Crispr

Gene Info

  • Species: Human (Homo sapiens)
  • GeneID: 6253
  • Symbol: RTN2
  • Description: reticulon 2
DataSource: http://genomecrispr.dkfz.de/#!/results/RTN2

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Start The end chr strand pubmed cellline condition sequence symbol ensg log2fc rc_initial rc_final effect cas screentype index
45488676 45488699 19 + 26472758 Jiyoye viability CGAAGGTCAAGATGTAGAAGAGG RTN2 ENSG00000125744 0.1138831545793988 [211] [172] 0 hSpCas9 negative selection 141100
45488659 45488682 19 + 26472758 Jiyoye viability ATTGAAGATGGCACCCACGAAGG RTN2 ENSG00000125744 0.0911478880581954 [60] [48] 0 hSpCas9 negative selection 141101
45488472 45488495 19 + 26472758 Jiyoye viability TGGTGCTGCCGGTACAGCAGGGG RTN2 ENSG00000125744 0.6261851634476692 [60] [70] 4 hSpCas9 negative selection 141102
45486086 45486109 19 - 26472758 Jiyoye viability GATCGACCAATATGTGGGGTTGG RTN2 ENSG00000125744 -0.5928246184941266 [55] [27] -4 hSpCas9 negative selection 141103
45488676 45488699 19 + 26472758 KBM7 viability CGAAGGTCAAGATGTAGAAGAGG RTN2 ENSG00000125744 -0.08269645025404238 [891,651] [395,287] -1 hSpCas9 negative selection 332218
45488659 45488682 19 + 26472758 KBM7 viability ATTGAAGATGGCACCCACGAAGG RTN2 ENSG00000125744 -0.12534243686201024 [324,389] [131,177] -1 hSpCas9 negative selection 332219
45488472 45488495 19 + 26472758 KBM7 viability TGGTGCTGCCGGTACAGCAGGGG RTN2 ENSG00000125744 -0.3748130353663165 [342,368] [116,141] -3 hSpCas9 negative selection 332220
45486086 45486109 19 - 26472758 KBM7 viability GATCGACCAATATGTGGGGTTGG RTN2 ENSG00000125744 -0.5954767361274449 [181,247] [62,72] -5 hSpCas9 negative selection 332221
45488676 45488699 19 + 26472758 Raji viability CGAAGGTCAAGATGTAGAAGAGG RTN2 ENSG00000125744 -0.7786118359235692 [376] [50] -5 hSpCas9 negative selection 523336
45488659 45488682 19 + 26472758 Raji viability ATTGAAGATGGCACCCACGAAGG RTN2 ENSG00000125744 0.06696926692769145 [180] [43] 0 hSpCas9 negative selection 523337
45488472 45488495 19 + 26472758 Raji viability TGGTGCTGCCGGTACAGCAGGGG RTN2 ENSG00000125744 -0.34382757645872936 [174] [31] -3 hSpCas9 negative selection 523338
45486086 45486109 19 - 26472758 Raji viability GATCGACCAATATGTGGGGTTGG RTN2 ENSG00000125744 0.7329880205921016 [139] [53] 7 hSpCas9 negative selection 523339
45488676 45488699 19 + 26472758 K562 viability CGAAGGTCAAGATGTAGAAGAGG RTN2 ENSG00000125744 0.43135768726362655 [664] [756] 3 hSpCas9 negative selection 714454
45488659 45488682 19 + 26472758 K562 viability ATTGAAGATGGCACCCACGAAGG RTN2 ENSG00000125744 -0.21908026056904217 [221] [160] -1 hSpCas9 negative selection 714455
45488472 45488495 19 + 26472758 K562 viability TGGTGCTGCCGGTACAGCAGGGG RTN2 ENSG00000125744 1.1674078268396093 [201] [382] 8 hSpCas9 negative selection 714456
45486086 45486109 19 - 26472758 K562 viability GATCGACCAATATGTGGGGTTGG RTN2 ENSG00000125744 0.7298455548366889 [129] [181] 6 hSpCas9 negative selection 714457
45488676 45488699 + 24336571 A375 resistance to PLX after 7 days CGAAGGTCAAGATGTAGAAGAGG RTN2 ENSG00000125744 -0.06652900865339667 [13,11] [11,12] -2 hSpCas9 positive selection 3142157
45488637 45488660 - 24336571 A375 resistance to PLX after 7 days TGGTTTGACTCTTCTCATTCTGG RTN2 ENSG00000125744 0.036895621685427926 [29,29] [28,31] 1 hSpCas9 positive selection 3142158
45488676 45488699 + 24336571 A375 resistance to PLX after 14 days CGAAGGTCAAGATGTAGAAGAGG RTN2 ENSG00000125744 -0.5347972980005901 [16,9] [3,3] -6 hSpCas9 positive selection 3199950
45488637 45488660 - 24336571 A375 resistance to PLX after 14 days TGGTTTGACTCTTCTCATTCTGG RTN2 ENSG00000125744 0.37231736362721457 [33,19] [17,14] 3 hSpCas9 positive selection 3199951
45488676 45488699 + 24336571 A375 viability after 7 days CGAAGGTCAAGATGTAGAAGAGG RTN2 ENSG00000125744 0.21547992240364466 [11] [13,11] 3 hSpCas9 negative selection 3257743
45488637 45488660 - 24336571 A375 viability after 7 days TGGTTTGACTCTTCTCATTCTGG RTN2 ENSG00000125744 0.37431987895693697 [23] [29,29] 6 hSpCas9 negative selection 3257744
45488676 45488699 + 24336571 A375 viability after 14 days CGAAGGTCAAGATGTAGAAGAGG RTN2 ENSG00000125744 0.28057319795954316 [11] [16,9] 3 hSpCas9 negative selection 3315536
45488637 45488660 - 24336571 A375 viability after 14 days TGGTTTGACTCTTCTCATTCTGG RTN2 ENSG00000125744 0.2595535376036958 [23] [33,19] 3 hSpCas9 negative selection 3315537
45488676 45488699 19 + 26780180 A375 resistance to vemurafenib (GeCKOv1 lentiCRISPRv1) CGAAGGTCAAGATGTAGAAGAGG RTN2 ENSG00000125744 -0.32809597397316 [3] [1,1] -7 hSpCas9 positive selection 4167873
45488637 45488660 19 - 26780180 A375 resistance to vemurafenib (GeCKOv1 lentiCRISPRv1) TGGTTTGACTCTTCTCATTCTGG RTN2 ENSG00000125744 0.28581471386533003 [4] [3,3] 7 hSpCas9 positive selection 4167879
45488676 45488699 19 + 26780180 A375 resistance to vemurafenib (GeCKOv1 lentiGuide) CGAAGGTCAAGATGTAGAAGAGG RTN2 ENSG00000125744 0.4726635895473184 [3] [2,4,4,0] 3 hSpCas9 positive selection 4231895
45488637 45488660 19 - 26780180 A375 resistance to vemurafenib (GeCKOv1 lentiGuide) TGGTTTGACTCTTCTCATTCTGG RTN2 ENSG00000125744 0.26290341856196875 [4] [3,3,3,0] 2 hSpCas9 positive selection 4231901
45488660 45488682 19 + 27760321 OCIAML3 viability TTGAAGATGGCACCCACGAAGG RTN2 ENSG00000125744 0.7494980283279244 [564,422] [564,746] 8 hSpCas9 negative selection 4436312
45488660 45488682 19 + 27760321 OCIAML2 viability TTGAAGATGGCACCCACGAAGG RTN2 ENSG00000125744 0.6163023917932964 [564,422] [508,736] 8 hSpCas9 negative selection 4519775
45488660 45488682 19 + 27760321 MV411 viability TTGAAGATGGCACCCACGAAGG RTN2 ENSG00000125744 0.6008413421731125 [564,422] [235,871] 4 hSpCas9 negative selection 4603238
45488660 45488682 19 + 27760321 HL60 viability TTGAAGATGGCACCCACGAAGG RTN2 ENSG00000125744 0.5567419950178136 [564,422] [605,569] 6 hSpCas9 negative selection 4686701
45488660 45488682 19 + 27760321 HT1080 viability TTGAAGATGGCACCCACGAAGG RTN2 ENSG00000125744 -0.058064078055531834 [422,329] [155,130] 0 hSpCas9 negative selection 4770164
45488660 45488682 19 + 27760321 HT29 viability after 7 days TTGAAGATGGCACCCACGAAGG RTN2 ENSG00000125744 0.2566026275531587 [422,329] [719,416,615] 4 hSpCas9 negative selection 4853627
45488660 45488682 19 + 27760321 HT29 viability after 25 days TTGAAGATGGCACCCACGAAGG RTN2 ENSG00000125744 0.016055917304900816 [422,329] [417,371,524] 0 hSpCas9 negative selection 4937090
45488660 45488682 19 + 27760321 HT29 viability after 22 days TTGAAGATGGCACCCACGAAGG RTN2 ENSG00000125744 0.026659085519367312 [422,329] [436,473,418] 0 hSpCas9 negative selection 5020553
45488660 45488682 19 + 27760321 HT29 viability after 19 days TTGAAGATGGCACCCACGAAGG RTN2 ENSG00000125744 0.03366044569217316 [422,329] [534,521,280] 0 hSpCas9 negative selection 5104016
45488660 45488682 19 + 27760321 HT29 viability after 16 days TTGAAGATGGCACCCACGAAGG RTN2 ENSG00000125744 0.020854908900868524 [422,329] [539,259,496] 0 hSpCas9 negative selection 5187479
45488660 45488682 19 + 27760321 HT29 viability after 13 days TTGAAGATGGCACCCACGAAGG RTN2 ENSG00000125744 0.21393572895910618 [422,329] [583,522,417] 2 hSpCas9 negative selection 5270942
45488660 45488682 19 + 27760321 HT29 viability after 10 days TTGAAGATGGCACCCACGAAGG RTN2 ENSG00000125744 0.11692043604165155 [422,329] [653,521,356] 1 hSpCas9 negative selection 5354405
45488660 45488682 19 + 27760321 MOLM13 viability TTGAAGATGGCACCCACGAAGG RTN2 ENSG00000125744 0.7591643724339581 [564,422] [242,658] 5 hSpCas9 negative selection 5437868
45488676 45488699 19 + 28162770 P31FUJ viability CGAAGGTCAAGATGTAGAAGAGG RTN2 ENSG00000125744 -0.00873515138567671 [368] [430] 0 hSpCas9 negative selection 10228816
45488659 45488682 19 + 28162770 P31FUJ viability ATTGAAGATGGCACCCACGAAGG RTN2 ENSG00000125744 0.2300231938187306 [192] [265] 2 hSpCas9 negative selection 10228817
45488472 45488495 19 + 28162770 P31FUJ viability TGGTGCTGCCGGTACAGCAGGGG RTN2 ENSG00000125744 0.2370376801030522 [225] [312] 2 hSpCas9 negative selection 10228818
45486086 45486109 19 - 28162770 P31FUJ viability GATCGACCAATATGTGGGGTTGG RTN2 ENSG00000125744 0.14883213659725125 [141] [184] 1 hSpCas9 negative selection 10228819
45488676 45488699 19 + 28162770 TF1 viability CGAAGGTCAAGATGTAGAAGAGG RTN2 ENSG00000125744 NaN [NaN] [380] 1 hSpCas9 negative selection 10398182
45488659 45488682 19 + 28162770 TF1 viability ATTGAAGATGGCACCCACGAAGG RTN2 ENSG00000125744 NaN [NaN] [129] 1 hSpCas9 negative selection 10398183
45488472 45488495 19 + 28162770 TF1 viability TGGTGCTGCCGGTACAGCAGGGG RTN2 ENSG00000125744 NaN [NaN] [188] 1 hSpCas9 negative selection 10398184
45486086 45486109 19 - 28162770 TF1 viability GATCGACCAATATGTGGGGTTGG RTN2 ENSG00000125744 NaN [NaN] [35] 1 hSpCas9 negative selection 10398185
45488676 45488699 19 + 28162770 SKM1 viability CGAAGGTCAAGATGTAGAAGAGG RTN2 ENSG00000125744 -0.21258615357631033 [77] [118] -2 hSpCas9 negative selection 10567548
45488659 45488682 19 + 28162770 SKM1 viability ATTGAAGATGGCACCCACGAAGG RTN2 ENSG00000125744 -0.23703919730084944 [51] [77] -2 hSpCas9 negative selection 10567549
45488472 45488495 19 + 28162770 SKM1 viability TGGTGCTGCCGGTACAGCAGGGG RTN2 ENSG00000125744 0.7462820615525203 [28] [85] 7 hSpCas9 negative selection 10567550
45486086 45486109 19 - 28162770 SKM1 viability GATCGACCAATATGTGGGGTTGG RTN2 ENSG00000125744 1.3921231073308418 [24] [115] 9 hSpCas9 negative selection 10567551
45488676 45488699 19 + 28162770 SKM1 viability CGAAGGTCAAGATGTAGAAGAGG RTN2 ENSG00000125744 -0.21258615357631033 [77] [118] -2 hSpCas9 negative selection 10736914
45488659 45488682 19 + 28162770 SKM1 viability ATTGAAGATGGCACCCACGAAGG RTN2 ENSG00000125744 -0.23703919730084944 [51] [77] -2 hSpCas9 negative selection 10736915
45488472 45488495 19 + 28162770 SKM1 viability TGGTGCTGCCGGTACAGCAGGGG RTN2 ENSG00000125744 0.7462820615525203 [28] [85] 7 hSpCas9 negative selection 10736916
45486086 45486109 19 - 28162770 SKM1 viability GATCGACCAATATGTGGGGTTGG RTN2 ENSG00000125744 1.3921231073308418 [24] [115] 9 hSpCas9 negative selection 10736917
45488676 45488699 19 + 28162770 PL21 viability CGAAGGTCAAGATGTAGAAGAGG RTN2 ENSG00000125744 0.20013961448932016 [273] [136] 1 hSpCas9 negative selection 10906280
45488659 45488682 19 + 28162770 PL21 viability ATTGAAGATGGCACCCACGAAGG RTN2 ENSG00000125744 -1.7877875532101046 [118] [14] -8 hSpCas9 negative selection 10906281
45488472 45488495 19 + 28162770 PL21 viability TGGTGCTGCCGGTACAGCAGGGG RTN2 ENSG00000125744 -1.00373271887633 [128] [27] -6 hSpCas9 negative selection 10906282
45486086 45486109 19 - 28162770 PL21 viability GATCGACCAATATGTGGGGTTGG RTN2 ENSG00000125744 1.6997106239798316 [57] [81] 9 hSpCas9 negative selection 10906283
45488676 45488699 19 + 28162770 P31FUJ viability CGAAGGTCAAGATGTAGAAGAGG RTN2 ENSG00000125744 -0.00873515138567671 [368] [430] 0 hSpCas9 negative selection 11075646
45488659 45488682 19 + 28162770 P31FUJ viability ATTGAAGATGGCACCCACGAAGG RTN2 ENSG00000125744 0.2300231938187306 [192] [265] 2 hSpCas9 negative selection 11075647
45488472 45488495 19 + 28162770 P31FUJ viability TGGTGCTGCCGGTACAGCAGGGG RTN2 ENSG00000125744 0.2370376801030522 [225] [312] 2 hSpCas9 negative selection 11075648
45486086 45486109 19 - 28162770 P31FUJ viability GATCGACCAATATGTGGGGTTGG RTN2 ENSG00000125744 0.14883213659725125 [141] [184] 1 hSpCas9 negative selection 11075649
45488676 45488699 19 + 28162770 OCIAML5 viability CGAAGGTCAAGATGTAGAAGAGG RTN2 ENSG00000125744 0.6313080581780006 [200] [561] 5 hSpCas9 negative selection 11245012
45488659 45488682 19 + 28162770 OCIAML5 viability ATTGAAGATGGCACCCACGAAGG RTN2 ENSG00000125744 -0.06447490362782271 [83] [144] 0 hSpCas9 negative selection 11245013
45488472 45488495 19 + 28162770 OCIAML5 viability TGGTGCTGCCGGTACAGCAGGGG RTN2 ENSG00000125744 1.2874847815347965 [63] [281] 9 hSpCas9 negative selection 11245014
45486086 45486109 19 - 28162770 OCIAML5 viability GATCGACCAATATGTGGGGTTGG RTN2 ENSG00000125744 0.8791166707082031 [49] [165] 7 hSpCas9 negative selection 11245015
45488676 45488699 19 + 28162770 EOL1 viability CGAAGGTCAAGATGTAGAAGAGG RTN2 ENSG00000125744 -0.036352408740525144 [363] [186] 0 hSpCas9 negative selection 11414378
45488659 45488682 19 + 28162770 EOL1 viability ATTGAAGATGGCACCCACGAAGG RTN2 ENSG00000125744 0.5192912930842761 [195] [147] 5 hSpCas9 negative selection 11414379
45488472 45488495 19 + 28162770 EOL1 viability TGGTGCTGCCGGTACAGCAGGGG RTN2 ENSG00000125744 -0.03982831869874415 [159] [81] 0 hSpCas9 negative selection 11414380
45486086 45486109 19 - 28162770 EOL1 viability GATCGACCAATATGTGGGGTTGG RTN2 ENSG00000125744 -0.1093995603528033 [85] [41] -1 hSpCas9 negative selection 11414381
45488676 45488699 19 + 28162770 MOLM13 viability CGAAGGTCAAGATGTAGAAGAGG RTN2 ENSG00000125744 0.13713743627021036 [409] [325] 1 hSpCas9 negative selection 11583744
45488659 45488682 19 + 28162770 MOLM13 viability ATTGAAGATGGCACCCACGAAGG RTN2 ENSG00000125744 -0.2426040012604364 [215] [131] -1 hSpCas9 negative selection 11583745
45488472 45488495 19 + 28162770 MOLM13 viability TGGTGCTGCCGGTACAGCAGGGG RTN2 ENSG00000125744 -0.7314194266788276 [185] [80] -4 hSpCas9 negative selection 11583746
45486086 45486109 19 - 28162770 MOLM13 viability GATCGACCAATATGTGGGGTTGG RTN2 ENSG00000125744 1.1377407798522483 [87] [139] 8 hSpCas9 negative selection 11583747
45488676 45488699 19 + 28162770 HEL viability CGAAGGTCAAGATGTAGAAGAGG RTN2 ENSG00000125744 0.10378872903603703 [323] [222] 0 hSpCas9 negative selection 11753110
45488659 45488682 19 + 28162770 HEL viability ATTGAAGATGGCACCCACGAAGG RTN2 ENSG00000125744 -0.6750014659235717 [171] [68] -4 hSpCas9 negative selection 11753111
45488472 45488495 19 + 28162770 HEL viability TGGTGCTGCCGGTACAGCAGGGG RTN2 ENSG00000125744 -0.5470857268796603 [145] [63] -4 hSpCas9 negative selection 11753112
45486086 45486109 19 - 28162770 HEL viability GATCGACCAATATGTGGGGTTGG RTN2 ENSG00000125744 -0.04531716168490285 [115] [71] 0 hSpCas9 negative selection 11753113
45488676 45488699 19 + 28162770 MV411 viability CGAAGGTCAAGATGTAGAAGAGG RTN2 ENSG00000125744 -0.34297938003048906 [264] [175] -3 hSpCas9 negative selection 11922476
45488659 45488682 19 + 28162770 MV411 viability ATTGAAGATGGCACCCACGAAGG RTN2 ENSG00000125744 -0.7119204647198788 [104] [53] -5 hSpCas9 negative selection 11922477
45488472 45488495 19 + 28162770 MV411 viability TGGTGCTGCCGGTACAGCAGGGG RTN2 ENSG00000125744 -0.1745863788121753 [137] [102] -1 hSpCas9 negative selection 11922478
45486086 45486109 19 - 28162770 MV411 viability GATCGACCAATATGTGGGGTTGG RTN2 ENSG00000125744 0.4962580973968683 [84] [100] 4 hSpCas9 negative selection 11922479
45488676 45488699 19 + 28162770 MONOMAC1 viability CGAAGGTCAAGATGTAGAAGAGG RTN2 ENSG00000125744 -0.12345571467844635 [171] [180] -1 hSpCas9 negative selection 12091842
45488659 45488682 19 + 28162770 MONOMAC1 viability ATTGAAGATGGCACCCACGAAGG RTN2 ENSG00000125744 -0.08897710120210067 [89] [96] -1 hSpCas9 negative selection 12091843
45488472 45488495 19 + 28162770 MONOMAC1 viability TGGTGCTGCCGGTACAGCAGGGG RTN2 ENSG00000125744 -0.5391428238845465 [89] [70] -4 hSpCas9 negative selection 12091844
45486086 45486109 19 - 28162770 MONOMAC1 viability GATCGACCAATATGTGGGGTTGG RTN2 ENSG00000125744 -1.3345403708094885 [65] [29] -7 hSpCas9 negative selection 12091845
45488676 45488699 19 + 28162770 OCIAML2 viability CGAAGGTCAAGATGTAGAAGAGG RTN2 ENSG00000125744 0.5157811100098837 [39] [316] 5 hSpCas9 negative selection 12261208
45488659 45488682 19 + 28162770 OCIAML2 viability ATTGAAGATGGCACCCACGAAGG RTN2 ENSG00000125744 0.529370174757839 [14] [119] 5 hSpCas9 negative selection 12261209
45488472 45488495 19 + 28162770 OCIAML2 viability TGGTGCTGCCGGTACAGCAGGGG RTN2 ENSG00000125744 0.05509347210431889 [28] [166] 0 hSpCas9 negative selection 12261210
45486086 45486109 19 - 28162770 OCIAML2 viability GATCGACCAATATGTGGGGTTGG RTN2 ENSG00000125744 0.4622559788993019 [10] [83] 4 hSpCas9 negative selection 12261211
45488676 45488699 19 + 28162770 OCIAML3 viability CGAAGGTCAAGATGTAGAAGAGG RTN2 ENSG00000125744 0.7209508997483572 [82] [412] 6 hSpCas9 negative selection 12430574
45488659 45488682 19 + 28162770 OCIAML3 viability ATTGAAGATGGCACCCACGAAGG RTN2 ENSG00000125744 -0.09310940439148147 [52] [149] 0 hSpCas9 negative selection 12430575
45488472 45488495 19 + 28162770 OCIAML3 viability TGGTGCTGCCGGTACAGCAGGGG RTN2 ENSG00000125744 1.360188670062712 [27] [216] 9 hSpCas9 negative selection 12430576
45486086 45486109 19 - 28162770 OCIAML3 viability GATCGACCAATATGTGGGGTTGG RTN2 ENSG00000125744 -0.26058390659897146 [24] [62] -2 hSpCas9 negative selection 12430577