| 19950908 |
19950931 |
3 |
+ |
26472758 |
Jiyoye |
viability |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
0.8594553990232073 |
[238] |
[326] |
6 |
hSpCas9 |
negative selection |
132645 |
19950955 |
19950978 |
3 |
- |
26472758 |
Jiyoye |
viability |
CCAGAAGTACTAGTTTGAACTGG |
RAB5A |
ENSG00000144566 |
-0.61554469499421 |
[127] |
[62] |
-4 |
hSpCas9 |
negative selection |
132646 |
19950890 |
19950913 |
3 |
+ |
26472758 |
Jiyoye |
viability |
AATTTGGACATGGCTAGTCGAGG |
RAB5A |
ENSG00000144566 |
1.161156952687681 |
[117] |
[198] |
7 |
hSpCas9 |
negative selection |
132647 |
19950984 |
19951007 |
3 |
- |
26472758 |
Jiyoye |
viability |
TAGGCTTGATTTGCCAACAGCGG |
RAB5A |
ENSG00000144566 |
-0.04685624938883415 |
[199] |
[145] |
0 |
hSpCas9 |
negative selection |
132648 |
19950924 |
19950947 |
3 |
- |
26472758 |
Jiyoye |
viability |
ATTTCCCGTATTTGGCCCGTTGG |
RAB5A |
ENSG00000144566 |
0.25751053013002423 |
[547] |
[493] |
2 |
hSpCas9 |
negative selection |
132649 |
19950908 |
19950931 |
3 |
+ |
26472758 |
KBM7 |
viability |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
0.8289575148471928 |
[1078,926] |
[932,747] |
8 |
hSpCas9 |
negative selection |
323763 |
19950955 |
19950978 |
3 |
- |
26472758 |
KBM7 |
viability |
CCAGAAGTACTAGTTTGAACTGG |
RAB5A |
ENSG00000144566 |
0.1147185786709729 |
[420,301] |
[250,119] |
1 |
hSpCas9 |
negative selection |
323764 |
19950890 |
19950913 |
3 |
+ |
26472758 |
KBM7 |
viability |
AATTTGGACATGGCTAGTCGAGG |
RAB5A |
ENSG00000144566 |
0.7940146970478607 |
[960,609] |
[706,558] |
8 |
hSpCas9 |
negative selection |
323765 |
19950984 |
19951007 |
3 |
- |
26472758 |
KBM7 |
viability |
TAGGCTTGATTTGCCAACAGCGG |
RAB5A |
ENSG00000144566 |
0.024594945683638417 |
[632,406] |
[340,157] |
0 |
hSpCas9 |
negative selection |
323766 |
19950924 |
19950947 |
3 |
- |
26472758 |
KBM7 |
viability |
ATTTCCCGTATTTGGCCCGTTGG |
RAB5A |
ENSG00000144566 |
0.7442761413116177 |
[2085,1390] |
[1565,1152] |
7 |
hSpCas9 |
negative selection |
323767 |
19950908 |
19950931 |
3 |
+ |
26472758 |
Raji |
viability |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
0.861144372082784 |
[426] |
[179] |
7 |
hSpCas9 |
negative selection |
514881 |
19950955 |
19950978 |
3 |
- |
26472758 |
Raji |
viability |
CCAGAAGTACTAGTTTGAACTGG |
RAB5A |
ENSG00000144566 |
0.3977252872031285 |
[156] |
[47] |
4 |
hSpCas9 |
negative selection |
514882 |
19950890 |
19950913 |
3 |
+ |
26472758 |
Raji |
viability |
AATTTGGACATGGCTAGTCGAGG |
RAB5A |
ENSG00000144566 |
0.19236505888168065 |
[444] |
[117] |
1 |
hSpCas9 |
negative selection |
514883 |
19950984 |
19951007 |
3 |
- |
26472758 |
Raji |
viability |
TAGGCTTGATTTGCCAACAGCGG |
RAB5A |
ENSG00000144566 |
-0.05999478395836641 |
[282] |
[62] |
0 |
hSpCas9 |
negative selection |
514884 |
19950924 |
19950947 |
3 |
- |
26472758 |
Raji |
viability |
ATTTCCCGTATTTGGCCCGTTGG |
RAB5A |
ENSG00000144566 |
0.7664663879956921 |
[802] |
[316] |
7 |
hSpCas9 |
negative selection |
514885 |
19950908 |
19950931 |
3 |
+ |
26472758 |
K562 |
viability |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
1.1452433225756113 |
[714] |
[1334] |
8 |
hSpCas9 |
negative selection |
705999 |
19950955 |
19950978 |
3 |
- |
26472758 |
K562 |
viability |
CCAGAAGTACTAGTTTGAACTGG |
RAB5A |
ENSG00000144566 |
0.7232207694743832 |
[342] |
[477] |
6 |
hSpCas9 |
negative selection |
706000 |
19950890 |
19950913 |
3 |
+ |
26472758 |
K562 |
viability |
AATTTGGACATGGCTAGTCGAGG |
RAB5A |
ENSG00000144566 |
0.8664186077121327 |
[704] |
[1084] |
7 |
hSpCas9 |
negative selection |
706001 |
19950984 |
19951007 |
3 |
- |
26472758 |
K562 |
viability |
TAGGCTTGATTTGCCAACAGCGG |
RAB5A |
ENSG00000144566 |
0.36499239098814845 |
[412] |
[448] |
3 |
hSpCas9 |
negative selection |
706002 |
19950924 |
19950947 |
3 |
- |
26472758 |
K562 |
viability |
ATTTCCCGTATTTGGCCCGTTGG |
RAB5A |
ENSG00000144566 |
1.288989832247583 |
[987] |
[2037] |
9 |
hSpCas9 |
negative selection |
706003 |
19950908 |
19950931 |
3 |
+ |
26627737 |
DLD1 |
viability |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
0.7607356190410557 |
[377] |
[212,209,180] |
7 |
hSpCas9 |
negative selection |
821193 |
19950909 |
19950932 |
3 |
+ |
26627737 |
DLD1 |
viability |
GAGGCGCAACAAGACCCAACGGG |
RAB5A |
ENSG00000144566 |
0.5249300958363725 |
[290] |
[100,126,159] |
5 |
hSpCas9 |
negative selection |
821194 |
19950908 |
19950931 |
3 |
+ |
26627737 |
GBM cells |
viability after 5 days |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
0.4576997530477685 |
[240] |
[196,157] |
7 |
hSpCas9 |
negative selection |
903508 |
19950909 |
19950932 |
3 |
+ |
26627737 |
GBM cells |
viability after 5 days |
GAGGCGCAACAAGACCCAACGGG |
RAB5A |
ENSG00000144566 |
-0.3859672332463573 |
[172] |
[49,91] |
-6 |
hSpCas9 |
negative selection |
903509 |
19950908 |
19950931 |
3 |
+ |
26627737 |
GBM cells |
viability after 13 days |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
0.5184888391296554 |
[240] |
[183,189] |
6 |
hSpCas9 |
negative selection |
985823 |
19950909 |
19950932 |
3 |
+ |
26627737 |
GBM cells |
viability after 13 days |
GAGGCGCAACAAGACCCAACGGG |
RAB5A |
ENSG00000144566 |
-0.2435169513982307 |
[172] |
[102,59] |
-3 |
hSpCas9 |
negative selection |
985824 |
19950908 |
19950931 |
3 |
+ |
26627737 |
GBM cells |
viability after 21 days |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
0.2135831266765125 |
[240] |
[155,147] |
2 |
hSpCas9 |
negative selection |
1068138 |
19950909 |
19950932 |
3 |
+ |
26627737 |
GBM cells |
viability after 21 days |
GAGGCGCAACAAGACCCAACGGG |
RAB5A |
ENSG00000144566 |
-0.5536437199640577 |
[172] |
[74,53] |
-5 |
hSpCas9 |
negative selection |
1068139 |
19950908 |
19950931 |
3 |
+ |
26627737 |
RPE1 |
viability after 9 days |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
-0.3130289435300016 |
[1216] |
[307,304] |
-2 |
hSpCas9 |
negative selection |
1150453 |
19950909 |
19950932 |
3 |
+ |
26627737 |
RPE1 |
viability after 9 days |
GAGGCGCAACAAGACCCAACGGG |
RAB5A |
ENSG00000144566 |
-0.7173241013425801 |
[638] |
[84,168] |
-5 |
hSpCas9 |
negative selection |
1150454 |
19950908 |
19950931 |
3 |
+ |
26627737 |
RPE1 |
viability after 12 days |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
-0.1759385042970567 |
[1216] |
[269,309] |
-1 |
hSpCas9 |
negative selection |
1232768 |
19950909 |
19950932 |
3 |
+ |
26627737 |
RPE1 |
viability after 12 days |
GAGGCGCAACAAGACCCAACGGG |
RAB5A |
ENSG00000144566 |
-0.44203419932016963 |
[638] |
[121,130] |
-3 |
hSpCas9 |
negative selection |
1232769 |
19950908 |
19950931 |
3 |
+ |
26627737 |
RPE1 |
viability after 15 days |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
0.15758942181279856 |
[1216] |
[355,410] |
1 |
hSpCas9 |
negative selection |
1315083 |
19950909 |
19950932 |
3 |
+ |
26627737 |
RPE1 |
viability after 15 days |
GAGGCGCAACAAGACCCAACGGG |
RAB5A |
ENSG00000144566 |
-0.46041977257210964 |
[638] |
[222,42] |
-3 |
hSpCas9 |
negative selection |
1315084 |
19950908 |
19950931 |
3 |
+ |
26627737 |
RPE1 |
viability after 18 days |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
-0.5946836334768488 |
[1216] |
[216,217] |
-4 |
hSpCas9 |
negative selection |
1397398 |
19950909 |
19950932 |
3 |
+ |
26627737 |
RPE1 |
viability after 18 days |
GAGGCGCAACAAGACCCAACGGG |
RAB5A |
ENSG00000144566 |
-0.9183074061234971 |
[638] |
[112,67] |
-5 |
hSpCas9 |
negative selection |
1397399 |
19950908 |
19950931 |
3 |
+ |
26627737 |
HeLa |
viability after 8 days |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
-0.2504778590112877 |
[536] |
[279,150,177] |
-2 |
hSpCas9 |
negative selection |
1479713 |
19950909 |
19950932 |
3 |
+ |
26627737 |
HeLa |
viability after 8 days |
GAGGCGCAACAAGACCCAACGGG |
RAB5A |
ENSG00000144566 |
0.11882759043858104 |
[273] |
[37,196,132] |
1 |
hSpCas9 |
negative selection |
1479714 |
19950908 |
19950931 |
3 |
+ |
26627737 |
HeLa |
viability after 12 days |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
-0.5161819826685727 |
[536] |
[173,202,83] |
-4 |
hSpCas9 |
negative selection |
1562028 |
19950909 |
19950932 |
3 |
+ |
26627737 |
HeLa |
viability after 12 days |
GAGGCGCAACAAGACCCAACGGG |
RAB5A |
ENSG00000144566 |
0.38463452246971824 |
[273] |
[266,137,42] |
3 |
hSpCas9 |
negative selection |
1562029 |
19950908 |
19950931 |
3 |
+ |
26627737 |
HeLa |
viability after 15 days |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
0.3546946081102218 |
[536] |
[285,327,219] |
3 |
hSpCas9 |
negative selection |
1644343 |
19950909 |
19950932 |
3 |
+ |
26627737 |
HeLa |
viability after 15 days |
GAGGCGCAACAAGACCCAACGGG |
RAB5A |
ENSG00000144566 |
0.598736555959759 |
[273] |
[175,169,159] |
5 |
hSpCas9 |
negative selection |
1644344 |
19950908 |
19950931 |
3 |
+ |
26627737 |
HeLa |
viability after 18 days |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
0.38054079592313494 |
[536] |
[206,264,219] |
3 |
hSpCas9 |
negative selection |
1726658 |
19950909 |
19950932 |
3 |
+ |
26627737 |
HeLa |
viability after 18 days |
GAGGCGCAACAAGACCCAACGGG |
RAB5A |
ENSG00000144566 |
0.6200841269955139 |
[273] |
[121,141,159] |
5 |
hSpCas9 |
negative selection |
1726659 |
19950908 |
19950931 |
3 |
+ |
26627737 |
HCT116 |
viability after 6 days |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
0.5244342113613427 |
[509] |
[182,77] |
3 |
hSpCas9 |
negative selection |
1808973 |
19950909 |
19950932 |
3 |
+ |
26627737 |
HCT116 |
viability after 6 days |
GAGGCGCAACAAGACCCAACGGG |
RAB5A |
ENSG00000144566 |
0.21882886059726547 |
[322] |
[158,3] |
1 |
hSpCas9 |
negative selection |
1808974 |
19950908 |
19950931 |
3 |
+ |
26627737 |
HCT116 |
viability after 8 days |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
1.1606170772065605 |
[189] |
[287,171,242] |
8 |
hSpCas9 |
negative selection |
1891288 |
19950909 |
19950932 |
3 |
+ |
26627737 |
HCT116 |
viability after 8 days |
GAGGCGCAACAAGACCCAACGGG |
RAB5A |
ENSG00000144566 |
0.28442590359508113 |
[161] |
[121,62,140] |
3 |
hSpCas9 |
negative selection |
1891289 |
19950908 |
19950931 |
3 |
+ |
26627737 |
HCT116 |
viability after 9 days |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
0.4748030338003971 |
[509] |
[286,111] |
3 |
hSpCas9 |
negative selection |
1973603 |
19950909 |
19950932 |
3 |
+ |
26627737 |
HCT116 |
viability after 9 days |
GAGGCGCAACAAGACCCAACGGG |
RAB5A |
ENSG00000144566 |
0.6716106064790386 |
[322] |
[190,94] |
5 |
hSpCas9 |
negative selection |
1973604 |
19950908 |
19950931 |
3 |
+ |
26627737 |
HCT116 |
viability after 12 days |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
1.202178350996504 |
[189] |
[240,219,226] |
8 |
hSpCas9 |
negative selection |
2055918 |
19950909 |
19950932 |
3 |
+ |
26627737 |
HCT116 |
viability after 12 days |
GAGGCGCAACAAGACCCAACGGG |
RAB5A |
ENSG00000144566 |
-0.9517344667947462 |
[161] |
[43,41,45] |
-8 |
hSpCas9 |
negative selection |
2055919 |
19950908 |
19950931 |
3 |
+ |
26627737 |
HCT116 |
viability after 15 days |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
1.2375227660637629 |
[189] |
[318,254,205] |
8 |
hSpCas9 |
negative selection |
2138233 |
19950909 |
19950932 |
3 |
+ |
26627737 |
HCT116 |
viability after 15 days |
GAGGCGCAACAAGACCCAACGGG |
RAB5A |
ENSG00000144566 |
-0.21293829991781343 |
[161] |
[70,31,135] |
-2 |
hSpCas9 |
negative selection |
2138234 |
19950908 |
19950931 |
3 |
+ |
26627737 |
HCT116 |
viability after 18 days |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
1.458311243351845 |
[189] |
[221,223,315] |
9 |
hSpCas9 |
negative selection |
2220548 |
19950909 |
19950932 |
3 |
+ |
26627737 |
HCT116 |
viability after 18 days |
GAGGCGCAACAAGACCCAACGGG |
RAB5A |
ENSG00000144566 |
-0.5414837093689971 |
[161] |
[21,61,77] |
-5 |
hSpCas9 |
negative selection |
2220549 |
19964972 |
19964995 |
3 |
- |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
TACACCACTGCATTCCAGCCTAG |
RAB5A |
ENSG00000144566 |
0.5914306786217665 |
[214,131] |
[58,55] |
2 |
dCas9-VP64 |
positive selection |
2387196 |
19970027 |
19970050 |
3 |
- |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
GGTGGGTGGATCACAAGGTCTGG |
RAB5A |
ENSG00000144566 |
7.202920170586078 |
[87,43] |
[405,4032] |
9 |
dCas9-VP64 |
positive selection |
2429600 |
19970127 |
19970150 |
3 |
- |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
GGTGGGTGGATCACAAGGTCTGG |
RAB5A |
ENSG00000144566 |
7.202920170586078 |
[87,43] |
[405,4032] |
9 |
dCas9-VP64 |
positive selection |
2429602 |
19953473 |
19953496 |
3 |
- |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
GCGGAGGTTGCAGTGAGCCAGGG |
RAB5A |
ENSG00000144566 |
0.7460875795897541 |
[229,125] |
[97,29] |
3 |
dCas9-VP64 |
positive selection |
2438714 |
19969829 |
19969852 |
3 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
GGAGTCTCACTCTGTCACCCAGG |
RAB5A |
ENSG00000144566 |
0.5662063265134789 |
[296,266] |
[152,24] |
2 |
dCas9-VP64 |
positive selection |
2439474 |
19964972 |
19964995 |
3 |
- |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
TACACCACTGCATTCCAGCCTAG |
RAB5A |
ENSG00000144566 |
-0.37747874830615435 |
[626,633] |
[195,122] |
-4 |
dCas9-VP64 |
positive selection |
2482451 |
19970027 |
19970050 |
3 |
- |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
GGTGGGTGGATCACAAGGTCTGG |
RAB5A |
ENSG00000144566 |
1.0563740175773226 |
[49,79] |
[37,48] |
6 |
dCas9-VP64 |
positive selection |
2524855 |
19970127 |
19970150 |
3 |
- |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
GGTGGGTGGATCACAAGGTCTGG |
RAB5A |
ENSG00000144566 |
1.0563740175773226 |
[49,79] |
[37,48] |
6 |
dCas9-VP64 |
positive selection |
2524857 |
19953473 |
19953496 |
3 |
- |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
GCGGAGGTTGCAGTGAGCCAGGG |
RAB5A |
ENSG00000144566 |
4.721891124701559 |
[222,102] |
[98,2655] |
9 |
dCas9-VP64 |
positive selection |
2533969 |
19969829 |
19969852 |
3 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
GGAGTCTCACTCTGTCACCCAGG |
RAB5A |
ENSG00000144566 |
-0.8868396810076964 |
[300,188] |
[54,31] |
-8 |
dCas9-VP64 |
positive selection |
2534729 |
19950971 |
19950994 |
3 |
+ |
27260157 |
DLD1 |
viability |
CTTCTGGGAGAGTCCGCTGTTGG |
RAB5A |
ENSG00000144566 |
0.927605787711448 |
[] |
[] |
9 |
hSpCas9 |
negative selection |
2575602 |
19970567 |
19970590 |
3 |
+ |
27260157 |
DLD1 |
viability |
AGCTGTTTCTTTGTGAAATATGG |
RAB5A |
ENSG00000144566 |
-0.123786337910449 |
[] |
[] |
-1 |
hSpCas9 |
negative selection |
2578214 |
19950919 |
19950942 |
3 |
+ |
27260157 |
DLD1 |
viability |
AAGACCCAACGGGCCAAATACGG |
RAB5A |
ENSG00000144566 |
1.52981093695491 |
[] |
[] |
9 |
hSpCas9 |
negative selection |
2619228 |
19970568 |
19970591 |
3 |
+ |
27260157 |
DLD1 |
viability |
GCTGTTTCTTTGTGAAATATGGG |
RAB5A |
ENSG00000144566 |
-0.541491258805894 |
[] |
[] |
-4 |
hSpCas9 |
negative selection |
2622760 |
19950908 |
19950931 |
3 |
+ |
27260157 |
DLD1 |
viability |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
0.694835493801828 |
[] |
[] |
8 |
hSpCas9 |
negative selection |
2623931 |
19975588 |
19975611 |
3 |
- |
27260157 |
DLD1 |
viability |
AGAAAAGCAGCTGAAAGAAAAGG |
RAB5A |
ENSG00000144566 |
0.818954453377465 |
[] |
[] |
9 |
hSpCas9 |
negative selection |
2623937 |
19951053 |
19951076 |
3 |
- |
27260157 |
DLD1 |
viability |
AAAGAAAATCTCACCCCCAATGG |
RAB5A |
ENSG00000144566 |
0.543852921681282 |
[] |
[] |
8 |
hSpCas9 |
negative selection |
2644052 |
19950890 |
19950913 |
3 |
+ |
27260157 |
DLD1 |
viability |
AATTTGGACATGGCTAGTCGAGG |
RAB5A |
ENSG00000144566 |
-0.0311630434487046 |
[] |
[] |
0 |
hSpCas9 |
negative selection |
2645268 |
19950971 |
19950994 |
3 |
+ |
27260157 |
HT1080 |
viability |
CTTCTGGGAGAGTCCGCTGTTGG |
RAB5A |
ENSG00000144566 |
-0.21091520879952 |
[] |
[] |
0 |
hSpCas9 |
negative selection |
2651732 |
19970567 |
19970590 |
3 |
+ |
27260157 |
HT1080 |
viability |
AGCTGTTTCTTTGTGAAATATGG |
RAB5A |
ENSG00000144566 |
-0.36829543221944 |
[] |
[] |
-7 |
hSpCas9 |
negative selection |
2654344 |
19950919 |
19950942 |
3 |
+ |
27260157 |
HT1080 |
viability |
AAGACCCAACGGGCCAAATACGG |
RAB5A |
ENSG00000144566 |
1.85361920090532 |
[] |
[] |
9 |
hSpCas9 |
negative selection |
2695358 |
19970568 |
19970591 |
3 |
+ |
27260157 |
HT1080 |
viability |
GCTGTTTCTTTGTGAAATATGGG |
RAB5A |
ENSG00000144566 |
0.121819093851391 |
[] |
[] |
1 |
hSpCas9 |
negative selection |
2698890 |
19950908 |
19950931 |
3 |
+ |
27260157 |
HT1080 |
viability |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
0.126925629678789 |
[] |
[] |
1 |
hSpCas9 |
negative selection |
2700061 |
19975588 |
19975611 |
3 |
- |
27260157 |
HT1080 |
viability |
AGAAAAGCAGCTGAAAGAAAAGG |
RAB5A |
ENSG00000144566 |
0.724218553158052 |
[] |
[] |
6 |
hSpCas9 |
negative selection |
2700067 |
19951053 |
19951076 |
3 |
- |
27260157 |
HT1080 |
viability |
AAAGAAAATCTCACCCCCAATGG |
RAB5A |
ENSG00000144566 |
0.593029631950037 |
[] |
[] |
5 |
hSpCas9 |
negative selection |
2720182 |
19950890 |
19950913 |
3 |
+ |
27260157 |
HT1080 |
viability |
AATTTGGACATGGCTAGTCGAGG |
RAB5A |
ENSG00000144566 |
0.622426337232319 |
[] |
[] |
5 |
hSpCas9 |
negative selection |
2721398 |
19950971 |
19950994 |
3 |
+ |
27260157 |
MKN45 |
viability |
CTTCTGGGAGAGTCCGCTGTTGG |
RAB5A |
ENSG00000144566 |
-0.0839730613876111 |
[] |
[] |
0 |
hSpCas9 |
negative selection |
2727862 |
19970567 |
19970590 |
3 |
+ |
27260157 |
MKN45 |
viability |
AGCTGTTTCTTTGTGAAATATGG |
RAB5A |
ENSG00000144566 |
0.0335666539101629 |
[] |
[] |
0 |
hSpCas9 |
negative selection |
2730474 |
19950919 |
19950942 |
3 |
+ |
27260157 |
MKN45 |
viability |
AAGACCCAACGGGCCAAATACGG |
RAB5A |
ENSG00000144566 |
0.573766043261081 |
[] |
[] |
7 |
hSpCas9 |
negative selection |
2771488 |
19970568 |
19970591 |
3 |
+ |
27260157 |
MKN45 |
viability |
GCTGTTTCTTTGTGAAATATGGG |
RAB5A |
ENSG00000144566 |
0.914493267075355 |
[] |
[] |
8 |
hSpCas9 |
negative selection |
2775020 |
19950908 |
19950931 |
3 |
+ |
27260157 |
MKN45 |
viability |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
1.23241876584874 |
[] |
[] |
9 |
hSpCas9 |
negative selection |
2776191 |
19975588 |
19975611 |
3 |
- |
27260157 |
MKN45 |
viability |
AGAAAAGCAGCTGAAAGAAAAGG |
RAB5A |
ENSG00000144566 |
1.21308557835338 |
[] |
[] |
9 |
hSpCas9 |
negative selection |
2776197 |
19951053 |
19951076 |
3 |
- |
27260157 |
MKN45 |
viability |
AAAGAAAATCTCACCCCCAATGG |
RAB5A |
ENSG00000144566 |
0.284157251008785 |
[] |
[] |
5 |
hSpCas9 |
negative selection |
2796312 |
19950890 |
19950913 |
3 |
+ |
27260157 |
MKN45 |
viability |
AATTTGGACATGGCTAGTCGAGG |
RAB5A |
ENSG00000144566 |
-0.133993884793129 |
[] |
[] |
0 |
hSpCas9 |
negative selection |
2797528 |
19950971 |
19950994 |
3 |
+ |
27260157 |
RKO |
viability |
CTTCTGGGAGAGTCCGCTGTTGG |
RAB5A |
ENSG00000144566 |
0.0279371514961229 |
[] |
[] |
0 |
hSpCas9 |
negative selection |
2803992 |
19970567 |
19970590 |
3 |
+ |
27260157 |
RKO |
viability |
AGCTGTTTCTTTGTGAAATATGG |
RAB5A |
ENSG00000144566 |
0.428212000047636 |
[] |
[] |
2 |
hSpCas9 |
negative selection |
2806604 |
19950919 |
19950942 |
3 |
+ |
27260157 |
RKO |
viability |
AAGACCCAACGGGCCAAATACGG |
RAB5A |
ENSG00000144566 |
0.884033441161425 |
[] |
[] |
8 |
hSpCas9 |
negative selection |
2847618 |
19970568 |
19970591 |
3 |
+ |
27260157 |
RKO |
viability |
GCTGTTTCTTTGTGAAATATGGG |
RAB5A |
ENSG00000144566 |
-0.445091153222945 |
[] |
[] |
-6 |
hSpCas9 |
negative selection |
2851150 |
19950908 |
19950931 |
3 |
+ |
27260157 |
RKO |
viability |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
1.46276224492339 |
[] |
[] |
9 |
hSpCas9 |
negative selection |
2852321 |
19975588 |
19975611 |
3 |
- |
27260157 |
RKO |
viability |
AGAAAAGCAGCTGAAAGAAAAGG |
RAB5A |
ENSG00000144566 |
1.15165334154396 |
[] |
[] |
9 |
hSpCas9 |
negative selection |
2852327 |
19951053 |
19951076 |
3 |
- |
27260157 |
RKO |
viability |
AAAGAAAATCTCACCCCCAATGG |
RAB5A |
ENSG00000144566 |
0.578699853514153 |
[] |
[] |
3 |
hSpCas9 |
negative selection |
2872442 |
19950890 |
19950913 |
3 |
+ |
27260157 |
RKO |
viability |
AATTTGGACATGGCTAGTCGAGG |
RAB5A |
ENSG00000144566 |
0.177690676788842 |
[] |
[] |
0 |
hSpCas9 |
negative selection |
2873658 |
19950971 |
19950994 |
3 |
+ |
27260157 |
SF268 |
viability |
CTTCTGGGAGAGTCCGCTGTTGG |
RAB5A |
ENSG00000144566 |
0.901353286420503 |
[] |
[] |
9 |
hSpCas9 |
negative selection |
2880122 |
19970567 |
19970590 |
3 |
+ |
27260157 |
SF268 |
viability |
AGCTGTTTCTTTGTGAAATATGG |
RAB5A |
ENSG00000144566 |
0.430309104961542 |
[] |
[] |
7 |
hSpCas9 |
negative selection |
2882734 |
19950919 |
19950942 |
3 |
+ |
27260157 |
SF268 |
viability |
AAGACCCAACGGGCCAAATACGG |
RAB5A |
ENSG00000144566 |
1.13493482409327 |
[] |
[] |
9 |
hSpCas9 |
negative selection |
2923748 |
19970568 |
19970591 |
3 |
+ |
27260157 |
SF268 |
viability |
GCTGTTTCTTTGTGAAATATGGG |
RAB5A |
ENSG00000144566 |
-0.311975625862974 |
[] |
[] |
-2 |
hSpCas9 |
negative selection |
2927280 |
19950908 |
19950931 |
3 |
+ |
27260157 |
SF268 |
viability |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
1.43070766150759 |
[] |
[] |
9 |
hSpCas9 |
negative selection |
2928451 |
19975588 |
19975611 |
3 |
- |
27260157 |
SF268 |
viability |
AGAAAAGCAGCTGAAAGAAAAGG |
RAB5A |
ENSG00000144566 |
0.742947376916848 |
[] |
[] |
8 |
hSpCas9 |
negative selection |
2928457 |
19951053 |
19951076 |
3 |
- |
27260157 |
SF268 |
viability |
AAAGAAAATCTCACCCCCAATGG |
RAB5A |
ENSG00000144566 |
0.639235414304166 |
[] |
[] |
8 |
hSpCas9 |
negative selection |
2948572 |
19950890 |
19950913 |
3 |
+ |
27260157 |
SF268 |
viability |
AATTTGGACATGGCTAGTCGAGG |
RAB5A |
ENSG00000144566 |
0.416195011985268 |
[] |
[] |
4 |
hSpCas9 |
negative selection |
2949788 |
19950909 |
19950932 |
3 |
+ |
27453484 |
HT29 |
resistance to T3SS1-dependent cytotoxicity |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
-0.479892157174778 |
[3,2] |
[3,0] |
-6 |
hSpCas9 |
positive selection |
3015317 |
19975691 |
19975714 |
3 |
+ |
27453484 |
HT29 |
resistance to T3SS1-dependent cytotoxicity |
CTAGCACCAATGTACTACAGAGG |
RAB5A |
ENSG00000144566 |
0.06073191063127609 |
[5,4] |
[4,4] |
1 |
hSpCas9 |
positive selection |
3015318 |
19975696 |
19975719 |
3 |
- |
27453484 |
HT29 |
resistance to T3SS1-dependent cytotoxicity |
TGTGCTCCTCTGTAGTACATTGG |
RAB5A |
ENSG00000144566 |
-0.24717767075909308 |
[4,4] |
[4,2] |
-4 |
hSpCas9 |
positive selection |
3015319 |
19950923 |
19950946 |
3 |
- |
27453484 |
HT29 |
resistance to T3SS1-dependent cytotoxicity |
TTTCCCGTATTTGGCCCGTTGGG |
RAB5A |
ENSG00000144566 |
0.2626535108301793 |
[5,5] |
[5,5] |
5 |
hSpCas9 |
positive selection |
3015320 |
19950909 |
19950932 |
3 |
+ |
27453484 |
HT29 |
resistance to T3SS2-dependent cytotoxicity |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
-0.46291822517456815 |
[3,3] |
[2,0] |
-6 |
hSpCas9 |
positive selection |
3083175 |
19975691 |
19975714 |
3 |
+ |
27453484 |
HT29 |
resistance to T3SS2-dependent cytotoxicity |
CTAGCACCAATGTACTACAGAGG |
RAB5A |
ENSG00000144566 |
0.3377970202572258 |
[5,5] |
[4,4] |
6 |
hSpCas9 |
positive selection |
3083176 |
19975696 |
19975719 |
3 |
- |
27453484 |
HT29 |
resistance to T3SS2-dependent cytotoxicity |
TGTGCTCCTCTGTAGTACATTGG |
RAB5A |
ENSG00000144566 |
-0.2372909299225991 |
[4,4] |
[3,1] |
-3 |
hSpCas9 |
positive selection |
3083177 |
19950923 |
19950946 |
3 |
- |
27453484 |
HT29 |
resistance to T3SS2-dependent cytotoxicity |
TTTCCCGTATTTGGCCCGTTGGG |
RAB5A |
ENSG00000144566 |
0.3066781840814997 |
[5,5] |
[4,4] |
5 |
hSpCas9 |
positive selection |
3083178 |
19976101 |
19976124 |
|
- |
24336571 |
A375 |
resistance to PLX after 7 days |
GATAAAGCTATTACAATGTTAGG |
RAB5A |
ENSG00000144566 |
-0.3970952783453473 |
[12,8] |
[7,7] |
-9 |
hSpCas9 |
positive selection |
3139424 |
19976103 |
19976126 |
|
+ |
24336571 |
A375 |
resistance to PLX after 7 days |
TAACATTGTAATAGCTTTATCGG |
RAB5A |
ENSG00000144566 |
-0.08001907744876072 |
[13,11] |
[10,12] |
-2 |
hSpCas9 |
positive selection |
3139425 |
19975614 |
19975637 |
|
- |
24336571 |
A375 |
resistance to PLX after 7 days |
TGTCATCAAGACATACAGTTTGG |
RAB5A |
ENSG00000144566 |
-0.026571848836002054 |
[6,7] |
[7,5] |
0 |
hSpCas9 |
positive selection |
3139426 |
19975724 |
19975747 |
|
- |
24336571 |
A375 |
resistance to PLX after 7 days |
TGTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
0.01575681466208284 |
[10,11] |
[9,12] |
0 |
hSpCas9 |
positive selection |
3139427 |
19976101 |
19976124 |
|
- |
24336571 |
A375 |
resistance to PLX after 14 days |
GATAAAGCTATTACAATGTTAGG |
RAB5A |
ENSG00000144566 |
-0.5078074146594959 |
[11,7] |
[2,2] |
-6 |
hSpCas9 |
positive selection |
3197217 |
19976103 |
19976126 |
|
+ |
24336571 |
A375 |
resistance to PLX after 14 days |
TAACATTGTAATAGCTTTATCGG |
RAB5A |
ENSG00000144566 |
-0.1144042758949691 |
[12,8] |
[5,2] |
-1 |
hSpCas9 |
positive selection |
3197218 |
19975614 |
19975637 |
|
- |
24336571 |
A375 |
resistance to PLX after 14 days |
TGTCATCAAGACATACAGTTTGG |
RAB5A |
ENSG00000144566 |
0.006419567849017649 |
[5,7] |
[2,3] |
0 |
hSpCas9 |
positive selection |
3197219 |
19975724 |
19975747 |
|
- |
24336571 |
A375 |
resistance to PLX after 14 days |
TGTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
-0.48782355093967583 |
[12,12] |
[3,3] |
-6 |
hSpCas9 |
positive selection |
3197220 |
19976101 |
19976124 |
|
- |
24336571 |
A375 |
viability after 7 days |
GATAAAGCTATTACAATGTTAGG |
RAB5A |
ENSG00000144566 |
0.268221081423608 |
[8] |
[12,8] |
4 |
hSpCas9 |
negative selection |
3255010 |
19976103 |
19976126 |
|
+ |
24336571 |
A375 |
viability after 7 days |
TAACATTGTAATAGCTTTATCGG |
RAB5A |
ENSG00000144566 |
0.15774288664653024 |
[11] |
[13,11] |
2 |
hSpCas9 |
negative selection |
3255011 |
19975614 |
19975637 |
|
- |
24336571 |
A375 |
viability after 7 days |
TGTCATCAAGACATACAGTTTGG |
RAB5A |
ENSG00000144566 |
-0.02949495089002374 |
[7] |
[6,7] |
0 |
hSpCas9 |
negative selection |
3255012 |
19975724 |
19975747 |
|
- |
24336571 |
A375 |
viability after 7 days |
TGTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
-0.6318678978437222 |
[18] |
[10,11] |
-7 |
hSpCas9 |
negative selection |
3255013 |
19976101 |
19976124 |
|
- |
24336571 |
A375 |
viability after 14 days |
GATAAAGCTATTACAATGTTAGG |
RAB5A |
ENSG00000144566 |
0.19371529128816378 |
[8] |
[11,7] |
2 |
hSpCas9 |
negative selection |
3312803 |
19976103 |
19976126 |
|
+ |
24336571 |
A375 |
viability after 14 days |
TAACATTGTAATAGCTTTATCGG |
RAB5A |
ENSG00000144566 |
-0.01869666256621541 |
[11] |
[12,8] |
0 |
hSpCas9 |
negative selection |
3312804 |
19975614 |
19975637 |
|
- |
24336571 |
A375 |
viability after 14 days |
TGTCATCAAGACATACAGTTTGG |
RAB5A |
ENSG00000144566 |
-0.06041269090291035 |
[7] |
[5,7] |
0 |
hSpCas9 |
negative selection |
3312805 |
19975724 |
19975747 |
|
- |
24336571 |
A375 |
viability after 14 days |
TGTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
-0.45808092065596245 |
[18] |
[12,12] |
-5 |
hSpCas9 |
negative selection |
3312806 |
19975614 |
19975637 |
3 |
- |
27383988 |
293T |
resistance to West Nile virus (flavivirus) |
TGTCATCAAGACATACAGTTTGG |
RAB5A |
ENSG00000144566 |
-0.8459615969661868 |
[274,274] |
[0,0] |
-6 |
hSpCas9 |
positive selection |
3388721 |
19976101 |
19976124 |
3 |
- |
27383988 |
293T |
resistance to West Nile virus (flavivirus) |
GATAAAGCTATTACAATGTTAGG |
RAB5A |
ENSG00000144566 |
-1.2464995265499157 |
[362,362] |
[0,0] |
-8 |
hSpCas9 |
positive selection |
3388722 |
19978330 |
19978353 |
3 |
+ |
27383988 |
293T |
resistance to West Nile virus (flavivirus) |
TGACAATAGTTTATTATTCATGG |
RAB5A |
ENSG00000144566 |
-1.803369720241719 |
[533,533] |
[0,0] |
-9 |
hSpCas9 |
positive selection |
3388723 |
19950908 |
19950931 |
3 |
+ |
26780180 |
HT29 |
viability (Avana library 4 designs) |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
1.76722260054863 |
[] |
[] |
6 |
hSpCas9 |
negative selection |
3453573 |
19975690 |
19975713 |
3 |
+ |
26780180 |
HT29 |
viability (Avana library 4 designs) |
CTAGCACCAATGTACTACAGAGG |
RAB5A |
ENSG00000144566 |
0.62680610207791 |
[] |
[] |
2 |
hSpCas9 |
negative selection |
3453574 |
19975696 |
19975719 |
3 |
- |
26780180 |
HT29 |
viability (Avana library 4 designs) |
TGTGCTCCTCTGTAGTACATTGG |
RAB5A |
ENSG00000144566 |
0.808364149712649 |
[] |
[] |
3 |
hSpCas9 |
negative selection |
3453575 |
19950923 |
19950946 |
3 |
- |
26780180 |
HT29 |
viability (Avana library 4 designs) |
TTTCCCGTATTTGGCCCGTTGGG |
RAB5A |
ENSG00000144566 |
-0.562732698105349 |
[] |
[] |
-7 |
hSpCas9 |
negative selection |
3453576 |
19975690 |
19975713 |
3 |
+ |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
CTAGCACCAATGTACTACAGAGG |
RAB5A |
ENSG00000144566 |
-1.89773219863978 |
[] |
[] |
-2 |
hSpCas9 |
negative selection |
3550497 |
19950908 |
19950931 |
3 |
+ |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
-1.27788247955416 |
[] |
[] |
-1 |
hSpCas9 |
negative selection |
3550498 |
19975696 |
19975719 |
3 |
- |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
TGTGCTCCTCTGTAGTACATTGG |
RAB5A |
ENSG00000144566 |
-0.283423447866104 |
[] |
[] |
0 |
hSpCas9 |
negative selection |
3550499 |
19950923 |
19950946 |
3 |
- |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
TTTCCCGTATTTGGCCCGTTGGG |
RAB5A |
ENSG00000144566 |
4.65280078773477 |
[] |
[] |
7 |
hSpCas9 |
negative selection |
3550500 |
19950890 |
19950913 |
3 |
+ |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
AATTTGGACATGGCTAGTCGAGG |
RAB5A |
ENSG00000144566 |
5.5796623231793 |
[] |
[] |
8 |
hSpCas9 |
negative selection |
3550501 |
19975724 |
19975747 |
3 |
- |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
TGTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
-18.0015087640332 |
[] |
[] |
-9 |
hSpCas9 |
negative selection |
3550502 |
19975690 |
19975713 |
3 |
+ |
26780180 |
A375 |
viability (Avana lentiGuide) |
CTAGCACCAATGTACTACAGAGG |
RAB5A |
ENSG00000144566 |
1.19682294006441 |
[] |
[] |
1 |
hSpCas9 |
negative selection |
3659156 |
19950908 |
19950931 |
3 |
+ |
26780180 |
A375 |
viability (Avana lentiGuide) |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
-9.33775710449182 |
[] |
[] |
-9 |
hSpCas9 |
negative selection |
3659157 |
19975696 |
19975719 |
3 |
- |
26780180 |
A375 |
viability (Avana lentiGuide) |
TGTGCTCCTCTGTAGTACATTGG |
RAB5A |
ENSG00000144566 |
12.7745674563818 |
[] |
[] |
7 |
hSpCas9 |
negative selection |
3659158 |
19950923 |
19950946 |
3 |
- |
26780180 |
A375 |
viability (Avana lentiGuide) |
TTTCCCGTATTTGGCCCGTTGGG |
RAB5A |
ENSG00000144566 |
-2.41859318855859 |
[] |
[] |
-4 |
hSpCas9 |
negative selection |
3659159 |
19950890 |
19950913 |
3 |
+ |
26780180 |
A375 |
viability (Avana lentiGuide) |
AATTTGGACATGGCTAGTCGAGG |
RAB5A |
ENSG00000144566 |
5.01579144695016 |
[] |
[] |
4 |
hSpCas9 |
negative selection |
3659160 |
19975724 |
19975747 |
3 |
- |
26780180 |
A375 |
viability (Avana lentiGuide) |
TGTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
1.49835599373963 |
[] |
[] |
1 |
hSpCas9 |
negative selection |
3659161 |
19975690 |
19975713 |
3 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
CTAGCACCAATGTACTACAGAGG |
RAB5A |
ENSG00000144566 |
-0.20220316780634373 |
[6] |
[4,5] |
-3 |
hSpCas9 |
positive selection |
3767763 |
19950908 |
19950931 |
3 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
0.16806371283194338 |
[3] |
[5,3] |
4 |
hSpCas9 |
positive selection |
3767764 |
19975696 |
19975719 |
3 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
TGTGCTCCTCTGTAGTACATTGG |
RAB5A |
ENSG00000144566 |
-0.19445262268789648 |
[5] |
[5,4] |
-3 |
hSpCas9 |
positive selection |
3767765 |
19950923 |
19950946 |
3 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
TTTCCCGTATTTGGCCCGTTGGG |
RAB5A |
ENSG00000144566 |
0.3048228057320541 |
[6] |
[7,7] |
8 |
hSpCas9 |
positive selection |
3767766 |
19950890 |
19950913 |
3 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
AATTTGGACATGGCTAGTCGAGG |
RAB5A |
ENSG00000144566 |
0.6101400162411247 |
[5] |
[6,10] |
9 |
hSpCas9 |
positive selection |
3767767 |
19975724 |
19975747 |
3 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
TGTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
-0.7360298692340251 |
[11] |
[5,6] |
-8 |
hSpCas9 |
positive selection |
3767768 |
19975690 |
19975713 |
3 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
CTAGCACCAATGTACTACAGAGG |
RAB5A |
ENSG00000144566 |
0.2401279059942359 |
[6] |
[7,6] |
6 |
hSpCas9 |
positive selection |
3876370 |
19950908 |
19950931 |
3 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
-0.7076144288657963 |
[4] |
[2,0] |
-7 |
hSpCas9 |
positive selection |
3876371 |
19975696 |
19975719 |
3 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
TGTGCTCCTCTGTAGTACATTGG |
RAB5A |
ENSG00000144566 |
-0.5922653524328004 |
[6] |
[1,4] |
-6 |
hSpCas9 |
positive selection |
3876372 |
19950923 |
19950946 |
3 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
TTTCCCGTATTTGGCCCGTTGGG |
RAB5A |
ENSG00000144566 |
0.36083310316403916 |
[7] |
[7,8] |
9 |
hSpCas9 |
positive selection |
3876373 |
19950890 |
19950913 |
3 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
AATTTGGACATGGCTAGTCGAGG |
RAB5A |
ENSG00000144566 |
0.06266948606046689 |
[5] |
[4,4] |
1 |
hSpCas9 |
positive selection |
3876374 |
19975724 |
19975747 |
3 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
TGTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
0.2786690057534906 |
[7] |
[7,7] |
7 |
hSpCas9 |
positive selection |
3876375 |
19976101 |
19976124 |
3 |
- |
26780180 |
A375 |
viability |
GATAAAGCTATTACAATGTTAGG |
RAB5A |
ENSG00000144566 |
1.58719203095531 |
[] |
[] |
8 |
hSpCas9 |
negative selection |
3986794 |
19978330 |
19978353 |
3 |
+ |
26780180 |
A375 |
viability |
TGACAATAGTTTATTATTCATGG |
RAB5A |
ENSG00000144566 |
0.534901072930098 |
[] |
[] |
1 |
hSpCas9 |
negative selection |
3986795 |
19975614 |
19975637 |
3 |
- |
26780180 |
A375 |
viability |
TGTCATCAAGACATACAGTTTGG |
RAB5A |
ENSG00000144566 |
0.864659631809099 |
[] |
[] |
3 |
hSpCas9 |
negative selection |
3986796 |
19975724 |
19975747 |
3 |
- |
26780180 |
A375 |
viability |
TGTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
1.40927198958686 |
[] |
[] |
7 |
hSpCas9 |
negative selection |
3986797 |
19976101 |
19976124 |
3 |
- |
26780180 |
HT29 |
viability (GeCKOv2 library) |
GATAAAGCTATTACAATGTTAGG |
RAB5A |
ENSG00000144566 |
0.598003824032855 |
[] |
[] |
2 |
hSpCas9 |
negative selection |
4094760 |
19978330 |
19978353 |
3 |
+ |
26780180 |
HT29 |
viability (GeCKOv2 library) |
TGACAATAGTTTATTATTCATGG |
RAB5A |
ENSG00000144566 |
0.446520815224209 |
[] |
[] |
1 |
hSpCas9 |
negative selection |
4094761 |
19975614 |
19975637 |
3 |
- |
26780180 |
HT29 |
viability (GeCKOv2 library) |
TGTCATCAAGACATACAGTTTGG |
RAB5A |
ENSG00000144566 |
1.14715045056543 |
[] |
[] |
5 |
hSpCas9 |
negative selection |
4094762 |
19975724 |
19975747 |
3 |
- |
26780180 |
HT29 |
viability (GeCKOv2 library) |
TGTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
1.383022050782 |
[] |
[] |
7 |
hSpCas9 |
negative selection |
4094763 |
19976101 |
19976124 |
3 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiCRISPRv1) |
GATAAAGCTATTACAATGTTAGG |
RAB5A |
ENSG00000144566 |
0.1673195566888332 |
[2] |
[2,1] |
4 |
hSpCas9 |
positive selection |
4164753 |
19976103 |
19976126 |
3 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiCRISPRv1) |
TAACATTGTAATAGCTTTATCGG |
RAB5A |
ENSG00000144566 |
0.01997142662237963 |
[3] |
[2,1] |
0 |
hSpCas9 |
positive selection |
4164754 |
19975614 |
19975637 |
3 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiCRISPRv1) |
TGTCATCAAGACATACAGTTTGG |
RAB5A |
ENSG00000144566 |
-0.2755686193600912 |
[2] |
[1,1] |
-6 |
hSpCas9 |
positive selection |
4164755 |
19975724 |
19975747 |
3 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiCRISPRv1) |
TGTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
-0.10648447792188422 |
[3] |
[1,1] |
-2 |
hSpCas9 |
positive selection |
4164756 |
19976101 |
19976124 |
3 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiGuide) |
GATAAAGCTATTACAATGTTAGG |
RAB5A |
ENSG00000144566 |
0.136316695686871 |
[4] |
[4,2,1,0] |
1 |
hSpCas9 |
positive selection |
4228775 |
19976103 |
19976126 |
3 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiGuide) |
TAACATTGTAATAGCTTTATCGG |
RAB5A |
ENSG00000144566 |
-0.07017830844669373 |
[3] |
[1,4,0,0] |
-1 |
hSpCas9 |
positive selection |
4228776 |
19975614 |
19975637 |
3 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiGuide) |
TGTCATCAAGACATACAGTTTGG |
RAB5A |
ENSG00000144566 |
0.9718725852235651 |
[4] |
[4,0,2,4] |
6 |
hSpCas9 |
positive selection |
4228777 |
19975724 |
19975747 |
3 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiGuide) |
TGTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
0.9737478756749303 |
[3] |
[1,2,1,3] |
6 |
hSpCas9 |
positive selection |
4228778 |
19975724 |
19975747 |
3 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
TGTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
0.28691321776619766 |
[2] |
[2,2] |
6 |
hSpCas9 |
positive selection |
4293593 |
19975614 |
19975637 |
3 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
TGTCATCAAGACATACAGTTTGG |
RAB5A |
ENSG00000144566 |
0.20621186880861983 |
[3] |
[3,3] |
4 |
hSpCas9 |
positive selection |
4357850 |
19976101 |
19976124 |
3 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
GATAAAGCTATTACAATGTTAGG |
RAB5A |
ENSG00000144566 |
0.7539840041653676 |
[3] |
[4,5] |
9 |
hSpCas9 |
positive selection |
4357851 |
19978330 |
19978353 |
3 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
TGACAATAGTTTATTATTCATGG |
RAB5A |
ENSG00000144566 |
0.39386382207919574 |
[3] |
[4,3] |
7 |
hSpCas9 |
positive selection |
4357852 |
19950984 |
19951006 |
3 |
- |
27760321 |
OCIAML3 |
viability |
AGGCTTGATTTGCCAACAGCGG |
RAB5A |
ENSG00000144566 |
0.09395823230393965 |
[441,392] |
[294,416] |
1 |
hSpCas9 |
negative selection |
4432688 |
19951038 |
19951060 |
3 |
+ |
27760321 |
OCIAML3 |
viability |
AATTTCAAGAGAGTACCATTGG |
RAB5A |
ENSG00000144566 |
-1.4104365580925649 |
[49,29] |
[11,10] |
-8 |
hSpCas9 |
negative selection |
4432689 |
19975683 |
19975705 |
3 |
- |
27760321 |
OCIAML3 |
viability |
GTACATTGGTGCTAGGCTATGG |
RAB5A |
ENSG00000144566 |
0.3406505635888885 |
[579,511] |
[468,631] |
4 |
hSpCas9 |
negative selection |
4432690 |
19975724 |
19975746 |
3 |
- |
27760321 |
OCIAML3 |
viability |
GTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
-0.8994374905149671 |
[3,0] |
[0,0] |
-7 |
hSpCas9 |
negative selection |
4432691 |
19976113 |
19976135 |
3 |
+ |
27760321 |
OCIAML3 |
viability |
ATAGCTTTATCGGGAAACAAGG |
RAB5A |
ENSG00000144566 |
-0.2266770778565972 |
[110,109] |
[90,51] |
-2 |
hSpCas9 |
negative selection |
4432692 |
19950984 |
19951006 |
3 |
- |
27760321 |
OCIAML2 |
viability |
AGGCTTGATTTGCCAACAGCGG |
RAB5A |
ENSG00000144566 |
0.4445382067205875 |
[441,392] |
[407,525] |
6 |
hSpCas9 |
negative selection |
4516151 |
19951038 |
19951060 |
3 |
+ |
27760321 |
OCIAML2 |
viability |
AATTTCAAGAGAGTACCATTGG |
RAB5A |
ENSG00000144566 |
0.9360154739867732 |
[49,29] |
[62,57] |
9 |
hSpCas9 |
negative selection |
4516152 |
19975683 |
19975705 |
3 |
- |
27760321 |
OCIAML2 |
viability |
GTACATTGGTGCTAGGCTATGG |
RAB5A |
ENSG00000144566 |
0.23352686807895146 |
[579,511] |
[466,585] |
3 |
hSpCas9 |
negative selection |
4516153 |
19975724 |
19975746 |
3 |
- |
27760321 |
OCIAML2 |
viability |
GTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
-0.9481828557800158 |
[3,0] |
[0,0] |
-7 |
hSpCas9 |
negative selection |
4516154 |
19976113 |
19976135 |
3 |
+ |
27760321 |
OCIAML2 |
viability |
ATAGCTTTATCGGGAAACAAGG |
RAB5A |
ENSG00000144566 |
-0.35115720391741023 |
[110,109] |
[49,96] |
-4 |
hSpCas9 |
negative selection |
4516155 |
19950984 |
19951006 |
3 |
- |
27760321 |
MV411 |
viability |
AGGCTTGATTTGCCAACAGCGG |
RAB5A |
ENSG00000144566 |
0.2592065952120436 |
[441,392] |
[363,276] |
1 |
hSpCas9 |
negative selection |
4599614 |
19951038 |
19951060 |
3 |
+ |
27760321 |
MV411 |
viability |
AATTTCAAGAGAGTACCATTGG |
RAB5A |
ENSG00000144566 |
-4.697163939329805 |
[49,29] |
[0,0] |
-9 |
hSpCas9 |
negative selection |
4599615 |
19975683 |
19975705 |
3 |
- |
27760321 |
MV411 |
viability |
GTACATTGGTGCTAGGCTATGG |
RAB5A |
ENSG00000144566 |
-0.23509374537590805 |
[579,511] |
[265,364] |
-2 |
hSpCas9 |
negative selection |
4599616 |
19975724 |
19975746 |
3 |
- |
27760321 |
MV411 |
viability |
GTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
2.024385725441488 |
[3,0] |
[9,0] |
9 |
hSpCas9 |
negative selection |
4599617 |
19976113 |
19976135 |
3 |
+ |
27760321 |
MV411 |
viability |
ATAGCTTTATCGGGAAACAAGG |
RAB5A |
ENSG00000144566 |
-0.6513328667065386 |
[110,109] |
[0,114] |
-4 |
hSpCas9 |
negative selection |
4599618 |
19950984 |
19951006 |
3 |
- |
27760321 |
HL60 |
viability |
AGGCTTGATTTGCCAACAGCGG |
RAB5A |
ENSG00000144566 |
0.7157201072740338 |
[441,392] |
[616,497] |
7 |
hSpCas9 |
negative selection |
4683077 |
19951038 |
19951060 |
3 |
+ |
27760321 |
HL60 |
viability |
AATTTCAAGAGAGTACCATTGG |
RAB5A |
ENSG00000144566 |
-0.04597793624293267 |
[49,29] |
[17,44] |
0 |
hSpCas9 |
negative selection |
4683078 |
19975683 |
19975705 |
3 |
- |
27760321 |
HL60 |
viability |
GTACATTGGTGCTAGGCTATGG |
RAB5A |
ENSG00000144566 |
0.23828935232126341 |
[579,511] |
[347,712] |
3 |
hSpCas9 |
negative selection |
4683079 |
19975724 |
19975746 |
3 |
- |
27760321 |
HL60 |
viability |
GTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
-0.9622290833944218 |
[3,0] |
[0,0] |
-7 |
hSpCas9 |
negative selection |
4683080 |
19976113 |
19976135 |
3 |
+ |
27760321 |
HL60 |
viability |
ATAGCTTTATCGGGAAACAAGG |
RAB5A |
ENSG00000144566 |
-0.23711413289753924 |
[110,109] |
[86,65] |
-3 |
hSpCas9 |
negative selection |
4683081 |
19950984 |
19951006 |
3 |
- |
27760321 |
HT1080 |
viability |
AGGCTTGATTTGCCAACAGCGG |
RAB5A |
ENSG00000144566 |
0.12825078179465285 |
[392,306] |
[65,246] |
0 |
hSpCas9 |
negative selection |
4766540 |
19951038 |
19951060 |
3 |
+ |
27760321 |
HT1080 |
viability |
AATTTCAAGAGAGTACCATTGG |
RAB5A |
ENSG00000144566 |
-3.429279739642115 |
[29,23] |
[0,0] |
-7 |
hSpCas9 |
negative selection |
4766541 |
19975683 |
19975705 |
3 |
- |
27760321 |
HT1080 |
viability |
GTACATTGGTGCTAGGCTATGG |
RAB5A |
ENSG00000144566 |
0.7113548330899724 |
[511,399] |
[306,286] |
4 |
hSpCas9 |
negative selection |
4766542 |
19975724 |
19975746 |
3 |
- |
27760321 |
HT1080 |
viability |
GTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
1.3056276939190559 |
[0,0] |
[0,0] |
7 |
hSpCas9 |
negative selection |
4766543 |
19976113 |
19976135 |
3 |
+ |
27760321 |
HT1080 |
viability |
ATAGCTTTATCGGGAAACAAGG |
RAB5A |
ENSG00000144566 |
2.115852988423506 |
[109,85] |
[110,232] |
9 |
hSpCas9 |
negative selection |
4766544 |
19950984 |
19951006 |
3 |
- |
27760321 |
HT29 |
viability after 7 days |
AGGCTTGATTTGCCAACAGCGG |
RAB5A |
ENSG00000144566 |
-0.2873362268528198 |
[392,306] |
[415,280,413] |
-4 |
hSpCas9 |
negative selection |
4850003 |
19951038 |
19951060 |
3 |
+ |
27760321 |
HT29 |
viability after 7 days |
AATTTCAAGAGAGTACCATTGG |
RAB5A |
ENSG00000144566 |
-0.3717877980669222 |
[29,23] |
[19,13,44] |
-5 |
hSpCas9 |
negative selection |
4850004 |
19975683 |
19975705 |
3 |
- |
27760321 |
HT29 |
viability after 7 days |
GTACATTGGTGCTAGGCTATGG |
RAB5A |
ENSG00000144566 |
0.4145958832129058 |
[511,399] |
[855,841,659] |
6 |
hSpCas9 |
negative selection |
4850005 |
19975724 |
19975746 |
3 |
- |
27760321 |
HT29 |
viability after 7 days |
GTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
0.6511253818866871 |
[0,0] |
[0,2,1] |
8 |
hSpCas9 |
negative selection |
4850006 |
19976113 |
19976135 |
3 |
+ |
27760321 |
HT29 |
viability after 7 days |
ATAGCTTTATCGGGAAACAAGG |
RAB5A |
ENSG00000144566 |
-0.6010800575058719 |
[109,85] |
[181,54,27] |
-7 |
hSpCas9 |
negative selection |
4850007 |
19950984 |
19951006 |
3 |
- |
27760321 |
HT29 |
viability after 25 days |
AGGCTTGATTTGCCAACAGCGG |
RAB5A |
ENSG00000144566 |
-0.0059956202964170716 |
[392,306] |
[319,492,384] |
0 |
hSpCas9 |
negative selection |
4933466 |
19951038 |
19951060 |
3 |
+ |
27760321 |
HT29 |
viability after 25 days |
AATTTCAAGAGAGTACCATTGG |
RAB5A |
ENSG00000144566 |
-0.04215351491460462 |
[29,23] |
[3,19,71] |
0 |
hSpCas9 |
negative selection |
4933467 |
19975683 |
19975705 |
3 |
- |
27760321 |
HT29 |
viability after 25 days |
GTACATTGGTGCTAGGCTATGG |
RAB5A |
ENSG00000144566 |
0.14345284494089916 |
[511,399] |
[568,585,570] |
1 |
hSpCas9 |
negative selection |
4933468 |
19975724 |
19975746 |
3 |
- |
27760321 |
HT29 |
viability after 25 days |
GTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
-0.21405457092746794 |
[0,0] |
[0,0,0] |
-2 |
hSpCas9 |
negative selection |
4933469 |
19976113 |
19976135 |
3 |
+ |
27760321 |
HT29 |
viability after 25 days |
ATAGCTTTATCGGGAAACAAGG |
RAB5A |
ENSG00000144566 |
-1.3658449741380736 |
[109,85] |
[50,33,44] |
-7 |
hSpCas9 |
negative selection |
4933470 |
19950984 |
19951006 |
3 |
- |
27760321 |
HT29 |
viability after 22 days |
AGGCTTGATTTGCCAACAGCGG |
RAB5A |
ENSG00000144566 |
-0.020366247421858663 |
[392,306] |
[347,478,370] |
0 |
hSpCas9 |
negative selection |
5016929 |
19951038 |
19951060 |
3 |
+ |
27760321 |
HT29 |
viability after 22 days |
AATTTCAAGAGAGTACCATTGG |
RAB5A |
ENSG00000144566 |
-0.3008246572979498 |
[29,23] |
[27,28,18] |
-3 |
hSpCas9 |
negative selection |
5016930 |
19975683 |
19975705 |
3 |
- |
27760321 |
HT29 |
viability after 22 days |
GTACATTGGTGCTAGGCTATGG |
RAB5A |
ENSG00000144566 |
0.3711706530501994 |
[511,399] |
[524,928,594] |
4 |
hSpCas9 |
negative selection |
5016931 |
19975724 |
19975746 |
3 |
- |
27760321 |
HT29 |
viability after 22 days |
GTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
-0.23137320278672746 |
[0,0] |
[0,0,0] |
-2 |
hSpCas9 |
negative selection |
5016932 |
19976113 |
19976135 |
3 |
+ |
27760321 |
HT29 |
viability after 22 days |
ATAGCTTTATCGGGAAACAAGG |
RAB5A |
ENSG00000144566 |
-0.6420149372168458 |
[109,85] |
[137,10,66] |
-5 |
hSpCas9 |
negative selection |
5016933 |
19950984 |
19951006 |
3 |
- |
27760321 |
HT29 |
viability after 19 days |
AGGCTTGATTTGCCAACAGCGG |
RAB5A |
ENSG00000144566 |
0.013360354119783029 |
[392,306] |
[351,332,516] |
0 |
hSpCas9 |
negative selection |
5100392 |
19951038 |
19951060 |
3 |
+ |
27760321 |
HT29 |
viability after 19 days |
AATTTCAAGAGAGTACCATTGG |
RAB5A |
ENSG00000144566 |
-0.5122967707133474 |
[29,23] |
[11,2,47] |
-4 |
hSpCas9 |
negative selection |
5100393 |
19975683 |
19975705 |
3 |
- |
27760321 |
HT29 |
viability after 19 days |
GTACATTGGTGCTAGGCTATGG |
RAB5A |
ENSG00000144566 |
-0.5319800194120303 |
[511,399] |
[378,322,380] |
-4 |
hSpCas9 |
negative selection |
5100394 |
19975724 |
19975746 |
3 |
- |
27760321 |
HT29 |
viability after 19 days |
GTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
-0.21553315036351428 |
[0,0] |
[0,0,0] |
-2 |
hSpCas9 |
negative selection |
5100395 |
19976113 |
19976135 |
3 |
+ |
27760321 |
HT29 |
viability after 19 days |
ATAGCTTTATCGGGAAACAAGG |
RAB5A |
ENSG00000144566 |
-1.2133770151842411 |
[109,85] |
[135,18,0] |
-7 |
hSpCas9 |
negative selection |
5100396 |
19950984 |
19951006 |
3 |
- |
27760321 |
HT29 |
viability after 16 days |
AGGCTTGATTTGCCAACAGCGG |
RAB5A |
ENSG00000144566 |
-0.05521312197248233 |
[392,306] |
[638,238,280] |
0 |
hSpCas9 |
negative selection |
5183855 |
19951038 |
19951060 |
3 |
+ |
27760321 |
HT29 |
viability after 16 days |
AATTTCAAGAGAGTACCATTGG |
RAB5A |
ENSG00000144566 |
-0.6267583301759894 |
[29,23] |
[23,26,7] |
-5 |
hSpCas9 |
negative selection |
5183856 |
19975683 |
19975705 |
3 |
- |
27760321 |
HT29 |
viability after 16 days |
GTACATTGGTGCTAGGCTATGG |
RAB5A |
ENSG00000144566 |
0.09337724852682294 |
[511,399] |
[435,568,616] |
1 |
hSpCas9 |
negative selection |
5183857 |
19975724 |
19975746 |
3 |
- |
27760321 |
HT29 |
viability after 16 days |
GTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
-0.1840686979425925 |
[0,0] |
[0,0,0] |
-2 |
hSpCas9 |
negative selection |
5183858 |
19976113 |
19976135 |
3 |
+ |
27760321 |
HT29 |
viability after 16 days |
ATAGCTTTATCGGGAAACAAGG |
RAB5A |
ENSG00000144566 |
-0.7577859173113419 |
[109,85] |
[126,3,70] |
-6 |
hSpCas9 |
negative selection |
5183859 |
19950984 |
19951006 |
3 |
- |
27760321 |
HT29 |
viability after 13 days |
AGGCTTGATTTGCCAACAGCGG |
RAB5A |
ENSG00000144566 |
-0.12009711632558612 |
[392,306] |
[357,442,322] |
-1 |
hSpCas9 |
negative selection |
5267318 |
19951038 |
19951060 |
3 |
+ |
27760321 |
HT29 |
viability after 13 days |
AATTTCAAGAGAGTACCATTGG |
RAB5A |
ENSG00000144566 |
-0.5101747965453063 |
[29,23] |
[2,21,39] |
-5 |
hSpCas9 |
negative selection |
5267319 |
19975683 |
19975705 |
3 |
- |
27760321 |
HT29 |
viability after 13 days |
GTACATTGGTGCTAGGCTATGG |
RAB5A |
ENSG00000144566 |
0.09294316856719287 |
[511,399] |
[514,685,495] |
1 |
hSpCas9 |
negative selection |
5267320 |
19975724 |
19975746 |
3 |
- |
27760321 |
HT29 |
viability after 13 days |
GTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
2.4773601137338774 |
[0,0] |
[17,0,0] |
9 |
hSpCas9 |
negative selection |
5267321 |
19976113 |
19976135 |
3 |
+ |
27760321 |
HT29 |
viability after 13 days |
ATAGCTTTATCGGGAAACAAGG |
RAB5A |
ENSG00000144566 |
-0.7138346174266663 |
[109,85] |
[31,139,37] |
-6 |
hSpCas9 |
negative selection |
5267322 |
19950984 |
19951006 |
3 |
- |
27760321 |
HT29 |
viability after 10 days |
AGGCTTGATTTGCCAACAGCGG |
RAB5A |
ENSG00000144566 |
-0.5117268903414771 |
[392,306] |
[347,317,254] |
-6 |
hSpCas9 |
negative selection |
5350781 |
19951038 |
19951060 |
3 |
+ |
27760321 |
HT29 |
viability after 10 days |
AATTTCAAGAGAGTACCATTGG |
RAB5A |
ENSG00000144566 |
1.3844732219886087 |
[29,23] |
[22,208,36] |
9 |
hSpCas9 |
negative selection |
5350782 |
19975683 |
19975705 |
3 |
- |
27760321 |
HT29 |
viability after 10 days |
GTACATTGGTGCTAGGCTATGG |
RAB5A |
ENSG00000144566 |
0.19069618246698145 |
[511,399] |
[682,686,581] |
2 |
hSpCas9 |
negative selection |
5350783 |
19975724 |
19975746 |
3 |
- |
27760321 |
HT29 |
viability after 10 days |
GTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
0.08153868772374828 |
[0,0] |
[0,0,1] |
1 |
hSpCas9 |
negative selection |
5350784 |
19976113 |
19976135 |
3 |
+ |
27760321 |
HT29 |
viability after 10 days |
ATAGCTTTATCGGGAAACAAGG |
RAB5A |
ENSG00000144566 |
-1.3663588308251813 |
[109,85] |
[57,14,67] |
-8 |
hSpCas9 |
negative selection |
5350785 |
19950984 |
19951006 |
3 |
- |
27760321 |
MOLM13 |
viability |
AGGCTTGATTTGCCAACAGCGG |
RAB5A |
ENSG00000144566 |
-0.9343214177778913 |
[441,392] |
[148,100] |
-5 |
hSpCas9 |
negative selection |
5434244 |
19951038 |
19951060 |
3 |
+ |
27760321 |
MOLM13 |
viability |
AATTTCAAGAGAGTACCATTGG |
RAB5A |
ENSG00000144566 |
-4.4711071265022095 |
[49,29] |
[0,0] |
-9 |
hSpCas9 |
negative selection |
5434245 |
19975683 |
19975705 |
3 |
- |
27760321 |
MOLM13 |
viability |
GTACATTGGTGCTAGGCTATGG |
RAB5A |
ENSG00000144566 |
0.02670944401002895 |
[579,511] |
[336,292] |
0 |
hSpCas9 |
negative selection |
5434246 |
19975724 |
19975746 |
3 |
- |
27760321 |
MOLM13 |
viability |
GTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
-0.4283021087726899 |
[3,0] |
[0,0] |
-3 |
hSpCas9 |
negative selection |
5434247 |
19976113 |
19976135 |
3 |
+ |
27760321 |
MOLM13 |
viability |
ATAGCTTTATCGGGAAACAAGG |
RAB5A |
ENSG00000144566 |
-1.8170239981258298 |
[110,109] |
[0,31] |
-7 |
hSpCas9 |
negative selection |
5434248 |
19947138 |
19947161 |
3 |
+ |
27661255 |
K562 |
viability |
GGCAGCGGAAGTGGCTCCGGCGG |
RAB5A |
ENSG00000144566 |
0.14060789630193776 |
[665,845] |
[799,545] |
5 |
dCas9-KRAB |
negative selection |
5505858 |
19947326 |
19947349 |
3 |
+ |
27661255 |
K562 |
viability |
GCGGAGACGGAGCCCGACAGGGG |
RAB5A |
ENSG00000144566 |
0.07759481014313263 |
[1019,1092] |
[950,836] |
2 |
dCas9-KRAB |
negative selection |
5505859 |
19947329 |
19947352 |
3 |
+ |
27661255 |
K562 |
viability |
GAGACGGAGCCCGACAGGGGCGG |
RAB5A |
ENSG00000144566 |
0.06664461912367933 |
[636,636] |
[601,473] |
2 |
dCas9-KRAB |
negative selection |
5505860 |
19947338 |
19947361 |
3 |
- |
27661255 |
K562 |
viability |
GCCGTGGTGCCGCCCCTGTCGGG |
RAB5A |
ENSG00000144566 |
0.41621890913110926 |
[169,311] |
[278,232] |
9 |
dCas9-KRAB |
negative selection |
5505861 |
19975724 |
19975747 |
3 |
- |
27260156 |
BXPC3 |
viability |
TGTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
-0.012333562775908274 |
[408] |
[504,351,390,441] |
0 |
hSpCas9 |
negative selection |
5566053 |
19975614 |
19975637 |
3 |
- |
27260156 |
BXPC3 |
viability |
TGTCATCAAGACATACAGTTTGG |
RAB5A |
ENSG00000144566 |
-0.25400129446456443 |
[827] |
[759,575,654,937] |
-5 |
hSpCas9 |
negative selection |
5630310 |
19976101 |
19976124 |
3 |
- |
27260156 |
BXPC3 |
viability |
GATAAAGCTATTACAATGTTAGG |
RAB5A |
ENSG00000144566 |
-0.04576619350726141 |
[861] |
[727,913,935,929] |
-1 |
hSpCas9 |
negative selection |
5630311 |
19978330 |
19978353 |
3 |
+ |
27260156 |
BXPC3 |
viability |
TGACAATAGTTTATTATTCATGG |
RAB5A |
ENSG00000144566 |
0.1079968554496964 |
[890] |
[753,919,1171,1225] |
2 |
hSpCas9 |
negative selection |
5630312 |
19975724 |
19975747 |
3 |
- |
27260156 |
A673 |
viability |
TGTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
-0.22450485881171367 |
[408] |
[469,361,399,457] |
-5 |
hSpCas9 |
negative selection |
5687304 |
19975614 |
19975637 |
3 |
- |
27260156 |
A673 |
viability |
TGTCATCAAGACATACAGTTTGG |
RAB5A |
ENSG00000144566 |
-0.3551711966221865 |
[827] |
[776,664,879,787] |
-7 |
hSpCas9 |
negative selection |
5751561 |
19976101 |
19976124 |
3 |
- |
27260156 |
A673 |
viability |
GATAAAGCTATTACAATGTTAGG |
RAB5A |
ENSG00000144566 |
-0.048944093271184985 |
[861] |
[1206,957,863,996] |
-1 |
hSpCas9 |
negative selection |
5751562 |
19978330 |
19978353 |
3 |
+ |
27260156 |
A673 |
viability |
TGACAATAGTTTATTATTCATGG |
RAB5A |
ENSG00000144566 |
-0.06850846932066645 |
[890] |
[976,1087,1007,997] |
-2 |
hSpCas9 |
negative selection |
5751563 |
19975724 |
19975747 |
3 |
- |
27260156 |
A375 |
viability |
TGTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
0.03750630516813394 |
[408] |
[513,456,476,504] |
0 |
hSpCas9 |
negative selection |
5808555 |
19975614 |
19975637 |
3 |
- |
27260156 |
A375 |
viability |
TGTCATCAAGACATACAGTTTGG |
RAB5A |
ENSG00000144566 |
-0.13090435439497172 |
[827] |
[832,970,851,884] |
-2 |
hSpCas9 |
negative selection |
5872812 |
19976101 |
19976124 |
3 |
- |
27260156 |
A375 |
viability |
GATAAAGCTATTACAATGTTAGG |
RAB5A |
ENSG00000144566 |
0.2572138041703249 |
[861] |
[1047,1538,1478,832] |
4 |
hSpCas9 |
negative selection |
5872813 |
19978330 |
19978353 |
3 |
+ |
27260156 |
A375 |
viability |
TGACAATAGTTTATTATTCATGG |
RAB5A |
ENSG00000144566 |
0.3573457789826686 |
[890] |
[1553,1178,1419,1173] |
5 |
hSpCas9 |
negative selection |
5872814 |
19975724 |
19975747 |
3 |
- |
27260156 |
COLO741 |
viability |
TGTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
0.033466934475479826 |
[408] |
[532,685,394] |
0 |
hSpCas9 |
negative selection |
5929806 |
19975614 |
19975637 |
3 |
- |
27260156 |
COLO741 |
viability |
TGTCATCAAGACATACAGTTTGG |
RAB5A |
ENSG00000144566 |
-0.7233574166535686 |
[827] |
[679,670,577] |
-9 |
hSpCas9 |
negative selection |
5994063 |
19976101 |
19976124 |
3 |
- |
27260156 |
COLO741 |
viability |
GATAAAGCTATTACAATGTTAGG |
RAB5A |
ENSG00000144566 |
-0.09771121106598779 |
[861] |
[1280,1014,825] |
-2 |
hSpCas9 |
negative selection |
5994064 |
19978330 |
19978353 |
3 |
+ |
27260156 |
COLO741 |
viability |
TGACAATAGTTTATTATTCATGG |
RAB5A |
ENSG00000144566 |
-0.0875637686579619 |
[890] |
[1019,1066,1116] |
-2 |
hSpCas9 |
negative selection |
5994065 |
19975724 |
19975747 |
3 |
- |
27260156 |
CAL120 |
viability |
TGTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
0.2701825373448498 |
[408] |
[522,666,636] |
4 |
hSpCas9 |
negative selection |
6051057 |
19975614 |
19975637 |
3 |
- |
27260156 |
CAL120 |
viability |
TGTCATCAAGACATACAGTTTGG |
RAB5A |
ENSG00000144566 |
0.033128601479225916 |
[827] |
[1411,1015,792] |
0 |
hSpCas9 |
negative selection |
6115314 |
19976101 |
19976124 |
3 |
- |
27260156 |
CAL120 |
viability |
GATAAAGCTATTACAATGTTAGG |
RAB5A |
ENSG00000144566 |
-0.16432284411949027 |
[861] |
[1135,912,850] |
-2 |
hSpCas9 |
negative selection |
6115315 |
19978330 |
19978353 |
3 |
+ |
27260156 |
CAL120 |
viability |
TGACAATAGTTTATTATTCATGG |
RAB5A |
ENSG00000144566 |
0.01902695617517658 |
[890] |
[1110,1185,1071] |
0 |
hSpCas9 |
negative selection |
6115316 |
19975724 |
19975747 |
3 |
- |
27260156 |
CADOES1 |
viability |
TGTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
-0.12329767421518611 |
[408] |
[348,403,270,373] |
-2 |
hSpCas9 |
negative selection |
6172308 |
19975614 |
19975637 |
3 |
- |
27260156 |
CADOES1 |
viability |
TGTCATCAAGACATACAGTTTGG |
RAB5A |
ENSG00000144566 |
0.04832305060697972 |
[827] |
[988,777,666,748] |
0 |
hSpCas9 |
negative selection |
6236565 |
19976101 |
19976124 |
3 |
- |
27260156 |
CADOES1 |
viability |
GATAAAGCTATTACAATGTTAGG |
RAB5A |
ENSG00000144566 |
-0.24001420034422316 |
[861] |
[714,549,642,811] |
-4 |
hSpCas9 |
negative selection |
6236566 |
19978330 |
19978353 |
3 |
+ |
27260156 |
CADOES1 |
viability |
TGACAATAGTTTATTATTCATGG |
RAB5A |
ENSG00000144566 |
0.2837134174488529 |
[890] |
[842,889,1043,1267] |
5 |
hSpCas9 |
negative selection |
6236567 |
19975724 |
19975747 |
3 |
- |
27260156 |
EWS502 |
viability |
TGTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
-0.1112020332603641 |
[408] |
[376,355,417,460] |
-2 |
hSpCas9 |
negative selection |
6293559 |
19975614 |
19975637 |
3 |
- |
27260156 |
EWS502 |
viability |
TGTCATCAAGACATACAGTTTGG |
RAB5A |
ENSG00000144566 |
-0.15912609340471773 |
[827] |
[767,831,838,693] |
-3 |
hSpCas9 |
negative selection |
6357816 |
19976101 |
19976124 |
3 |
- |
27260156 |
EWS502 |
viability |
GATAAAGCTATTACAATGTTAGG |
RAB5A |
ENSG00000144566 |
0.040117107396165363 |
[861] |
[777,976,936,1087] |
0 |
hSpCas9 |
negative selection |
6357817 |
19978330 |
19978353 |
3 |
+ |
27260156 |
EWS502 |
viability |
TGACAATAGTTTATTATTCATGG |
RAB5A |
ENSG00000144566 |
0.3237922672198579 |
[890] |
[989,1377,1047,1327] |
5 |
hSpCas9 |
negative selection |
6357818 |
19975724 |
19975747 |
3 |
- |
27260156 |
EW8 |
viability |
TGTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
0.05659531490776884 |
[408] |
[330,329,339,375] |
1 |
hSpCas9 |
negative selection |
6414810 |
19975614 |
19975637 |
3 |
- |
27260156 |
EW8 |
viability |
TGTCATCAAGACATACAGTTTGG |
RAB5A |
ENSG00000144566 |
-0.06493285673984772 |
[827] |
[594,564,708,677] |
-1 |
hSpCas9 |
negative selection |
6479067 |
19976101 |
19976124 |
3 |
- |
27260156 |
EW8 |
viability |
GATAAAGCTATTACAATGTTAGG |
RAB5A |
ENSG00000144566 |
-0.008695736147341981 |
[861] |
[910,649,685,553] |
0 |
hSpCas9 |
negative selection |
6479068 |
19978330 |
19978353 |
3 |
+ |
27260156 |
EW8 |
viability |
TGACAATAGTTTATTATTCATGG |
RAB5A |
ENSG00000144566 |
0.11172927814978029 |
[890] |
[1065,747,645,712] |
2 |
hSpCas9 |
negative selection |
6479069 |
19975724 |
19975747 |
3 |
- |
27260156 |
CORL105 |
viability |
TGTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
-0.08148531054744274 |
[408] |
[439,398,625,372] |
-1 |
hSpCas9 |
negative selection |
6536061 |
19975614 |
19975637 |
3 |
- |
27260156 |
CORL105 |
viability |
TGTCATCAAGACATACAGTTTGG |
RAB5A |
ENSG00000144566 |
-0.16275802610890422 |
[827] |
[689,983,979,818] |
-3 |
hSpCas9 |
negative selection |
6600318 |
19976101 |
19976124 |
3 |
- |
27260156 |
CORL105 |
viability |
GATAAAGCTATTACAATGTTAGG |
RAB5A |
ENSG00000144566 |
0.1732416743137135 |
[861] |
[914,1150,1541,998] |
3 |
hSpCas9 |
negative selection |
6600319 |
19978330 |
19978353 |
3 |
+ |
27260156 |
CORL105 |
viability |
TGACAATAGTTTATTATTCATGG |
RAB5A |
ENSG00000144566 |
0.023917512300150823 |
[890] |
[1050,994,1070,1126] |
0 |
hSpCas9 |
negative selection |
6600320 |
19975724 |
19975747 |
3 |
- |
27260156 |
HS294T |
viability |
TGTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
-0.49134579209563883 |
[408] |
[90,110,135,113] |
-6 |
hSpCas9 |
negative selection |
6657312 |
19975614 |
19975637 |
3 |
- |
27260156 |
HS294T |
viability |
TGTCATCAAGACATACAGTTTGG |
RAB5A |
ENSG00000144566 |
-0.1740666748973264 |
[827] |
[173,215,308,480] |
-2 |
hSpCas9 |
negative selection |
6721569 |
19976101 |
19976124 |
3 |
- |
27260156 |
HS294T |
viability |
GATAAAGCTATTACAATGTTAGG |
RAB5A |
ENSG00000144566 |
-0.15686604262641457 |
[861] |
[282,246,349,321] |
-2 |
hSpCas9 |
negative selection |
6721570 |
19978330 |
19978353 |
3 |
+ |
27260156 |
HS294T |
viability |
TGACAATAGTTTATTATTCATGG |
RAB5A |
ENSG00000144566 |
-0.09837636849167652 |
[890] |
[252,331,282,444] |
-1 |
hSpCas9 |
negative selection |
6721571 |
19975724 |
19975747 |
3 |
- |
27260156 |
HCC44 |
viability |
TGTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
0.21792934500490832 |
[408] |
[420,878,409,361] |
3 |
hSpCas9 |
negative selection |
6778563 |
19975614 |
19975637 |
3 |
- |
27260156 |
HCC44 |
viability |
TGTCATCAAGACATACAGTTTGG |
RAB5A |
ENSG00000144566 |
-0.3571117215804458 |
[827] |
[733,811,1039,385] |
-5 |
hSpCas9 |
negative selection |
6842820 |
19976101 |
19976124 |
3 |
- |
27260156 |
HCC44 |
viability |
GATAAAGCTATTACAATGTTAGG |
RAB5A |
ENSG00000144566 |
0.19763360912374894 |
[861] |
[1095,1066,1057,1232] |
3 |
hSpCas9 |
negative selection |
6842821 |
19978330 |
19978353 |
3 |
+ |
27260156 |
HCC44 |
viability |
TGACAATAGTTTATTATTCATGG |
RAB5A |
ENSG00000144566 |
-0.010448623076608987 |
[890] |
[1093,716,1220,1046] |
0 |
hSpCas9 |
negative selection |
6842822 |
19975724 |
19975747 |
3 |
- |
27260156 |
G402 |
viability |
TGTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
-0.08949625167618025 |
[408] |
[815,362,369,373] |
-1 |
hSpCas9 |
negative selection |
6899814 |
19975614 |
19975637 |
3 |
- |
27260156 |
G402 |
viability |
TGTCATCAAGACATACAGTTTGG |
RAB5A |
ENSG00000144566 |
-0.3251139269356072 |
[827] |
[1217,726,767,575] |
-4 |
hSpCas9 |
negative selection |
6964071 |
19976101 |
19976124 |
3 |
- |
27260156 |
G402 |
viability |
GATAAAGCTATTACAATGTTAGG |
RAB5A |
ENSG00000144566 |
0.26882846415503003 |
[861] |
[1005,1485,1150,1389] |
3 |
hSpCas9 |
negative selection |
6964072 |
19978330 |
19978353 |
3 |
+ |
27260156 |
G402 |
viability |
TGACAATAGTTTATTATTCATGG |
RAB5A |
ENSG00000144566 |
0.4411485711214427 |
[890] |
[1827,1197,1362,1540] |
5 |
hSpCas9 |
negative selection |
6964073 |
19975724 |
19975747 |
3 |
- |
27260156 |
L33 |
viability |
TGTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
-0.4816891708253655 |
[408] |
[298,122,170,299] |
-8 |
hSpCas9 |
negative selection |
7021065 |
19975614 |
19975637 |
3 |
- |
27260156 |
L33 |
viability |
TGTCATCAAGACATACAGTTTGG |
RAB5A |
ENSG00000144566 |
-0.45955388361263405 |
[827] |
[478,267,462,542] |
-8 |
hSpCas9 |
negative selection |
7085322 |
19976101 |
19976124 |
3 |
- |
27260156 |
L33 |
viability |
GATAAAGCTATTACAATGTTAGG |
RAB5A |
ENSG00000144566 |
-0.034926698876621476 |
[861] |
[1097,295,497,746] |
-1 |
hSpCas9 |
negative selection |
7085323 |
19978330 |
19978353 |
3 |
+ |
27260156 |
L33 |
viability |
TGACAATAGTTTATTATTCATGG |
RAB5A |
ENSG00000144566 |
-0.04922803369980544 |
[890] |
[839,351,552,865] |
-1 |
hSpCas9 |
negative selection |
7085324 |
19975724 |
19975747 |
3 |
- |
27260156 |
K562 |
viability |
TGTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
-1.0479315920455596 |
[408] |
[308,179,164,70] |
-8 |
hSpCas9 |
negative selection |
7142316 |
19975614 |
19975637 |
3 |
- |
27260156 |
K562 |
viability |
TGTCATCAAGACATACAGTTTGG |
RAB5A |
ENSG00000144566 |
-0.02182399780844546 |
[827] |
[697,809,762,633] |
0 |
hSpCas9 |
negative selection |
7206573 |
19976101 |
19976124 |
3 |
- |
27260156 |
K562 |
viability |
GATAAAGCTATTACAATGTTAGG |
RAB5A |
ENSG00000144566 |
0.13863647307613403 |
[861] |
[670,946,1269,507] |
1 |
hSpCas9 |
negative selection |
7206574 |
19978330 |
19978353 |
3 |
+ |
27260156 |
K562 |
viability |
TGACAATAGTTTATTATTCATGG |
RAB5A |
ENSG00000144566 |
0.00887961450750896 |
[890] |
[965,754,770,708] |
0 |
hSpCas9 |
negative selection |
7206575 |
19975724 |
19975747 |
3 |
- |
27260156 |
HT29 |
viability |
TGTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
-0.03182339359527414 |
[408] |
[548,562,406,439] |
0 |
hSpCas9 |
negative selection |
7263567 |
19975614 |
19975637 |
3 |
- |
27260156 |
HT29 |
viability |
TGTCATCAAGACATACAGTTTGG |
RAB5A |
ENSG00000144566 |
-0.20002964207742002 |
[827] |
[869,941,773,912] |
-4 |
hSpCas9 |
negative selection |
7327824 |
19976101 |
19976124 |
3 |
- |
27260156 |
HT29 |
viability |
GATAAAGCTATTACAATGTTAGG |
RAB5A |
ENSG00000144566 |
0.06022862940826845 |
[861] |
[1078,1223,1134,951] |
1 |
hSpCas9 |
negative selection |
7327825 |
19978330 |
19978353 |
3 |
+ |
27260156 |
HT29 |
viability |
TGACAATAGTTTATTATTCATGG |
RAB5A |
ENSG00000144566 |
0.2276727812382846 |
[890] |
[1386,1369,1274,1073] |
4 |
hSpCas9 |
negative selection |
7327826 |
19975724 |
19975747 |
3 |
- |
27260156 |
MHHES1 |
viability |
TGTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
0.09575482791536138 |
[408] |
[566,605,549,300] |
1 |
hSpCas9 |
negative selection |
7384818 |
19975614 |
19975637 |
3 |
- |
27260156 |
MHHES1 |
viability |
TGTCATCAAGACATACAGTTTGG |
RAB5A |
ENSG00000144566 |
-0.22216191117722794 |
[827] |
[1357,796,672,490] |
-4 |
hSpCas9 |
negative selection |
7449075 |
19976101 |
19976124 |
3 |
- |
27260156 |
MHHES1 |
viability |
GATAAAGCTATTACAATGTTAGG |
RAB5A |
ENSG00000144566 |
0.2576109209918085 |
[861] |
[1217,1642,1076,814] |
5 |
hSpCas9 |
negative selection |
7449076 |
19978330 |
19978353 |
3 |
+ |
27260156 |
MHHES1 |
viability |
TGACAATAGTTTATTATTCATGG |
RAB5A |
ENSG00000144566 |
0.5913008271199445 |
[890] |
[1923,1325,1817,1079] |
8 |
hSpCas9 |
negative selection |
7449077 |
19975724 |
19975747 |
3 |
- |
27260156 |
MEWO |
viability |
TGTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
0.18027358913361263 |
[408] |
[556,338,428] |
4 |
hSpCas9 |
negative selection |
7506069 |
19975614 |
19975637 |
3 |
- |
27260156 |
MEWO |
viability |
TGTCATCAAGACATACAGTTTGG |
RAB5A |
ENSG00000144566 |
-0.6083560592703987 |
[827] |
[620,533,390] |
-8 |
hSpCas9 |
negative selection |
7570326 |
19976101 |
19976124 |
3 |
- |
27260156 |
MEWO |
viability |
GATAAAGCTATTACAATGTTAGG |
RAB5A |
ENSG00000144566 |
-0.05989554368169148 |
[861] |
[1069,612,695] |
-1 |
hSpCas9 |
negative selection |
7570327 |
19978330 |
19978353 |
3 |
+ |
27260156 |
MEWO |
viability |
TGACAATAGTTTATTATTCATGG |
RAB5A |
ENSG00000144566 |
0.12182835949216986 |
[890] |
[1082,905,765] |
2 |
hSpCas9 |
negative selection |
7570328 |
19975724 |
19975747 |
3 |
- |
27260156 |
LNCAPCLONEFGC |
viability |
TGTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
0.18098395924875618 |
[408] |
[440,349,628,294] |
3 |
hSpCas9 |
negative selection |
7627320 |
19975614 |
19975637 |
3 |
- |
27260156 |
LNCAPCLONEFGC |
viability |
TGTCATCAAGACATACAGTTTGG |
RAB5A |
ENSG00000144566 |
-0.2173895316367569 |
[827] |
[630,644,736,580] |
-3 |
hSpCas9 |
negative selection |
7691577 |
19976101 |
19976124 |
3 |
- |
27260156 |
LNCAPCLONEFGC |
viability |
GATAAAGCTATTACAATGTTAGG |
RAB5A |
ENSG00000144566 |
0.00048787578168341117 |
[861] |
[640,910,982,612] |
0 |
hSpCas9 |
negative selection |
7691578 |
19978330 |
19978353 |
3 |
+ |
27260156 |
LNCAPCLONEFGC |
viability |
TGACAATAGTTTATTATTCATGG |
RAB5A |
ENSG00000144566 |
0.17092492094395362 |
[890] |
[1069,698,1065,832] |
2 |
hSpCas9 |
negative selection |
7691579 |
19975724 |
19975747 |
3 |
- |
27260156 |
PANC0327 |
viability |
TGTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
0.16278119427719984 |
[408] |
[410,331,543,349] |
2 |
hSpCas9 |
negative selection |
7748571 |
19975614 |
19975637 |
3 |
- |
27260156 |
PANC0327 |
viability |
TGTCATCAAGACATACAGTTTGG |
RAB5A |
ENSG00000144566 |
0.03836932043685648 |
[827] |
[755,637,645,995] |
0 |
hSpCas9 |
negative selection |
7812828 |
19976101 |
19976124 |
3 |
- |
27260156 |
PANC0327 |
viability |
GATAAAGCTATTACAATGTTAGG |
RAB5A |
ENSG00000144566 |
0.17450514234259962 |
[861] |
[692,659,649,1464] |
2 |
hSpCas9 |
negative selection |
7812829 |
19978330 |
19978353 |
3 |
+ |
27260156 |
PANC0327 |
viability |
TGACAATAGTTTATTATTCATGG |
RAB5A |
ENSG00000144566 |
0.30498068329204964 |
[890] |
[1158,964,760,1041] |
4 |
hSpCas9 |
negative selection |
7812830 |
19975724 |
19975747 |
3 |
- |
27260156 |
NCIH2009 |
viability |
TGTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
-0.41707500635468725 |
[408] |
[571,243,498] |
-5 |
hSpCas9 |
negative selection |
7869822 |
19975614 |
19975637 |
3 |
- |
27260156 |
NCIH2009 |
viability |
TGTCATCAAGACATACAGTTTGG |
RAB5A |
ENSG00000144566 |
-0.5756642196306626 |
[827] |
[915,663,776] |
-6 |
hSpCas9 |
negative selection |
7934079 |
19976101 |
19976124 |
3 |
- |
27260156 |
NCIH2009 |
viability |
GATAAAGCTATTACAATGTTAGG |
RAB5A |
ENSG00000144566 |
0.15367384842791898 |
[861] |
[1424,773,1844] |
2 |
hSpCas9 |
negative selection |
7934080 |
19978330 |
19978353 |
3 |
+ |
27260156 |
NCIH2009 |
viability |
TGACAATAGTTTATTATTCATGG |
RAB5A |
ENSG00000144566 |
0.19591607334880723 |
[890] |
[1627,1057,1635] |
2 |
hSpCas9 |
negative selection |
7934081 |
19975724 |
19975747 |
3 |
- |
27260156 |
NCIH1373 |
viability |
TGTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
-0.541308877561429 |
[408] |
[218,220,465,90] |
-5 |
hSpCas9 |
negative selection |
7991073 |
19975614 |
19975637 |
3 |
- |
27260156 |
NCIH1373 |
viability |
TGTCATCAAGACATACAGTTTGG |
RAB5A |
ENSG00000144566 |
-0.2121854127919377 |
[827] |
[1442,667,398,213] |
-2 |
hSpCas9 |
negative selection |
8055330 |
19976101 |
19976124 |
3 |
- |
27260156 |
NCIH1373 |
viability |
GATAAAGCTATTACAATGTTAGG |
RAB5A |
ENSG00000144566 |
0.26642067436531236 |
[861] |
[738,1597,679,405] |
2 |
hSpCas9 |
negative selection |
8055331 |
19978330 |
19978353 |
3 |
+ |
27260156 |
NCIH1373 |
viability |
TGACAATAGTTTATTATTCATGG |
RAB5A |
ENSG00000144566 |
0.20621624517958526 |
[890] |
[1315,1162,1242,232] |
2 |
hSpCas9 |
negative selection |
8055332 |
19975724 |
19975747 |
3 |
- |
27260156 |
PATU8902 |
viability |
TGTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
0.05388990016723466 |
[408] |
[682,674,467,561] |
0 |
hSpCas9 |
negative selection |
8112324 |
19975614 |
19975637 |
3 |
- |
27260156 |
PATU8902 |
viability |
TGTCATCAAGACATACAGTTTGG |
RAB5A |
ENSG00000144566 |
0.5507850831092294 |
[827] |
[1494,1390,2257,1420] |
6 |
hSpCas9 |
negative selection |
8176581 |
19976101 |
19976124 |
3 |
- |
27260156 |
PATU8902 |
viability |
GATAAAGCTATTACAATGTTAGG |
RAB5A |
ENSG00000144566 |
0.5837087733716579 |
[861] |
[1795,1257,1769,2440] |
6 |
hSpCas9 |
negative selection |
8176582 |
19978330 |
19978353 |
3 |
+ |
27260156 |
PATU8902 |
viability |
TGACAATAGTTTATTATTCATGG |
RAB5A |
ENSG00000144566 |
0.6052572221305355 |
[890] |
[2311,2249,1292,1822] |
6 |
hSpCas9 |
negative selection |
8176583 |
19975724 |
19975747 |
3 |
- |
27260156 |
PANC1 |
viability |
TGTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
-0.34279818627984476 |
[408] |
[202,449,249,242] |
-5 |
hSpCas9 |
negative selection |
8233575 |
19975614 |
19975637 |
3 |
- |
27260156 |
PANC1 |
viability |
TGTCATCAAGACATACAGTTTGG |
RAB5A |
ENSG00000144566 |
0.039189008631970834 |
[827] |
[647,860,903,556] |
0 |
hSpCas9 |
negative selection |
8297832 |
19976101 |
19976124 |
3 |
- |
27260156 |
PANC1 |
viability |
GATAAAGCTATTACAATGTTAGG |
RAB5A |
ENSG00000144566 |
0.0616690765582284 |
[861] |
[580,835,812,851] |
0 |
hSpCas9 |
negative selection |
8297833 |
19978330 |
19978353 |
3 |
+ |
27260156 |
PANC1 |
viability |
TGACAATAGTTTATTATTCATGG |
RAB5A |
ENSG00000144566 |
0.20978821698803296 |
[890] |
[868,1104,819,791] |
3 |
hSpCas9 |
negative selection |
8297834 |
19975724 |
19975747 |
3 |
- |
27260156 |
PANC0813 |
viability |
TGTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
-0.3187633119310776 |
[408] |
[277,296,413,532] |
-5 |
hSpCas9 |
negative selection |
8354826 |
19975614 |
19975637 |
3 |
- |
27260156 |
PANC0813 |
viability |
TGTCATCAAGACATACAGTTTGG |
RAB5A |
ENSG00000144566 |
-0.42465064432904726 |
[827] |
[734,859,776,536] |
-6 |
hSpCas9 |
negative selection |
8419083 |
19976101 |
19976124 |
3 |
- |
27260156 |
PANC0813 |
viability |
GATAAAGCTATTACAATGTTAGG |
RAB5A |
ENSG00000144566 |
-0.0780962947800441 |
[861] |
[755,987,1077,992] |
-1 |
hSpCas9 |
negative selection |
8419084 |
19978330 |
19978353 |
3 |
+ |
27260156 |
PANC0813 |
viability |
TGACAATAGTTTATTATTCATGG |
RAB5A |
ENSG00000144566 |
0.10167226481873959 |
[890] |
[1410,1104,847,1149] |
1 |
hSpCas9 |
negative selection |
8419085 |
19975724 |
19975747 |
3 |
- |
27260156 |
RDES |
viability |
TGTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
-0.1735047622076062 |
[408] |
[366,442,323,544] |
-3 |
hSpCas9 |
negative selection |
8476077 |
19975614 |
19975637 |
3 |
- |
27260156 |
RDES |
viability |
TGTCATCAAGACATACAGTTTGG |
RAB5A |
ENSG00000144566 |
-0.17787921054376654 |
[827] |
[613,756,1056,1005] |
-3 |
hSpCas9 |
negative selection |
8540334 |
19976101 |
19976124 |
3 |
- |
27260156 |
RDES |
viability |
GATAAAGCTATTACAATGTTAGG |
RAB5A |
ENSG00000144566 |
0.04602461083508047 |
[861] |
[800,909,1212,1238] |
0 |
hSpCas9 |
negative selection |
8540335 |
19978330 |
19978353 |
3 |
+ |
27260156 |
RDES |
viability |
TGACAATAGTTTATTATTCATGG |
RAB5A |
ENSG00000144566 |
0.28885294636740677 |
[890] |
[952,1184,1383,1573] |
4 |
hSpCas9 |
negative selection |
8540336 |
19975724 |
19975747 |
3 |
- |
27260156 |
PC3 |
viability |
TGTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
-0.1675497980644533 |
[408] |
[256,276,562,448] |
-4 |
hSpCas9 |
negative selection |
8597328 |
19975614 |
19975637 |
3 |
- |
27260156 |
PC3 |
viability |
TGTCATCAAGACATACAGTTTGG |
RAB5A |
ENSG00000144566 |
-0.4499317816178183 |
[827] |
[351,561,1018,707] |
-8 |
hSpCas9 |
negative selection |
8661585 |
19976101 |
19976124 |
3 |
- |
27260156 |
PC3 |
viability |
GATAAAGCTATTACAATGTTAGG |
RAB5A |
ENSG00000144566 |
-0.2449841123233475 |
[861] |
[461,821,984,770] |
-5 |
hSpCas9 |
negative selection |
8661586 |
19978330 |
19978353 |
3 |
+ |
27260156 |
PC3 |
viability |
TGACAATAGTTTATTATTCATGG |
RAB5A |
ENSG00000144566 |
0.05329950005938344 |
[890] |
[478,908,1592,1092] |
1 |
hSpCas9 |
negative selection |
8661587 |
19975724 |
19975747 |
3 |
- |
27260156 |
PATU8988T |
viability |
TGTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
0.045624039170128 |
[408] |
[503,420,186,533] |
0 |
hSpCas9 |
negative selection |
8718579 |
19975614 |
19975637 |
3 |
- |
27260156 |
PATU8988T |
viability |
TGTCATCAAGACATACAGTTTGG |
RAB5A |
ENSG00000144566 |
-0.7090313627302411 |
[827] |
[434,494,552,472] |
-8 |
hSpCas9 |
negative selection |
8782836 |
19976101 |
19976124 |
3 |
- |
27260156 |
PATU8988T |
viability |
GATAAAGCTATTACAATGTTAGG |
RAB5A |
ENSG00000144566 |
0.06433428057903157 |
[861] |
[815,1255,635,809] |
1 |
hSpCas9 |
negative selection |
8782837 |
19978330 |
19978353 |
3 |
+ |
27260156 |
PATU8988T |
viability |
TGACAATAGTTTATTATTCATGG |
RAB5A |
ENSG00000144566 |
-0.11650445587038438 |
[890] |
[727,1184,334,986] |
-2 |
hSpCas9 |
negative selection |
8782838 |
19975724 |
19975747 |
3 |
- |
27260156 |
T47D |
viability |
TGTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
-0.013687598896042985 |
[408] |
[405,509,389,582] |
0 |
hSpCas9 |
negative selection |
8839830 |
19975614 |
19975637 |
3 |
- |
27260156 |
T47D |
viability |
TGTCATCAAGACATACAGTTTGG |
RAB5A |
ENSG00000144566 |
-0.2195352455815287 |
[827] |
[786,851,762,912] |
-5 |
hSpCas9 |
negative selection |
8904087 |
19976101 |
19976124 |
3 |
- |
27260156 |
T47D |
viability |
GATAAAGCTATTACAATGTTAGG |
RAB5A |
ENSG00000144566 |
0.02881251514522365 |
[861] |
[1062,977,925,1139] |
0 |
hSpCas9 |
negative selection |
8904088 |
19978330 |
19978353 |
3 |
+ |
27260156 |
T47D |
viability |
TGACAATAGTTTATTATTCATGG |
RAB5A |
ENSG00000144566 |
0.20024265993113688 |
[890] |
[1250,1094,1275,1153] |
4 |
hSpCas9 |
negative selection |
8904089 |
19975724 |
19975747 |
3 |
- |
27260156 |
SU8686 |
viability |
TGTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
0.07227558850065832 |
[408] |
[382,325,456,579] |
1 |
hSpCas9 |
negative selection |
8961081 |
19975614 |
19975637 |
3 |
- |
27260156 |
SU8686 |
viability |
TGTCATCAAGACATACAGTTTGG |
RAB5A |
ENSG00000144566 |
-0.35622992133556397 |
[827] |
[578,718,608,650] |
-5 |
hSpCas9 |
negative selection |
9025338 |
19976101 |
19976124 |
3 |
- |
27260156 |
SU8686 |
viability |
GATAAAGCTATTACAATGTTAGG |
RAB5A |
ENSG00000144566 |
0.10988859625971525 |
[861] |
[816,706,989,1265] |
1 |
hSpCas9 |
negative selection |
9025339 |
19978330 |
19978353 |
3 |
+ |
27260156 |
SU8686 |
viability |
TGACAATAGTTTATTATTCATGG |
RAB5A |
ENSG00000144566 |
0.2720286282639659 |
[890] |
[1094,846,1231,1123] |
4 |
hSpCas9 |
negative selection |
9025340 |
19975724 |
19975747 |
3 |
- |
27260156 |
SKES1 |
viability |
TGTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
0.047317736459943915 |
[408] |
[363,543,427,359] |
1 |
hSpCas9 |
negative selection |
9082332 |
19975614 |
19975637 |
3 |
- |
27260156 |
SKES1 |
viability |
TGTCATCAAGACATACAGTTTGG |
RAB5A |
ENSG00000144566 |
-0.281632524918462 |
[827] |
[805,710,558,659] |
-6 |
hSpCas9 |
negative selection |
9146589 |
19976101 |
19976124 |
3 |
- |
27260156 |
SKES1 |
viability |
GATAAAGCTATTACAATGTTAGG |
RAB5A |
ENSG00000144566 |
-0.11196310774493956 |
[861] |
[1093,652,810,656] |
-2 |
hSpCas9 |
negative selection |
9146590 |
19978330 |
19978353 |
3 |
+ |
27260156 |
SKES1 |
viability |
TGACAATAGTTTATTATTCATGG |
RAB5A |
ENSG00000144566 |
-0.012450134087436004 |
[890] |
[960,870,978,730] |
0 |
hSpCas9 |
negative selection |
9146591 |
19975724 |
19975747 |
3 |
- |
27260156 |
TOV112D |
viability |
TGTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
-0.1382557423471149 |
[408] |
[322,463,396,323] |
-3 |
hSpCas9 |
negative selection |
9203583 |
19975614 |
19975637 |
3 |
- |
27260156 |
TOV112D |
viability |
TGTCATCAAGACATACAGTTTGG |
RAB5A |
ENSG00000144566 |
-0.004762748279415585 |
[827] |
[1481,667,597,579] |
0 |
hSpCas9 |
negative selection |
9267840 |
19976101 |
19976124 |
3 |
- |
27260156 |
TOV112D |
viability |
GATAAAGCTATTACAATGTTAGG |
RAB5A |
ENSG00000144566 |
-0.1610289429447438 |
[861] |
[771,1051,878,461] |
-3 |
hSpCas9 |
negative selection |
9267841 |
19978330 |
19978353 |
3 |
+ |
27260156 |
TOV112D |
viability |
TGACAATAGTTTATTATTCATGG |
RAB5A |
ENSG00000144566 |
-0.04323090768432869 |
[890] |
[851,790,822,973] |
-1 |
hSpCas9 |
negative selection |
9267842 |
19975724 |
19975747 |
3 |
- |
27260156 |
TC71 |
viability |
TGTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
-0.055928278598333714 |
[408] |
[428,390,444,420] |
-1 |
hSpCas9 |
negative selection |
9324834 |
19975614 |
19975637 |
3 |
- |
27260156 |
TC71 |
viability |
TGTCATCAAGACATACAGTTTGG |
RAB5A |
ENSG00000144566 |
-0.3219253173005876 |
[827] |
[845,640,754,585] |
-7 |
hSpCas9 |
negative selection |
9389091 |
19976101 |
19976124 |
3 |
- |
27260156 |
TC71 |
viability |
GATAAAGCTATTACAATGTTAGG |
RAB5A |
ENSG00000144566 |
-0.05412124890983361 |
[861] |
[870,742,921,1031] |
-1 |
hSpCas9 |
negative selection |
9389092 |
19978330 |
19978353 |
3 |
+ |
27260156 |
TC71 |
viability |
TGACAATAGTTTATTATTCATGG |
RAB5A |
ENSG00000144566 |
0.0806701948279962 |
[890] |
[902,1074,873,1206] |
2 |
hSpCas9 |
negative selection |
9389093 |
19975724 |
19975747 |
3 |
- |
27260156 |
TC32 |
viability |
TGTGATATCATATACAACTATGG |
RAB5A |
ENSG00000144566 |
-0.12999691318634815 |
[408] |
[450,183,385,423] |
-2 |
hSpCas9 |
negative selection |
9446085 |
19975614 |
19975637 |
3 |
- |
27260156 |
TC32 |
viability |
TGTCATCAAGACATACAGTTTGG |
RAB5A |
ENSG00000144566 |
-0.4074583954364735 |
[827] |
[574,461,729,618] |
-6 |
hSpCas9 |
negative selection |
9510342 |
19976101 |
19976124 |
3 |
- |
27260156 |
TC32 |
viability |
GATAAAGCTATTACAATGTTAGG |
RAB5A |
ENSG00000144566 |
0.19817886276454955 |
[861] |
[730,834,1115,1079] |
3 |
hSpCas9 |
negative selection |
9510343 |
19978330 |
19978353 |
3 |
+ |
27260156 |
TC32 |
viability |
TGACAATAGTTTATTATTCATGG |
RAB5A |
ENSG00000144566 |
0.5328492867270778 |
[890] |
[1384,876,1297,1336] |
8 |
hSpCas9 |
negative selection |
9510344 |
19950908 |
19950931 |
3 |
+ |
27869803 |
HPAFII |
viability after 27 days |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
-0.06035265328588746 |
[367] |
[178,190,NaN] |
0 |
hSpCas9 |
negative selection |
9584264 |
19950909 |
19950932 |
3 |
+ |
27869803 |
HPAFII |
viability after 27 days |
GAGGCGCAACAAGACCCAACGGG |
RAB5A |
ENSG00000144566 |
0.5274546645007878 |
[139] |
[122,91,NaN] |
4 |
hSpCas9 |
negative selection |
9584265 |
19950908 |
19950931 |
3 |
+ |
27869803 |
HPAFII |
viability after 15 days |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
-0.08650805376683945 |
[367] |
[361,378,NaN] |
-1 |
hSpCas9 |
negative selection |
9666713 |
19950909 |
19950932 |
3 |
+ |
27869803 |
HPAFII |
viability after 15 days |
GAGGCGCAACAAGACCCAACGGG |
RAB5A |
ENSG00000144566 |
0.4280801737885431 |
[139] |
[252,170,NaN] |
5 |
hSpCas9 |
negative selection |
9666714 |
19950908 |
19950931 |
3 |
+ |
27869803 |
ASPC1 |
viability after 36 days |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
0.6843841843021666 |
[765] |
[435,669,229] |
6 |
hSpCas9 |
negative selection |
9749162 |
19950909 |
19950932 |
3 |
+ |
27869803 |
ASPC1 |
viability after 36 days |
GAGGCGCAACAAGACCCAACGGG |
RAB5A |
ENSG00000144566 |
1.255435484916988 |
[325] |
[185,258,338] |
9 |
hSpCas9 |
negative selection |
9749163 |
19950908 |
19950931 |
3 |
+ |
27869803 |
PATU8988S |
viability after 35 days |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
0.532506765682976 |
[571] |
[429,235,NaN] |
6 |
hSpCas9 |
negative selection |
9831611 |
19950909 |
19950932 |
3 |
+ |
27869803 |
PATU8988S |
viability after 35 days |
GAGGCGCAACAAGACCCAACGGG |
RAB5A |
ENSG00000144566 |
-1.215020860144216 |
[466] |
[89,71,NaN] |
-8 |
hSpCas9 |
negative selection |
9831612 |
19950908 |
19950931 |
3 |
+ |
27869803 |
PATU8988S |
viability after 31 days |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
0.7023649456458315 |
[571] |
[404,327,NaN] |
7 |
hSpCas9 |
negative selection |
9914060 |
19950909 |
19950932 |
3 |
+ |
27869803 |
PATU8988S |
viability after 31 days |
GAGGCGCAACAAGACCCAACGGG |
RAB5A |
ENSG00000144566 |
-1.7955278656968545 |
[466] |
[61,42,NaN] |
-9 |
hSpCas9 |
negative selection |
9914061 |
19950908 |
19950931 |
3 |
+ |
27869803 |
HPAFII |
viability after 35 days |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
0.07306186869920062 |
[367] |
[147,249,NaN] |
0 |
hSpCas9 |
negative selection |
9996509 |
19950909 |
19950932 |
3 |
+ |
27869803 |
HPAFII |
viability after 35 days |
GAGGCGCAACAAGACCCAACGGG |
RAB5A |
ENSG00000144566 |
0.0532922726911772 |
[139] |
[97,45,NaN] |
0 |
hSpCas9 |
negative selection |
9996510 |
19950908 |
19950931 |
3 |
+ |
27869803 |
HPAFII |
viability after 31 days |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
-0.47302929561754226 |
[367] |
[132,165,NaN] |
-3 |
hSpCas9 |
negative selection |
10078958 |
19950909 |
19950932 |
3 |
+ |
27869803 |
HPAFII |
viability after 31 days |
GAGGCGCAACAAGACCCAACGGG |
RAB5A |
ENSG00000144566 |
-1.2653234974362857 |
[139] |
[47,15,NaN] |
-6 |
hSpCas9 |
negative selection |
10078959 |
19950908 |
19950931 |
3 |
+ |
28162770 |
P31FUJ |
viability |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
0.7295956830011683 |
[446] |
[870] |
8 |
hSpCas9 |
negative selection |
10221367 |
19950955 |
19950978 |
3 |
- |
28162770 |
P31FUJ |
viability |
CCAGAAGTACTAGTTTGAACTGG |
RAB5A |
ENSG00000144566 |
0.6251787907131935 |
[255] |
[463] |
7 |
hSpCas9 |
negative selection |
10221368 |
19950890 |
19950913 |
3 |
+ |
28162770 |
P31FUJ |
viability |
AATTTGGACATGGCTAGTCGAGG |
RAB5A |
ENSG00000144566 |
0.28802995888706207 |
[252] |
[362] |
3 |
hSpCas9 |
negative selection |
10221369 |
19950984 |
19951007 |
3 |
- |
28162770 |
P31FUJ |
viability |
TAGGCTTGATTTGCCAACAGCGG |
RAB5A |
ENSG00000144566 |
0.4056896927235726 |
[193] |
[301] |
4 |
hSpCas9 |
negative selection |
10221370 |
19950924 |
19950947 |
3 |
- |
28162770 |
P31FUJ |
viability |
ATTTCCCGTATTTGGCCCGTTGG |
RAB5A |
ENSG00000144566 |
0.8681471831554792 |
[475] |
[1020] |
8 |
hSpCas9 |
negative selection |
10221371 |
19950908 |
19950931 |
3 |
+ |
28162770 |
TF1 |
viability |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
NaN |
[NaN] |
[556] |
1 |
hSpCas9 |
negative selection |
10390733 |
19950955 |
19950978 |
3 |
- |
28162770 |
TF1 |
viability |
CCAGAAGTACTAGTTTGAACTGG |
RAB5A |
ENSG00000144566 |
NaN |
[NaN] |
[191] |
1 |
hSpCas9 |
negative selection |
10390734 |
19950890 |
19950913 |
3 |
+ |
28162770 |
TF1 |
viability |
AATTTGGACATGGCTAGTCGAGG |
RAB5A |
ENSG00000144566 |
NaN |
[NaN] |
[340] |
1 |
hSpCas9 |
negative selection |
10390735 |
19950984 |
19951007 |
3 |
- |
28162770 |
TF1 |
viability |
TAGGCTTGATTTGCCAACAGCGG |
RAB5A |
ENSG00000144566 |
NaN |
[NaN] |
[71] |
1 |
hSpCas9 |
negative selection |
10390736 |
19950924 |
19950947 |
3 |
- |
28162770 |
TF1 |
viability |
ATTTCCCGTATTTGGCCCGTTGG |
RAB5A |
ENSG00000144566 |
NaN |
[NaN] |
[693] |
1 |
hSpCas9 |
negative selection |
10390737 |
19950908 |
19950931 |
3 |
+ |
28162770 |
SKM1 |
viability |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
0.1170693033356629 |
[132] |
[254] |
1 |
hSpCas9 |
negative selection |
10560099 |
19950955 |
19950978 |
3 |
- |
28162770 |
SKM1 |
viability |
CCAGAAGTACTAGTTTGAACTGG |
RAB5A |
ENSG00000144566 |
0.47135724466858586 |
[50] |
[124] |
4 |
hSpCas9 |
negative selection |
10560100 |
19950890 |
19950913 |
3 |
+ |
28162770 |
SKM1 |
viability |
AATTTGGACATGGCTAGTCGAGG |
RAB5A |
ENSG00000144566 |
1.261656231024904 |
[66] |
[283] |
9 |
hSpCas9 |
negative selection |
10560101 |
19950984 |
19951007 |
3 |
- |
28162770 |
SKM1 |
viability |
TAGGCTTGATTTGCCAACAGCGG |
RAB5A |
ENSG00000144566 |
1.0619745056385113 |
[54] |
[202] |
8 |
hSpCas9 |
negative selection |
10560102 |
19950924 |
19950947 |
3 |
- |
28162770 |
SKM1 |
viability |
ATTTCCCGTATTTGGCCCGTTGG |
RAB5A |
ENSG00000144566 |
0.9322418875760361 |
[165] |
[559] |
8 |
hSpCas9 |
negative selection |
10560103 |
19950908 |
19950931 |
3 |
+ |
28162770 |
SKM1 |
viability |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
0.1170693033356629 |
[132] |
[254] |
1 |
hSpCas9 |
negative selection |
10729465 |
19950955 |
19950978 |
3 |
- |
28162770 |
SKM1 |
viability |
CCAGAAGTACTAGTTTGAACTGG |
RAB5A |
ENSG00000144566 |
0.47135724466858586 |
[50] |
[124] |
4 |
hSpCas9 |
negative selection |
10729466 |
19950890 |
19950913 |
3 |
+ |
28162770 |
SKM1 |
viability |
AATTTGGACATGGCTAGTCGAGG |
RAB5A |
ENSG00000144566 |
1.261656231024904 |
[66] |
[283] |
9 |
hSpCas9 |
negative selection |
10729467 |
19950984 |
19951007 |
3 |
- |
28162770 |
SKM1 |
viability |
TAGGCTTGATTTGCCAACAGCGG |
RAB5A |
ENSG00000144566 |
1.0619745056385113 |
[54] |
[202] |
8 |
hSpCas9 |
negative selection |
10729468 |
19950924 |
19950947 |
3 |
- |
28162770 |
SKM1 |
viability |
ATTTCCCGTATTTGGCCCGTTGG |
RAB5A |
ENSG00000144566 |
0.9322418875760361 |
[165] |
[559] |
8 |
hSpCas9 |
negative selection |
10729469 |
19950908 |
19950931 |
3 |
+ |
28162770 |
PL21 |
viability |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
0.5701619975777277 |
[471] |
[304] |
5 |
hSpCas9 |
negative selection |
10898831 |
19950955 |
19950978 |
3 |
- |
28162770 |
PL21 |
viability |
CCAGAAGTACTAGTTTGAACTGG |
RAB5A |
ENSG00000144566 |
-2.0201903403902355 |
[232] |
[24] |
-8 |
hSpCas9 |
negative selection |
10898832 |
19950890 |
19950913 |
3 |
+ |
28162770 |
PL21 |
viability |
AATTTGGACATGGCTAGTCGAGG |
RAB5A |
ENSG00000144566 |
1.3597962804778052 |
[281] |
[314] |
9 |
hSpCas9 |
negative selection |
10898833 |
19950984 |
19951007 |
3 |
- |
28162770 |
PL21 |
viability |
TAGGCTTGATTTGCCAACAGCGG |
RAB5A |
ENSG00000144566 |
-0.10918844361840851 |
[227] |
[91] |
-1 |
hSpCas9 |
negative selection |
10898834 |
19950924 |
19950947 |
3 |
- |
28162770 |
PL21 |
viability |
ATTTCCCGTATTTGGCCCGTTGG |
RAB5A |
ENSG00000144566 |
0.5118746102943306 |
[766] |
[475] |
4 |
hSpCas9 |
negative selection |
10898835 |
19950908 |
19950931 |
3 |
+ |
28162770 |
P31FUJ |
viability |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
0.7295956830011683 |
[446] |
[870] |
8 |
hSpCas9 |
negative selection |
11068197 |
19950955 |
19950978 |
3 |
- |
28162770 |
P31FUJ |
viability |
CCAGAAGTACTAGTTTGAACTGG |
RAB5A |
ENSG00000144566 |
0.6251787907131935 |
[255] |
[463] |
7 |
hSpCas9 |
negative selection |
11068198 |
19950890 |
19950913 |
3 |
+ |
28162770 |
P31FUJ |
viability |
AATTTGGACATGGCTAGTCGAGG |
RAB5A |
ENSG00000144566 |
0.28802995888706207 |
[252] |
[362] |
3 |
hSpCas9 |
negative selection |
11068199 |
19950984 |
19951007 |
3 |
- |
28162770 |
P31FUJ |
viability |
TAGGCTTGATTTGCCAACAGCGG |
RAB5A |
ENSG00000144566 |
0.4056896927235726 |
[193] |
[301] |
4 |
hSpCas9 |
negative selection |
11068200 |
19950924 |
19950947 |
3 |
- |
28162770 |
P31FUJ |
viability |
ATTTCCCGTATTTGGCCCGTTGG |
RAB5A |
ENSG00000144566 |
0.8681471831554792 |
[475] |
[1020] |
8 |
hSpCas9 |
negative selection |
11068201 |
19950908 |
19950931 |
3 |
+ |
28162770 |
OCIAML5 |
viability |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
0.8385324321248037 |
[214] |
[693] |
7 |
hSpCas9 |
negative selection |
11237563 |
19950955 |
19950978 |
3 |
- |
28162770 |
OCIAML5 |
viability |
CCAGAAGTACTAGTTTGAACTGG |
RAB5A |
ENSG00000144566 |
0.5472036125565303 |
[137] |
[363] |
5 |
hSpCas9 |
negative selection |
11237564 |
19950890 |
19950913 |
3 |
+ |
28162770 |
OCIAML5 |
viability |
AATTTGGACATGGCTAGTCGAGG |
RAB5A |
ENSG00000144566 |
0.682269856787191 |
[115] |
[335] |
6 |
hSpCas9 |
negative selection |
11237565 |
19950984 |
19951007 |
3 |
- |
28162770 |
OCIAML5 |
viability |
TAGGCTTGATTTGCCAACAGCGG |
RAB5A |
ENSG00000144566 |
0.6810569983375412 |
[84] |
[245] |
6 |
hSpCas9 |
negative selection |
11237566 |
19950924 |
19950947 |
3 |
- |
28162770 |
OCIAML5 |
viability |
ATTTCCCGTATTTGGCCCGTTGG |
RAB5A |
ENSG00000144566 |
1.0532965549979276 |
[251] |
[943] |
8 |
hSpCas9 |
negative selection |
11237567 |
19950908 |
19950931 |
3 |
+ |
28162770 |
EOL1 |
viability |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
0.676508103966603 |
[803] |
[676] |
6 |
hSpCas9 |
negative selection |
11406929 |
19950955 |
19950978 |
3 |
- |
28162770 |
EOL1 |
viability |
CCAGAAGTACTAGTTTGAACTGG |
RAB5A |
ENSG00000144566 |
1.07731805197378 |
[187] |
[208] |
8 |
hSpCas9 |
negative selection |
11406930 |
19950890 |
19950913 |
3 |
+ |
28162770 |
EOL1 |
viability |
AATTTGGACATGGCTAGTCGAGG |
RAB5A |
ENSG00000144566 |
0.608015817244116 |
[466] |
[374] |
5 |
hSpCas9 |
negative selection |
11406931 |
19950984 |
19951007 |
3 |
- |
28162770 |
EOL1 |
viability |
TAGGCTTGATTTGCCAACAGCGG |
RAB5A |
ENSG00000144566 |
0.6392781472620205 |
[339] |
[278] |
6 |
hSpCas9 |
negative selection |
11406932 |
19950924 |
19950947 |
3 |
- |
28162770 |
EOL1 |
viability |
ATTTCCCGTATTTGGCCCGTTGG |
RAB5A |
ENSG00000144566 |
1.0186083150552978 |
[1231] |
[1314] |
8 |
hSpCas9 |
negative selection |
11406933 |
19950908 |
19950931 |
3 |
+ |
28162770 |
MOLM13 |
viability |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
0.5154413110245977 |
[566] |
[585] |
4 |
hSpCas9 |
negative selection |
11576295 |
19950955 |
19950978 |
3 |
- |
28162770 |
MOLM13 |
viability |
CCAGAAGTACTAGTTTGAACTGG |
RAB5A |
ENSG00000144566 |
-0.8199768772691508 |
[292] |
[119] |
-4 |
hSpCas9 |
negative selection |
11576296 |
19950890 |
19950913 |
3 |
+ |
28162770 |
MOLM13 |
viability |
AATTTGGACATGGCTAGTCGAGG |
RAB5A |
ENSG00000144566 |
1.7547011706614986 |
[340] |
[831] |
9 |
hSpCas9 |
negative selection |
11576297 |
19950984 |
19951007 |
3 |
- |
28162770 |
MOLM13 |
viability |
TAGGCTTGATTTGCCAACAGCGG |
RAB5A |
ENSG00000144566 |
0.6798997843539059 |
[258] |
[299] |
5 |
hSpCas9 |
negative selection |
11576298 |
19950924 |
19950947 |
3 |
- |
28162770 |
MOLM13 |
viability |
ATTTCCCGTATTTGGCCCGTTGG |
RAB5A |
ENSG00000144566 |
1.2225372532713383 |
[891] |
[1504] |
8 |
hSpCas9 |
negative selection |
11576299 |
19950908 |
19950931 |
3 |
+ |
28162770 |
HEL |
viability |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
0.7676041108240179 |
[541] |
[590] |
6 |
hSpCas9 |
negative selection |
11745661 |
19950955 |
19950978 |
3 |
- |
28162770 |
HEL |
viability |
CCAGAAGTACTAGTTTGAACTGG |
RAB5A |
ENSG00000144566 |
0.07242310724360213 |
[195] |
[131] |
0 |
hSpCas9 |
negative selection |
11745662 |
19950890 |
19950913 |
3 |
+ |
28162770 |
HEL |
viability |
AATTTGGACATGGCTAGTCGAGG |
RAB5A |
ENSG00000144566 |
0.9600305167670006 |
[373] |
[465] |
8 |
hSpCas9 |
negative selection |
11745663 |
19950984 |
19951007 |
3 |
- |
28162770 |
HEL |
viability |
TAGGCTTGATTTGCCAACAGCGG |
RAB5A |
ENSG00000144566 |
0.4455735570205788 |
[273] |
[238] |
4 |
hSpCas9 |
negative selection |
11745664 |
19950924 |
19950947 |
3 |
- |
28162770 |
HEL |
viability |
ATTTCCCGTATTTGGCCCGTTGG |
RAB5A |
ENSG00000144566 |
0.9863824080434278 |
[843] |
[1070] |
8 |
hSpCas9 |
negative selection |
11745665 |
19950908 |
19950931 |
3 |
+ |
28162770 |
MV411 |
viability |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
0.699169850042302 |
[426] |
[583] |
6 |
hSpCas9 |
negative selection |
11915027 |
19950955 |
19950978 |
3 |
- |
28162770 |
MV411 |
viability |
CCAGAAGTACTAGTTTGAACTGG |
RAB5A |
ENSG00000144566 |
0.16613744868092728 |
[145] |
[137] |
1 |
hSpCas9 |
negative selection |
11915028 |
19950890 |
19950913 |
3 |
+ |
28162770 |
MV411 |
viability |
AATTTGGACATGGCTAGTCGAGG |
RAB5A |
ENSG00000144566 |
0.31512435829434976 |
[228] |
[239] |
2 |
hSpCas9 |
negative selection |
11915029 |
19950984 |
19951007 |
3 |
- |
28162770 |
MV411 |
viability |
TAGGCTTGATTTGCCAACAGCGG |
RAB5A |
ENSG00000144566 |
-0.23954979037508334 |
[184] |
[131] |
-2 |
hSpCas9 |
negative selection |
11915030 |
19950924 |
19950947 |
3 |
- |
28162770 |
MV411 |
viability |
ATTTCCCGTATTTGGCCCGTTGG |
RAB5A |
ENSG00000144566 |
0.7606554440005227 |
[638] |
[911] |
7 |
hSpCas9 |
negative selection |
11915031 |
19950908 |
19950931 |
3 |
+ |
28162770 |
MONOMAC1 |
viability |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
0.25267961674453154 |
[297] |
[406] |
2 |
hSpCas9 |
negative selection |
12084393 |
19950955 |
19950978 |
3 |
- |
28162770 |
MONOMAC1 |
viability |
CCAGAAGTACTAGTTTGAACTGG |
RAB5A |
ENSG00000144566 |
0.28838998011068806 |
[89] |
[125] |
3 |
hSpCas9 |
negative selection |
12084394 |
19950890 |
19950913 |
3 |
+ |
28162770 |
MONOMAC1 |
viability |
AATTTGGACATGGCTAGTCGAGG |
RAB5A |
ENSG00000144566 |
0.7294065459703654 |
[170] |
[324] |
7 |
hSpCas9 |
negative selection |
12084395 |
19950984 |
19951007 |
3 |
- |
28162770 |
MONOMAC1 |
viability |
TAGGCTTGATTTGCCAACAGCGG |
RAB5A |
ENSG00000144566 |
-0.016464601417733052 |
[134] |
[152] |
0 |
hSpCas9 |
negative selection |
12084396 |
19950924 |
19950947 |
3 |
- |
28162770 |
MONOMAC1 |
viability |
ATTTCCCGTATTTGGCCCGTTGG |
RAB5A |
ENSG00000144566 |
0.5722723444221645 |
[493] |
[841] |
5 |
hSpCas9 |
negative selection |
12084397 |
19950908 |
19950931 |
3 |
+ |
28162770 |
OCIAML2 |
viability |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
0.5030588976419914 |
[82] |
[651] |
5 |
hSpCas9 |
negative selection |
12253759 |
19950955 |
19950978 |
3 |
- |
28162770 |
OCIAML2 |
viability |
CCAGAAGTACTAGTTTGAACTGG |
RAB5A |
ENSG00000144566 |
0.4769027548637032 |
[27] |
[215] |
4 |
hSpCas9 |
negative selection |
12253760 |
19950890 |
19950913 |
3 |
+ |
28162770 |
OCIAML2 |
viability |
AATTTGGACATGGCTAGTCGAGG |
RAB5A |
ENSG00000144566 |
0.7792433325163938 |
[38] |
[370] |
7 |
hSpCas9 |
negative selection |
12253761 |
19950984 |
19951007 |
3 |
- |
28162770 |
OCIAML2 |
viability |
TAGGCTTGATTTGCCAACAGCGG |
RAB5A |
ENSG00000144566 |
-0.15774686995780587 |
[31] |
[158] |
-1 |
hSpCas9 |
negative selection |
12253762 |
19950924 |
19950947 |
3 |
- |
28162770 |
OCIAML2 |
viability |
ATTTCCCGTATTTGGCCCGTTGG |
RAB5A |
ENSG00000144566 |
1.0939535948741552 |
[100] |
[1194] |
9 |
hSpCas9 |
negative selection |
12253763 |
19950908 |
19950931 |
3 |
+ |
28162770 |
OCIAML3 |
viability |
CGAGGCGCAACAAGACCCAACGG |
RAB5A |
ENSG00000144566 |
0.11871040759536555 |
[107] |
[353] |
1 |
hSpCas9 |
negative selection |
12423125 |
19950955 |
19950978 |
3 |
- |
28162770 |
OCIAML3 |
viability |
CCAGAAGTACTAGTTTGAACTGG |
RAB5A |
ENSG00000144566 |
-0.0011830218300366568 |
[60] |
[183] |
0 |
hSpCas9 |
negative selection |
12423126 |
19950890 |
19950913 |
3 |
+ |
28162770 |
OCIAML3 |
viability |
AATTTGGACATGGCTAGTCGAGG |
RAB5A |
ENSG00000144566 |
0.10173529111553004 |
[70] |
[229] |
1 |
hSpCas9 |
negative selection |
12423127 |
19950984 |
19951007 |
3 |
- |
28162770 |
OCIAML3 |
viability |
TAGGCTTGATTTGCCAACAGCGG |
RAB5A |
ENSG00000144566 |
0.6311672216836118 |
[36] |
[172] |
6 |
hSpCas9 |
negative selection |
12423128 |
19950924 |
19950947 |
3 |
- |
28162770 |
OCIAML3 |
viability |
ATTTCCCGTATTTGGCCCGTTGG |
RAB5A |
ENSG00000144566 |
-0.4713883536602075 |
[185] |
[404] |
-4 |
hSpCas9 |
negative selection |
12423129 |