection |
11556640 |
23586301 |
23586324 |
18 |
+ |
28162770 |
MOLM13 |
viability |
GTAGCAGCAGGAGGAGGCCAAGG |
NPC1 |
ENSG00000141458 |
-5.300294943232348 |
[108] |
[1] |
-9 |
hSpCas9 |
negative selection |
11556641 |
23560460 |
23560483 |
18 |
- |
28162770 |
MOLM13 |
viability |
AGATTTTCCAGTCCATGGGATGG |
NPC1 |
ENSG00000141458 |
0.06674227004917505 |
[378] |
[286] |
0 |
hSpCas9 |
negative selection |
11556642 |
23556277 |
23556300 |
18 |
+ |
28162770 |
MOLM13 |
viability |
AAGGGTACATCAGCTCCCGAAGG |
NPC1 |
ENSG00000141458 |
0.596337747010732 |
[246] |
[269] |
4 |
hSpCas9 |
negative selection |
11556643 |
23556250 |
23556273 |
18 |
+ |
28162770 |
MOLM13 |
viability |
AGTATCTGTATGTCAAGCGGAGG |
NPC1 |
ENSG00000141458 |
0.9354290205308298 |
[370] |
[512] |
7 |
hSpCas9 |
negative selection |
11556644 |
23548068 |
23548091 |
18 |
+ |
28162770 |
MOLM13 |
viability |
GAAGGTAATCACAAGGGCAGTGG |
NPC1 |
ENSG00000141458 |
1.4917361234989466 |
[149] |
[304] |
9 |
hSpCas9 |
negative selection |
11556645 |
23548026 |
23548049 |
18 |
- |
28162770 |
MOLM13 |
viability |
ATGATACAGAGAAGCTCCAGAGG |
NPC1 |
ENSG00000141458 |
0.6864243272115129 |
[427] |
[497] |
5 |
hSpCas9 |
negative selection |
11556646 |
23544440 |
23544463 |
18 |
+ |
28162770 |
MOLM13 |
viability |
AATGTAGCTGAAGACACCCAAGG |
NPC1 |
ENSG00000141458 |
0.15098185612177406 |
[501] |
[402] |
1 |
hSpCas9 |
negative selection |
11556647 |
23538607 |
23538630 |
18 |
- |
28162770 |
MOLM13 |
viability |
AAGGCAAACAGAGGCCTCAGGGG |
NPC1 |
ENSG00000141458 |
0.9425698272508245 |
[307] |
[427] |
7 |
hSpCas9 |
negative selection |
11556648 |
23539874 |
23539897 |
18 |
- |
28162770 |
HEL |
viability |
GGGCAGAACATGGTGTGCGGCGG |
NPC1 |
ENSG00000141458 |
0.2873725453944882 |
[370] |
[289] |
2 |
hSpCas9 |
negative selection |
11726005 |
23538563 |
23538586 |
18 |
+ |
28162770 |
HEL |
viability |
GGGTTATCCGAAAGGAACATGGG |
NPC1 |
ENSG00000141458 |
0.6841587593803377 |
[102] |
[105] |
6 |
hSpCas9 |
negative selection |
11726006 |
23586301 |
23586324 |
18 |
+ |
28162770 |
HEL |
viability |
GTAGCAGCAGGAGGAGGCCAAGG |
NPC1 |
ENSG00000141458 |
1.2424983346495937 |
[96] |
[146] |
9 |
hSpCas9 |
negative selection |
11726007 |
23560460 |
23560483 |
18 |
- |
28162770 |
HEL |
viability |
AGATTTTCCAGTCCATGGGATGG |
NPC1 |
ENSG00000141458 |
0.9888160762552908 |
[390] |
[496] |
8 |
hSpCas9 |
negative selection |
11726008 |
23556277 |
23556300 |
18 |
+ |
28162770 |
HEL |
viability |
AAGGGTACATCAGCTCCCGAAGG |
NPC1 |
ENSG00000141458 |
1.7530622469063553 |
[150] |
[325] |
9 |
hSpCas9 |
negative selection |
11726009 |
23556250 |
23556273 |
18 |
+ |
28162770 |
HEL |
viability |
AGTATCTGTATGTCAAGCGGAGG |
NPC1 |
ENSG00000141458 |
0.1411513007650793 |
[394] |
[278] |
1 |
hSpCas9 |
negative selection |
11726010 |
23548068 |
23548091 |
18 |
+ |
28162770 |
HEL |
viability |
GAAGGTAATCACAAGGGCAGTGG |
NPC1 |
ENSG00000141458 |
-0.3572611679996429 |
[93] |
[46] |
-2 |
hSpCas9 |
negative selection |
11726011 |
23548026 |
23548049 |
18 |
- |
28162770 |
HEL |
viability |
ATGATACAGAGAAGCTCCAGAGG |
NPC1 |
ENSG00000141458 |
0.5829294367650532 |
[393] |
[377] |
5 |
hSpCas9 |
negative selection |
11726012 |
23544440 |
23544463 |
18 |
+ |
28162770 |
HEL |
viability |
AATGTAGCTGAAGACACCCAAGG |
NPC1 |
ENSG00000141458 |
0.4495064570659758 |
[350] |
[306] |
4 |
hSpCas9 |
negative selection |
11726013 |
23538607 |
23538630 |
18 |
- |
28162770 |
HEL |
viability |
AAGGCAAACAGAGGCCTCAGGGG |
NPC1 |
ENSG00000141458 |
-0.35726116799964314 |
[253] |
[126] |
-3 |
hSpCas9 |
negative selection |
11726014 |
23539874 |
23539897 |
18 |
- |
28162770 |
MV411 |
viability |
GGGCAGAACATGGTGTGCGGCGG |
NPC1 |
ENSG00000141458 |
1.235106748872056 |
[234] |
[465] |
9 |
hSpCas9 |
negative selection |
11895371 |
23538563 |
23538586 |
18 |
+ |
28162770 |
MV411 |
viability |
GGGTTATCCGAAAGGAACATGGG |
NPC1 |
ENSG00000141458 |
1.3289674362793735 |
[85] |
[181] |
9 |
hSpCas9 |
negative selection |
11895372 |
23586301 |
23586324 |
18 |
+ |
28162770 |
MV411 |
viability |
GTAGCAGCAGGAGGAGGCCAAGG |
NPC1 |
ENSG00000141458 |
-1.5688504960448368 |
[80] |
[22] |
-7 |
hSpCas9 |
negative selection |
11895373 |
23560460 |
23560483 |
18 |
- |
28162770 |
MV411 |
viability |
AGATTTTCCAGTCCATGGGATGG |
NPC1 |
ENSG00000141458 |
1.0747981646434268 |
[265] |
[471] |
8 |
hSpCas9 |
negative selection |
11895374 |
23556277 |
23556300 |
18 |
+ |
28162770 |
MV411 |
viability |
AAGGGTACATCAGCTCCCGAAGG |
NPC1 |
ENSG00000141458 |
0.9043339457455757 |
[162] |
[256] |
7 |
hSpCas9 |
negative selection |
11895375 |
23556250 |
23556273 |
18 |
+ |
28162770 |
MV411 |
viability |
AGTATCTGTATGTCAAGCGGAGG |
NPC1 |
ENSG00000141458 |
0.5262969237782518 |
[271] |
[329] |
5 |
hSpCas9 |
negative selection |
11895376 |
23548068 |
23548091 |
18 |
+ |
28162770 |
MV411 |
viability |
GAAGGTAATCACAAGGGCAGTGG |
NPC1 |
ENSG00000141458 |
0.6501967202831823 |
[117] |
[155] |
6 |
hSpCas9 |
negative selection |
11895377 |
23548026 |
23548049 |
18 |
- |
28162770 |
MV411 |
viability |
ATGATACAGAGAAGCTCCAGAGG |
NPC1 |
ENSG00000141458 |
1.4039868302232568 |
[300] |
[670] |
9 |
hSpCas9 |
negative selection |
11895378 |
23544440 |
23544463 |
18 |
+ |
28162770 |
MV411 |
viability |
AATGTAGCTGAAGACACCCAAGG |
NPC1 |
ENSG00000141458 |
0.8806552201111527 |
[293] |
[455] |
7 |
hSpCas9 |
negative selection |
11895379 |
23538607 |
23538630 |
18 |
- |
28162770 |
MV411 |
viability |
AAGGCAAACAGAGGCCTCAGGGG |
NPC1 |
ENSG00000141458 |
-0.17260062955443495 |
[288] |
[215] |
-1 |
hSpCas9 |
negative selection |
11895380 |
23539874 |
23539897 |
18 |
- |
28162770 |
MONOMAC1 |
viability |
GGGCAGAACATGGTGTGCGGCGG |
NPC1 |
ENSG00000141458 |
-0.4788078154749335 |
[185] |
[152] |
-4 |
hSpCas9 |
negative selection |
12064737 |
23538563 |
23538586 |
18 |
+ |
28162770 |
MONOMAC1 |
viability |
GGGTTATCCGAAAGGAACATGGG |
NPC1 |
ENSG00000141458 |
0.17883005493861232 |
[83] |
[108] |
1 |
hSpCas9 |
negative selection |
12064738 |
23586301 |
23586324 |
18 |
+ |
28162770 |
MONOMAC1 |
viability |
GTAGCAGCAGGAGGAGGCCAAGG |
NPC1 |
ENSG00000141458 |
-0.27103742850333057 |
[59] |
[56] |
-2 |
hSpCas9 |
negative selection |
12064739 |
23560460 |
23560483 |
18 |
- |
28162770 |
MONOMAC1 |
viability |
AGATTTTCCAGTCCATGGGATGG |
NPC1 |
ENSG00000141458 |
0.7654884475217832 |
[194] |
[379] |
7 |
hSpCas9 |
negative selection |
12064740 |
23556277 |
23556300 |
18 |
+ |
28162770 |
MONOMAC1 |
viability |
AAGGGTACATCAGCTCCCGAAGG |
NPC1 |
ENSG00000141458 |
0.6142015094852784 |
[105] |
[185] |
6 |
hSpCas9 |
negative selection |
12064741 |
23556250 |
23556273 |
18 |
+ |
28162770 |
MONOMAC1 |
viability |
AGTATCTGTATGTCAAGCGGAGG |
NPC1 |
ENSG00000141458 |
0.7186649186337862 |
[184] |
[348] |
7 |
hSpCas9 |
negative selection |
12064742 |
23548068 |
23548091 |
18 |
+ |
28162770 |
MONOMAC1 |
viability |
GAAGGTAATCACAAGGGCAGTGG |
NPC1 |
ENSG00000141458 |
-0.5380737648946207 |
[75] |
[59] |
-4 |
hSpCas9 |
negative selection |
12064743 |
23548026 |
23548049 |
18 |
- |
28162770 |
MONOMAC1 |
viability |
ATGATACAGAGAAGCTCCAGAGG |
NPC1 |
ENSG00000141458 |
0.11671731638210847 |
[176] |
[219] |
1 |
hSpCas9 |
negative selection |
12064744 |
23544440 |
23544463 |
18 |
+ |
28162770 |
MONOMAC1 |
viability |
AATGTAGCTGAAGACACCCAAGG |
NPC1 |
ENSG00000141458 |
0.9066544559826717 |
[207] |
[446] |
8 |
hSpCas9 |
negative selection |
12064745 |
23538607 |
23538630 |
18 |
- |
28162770 |
MONOMAC1 |
viability |
AAGGCAAACAGAGGCCTCAGGGG |
NPC1 |
ENSG00000141458 |
1.0070547575339506 |
[101] |
[234] |
8 |
hSpCas9 |
negative selection |
12064746 |
23539874 |
23539897 |
18 |
- |
28162770 |
OCIAML2 |
viability |
GGGCAGAACATGGTGTGCGGCGG |
NPC1 |
ENSG00000141458 |
0.10897944098478807 |
[44] |
[268] |
1 |
hSpCas9 |
negative selection |
12234103 |
23538563 |
23538586 |
18 |
+ |
28162770 |
OCIAML2 |
viability |
GGGTTATCCGAAAGGAACATGGG |
NPC1 |
ENSG00000141458 |
-0.8076648125197317 |
[17] |
[56] |
-5 |
hSpCas9 |
negative selection |
12234104 |
23586301 |
23586324 |
18 |
+ |
28162770 |
OCIAML2 |
viability |
GTAGCAGCAGGAGGAGGCCAAGG |
NPC1 |
ENSG00000141458 |
-1.1976113308357452 |
[11] |
[28] |
-7 |
hSpCas9 |
negative selection |
12234105 |
23560460 |
23560483 |
18 |
- |
28162770 |
OCIAML2 |
viability |
AGATTTTCCAGTCCATGGGATGG |
NPC1 |
ENSG00000141458 |
0.19627428901517097 |
[76] |
[488] |
1 |
hSpCas9 |
negative selection |
12234106 |
23556277 |
23556300 |
18 |
+ |
28162770 |
OCIAML2 |
viability |
AAGGGTACATCAGCTCCCGAAGG |
NPC1 |
ENSG00000141458 |
0.034898207984589924 |
[27] |
[158] |
0 |
hSpCas9 |
negative selection |
12234107 |
23556250 |
23556273 |
18 |
+ |
28162770 |
OCIAML2 |
viability |
AGTATCTGTATGTCAAGCGGAGG |
NPC1 |
ENSG00000141458 |
0.20659118333098359 |
[52] |
[338] |
2 |
hSpCas9 |
negative selection |
12234108 |
23548068 |
23548091 |
18 |
+ |
28162770 |
OCIAML2 |
viability |
GAAGGTAATCACAAGGGCAGTGG |
NPC1 |
ENSG00000141458 |
0.28425767692130754 |
[15] |
[107] |
2 |
hSpCas9 |
negative selection |
12234109 |
23548026 |
23548049 |
18 |
- |
28162770 |
OCIAML2 |
viability |
ATGATACAGAGAAGCTCCAGAGG |
NPC1 |
ENSG00000141458 |
0.22004211665010998 |
[56] |
[367] |
2 |
hSpCas9 |
negative selection |
12234110 |
23544440 |
23544463 |
18 |
+ |
28162770 |
OCIAML2 |
viability |
AATGTAGCTGAAGACACCCAAGG |
NPC1 |
ENSG00000141458 |
0.5596729349213647 |
[52] |
[432] |
5 |
hSpCas9 |
negative selection |
12234111 |
23538607 |
23538630 |
18 |
- |
28162770 |
OCIAML2 |
viability |
AAGGCAAACAGAGGCCTCAGGGG |
NPC1 |
ENSG00000141458 |
0.19612676664264234 |
[39] |
[253] |
1 |
hSpCas9 |
negative selection |
12234112 |
23539874 |
23539897 |
18 |
- |
28162770 |
OCIAML3 |
viability |
GGGCAGAACATGGTGTGCGGCGG |
NPC1 |
ENSG00000141458 |
1.0673579320560744 |
[94] |
[600] |
8 |
hSpCas9 |
negative selection |
12403469 |
23538563 |
23538586 |
18 |
+ |
28162770 |
OCIAML3 |
viability |
GGGTTATCCGAAAGGAACATGGG |
NPC1 |
ENSG00000141458 |
1.4701226970955523 |
[21] |
[183] |
9 |
hSpCas9 |
negative selection |
12403470 |
23586301 |
23586324 |
18 |
+ |
28162770 |
OCIAML3 |
viability |
GTAGCAGCAGGAGGAGGCCAAGG |
NPC1 |
ENSG00000141458 |
0.06895737239826594 |
[23] |
[75] |
0 |
hSpCas9 |
negative selection |
12403471 |
23560460 |
23560483 |
18 |
- |
28162770 |
OCIAML3 |
viability |
AGATTTTCCAGTCCATGGGATGG |
NPC1 |
ENSG00000141458 |
0.9934573676001631 |
[95] |
[576] |
8 |
hSpCas9 |
negative selection |
12403472 |
23556277 |
23556300 |
18 |
+ |
28162770 |
OCIAML3 |
viability |
AAGGGTACATCAGCTCCCGAAGG |
NPC1 |
ENSG00000141458 |
-0.8419351537677484 |
[37] |
[63] |
-6 |
hSpCas9 |
negative selection |
12403473 |
23556250 |
23556273 |
18 |
+ |
28162770 |
OCIAML3 |
viability |
AGTATCTGTATGTCAAGCGGAGG |
NPC1 |
ENSG00000141458 |
-0.43050890804128356 |
[74] |
[167] |
-3 |
hSpCas9 |
negative selection |
12403474 |
23548068 |
23548091 |
18 |
+ |
28162770 |
OCIAML3 |
viability |
GAAGGTAATCACAAGGGCAGTGG |
NPC1 |
ENSG00000141458 |
-0.1554346265845301 |
[37] |
[102] |
-1 |
hSpCas9 |
negative selection |
12403475 |
23548026 |
23548049 |
18 |
- |
28162770 |
OCIAML3 |
viability |
ATGATACAGAGAAGCTCCAGAGG |
NPC1 |
ENSG00000141458 |
0.08406426478847451 |
[89] |
[287] |
0 |
hSpCas9 |
negative selection |
12403476 |
23544440 |
23544463 |
18 |
+ |
28162770 |
OCIAML3 |
viability |
AATGTAGCTGAAGACACCCAAGG |
NPC1 |
ENSG00000141458 |
0.6861002788685722 |
[76] |
[373] |
6 |
hSpCas9 |
negative selection |
12403477 |
23538607 |
23538630 |
18 |
- |
28162770 |
OCIAML3 |
viability |
AAGGCAAACAGAGGCCTCAGGGG |
NPC1 |
ENSG00000141458 |
-0.19065194609295477 |
[61] |
[163] |
-1 |
hSpCas9 |
negative selection |
12403478 |