| 113227290 |
113227313 |
9 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
TTGCCCAGGCTGGAGTGCAGGAG |
SLC31A1 |
ENSG00000136868 |
0.9977856233970179 |
[9,4] |
[4,0] |
4 |
dCas9-VP64 |
positive selection |
2435916 |
113246898 |
113246921 |
9 |
- |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
CGCCTGTAATCTCAGCACTTAGG |
SLC31A1 |
ENSG00000136868 |
-0.6796005969874881 |
[92,259] |
[10,38] |
-3 |
dCas9-VP64 |
positive selection |
2447686 |
113227290 |
113227313 |
9 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
TTGCCCAGGCTGGAGTGCAGGAG |
SLC31A1 |
ENSG00000136868 |
-0.1814090993543942 |
[50,40] |
[18,6] |
-2 |
dCas9-VP64 |
positive selection |
2531171 |
113246898 |
113246921 |
9 |
- |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
CGCCTGTAATCTCAGCACTTAGG |
SLC31A1 |
ENSG00000136868 |
0.2134968510682193 |
[79,136] |
[55,26] |
1 |
dCas9-VP64 |
positive selection |
2542941 |
113221797 |
113221820 |
9 |
+ |
27661255 |
K562 |
viability |
GACTGGAGGGTTAAAGACTGGGG |
SLC31A1 |
ENSG00000136868 |
-0.26372900994682613 |
[1076,1101] |
[790,667] |
-6 |
dCas9-KRAB |
negative selection |
5511983 |
113222029 |
113222052 |
9 |
+ |
27661255 |
K562 |
viability |
GCACCCGGGTGACTAGTCCGAGG |
SLC31A1 |
ENSG00000136868 |
-0.14069594749591288 |
[778,783] |
[610,527] |
-5 |
dCas9-KRAB |
negative selection |
5511984 |
113221963 |
113221986 |
9 |
- |
27661255 |
K562 |
viability |
GAGGCCGGGATTGAAATCCATGG |
SLC31A1 |
ENSG00000136868 |
0.00168317739742041 |
[1124,1369] |
[1032,960] |
0 |
dCas9-KRAB |
negative selection |
5511985 |