| 11034571 |
11034594 |
3 |
- |
26472758 |
Jiyoye |
viability |
GGGGAAAACATAGTTTCCCATGG |
SLC6A1 |
ENSG00000157103 |
2.7291034763932354 |
[0] |
[4] |
9 |
hSpCas9 |
negative selection |
150682 |
11020202 |
11020225 |
3 |
+ |
26472758 |
Jiyoye |
viability |
TGTCCTTGCAGACACTGCCGTGG |
SLC6A1 |
ENSG00000157103 |
0.4921959659201798 |
[312] |
[331] |
4 |
hSpCas9 |
negative selection |
150683 |
11020298 |
11020321 |
3 |
- |
26472758 |
Jiyoye |
viability |
CCAGAACTCCACCACAGCGCTGG |
SLC6A1 |
ENSG00000157103 |
4.223868168142814 |
[10] |
[154] |
9 |
hSpCas9 |
negative selection |
150684 |
11022345 |
11022368 |
3 |
+ |
26472758 |
Jiyoye |
viability |
GCATCAGATGACGGACGGGCTGG |
SLC6A1 |
ENSG00000157103 |
1.0058128191241062 |
[69] |
[105] |
6 |
hSpCas9 |
negative selection |
150685 |
11022410 |
11022433 |
3 |
- |
26472758 |
Jiyoye |
viability |
ATACACAAGGATCCAGGCGATGG |
SLC6A1 |
ENSG00000157103 |
5.8990284778355475 |
[0] |
[44] |
9 |
hSpCas9 |
negative selection |
150686 |
11028745 |
11028768 |
3 |
+ |
26472758 |
Jiyoye |
viability |
GGCGTTCCTGGCATACCCAGAGG |
SLC6A1 |
ENSG00000157103 |
-0.9240305269694996 |
[233] |
[92] |
-6 |
hSpCas9 |
negative selection |
150687 |
11028789 |
11028812 |
3 |
- |
26472758 |
Jiyoye |
viability |
GAAGAGGATGGCCCAGAGTGGGG |
SLC6A1 |
ENSG00000157103 |
-0.5296307920069325 |
[200] |
[104] |
-4 |
hSpCas9 |
negative selection |
150688 |
11029232 |
11029255 |
3 |
+ |
26472758 |
Jiyoye |
viability |
GGAGGGCTTCATCACAGCCCTGG |
SLC6A1 |
ENSG00000157103 |
-0.23437064758165027 |
[233] |
[149] |
-2 |
hSpCas9 |
negative selection |
150689 |
11029274 |
11029297 |
3 |
- |
26472758 |
Jiyoye |
viability |
AGAGCTCTCTGCGGTTGCGGAGG |
SLC6A1 |
ENSG00000157103 |
-0.1722489356738529 |
[259] |
[173] |
-1 |
hSpCas9 |
negative selection |
150690 |
11034571 |
11034594 |
3 |
- |
26472758 |
KBM7 |
viability |
GGGGAAAACATAGTTTCCCATGG |
SLC6A1 |
ENSG00000157103 |
1.372308041473493 |
[40,21] |
[77,0] |
9 |
hSpCas9 |
negative selection |
341800 |
11020202 |
11020225 |
3 |
+ |
26472758 |
KBM7 |
viability |
TGTCCTTGCAGACACTGCCGTGG |
SLC6A1 |
ENSG00000157103 |
0.6293210997795768 |
[1224,936] |
[961,615] |
7 |
hSpCas9 |
negative selection |
341801 |
11020298 |
11020321 |
3 |
- |
26472758 |
KBM7 |
viability |
CCAGAACTCCACCACAGCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.7039405726064337 |
[461,315] |
[365,228] |
7 |
hSpCas9 |
negative selection |
341802 |
11022345 |
11022368 |
3 |
+ |
26472758 |
KBM7 |
viability |
GCATCAGATGACGGACGGGCTGG |
SLC6A1 |
ENSG00000157103 |
0.7032321899462308 |
[471,299] |
[276,301] |
7 |
hSpCas9 |
negative selection |
341803 |
11022410 |
11022433 |
3 |
- |
26472758 |
KBM7 |
viability |
ATACACAAGGATCCAGGCGATGG |
SLC6A1 |
ENSG00000157103 |
2.1943679350214627 |
[144,93] |
[29,451] |
9 |
hSpCas9 |
negative selection |
341804 |
11028745 |
11028768 |
3 |
+ |
26472758 |
KBM7 |
viability |
GGCGTTCCTGGCATACCCAGAGG |
SLC6A1 |
ENSG00000157103 |
0.31610382978775625 |
[629,598] |
[359,360] |
3 |
hSpCas9 |
negative selection |
341805 |
11028789 |
11028812 |
3 |
- |
26472758 |
KBM7 |
viability |
GAAGAGGATGGCCCAGAGTGGGG |
SLC6A1 |
ENSG00000157103 |
0.3688300675052591 |
[563,417] |
[369,227] |
4 |
hSpCas9 |
negative selection |
341806 |
11029232 |
11029255 |
3 |
+ |
26472758 |
KBM7 |
viability |
GGAGGGCTTCATCACAGCCCTGG |
SLC6A1 |
ENSG00000157103 |
0.23557467336462823 |
[666,533] |
[324,334] |
2 |
hSpCas9 |
negative selection |
341807 |
11029274 |
11029297 |
3 |
- |
26472758 |
KBM7 |
viability |
AGAGCTCTCTGCGGTTGCGGAGG |
SLC6A1 |
ENSG00000157103 |
0.07380091100381647 |
[905,638] |
[388,366] |
0 |
hSpCas9 |
negative selection |
341808 |
11034571 |
11034594 |
3 |
- |
26472758 |
Raji |
viability |
GGGGAAAACATAGTTTCCCATGG |
SLC6A1 |
ENSG00000157103 |
-1.7995070602349195 |
[29] |
[1] |
-8 |
hSpCas9 |
negative selection |
532918 |
11020202 |
11020225 |
3 |
+ |
26472758 |
Raji |
viability |
TGTCCTTGCAGACACTGCCGTGG |
SLC6A1 |
ENSG00000157103 |
0.7425763722085178 |
[460] |
[178] |
7 |
hSpCas9 |
negative selection |
532919 |
11020298 |
11020321 |
3 |
- |
26472758 |
Raji |
viability |
CCAGAACTCCACCACAGCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.7587733978337314 |
[190] |
[74] |
7 |
hSpCas9 |
negative selection |
532920 |
11022345 |
11022368 |
3 |
+ |
26472758 |
Raji |
viability |
GCATCAGATGACGGACGGGCTGG |
SLC6A1 |
ENSG00000157103 |
-0.1627056279941449 |
[163] |
[33] |
-1 |
hSpCas9 |
negative selection |
532921 |
11022410 |
11022433 |
3 |
- |
26472758 |
Raji |
viability |
ATACACAAGGATCCAGGCGATGG |
SLC6A1 |
ENSG00000157103 |
-0.823353802189287 |
[121] |
[15] |
-6 |
hSpCas9 |
negative selection |
532922 |
11028745 |
11028768 |
3 |
+ |
26472758 |
Raji |
viability |
GGCGTTCCTGGCATACCCAGAGG |
SLC6A1 |
ENSG00000157103 |
0.2602580846233946 |
[330] |
[91] |
2 |
hSpCas9 |
negative selection |
532923 |
11028789 |
11028812 |
3 |
- |
26472758 |
Raji |
viability |
GAAGAGGATGGCCCAGAGTGGGG |
SLC6A1 |
ENSG00000157103 |
-0.00426182045530954 |
[375] |
[86] |
0 |
hSpCas9 |
negative selection |
532924 |
11029232 |
11029255 |
3 |
+ |
26472758 |
Raji |
viability |
GGAGGGCTTCATCACAGCCCTGG |
SLC6A1 |
ENSG00000157103 |
-0.43451024345567074 |
[395] |
[67] |
-4 |
hSpCas9 |
negative selection |
532925 |
11029274 |
11029297 |
3 |
- |
26472758 |
Raji |
viability |
AGAGCTCTCTGCGGTTGCGGAGG |
SLC6A1 |
ENSG00000157103 |
0.24718617521312236 |
[569] |
[156] |
2 |
hSpCas9 |
negative selection |
532926 |
11034571 |
11034594 |
3 |
- |
26472758 |
K562 |
viability |
GGGGAAAACATAGTTTCCCATGG |
SLC6A1 |
ENSG00000157103 |
0.24441872766644712 |
[34] |
[34] |
1 |
hSpCas9 |
negative selection |
724036 |
11020202 |
11020225 |
3 |
+ |
26472758 |
K562 |
viability |
TGTCCTTGCAGACACTGCCGTGG |
SLC6A1 |
ENSG00000157103 |
-0.5075630433216106 |
[836] |
[496] |
-3 |
hSpCas9 |
negative selection |
724037 |
11020298 |
11020321 |
3 |
- |
26472758 |
K562 |
viability |
CCAGAACTCCACCACAGCGCTGG |
SLC6A1 |
ENSG00000157103 |
-0.18088710706622396 |
[375] |
[279] |
-1 |
hSpCas9 |
negative selection |
724038 |
11022345 |
11022368 |
3 |
+ |
26472758 |
K562 |
viability |
GCATCAGATGACGGACGGGCTGG |
SLC6A1 |
ENSG00000157103 |
-0.7994840942103681 |
[366] |
[177] |
-5 |
hSpCas9 |
negative selection |
724039 |
11022410 |
11022433 |
3 |
- |
26472758 |
K562 |
viability |
ATACACAAGGATCCAGGCGATGG |
SLC6A1 |
ENSG00000157103 |
0.6773781349425532 |
[99] |
[134] |
5 |
hSpCas9 |
negative selection |
724040 |
11028745 |
11028768 |
3 |
+ |
26472758 |
K562 |
viability |
GGCGTTCCTGGCATACCCAGAGG |
SLC6A1 |
ENSG00000157103 |
0.3598959450863829 |
[383] |
[415] |
3 |
hSpCas9 |
negative selection |
724041 |
11028789 |
11028812 |
3 |
- |
26472758 |
K562 |
viability |
GAAGAGGATGGCCCAGAGTGGGG |
SLC6A1 |
ENSG00000157103 |
-0.09407721673940364 |
[415] |
[328] |
0 |
hSpCas9 |
negative selection |
724042 |
11029232 |
11029255 |
3 |
+ |
26472758 |
K562 |
viability |
GGAGGGCTTCATCACAGCCCTGG |
SLC6A1 |
ENSG00000157103 |
0.8067695314872316 |
[492] |
[727] |
6 |
hSpCas9 |
negative selection |
724043 |
11029274 |
11029297 |
3 |
- |
26472758 |
K562 |
viability |
AGAGCTCTCTGCGGTTGCGGAGG |
SLC6A1 |
ENSG00000157103 |
0.29374644003001515 |
[804] |
[832] |
2 |
hSpCas9 |
negative selection |
724044 |
11020202 |
11020225 |
3 |
+ |
26627737 |
DLD1 |
viability |
TGTCCTTGCAGACACTGCCGTGG |
SLC6A1 |
ENSG00000157103 |
-0.14790746425870133 |
[387] |
[99,160,74] |
-1 |
hSpCas9 |
negative selection |
818718 |
11022368 |
11022391 |
3 |
+ |
26627737 |
DLD1 |
viability |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
-0.0794723805708965 |
[394] |
[82,133,131] |
-1 |
hSpCas9 |
negative selection |
818719 |
11025519 |
11025542 |
3 |
- |
26627737 |
DLD1 |
viability |
GAGGATGCCCTCCTTGGCCCCGG |
SLC6A1 |
ENSG00000157103 |
1.2688119953236825 |
[93] |
[96,82,37] |
9 |
hSpCas9 |
negative selection |
818720 |
11020202 |
11020225 |
3 |
+ |
26627737 |
GBM cells |
viability after 5 days |
TGTCCTTGCAGACACTGCCGTGG |
SLC6A1 |
ENSG00000157103 |
0.20925399549783597 |
[124] |
[63,90] |
3 |
hSpCas9 |
negative selection |
901033 |
11022368 |
11022391 |
3 |
+ |
26627737 |
GBM cells |
viability after 5 days |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.10693417871499723 |
[244] |
[108,173] |
1 |
hSpCas9 |
negative selection |
901034 |
11025519 |
11025542 |
3 |
- |
26627737 |
GBM cells |
viability after 5 days |
GAGGATGCCCTCCTTGGCCCCGG |
SLC6A1 |
ENSG00000157103 |
-0.7724633776529439 |
[85] |
[40,12] |
-8 |
hSpCas9 |
negative selection |
901035 |
11020202 |
11020225 |
3 |
+ |
26627737 |
GBM cells |
viability after 13 days |
TGTCCTTGCAGACACTGCCGTGG |
SLC6A1 |
ENSG00000157103 |
0.5237579490945803 |
[124] |
[75,114] |
6 |
hSpCas9 |
negative selection |
983348 |
11022368 |
11022391 |
3 |
+ |
26627737 |
GBM cells |
viability after 13 days |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.4039924244881394 |
[244] |
[160,187] |
5 |
hSpCas9 |
negative selection |
983349 |
11025519 |
11025542 |
3 |
- |
26627737 |
GBM cells |
viability after 13 days |
GAGGATGCCCTCCTTGGCCCCGG |
SLC6A1 |
ENSG00000157103 |
-0.290939818010552 |
[85] |
[41,34] |
-3 |
hSpCas9 |
negative selection |
983350 |
11020202 |
11020225 |
3 |
+ |
26627737 |
GBM cells |
viability after 21 days |
TGTCCTTGCAGACACTGCCGTGG |
SLC6A1 |
ENSG00000157103 |
0.9819730091505801 |
[124] |
[130,136] |
8 |
hSpCas9 |
negative selection |
1065663 |
11022368 |
11022391 |
3 |
+ |
26627737 |
GBM cells |
viability after 21 days |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
-0.12474784394374641 |
[244] |
[131,112] |
-1 |
hSpCas9 |
negative selection |
1065664 |
11025519 |
11025542 |
3 |
- |
26627737 |
GBM cells |
viability after 21 days |
GAGGATGCCCTCCTTGGCCCCGG |
SLC6A1 |
ENSG00000157103 |
-1.8078641157104804 |
[85] |
[16,9] |
-8 |
hSpCas9 |
negative selection |
1065665 |
11020202 |
11020225 |
3 |
+ |
26627737 |
RPE1 |
viability after 9 days |
TGTCCTTGCAGACACTGCCGTGG |
SLC6A1 |
ENSG00000157103 |
-0.34883527610622345 |
[572] |
[70,230] |
-2 |
hSpCas9 |
negative selection |
1147978 |
11022368 |
11022391 |
3 |
+ |
26627737 |
RPE1 |
viability after 9 days |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
-0.019427546455836303 |
[705] |
[159,292] |
0 |
hSpCas9 |
negative selection |
1147979 |
11025519 |
11025542 |
3 |
- |
26627737 |
RPE1 |
viability after 9 days |
GAGGATGCCCTCCTTGGCCCCGG |
SLC6A1 |
ENSG00000157103 |
8.337876716324585 |
[0] |
[92,111] |
9 |
hSpCas9 |
negative selection |
1147980 |
11020202 |
11020225 |
3 |
+ |
26627737 |
RPE1 |
viability after 12 days |
TGTCCTTGCAGACACTGCCGTGG |
SLC6A1 |
ENSG00000157103 |
-0.587403161160359 |
[572] |
[100,103] |
-4 |
hSpCas9 |
negative selection |
1230293 |
11022368 |
11022391 |
3 |
+ |
26627737 |
RPE1 |
viability after 12 days |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
-0.21414008699403997 |
[705] |
[180,144] |
-1 |
hSpCas9 |
negative selection |
1230294 |
11025519 |
11025542 |
3 |
- |
26627737 |
RPE1 |
viability after 12 days |
GAGGATGCCCTCCTTGGCCCCGG |
SLC6A1 |
ENSG00000157103 |
7.576596523438585 |
[0] |
[43,58] |
9 |
hSpCas9 |
negative selection |
1230295 |
11020202 |
11020225 |
3 |
+ |
26627737 |
RPE1 |
viability after 15 days |
TGTCCTTGCAGACACTGCCGTGG |
SLC6A1 |
ENSG00000157103 |
-1.6437221200142962 |
[572] |
[58,44] |
-7 |
hSpCas9 |
negative selection |
1312608 |
11022368 |
11022391 |
3 |
+ |
26627737 |
RPE1 |
viability after 15 days |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.027173641001710117 |
[705] |
[202,203] |
0 |
hSpCas9 |
negative selection |
1312609 |
11025519 |
11025542 |
3 |
- |
26627737 |
RPE1 |
viability after 15 days |
GAGGATGCCCTCCTTGGCCCCGG |
SLC6A1 |
ENSG00000157103 |
8.341296186209874 |
[0] |
[77,104] |
9 |
hSpCas9 |
negative selection |
1312610 |
11020202 |
11020225 |
3 |
+ |
26627737 |
RPE1 |
viability after 18 days |
TGTCCTTGCAGACACTGCCGTGG |
SLC6A1 |
ENSG00000157103 |
-0.7396055794878613 |
[572] |
[124,57] |
-4 |
hSpCas9 |
negative selection |
1394923 |
11022368 |
11022391 |
3 |
+ |
26627737 |
RPE1 |
viability after 18 days |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
-0.5148256822523161 |
[705] |
[157,106] |
-3 |
hSpCas9 |
negative selection |
1394924 |
11025519 |
11025542 |
3 |
- |
26627737 |
RPE1 |
viability after 18 days |
GAGGATGCCCTCCTTGGCCCCGG |
SLC6A1 |
ENSG00000157103 |
7.6780966788167095 |
[0] |
[33,77] |
9 |
hSpCas9 |
negative selection |
1394925 |
11020202 |
11020225 |
3 |
+ |
26627737 |
HeLa |
viability after 8 days |
TGTCCTTGCAGACACTGCCGTGG |
SLC6A1 |
ENSG00000157103 |
1.3493720753179343 |
[97] |
[160,30,142] |
8 |
hSpCas9 |
negative selection |
1477238 |
11022368 |
11022391 |
3 |
+ |
26627737 |
HeLa |
viability after 8 days |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
-0.14208276352586796 |
[419] |
[189,98,209] |
-1 |
hSpCas9 |
negative selection |
1477239 |
11025519 |
11025542 |
3 |
- |
26627737 |
HeLa |
viability after 8 days |
GAGGATGCCCTCCTTGGCCCCGG |
SLC6A1 |
ENSG00000157103 |
-0.07128798362399125 |
[159] |
[59,64,71] |
0 |
hSpCas9 |
negative selection |
1477240 |
11020202 |
11020225 |
3 |
+ |
26627737 |
HeLa |
viability after 12 days |
TGTCCTTGCAGACACTGCCGTGG |
SLC6A1 |
ENSG00000157103 |
1.766149348818505 |
[97] |
[209,112,94] |
9 |
hSpCas9 |
negative selection |
1559553 |
11022368 |
11022391 |
3 |
+ |
26627737 |
HeLa |
viability after 12 days |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.1274569189840237 |
[419] |
[30,266,257] |
1 |
hSpCas9 |
negative selection |
1559554 |
11025519 |
11025542 |
3 |
- |
26627737 |
HeLa |
viability after 12 days |
GAGGATGCCCTCCTTGGCCCCGG |
SLC6A1 |
ENSG00000157103 |
-1.931369531277906 |
[159] |
[8,33,6] |
-9 |
hSpCas9 |
negative selection |
1559555 |
11020202 |
11020225 |
3 |
+ |
26627737 |
HeLa |
viability after 15 days |
TGTCCTTGCAGACACTGCCGTGG |
SLC6A1 |
ENSG00000157103 |
1.5192122543550837 |
[97] |
[153,92,93] |
8 |
hSpCas9 |
negative selection |
1641868 |
11022368 |
11022391 |
3 |
+ |
26627737 |
HeLa |
viability after 15 days |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.45761272105161727 |
[419] |
[152,262,293] |
4 |
hSpCas9 |
negative selection |
1641869 |
11025519 |
11025542 |
3 |
- |
26627737 |
HeLa |
viability after 15 days |
GAGGATGCCCTCCTTGGCCCCGG |
SLC6A1 |
ENSG00000157103 |
-0.16597931952414458 |
[159] |
[56,0,120] |
-1 |
hSpCas9 |
negative selection |
1641870 |
11020202 |
11020225 |
3 |
+ |
26627737 |
HeLa |
viability after 18 days |
TGTCCTTGCAGACACTGCCGTGG |
SLC6A1 |
ENSG00000157103 |
1.494787970148062 |
[97] |
[101,73,93] |
8 |
hSpCas9 |
negative selection |
1724183 |
11022368 |
11022391 |
3 |
+ |
26627737 |
HeLa |
viability after 18 days |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.45040985693277974 |
[419] |
[100,216,293] |
4 |
hSpCas9 |
negative selection |
1724184 |
11025519 |
11025542 |
3 |
- |
26627737 |
HeLa |
viability after 18 days |
GAGGATGCCCTCCTTGGCCCCGG |
SLC6A1 |
ENSG00000157103 |
-0.12949393964202005 |
[159] |
[40,0,120] |
-1 |
hSpCas9 |
negative selection |
1724185 |
11020202 |
11020225 |
3 |
+ |
26627737 |
HCT116 |
viability after 6 days |
TGTCCTTGCAGACACTGCCGTGG |
SLC6A1 |
ENSG00000157103 |
0.2670584287334582 |
[273] |
[114,16] |
1 |
hSpCas9 |
negative selection |
1806498 |
11022368 |
11022391 |
3 |
+ |
26627737 |
HCT116 |
viability after 6 days |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.48333817221937286 |
[553] |
[133,114] |
2 |
hSpCas9 |
negative selection |
1806499 |
11025519 |
11025542 |
3 |
- |
26627737 |
HCT116 |
viability after 6 days |
GAGGATGCCCTCCTTGGCCCCGG |
SLC6A1 |
ENSG00000157103 |
-1.208483992761435 |
[146] |
[9,9] |
-6 |
hSpCas9 |
negative selection |
1806500 |
11020202 |
11020225 |
3 |
+ |
26627737 |
HCT116 |
viability after 8 days |
TGTCCTTGCAGACACTGCCGTGG |
SLC6A1 |
ENSG00000157103 |
0.01826989530971379 |
[166] |
[78,79,119] |
0 |
hSpCas9 |
negative selection |
1888813 |
11022368 |
11022391 |
3 |
+ |
26627737 |
HCT116 |
viability after 8 days |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.1745995790734298 |
[224] |
[166,172,80] |
2 |
hSpCas9 |
negative selection |
1888814 |
11025519 |
11025542 |
3 |
- |
26627737 |
HCT116 |
viability after 8 days |
GAGGATGCCCTCCTTGGCCCCGG |
SLC6A1 |
ENSG00000157103 |
-0.8336524146925498 |
[158] |
[51,84,10] |
-8 |
hSpCas9 |
negative selection |
1888815 |
11020202 |
11020225 |
3 |
+ |
26627737 |
HCT116 |
viability after 9 days |
TGTCCTTGCAGACACTGCCGTGG |
SLC6A1 |
ENSG00000157103 |
-1.7798336697304065 |
[273] |
[46,0] |
-8 |
hSpCas9 |
negative selection |
1971128 |
11022368 |
11022391 |
3 |
+ |
26627737 |
HCT116 |
viability after 9 days |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
-0.6037567692989562 |
[553] |
[198,16] |
-4 |
hSpCas9 |
negative selection |
1971129 |
11025519 |
11025542 |
3 |
- |
26627737 |
HCT116 |
viability after 9 days |
GAGGATGCCCTCCTTGGCCCCGG |
SLC6A1 |
ENSG00000157103 |
0.04885333488235721 |
[146] |
[10,63] |
0 |
hSpCas9 |
negative selection |
1971130 |
11020202 |
11020225 |
3 |
+ |
26627737 |
HCT116 |
viability after 12 days |
TGTCCTTGCAGACACTGCCGTGG |
SLC6A1 |
ENSG00000157103 |
-0.04019002340379729 |
[166] |
[37,158,64] |
0 |
hSpCas9 |
negative selection |
2053443 |
11022368 |
11022391 |
3 |
+ |
26627737 |
HCT116 |
viability after 12 days |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.26083294945086866 |
[224] |
[127,90,205] |
2 |
hSpCas9 |
negative selection |
2053444 |
11025519 |
11025542 |
3 |
- |
26627737 |
HCT116 |
viability after 12 days |
GAGGATGCCCTCCTTGGCCCCGG |
SLC6A1 |
ENSG00000157103 |
-0.16664039881477433 |
[158] |
[106,54,57] |
-2 |
hSpCas9 |
negative selection |
2053445 |
11020202 |
11020225 |
3 |
+ |
26627737 |
HCT116 |
viability after 15 days |
TGTCCTTGCAGACACTGCCGTGG |
SLC6A1 |
ENSG00000157103 |
-0.6212125934304362 |
[166] |
[77,51,58] |
-6 |
hSpCas9 |
negative selection |
2135758 |
11022368 |
11022391 |
3 |
+ |
26627737 |
HCT116 |
viability after 15 days |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.30165216354743407 |
[224] |
[210,105,166] |
3 |
hSpCas9 |
negative selection |
2135759 |
11025519 |
11025542 |
3 |
- |
26627737 |
HCT116 |
viability after 15 days |
GAGGATGCCCTCCTTGGCCCCGG |
SLC6A1 |
ENSG00000157103 |
-1.26971106737127 |
[158] |
[61,53,0] |
-8 |
hSpCas9 |
negative selection |
2135760 |
11020202 |
11020225 |
3 |
+ |
26627737 |
HCT116 |
viability after 18 days |
TGTCCTTGCAGACACTGCCGTGG |
SLC6A1 |
ENSG00000157103 |
-0.5556888344438065 |
[166] |
[20,66,76] |
-5 |
hSpCas9 |
negative selection |
2218073 |
11022368 |
11022391 |
3 |
+ |
26627737 |
HCT116 |
viability after 18 days |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.6373414252899527 |
[224] |
[145,140,224] |
5 |
hSpCas9 |
negative selection |
2218074 |
11025519 |
11025542 |
3 |
- |
26627737 |
HCT116 |
viability after 18 days |
GAGGATGCCCTCCTTGGCCCCGG |
SLC6A1 |
ENSG00000157103 |
-0.5710800296291177 |
[158] |
[123,23,6] |
-5 |
hSpCas9 |
negative selection |
2218075 |
11029701 |
11029724 |
3 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
GCACTTTGGGAGGCAGAGGCCGG |
SLC6A1 |
ENSG00000157103 |
1.3055372672802243 |
[104,28] |
[48,21] |
5 |
dCas9-VP64 |
positive selection |
2470096 |
11029701 |
11029724 |
3 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
GCACTTTGGGAGGCAGAGGCCGG |
SLC6A1 |
ENSG00000157103 |
4.207282944889167 |
[182,227] |
[2502,59] |
9 |
dCas9-VP64 |
positive selection |
2565351 |
11020254 |
11020277 |
3 |
- |
27453484 |
HT29 |
resistance to T3SS1-dependent cytotoxicity |
TGCTGTAGTTGGAGAAGCAGCGG |
SLC6A1 |
ENSG00000157103 |
-0.3630511373875923 |
[2,2] |
[2,0] |
-5 |
hSpCas9 |
positive selection |
3021666 |
11020254 |
11020277 |
3 |
- |
27453484 |
HT29 |
resistance to T3SS2-dependent cytotoxicity |
TGCTGTAGTTGGAGAAGCAGCGG |
SLC6A1 |
ENSG00000157103 |
-0.2624103183833295 |
[2,2] |
[2,0] |
-4 |
hSpCas9 |
positive selection |
3089524 |
11020287 |
11020310 |
|
+ |
24336571 |
A375 |
resistance to PLX after 7 days |
TACCAACATGACCAGCGCTGTGG |
SLC6A1 |
ENSG00000157103 |
-0.34208688288323 |
[10,8] |
[6,8] |
-8 |
hSpCas9 |
positive selection |
3145700 |
11020287 |
11020310 |
|
+ |
24336571 |
A375 |
resistance to PLX after 14 days |
TACCAACATGACCAGCGCTGTGG |
SLC6A1 |
ENSG00000157103 |
-1.1064982238555483 |
[13,12] |
[2,1] |
-9 |
hSpCas9 |
positive selection |
3203493 |
11020287 |
11020310 |
|
+ |
24336571 |
A375 |
viability after 7 days |
TACCAACATGACCAGCGCTGTGG |
SLC6A1 |
ENSG00000157103 |
0.26711919858193506 |
[8] |
[10,8] |
4 |
hSpCas9 |
negative selection |
3261286 |
11020287 |
11020310 |
|
+ |
24336571 |
A375 |
viability after 14 days |
TACCAACATGACCAGCGCTGTGG |
SLC6A1 |
ENSG00000157103 |
0.7268051486019176 |
[8] |
[13,12] |
8 |
hSpCas9 |
negative selection |
3319079 |
11020265 |
11020288 |
3 |
- |
27383988 |
293T |
resistance to West Nile virus (flavivirus) |
AGTGTTGACCATGCTGTAGTTGG |
SLC6A1 |
ENSG00000157103 |
-1.4431135066952572 |
[415,415] |
[0,0] |
-8 |
hSpCas9 |
positive selection |
3393493 |
11020254 |
11020277 |
3 |
- |
26780180 |
HT29 |
viability (Avana library 4 designs) |
TGCTGTAGTTGGAGAAGCAGCGG |
SLC6A1 |
ENSG00000157103 |
1.15542416563884 |
[] |
[] |
4 |
hSpCas9 |
negative selection |
3460214 |
11020254 |
11020277 |
3 |
- |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
TGCTGTAGTTGGAGAAGCAGCGG |
SLC6A1 |
ENSG00000157103 |
2.56204158578271 |
[] |
[] |
4 |
hSpCas9 |
negative selection |
3560502 |
11020257 |
11020280 |
3 |
+ |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
CTGCTTCTCCAACTACAGCATGG |
SLC6A1 |
ENSG00000157103 |
1.60043426213088 |
[] |
[] |
2 |
hSpCas9 |
negative selection |
3560503 |
11020254 |
11020277 |
3 |
- |
26780180 |
A375 |
viability (Avana lentiGuide) |
TGCTGTAGTTGGAGAAGCAGCGG |
SLC6A1 |
ENSG00000157103 |
-3.4305582587356 |
[] |
[] |
-6 |
hSpCas9 |
negative selection |
3669161 |
11020257 |
11020280 |
3 |
+ |
26780180 |
A375 |
viability (Avana lentiGuide) |
CTGCTTCTCCAACTACAGCATGG |
SLC6A1 |
ENSG00000157103 |
0.329606868262947 |
[] |
[] |
0 |
hSpCas9 |
negative selection |
3669162 |
11020254 |
11020277 |
3 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
TGCTGTAGTTGGAGAAGCAGCGG |
SLC6A1 |
ENSG00000157103 |
0.07678187622405658 |
[4] |
[3,4] |
2 |
hSpCas9 |
positive selection |
3777768 |
11020257 |
11020280 |
3 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
CTGCTTCTCCAACTACAGCATGG |
SLC6A1 |
ENSG00000157103 |
-0.034989921088947135 |
[4] |
[4,4] |
0 |
hSpCas9 |
positive selection |
3777769 |
11020254 |
11020277 |
3 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
TGCTGTAGTTGGAGAAGCAGCGG |
SLC6A1 |
ENSG00000157103 |
0.374176491427868 |
[3] |
[2,4] |
9 |
hSpCas9 |
positive selection |
3886375 |
11020257 |
11020280 |
3 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
CTGCTTCTCCAACTACAGCATGG |
SLC6A1 |
ENSG00000157103 |
0.17401169606957656 |
[5] |
[3,6] |
4 |
hSpCas9 |
positive selection |
3886376 |
11022373 |
11022396 |
3 |
- |
26780180 |
A375 |
viability |
AGTGGCCAGCGGATCTGACCTGG |
SLC6A1 |
ENSG00000157103 |
0.788632226765625 |
[] |
[] |
3 |
hSpCas9 |
negative selection |
3996480 |
11020265 |
11020288 |
3 |
- |
26780180 |
A375 |
viability |
AGTGTTGACCATGCTGTAGTTGG |
SLC6A1 |
ENSG00000157103 |
0.585932462409528 |
[] |
[] |
1 |
hSpCas9 |
negative selection |
3996481 |
11022368 |
11022391 |
3 |
+ |
26780180 |
A375 |
viability |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.951948906975308 |
[] |
[] |
4 |
hSpCas9 |
negative selection |
3996482 |
11020287 |
11020310 |
3 |
+ |
26780180 |
A375 |
viability |
TACCAACATGACCAGCGCTGTGG |
SLC6A1 |
ENSG00000157103 |
0.827579841759642 |
[] |
[] |
3 |
hSpCas9 |
negative selection |
3996483 |
11022373 |
11022396 |
3 |
- |
26780180 |
HT29 |
viability (GeCKOv2 library) |
AGTGGCCAGCGGATCTGACCTGG |
SLC6A1 |
ENSG00000157103 |
0.859334216752697 |
[] |
[] |
3 |
hSpCas9 |
negative selection |
4104446 |
11020265 |
11020288 |
3 |
- |
26780180 |
HT29 |
viability (GeCKOv2 library) |
AGTGTTGACCATGCTGTAGTTGG |
SLC6A1 |
ENSG00000157103 |
0.783263960905636 |
[] |
[] |
3 |
hSpCas9 |
negative selection |
4104447 |
11022368 |
11022391 |
3 |
+ |
26780180 |
HT29 |
viability (GeCKOv2 library) |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
1.38925742073887 |
[] |
[] |
7 |
hSpCas9 |
negative selection |
4104448 |
11020287 |
11020310 |
3 |
+ |
26780180 |
HT29 |
viability (GeCKOv2 library) |
TACCAACATGACCAGCGCTGTGG |
SLC6A1 |
ENSG00000157103 |
1.13338572204937 |
[] |
[] |
5 |
hSpCas9 |
negative selection |
4104449 |
11020287 |
11020310 |
3 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiCRISPRv1) |
TACCAACATGACCAGCGCTGTGG |
SLC6A1 |
ENSG00000157103 |
-0.6368358853279856 |
[3] |
[1,1] |
-9 |
hSpCas9 |
positive selection |
4171740 |
11020287 |
11020310 |
3 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiGuide) |
TACCAACATGACCAGCGCTGTGG |
SLC6A1 |
ENSG00000157103 |
1.5029462021471778 |
[3] |
[3,4,2,5] |
9 |
hSpCas9 |
positive selection |
4235762 |
11022368 |
11022391 |
3 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
-0.24916525331479045 |
[1] |
[1,0] |
-5 |
hSpCas9 |
positive selection |
4298918 |
11020287 |
11020310 |
3 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
TACCAACATGACCAGCGCTGTGG |
SLC6A1 |
ENSG00000157103 |
0.3424212200928463 |
[2] |
[2,2] |
7 |
hSpCas9 |
positive selection |
4298919 |
11022373 |
11022396 |
3 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
AGTGGCCAGCGGATCTGACCTGG |
SLC6A1 |
ENSG00000157103 |
0.20104379065230482 |
[1] |
[2,1] |
4 |
hSpCas9 |
positive selection |
4298920 |
11020265 |
11020288 |
3 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
AGTGTTGACCATGCTGTAGTTGG |
SLC6A1 |
ENSG00000157103 |
0.31772763857339764 |
[3] |
[4,3] |
6 |
hSpCas9 |
positive selection |
4363174 |
11022332 |
11022354 |
3 |
- |
27760321 |
OCIAML3 |
viability |
ATCTGATGCATGTTGCGCCTGG |
SLC6A1 |
ENSG00000157103 |
-0.19544147237398113 |
[868,835] |
[462,739] |
-2 |
hSpCas9 |
negative selection |
4440759 |
11022369 |
11022391 |
3 |
+ |
27760321 |
OCIAML3 |
viability |
TAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.0258459383987229 |
[652,525] |
[372,588] |
0 |
hSpCas9 |
negative selection |
4440760 |
11025493 |
11025515 |
3 |
- |
27760321 |
OCIAML3 |
viability |
CGTCACTCCACGGAAGAACAGG |
SLC6A1 |
ENSG00000157103 |
0.2978304068104918 |
[701,548] |
[595,598] |
3 |
hSpCas9 |
negative selection |
4440761 |
11022332 |
11022354 |
3 |
- |
27760321 |
OCIAML2 |
viability |
ATCTGATGCATGTTGCGCCTGG |
SLC6A1 |
ENSG00000157103 |
0.1357716131162029 |
[868,835] |
[657,891] |
1 |
hSpCas9 |
negative selection |
4524222 |
11022369 |
11022391 |
3 |
+ |
27760321 |
OCIAML2 |
viability |
TAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.24348216797984562 |
[652,525] |
[437,723] |
3 |
hSpCas9 |
negative selection |
4524223 |
11025493 |
11025515 |
3 |
- |
27760321 |
OCIAML2 |
viability |
CGTCACTCCACGGAAGAACAGG |
SLC6A1 |
ENSG00000157103 |
0.1012866203186551 |
[701,548] |
[476,620] |
1 |
hSpCas9 |
negative selection |
4524224 |
11022332 |
11022354 |
3 |
- |
27760321 |
MV411 |
viability |
ATCTGATGCATGTTGCGCCTGG |
SLC6A1 |
ENSG00000157103 |
-0.37796110326237164 |
[868,835] |
[483,357] |
-3 |
hSpCas9 |
negative selection |
4607685 |
11022369 |
11022391 |
3 |
+ |
27760321 |
MV411 |
viability |
TAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
-0.6116798220943869 |
[652,525] |
[213,311] |
-4 |
hSpCas9 |
negative selection |
4607686 |
11025493 |
11025515 |
3 |
- |
27760321 |
MV411 |
viability |
CGTCACTCCACGGAAGAACAGG |
SLC6A1 |
ENSG00000157103 |
1.2122921194568925 |
[701,548] |
[1124,686] |
8 |
hSpCas9 |
negative selection |
4607687 |
11022332 |
11022354 |
3 |
- |
27760321 |
HL60 |
viability |
ATCTGATGCATGTTGCGCCTGG |
SLC6A1 |
ENSG00000157103 |
-0.154447381000973 |
[868,835] |
[750,494] |
-2 |
hSpCas9 |
negative selection |
4691148 |
11022369 |
11022391 |
3 |
+ |
27760321 |
HL60 |
viability |
TAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
-0.05084806560768984 |
[652,525] |
[504,416] |
0 |
hSpCas9 |
negative selection |
4691149 |
11025493 |
11025515 |
3 |
- |
27760321 |
HL60 |
viability |
CGTCACTCCACGGAAGAACAGG |
SLC6A1 |
ENSG00000157103 |
-0.3542226184365095 |
[701,548] |
[380,413] |
-4 |
hSpCas9 |
negative selection |
4691150 |
11022332 |
11022354 |
3 |
- |
27760321 |
HT1080 |
viability |
ATCTGATGCATGTTGCGCCTGG |
SLC6A1 |
ENSG00000157103 |
-0.36033016680442187 |
[835,652] |
[210,252] |
-2 |
hSpCas9 |
negative selection |
4774611 |
11022369 |
11022391 |
3 |
+ |
27760321 |
HT1080 |
viability |
TAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
1.598022113371081 |
[525,410] |
[449,690] |
8 |
hSpCas9 |
negative selection |
4774612 |
11025493 |
11025515 |
3 |
- |
27760321 |
HT1080 |
viability |
CGTCACTCCACGGAAGAACAGG |
SLC6A1 |
ENSG00000157103 |
-0.19558710946484123 |
[548,428] |
[140,201] |
-1 |
hSpCas9 |
negative selection |
4774613 |
11022332 |
11022354 |
3 |
- |
27760321 |
HT29 |
viability after 7 days |
ATCTGATGCATGTTGCGCCTGG |
SLC6A1 |
ENSG00000157103 |
-0.45985951559320404 |
[835,652] |
[538,493,1020] |
-6 |
hSpCas9 |
negative selection |
4858074 |
11022369 |
11022391 |
3 |
+ |
27760321 |
HT29 |
viability after 7 days |
TAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.10284109285042375 |
[525,410] |
[727,469,749] |
1 |
hSpCas9 |
negative selection |
4858075 |
11025493 |
11025515 |
3 |
- |
27760321 |
HT29 |
viability after 7 days |
CGTCACTCCACGGAAGAACAGG |
SLC6A1 |
ENSG00000157103 |
-0.2787145741700995 |
[548,428] |
[546,484,525] |
-4 |
hSpCas9 |
negative selection |
4858076 |
11022332 |
11022354 |
3 |
- |
27760321 |
HT29 |
viability after 25 days |
ATCTGATGCATGTTGCGCCTGG |
SLC6A1 |
ENSG00000157103 |
-0.1330117235777104 |
[835,652] |
[844,720,753] |
-1 |
hSpCas9 |
negative selection |
4941537 |
11022369 |
11022391 |
3 |
+ |
27760321 |
HT29 |
viability after 25 days |
TAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.31047937351418514 |
[525,410] |
[472,797,739] |
3 |
hSpCas9 |
negative selection |
4941538 |
11025493 |
11025515 |
3 |
- |
27760321 |
HT29 |
viability after 25 days |
CGTCACTCCACGGAAGAACAGG |
SLC6A1 |
ENSG00000157103 |
0.28871606319712234 |
[548,428] |
[699,645,701] |
3 |
hSpCas9 |
negative selection |
4941539 |
11022332 |
11022354 |
3 |
- |
27760321 |
HT29 |
viability after 22 days |
ATCTGATGCATGTTGCGCCTGG |
SLC6A1 |
ENSG00000157103 |
-0.3900886210145432 |
[835,652] |
[671,637,659] |
-4 |
hSpCas9 |
negative selection |
5025000 |
11022369 |
11022391 |
3 |
+ |
27760321 |
HT29 |
viability after 22 days |
TAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.32429964070702105 |
[525,410] |
[519,711,807] |
3 |
hSpCas9 |
negative selection |
5025001 |
11025493 |
11025515 |
3 |
- |
27760321 |
HT29 |
viability after 22 days |
CGTCACTCCACGGAAGAACAGG |
SLC6A1 |
ENSG00000157103 |
0.3151735852583894 |
[548,428] |
[749,537,821] |
3 |
hSpCas9 |
negative selection |
5025002 |
11022332 |
11022354 |
3 |
- |
27760321 |
HT29 |
viability after 19 days |
ATCTGATGCATGTTGCGCCTGG |
SLC6A1 |
ENSG00000157103 |
0.014603496465991572 |
[835,652] |
[883,933,767] |
0 |
hSpCas9 |
negative selection |
5108463 |
11022369 |
11022391 |
3 |
+ |
27760321 |
HT29 |
viability after 19 days |
TAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
-0.19777046574067253 |
[525,410] |
[565,521,328] |
-2 |
hSpCas9 |
negative selection |
5108464 |
11025493 |
11025515 |
3 |
- |
27760321 |
HT29 |
viability after 19 days |
CGTCACTCCACGGAAGAACAGG |
SLC6A1 |
ENSG00000157103 |
0.4622298399591162 |
[548,428] |
[566,1172,557] |
4 |
hSpCas9 |
negative selection |
5108465 |
11022332 |
11022354 |
3 |
- |
27760321 |
HT29 |
viability after 16 days |
ATCTGATGCATGTTGCGCCTGG |
SLC6A1 |
ENSG00000157103 |
-0.951164079123428 |
[835,652] |
[598,404,304] |
-7 |
hSpCas9 |
negative selection |
5191926 |
11022369 |
11022391 |
3 |
+ |
27760321 |
HT29 |
viability after 16 days |
TAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.2691946130919965 |
[525,410] |
[583,806,494] |
3 |
hSpCas9 |
negative selection |
5191927 |
11025493 |
11025515 |
3 |
- |
27760321 |
HT29 |
viability after 16 days |
CGTCACTCCACGGAAGAACAGG |
SLC6A1 |
ENSG00000157103 |
0.09901788387162774 |
[548,428] |
[844,447,492] |
1 |
hSpCas9 |
negative selection |
5191928 |
11022332 |
11022354 |
3 |
- |
27760321 |
HT29 |
viability after 13 days |
ATCTGATGCATGTTGCGCCTGG |
SLC6A1 |
ENSG00000157103 |
-0.15844145496563855 |
[835,652] |
[769,869,686] |
-2 |
hSpCas9 |
negative selection |
5275389 |
11022369 |
11022391 |
3 |
+ |
27760321 |
HT29 |
viability after 13 days |
TAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.1546073446767698 |
[525,410] |
[469,700,641] |
2 |
hSpCas9 |
negative selection |
5275390 |
11025493 |
11025515 |
3 |
- |
27760321 |
HT29 |
viability after 13 days |
CGTCACTCCACGGAAGAACAGG |
SLC6A1 |
ENSG00000157103 |
0.26629942591043804 |
[548,428] |
[877,665,512] |
3 |
hSpCas9 |
negative selection |
5275391 |
11022332 |
11022354 |
3 |
- |
27760321 |
HT29 |
viability after 10 days |
ATCTGATGCATGTTGCGCCTGG |
SLC6A1 |
ENSG00000157103 |
-0.22953432268142426 |
[835,652] |
[577,939,862] |
-3 |
hSpCas9 |
negative selection |
5358852 |
11022369 |
11022391 |
3 |
+ |
27760321 |
HT29 |
viability after 10 days |
TAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.31441088687986557 |
[525,410] |
[668,408,1086] |
4 |
hSpCas9 |
negative selection |
5358853 |
11025493 |
11025515 |
3 |
- |
27760321 |
HT29 |
viability after 10 days |
CGTCACTCCACGGAAGAACAGG |
SLC6A1 |
ENSG00000157103 |
0.18122216523423879 |
[548,428] |
[879,691,508] |
2 |
hSpCas9 |
negative selection |
5358854 |
11022332 |
11022354 |
3 |
- |
27760321 |
MOLM13 |
viability |
ATCTGATGCATGTTGCGCCTGG |
SLC6A1 |
ENSG00000157103 |
0.6921103195530506 |
[868,835] |
[698,845] |
5 |
hSpCas9 |
negative selection |
5442315 |
11022369 |
11022391 |
3 |
+ |
27760321 |
MOLM13 |
viability |
TAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
-0.5182362601993977 |
[652,525] |
[251,212] |
-3 |
hSpCas9 |
negative selection |
5442316 |
11025493 |
11025515 |
3 |
- |
27760321 |
MOLM13 |
viability |
CGTCACTCCACGGAAGAACAGG |
SLC6A1 |
ENSG00000157103 |
0.4398280163219769 |
[701,548] |
[475,474] |
3 |
hSpCas9 |
negative selection |
5442317 |
10993122 |
10993145 |
3 |
+ |
27661255 |
K562 |
viability |
GCCCAGGCCATCCGTCCCCTGGG |
SLC6A1 |
ENSG00000157103 |
0.2903200042413774 |
[283,181] |
[223,233] |
8 |
dCas9-KRAB |
negative selection |
5512461 |
10993208 |
10993231 |
3 |
+ |
27661255 |
K562 |
viability |
GCCCCACTGGCCCCGCAAGTTGG |
SLC6A1 |
ENSG00000157103 |
0.10518752996317082 |
[359,402] |
[338,316] |
3 |
dCas9-KRAB |
negative selection |
5512462 |
11022368 |
11022391 |
3 |
+ |
27260156 |
BXPC3 |
viability |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
-0.2052874072362767 |
[160] |
[154,168,117,136] |
-5 |
hSpCas9 |
negative selection |
5571378 |
11020287 |
11020310 |
3 |
+ |
27260156 |
BXPC3 |
viability |
TACCAACATGACCAGCGCTGTGG |
SLC6A1 |
ENSG00000157103 |
-0.031516503351454284 |
[298] |
[230,331,309,361] |
0 |
hSpCas9 |
negative selection |
5571379 |
11022373 |
11022396 |
3 |
- |
27260156 |
BXPC3 |
viability |
AGTGGCCAGCGGATCTGACCTGG |
SLC6A1 |
ENSG00000157103 |
0.2286426527376142 |
[153] |
[134,215,202,205] |
5 |
hSpCas9 |
negative selection |
5571380 |
11020265 |
11020288 |
3 |
- |
27260156 |
BXPC3 |
viability |
AGTGTTGACCATGCTGTAGTTGG |
SLC6A1 |
ENSG00000157103 |
0.1612549076486387 |
[844] |
[887,894,1112,1078] |
3 |
hSpCas9 |
negative selection |
5635634 |
11022368 |
11022391 |
3 |
+ |
27260156 |
A673 |
viability |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
-0.2614514780203292 |
[160] |
[183,158,166,135] |
-6 |
hSpCas9 |
negative selection |
5692629 |
11020287 |
11020310 |
3 |
+ |
27260156 |
A673 |
viability |
TACCAACATGACCAGCGCTGTGG |
SLC6A1 |
ENSG00000157103 |
0.11706188772350823 |
[298] |
[379,390,416,365] |
3 |
hSpCas9 |
negative selection |
5692630 |
11022373 |
11022396 |
3 |
- |
27260156 |
A673 |
viability |
AGTGGCCAGCGGATCTGACCTGG |
SLC6A1 |
ENSG00000157103 |
0.5755376793122757 |
[153] |
[346,209,331,218] |
9 |
hSpCas9 |
negative selection |
5692631 |
11020265 |
11020288 |
3 |
- |
27260156 |
A673 |
viability |
AGTGTTGACCATGCTGTAGTTGG |
SLC6A1 |
ENSG00000157103 |
0.18261111706088284 |
[844] |
[1243,1042,1193,1134] |
4 |
hSpCas9 |
negative selection |
5756885 |
11022368 |
11022391 |
3 |
+ |
27260156 |
A375 |
viability |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
-0.2942956578132718 |
[160] |
[145,105,143,203] |
-4 |
hSpCas9 |
negative selection |
5813880 |
11020287 |
11020310 |
3 |
+ |
27260156 |
A375 |
viability |
TACCAACATGACCAGCGCTGTGG |
SLC6A1 |
ENSG00000157103 |
0.006668550196303857 |
[298] |
[290,441,207,459] |
0 |
hSpCas9 |
negative selection |
5813881 |
11022373 |
11022396 |
3 |
- |
27260156 |
A375 |
viability |
AGTGGCCAGCGGATCTGACCTGG |
SLC6A1 |
ENSG00000157103 |
0.7598855619953783 |
[153] |
[264,313,175,445] |
9 |
hSpCas9 |
negative selection |
5813882 |
11020265 |
11020288 |
3 |
- |
27260156 |
A375 |
viability |
AGTGTTGACCATGCTGTAGTTGG |
SLC6A1 |
ENSG00000157103 |
0.25252395921931736 |
[844] |
[1312,1178,1319,918] |
3 |
hSpCas9 |
negative selection |
5878136 |
11022368 |
11022391 |
3 |
+ |
27260156 |
COLO741 |
viability |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
-0.08692776004229064 |
[160] |
[216,233,135] |
-2 |
hSpCas9 |
negative selection |
5935131 |
11020287 |
11020310 |
3 |
+ |
27260156 |
COLO741 |
viability |
TACCAACATGACCAGCGCTGTGG |
SLC6A1 |
ENSG00000157103 |
-0.1418571869397791 |
[298] |
[486,318,250] |
-3 |
hSpCas9 |
negative selection |
5935132 |
11022373 |
11022396 |
3 |
- |
27260156 |
COLO741 |
viability |
AGTGGCCAGCGGATCTGACCTGG |
SLC6A1 |
ENSG00000157103 |
0.561051941835073 |
[153] |
[287,290,290] |
9 |
hSpCas9 |
negative selection |
5935133 |
11020265 |
11020288 |
3 |
- |
27260156 |
COLO741 |
viability |
AGTGTTGACCATGCTGTAGTTGG |
SLC6A1 |
ENSG00000157103 |
0.2024167548725997 |
[844] |
[1392,1469,899] |
4 |
hSpCas9 |
negative selection |
5999387 |
11022368 |
11022391 |
3 |
+ |
27260156 |
CAL120 |
viability |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.302090607440076 |
[160] |
[201,275,255] |
4 |
hSpCas9 |
negative selection |
6056382 |
11020287 |
11020310 |
3 |
+ |
27260156 |
CAL120 |
viability |
TACCAACATGACCAGCGCTGTGG |
SLC6A1 |
ENSG00000157103 |
-0.15548860050701951 |
[298] |
[455,320,244] |
-2 |
hSpCas9 |
negative selection |
6056383 |
11022373 |
11022396 |
3 |
- |
27260156 |
CAL120 |
viability |
AGTGGCCAGCGGATCTGACCTGG |
SLC6A1 |
ENSG00000157103 |
0.10271448234569402 |
[153] |
[194,179,239] |
1 |
hSpCas9 |
negative selection |
6056384 |
11020265 |
11020288 |
3 |
- |
27260156 |
CAL120 |
viability |
AGTGTTGACCATGCTGTAGTTGG |
SLC6A1 |
ENSG00000157103 |
0.21464982027598656 |
[844] |
[1322,1269,1084] |
3 |
hSpCas9 |
negative selection |
6120638 |
11022368 |
11022391 |
3 |
+ |
27260156 |
CADOES1 |
viability |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.2683793912172834 |
[160] |
[303,171,143,97] |
4 |
hSpCas9 |
negative selection |
6177633 |
11020287 |
11020310 |
3 |
+ |
27260156 |
CADOES1 |
viability |
TACCAACATGACCAGCGCTGTGG |
SLC6A1 |
ENSG00000157103 |
-0.07420214121323265 |
[298] |
[220,311,177,348] |
-1 |
hSpCas9 |
negative selection |
6177634 |
11022373 |
11022396 |
3 |
- |
27260156 |
CADOES1 |
viability |
AGTGGCCAGCGGATCTGACCTGG |
SLC6A1 |
ENSG00000157103 |
0.8462761953185477 |
[153] |
[88,256,258,431] |
9 |
hSpCas9 |
negative selection |
6177635 |
11020265 |
11020288 |
3 |
- |
27260156 |
CADOES1 |
viability |
AGTGTTGACCATGCTGTAGTTGG |
SLC6A1 |
ENSG00000157103 |
0.14378653512179718 |
[844] |
[638,902,799,1141] |
2 |
hSpCas9 |
negative selection |
6241889 |
11022368 |
11022391 |
3 |
+ |
27260156 |
EWS502 |
viability |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.8006577810840174 |
[160] |
[225,264,482,219] |
9 |
hSpCas9 |
negative selection |
6298884 |
11020287 |
11020310 |
3 |
+ |
27260156 |
EWS502 |
viability |
TACCAACATGACCAGCGCTGTGG |
SLC6A1 |
ENSG00000157103 |
0.15320163869357978 |
[298] |
[327,197,591,297] |
2 |
hSpCas9 |
negative selection |
6298885 |
11022373 |
11022396 |
3 |
- |
27260156 |
EWS502 |
viability |
AGTGGCCAGCGGATCTGACCTGG |
SLC6A1 |
ENSG00000157103 |
0.728014145668922 |
[153] |
[263,228,379,205] |
9 |
hSpCas9 |
negative selection |
6298886 |
11020265 |
11020288 |
3 |
- |
27260156 |
EWS502 |
viability |
AGTGTTGACCATGCTGTAGTTGG |
SLC6A1 |
ENSG00000157103 |
0.3102104875923415 |
[844] |
[1018,1070,992,1381] |
5 |
hSpCas9 |
negative selection |
6363140 |
11022368 |
11022391 |
3 |
+ |
27260156 |
EW8 |
viability |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.570107031965409 |
[160] |
[211,155,121,297] |
8 |
hSpCas9 |
negative selection |
6420135 |
11020287 |
11020310 |
3 |
+ |
27260156 |
EW8 |
viability |
TACCAACATGACCAGCGCTGTGG |
SLC6A1 |
ENSG00000157103 |
0.02173312281500983 |
[298] |
[237,265,158,333] |
0 |
hSpCas9 |
negative selection |
6420136 |
11022373 |
11022396 |
3 |
- |
27260156 |
EW8 |
viability |
AGTGGCCAGCGGATCTGACCTGG |
SLC6A1 |
ENSG00000157103 |
0.6267070365650436 |
[153] |
[149,165,313,114] |
9 |
hSpCas9 |
negative selection |
6420137 |
11020265 |
11020288 |
3 |
- |
27260156 |
EW8 |
viability |
AGTGTTGACCATGCTGTAGTTGG |
SLC6A1 |
ENSG00000157103 |
0.0814759861126726 |
[844] |
[940,711,601,685] |
1 |
hSpCas9 |
negative selection |
6484391 |
11022368 |
11022391 |
3 |
+ |
27260156 |
CORL105 |
viability |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.34872880374615933 |
[160] |
[321,183,339,133] |
6 |
hSpCas9 |
negative selection |
6541386 |
11020287 |
11020310 |
3 |
+ |
27260156 |
CORL105 |
viability |
TACCAACATGACCAGCGCTGTGG |
SLC6A1 |
ENSG00000157103 |
-0.2206182067472754 |
[298] |
[244,207,357,398] |
-4 |
hSpCas9 |
negative selection |
6541387 |
11022373 |
11022396 |
3 |
- |
27260156 |
CORL105 |
viability |
AGTGGCCAGCGGATCTGACCTGG |
SLC6A1 |
ENSG00000157103 |
0.43955391592187776 |
[153] |
[210,170,395,223] |
7 |
hSpCas9 |
negative selection |
6541388 |
11020265 |
11020288 |
3 |
- |
27260156 |
CORL105 |
viability |
AGTGTTGACCATGCTGTAGTTGG |
SLC6A1 |
ENSG00000157103 |
0.10106397472175344 |
[844] |
[1133,950,1084,1081] |
2 |
hSpCas9 |
negative selection |
6605642 |
11022368 |
11022391 |
3 |
+ |
27260156 |
HS294T |
viability |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
-0.20575120003512004 |
[160] |
[77,40,44,48] |
-3 |
hSpCas9 |
negative selection |
6662637 |
11020287 |
11020310 |
3 |
+ |
27260156 |
HS294T |
viability |
TACCAACATGACCAGCGCTGTGG |
SLC6A1 |
ENSG00000157103 |
-0.13210158211428613 |
[298] |
[89,101,121,109] |
-2 |
hSpCas9 |
negative selection |
6662638 |
11022373 |
11022396 |
3 |
- |
27260156 |
HS294T |
viability |
AGTGGCCAGCGGATCTGACCTGG |
SLC6A1 |
ENSG00000157103 |
1.1610280332341407 |
[153] |
[128,167,102,130] |
9 |
hSpCas9 |
negative selection |
6662639 |
11020265 |
11020288 |
3 |
- |
27260156 |
HS294T |
viability |
AGTGTTGACCATGCTGTAGTTGG |
SLC6A1 |
ENSG00000157103 |
0.5820183078116754 |
[844] |
[352,612,571,412] |
7 |
hSpCas9 |
negative selection |
6726893 |
11022368 |
11022391 |
3 |
+ |
27260156 |
HCC44 |
viability |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.7194033815957115 |
[160] |
[458,188,350,238] |
9 |
hSpCas9 |
negative selection |
6783888 |
11020287 |
11020310 |
3 |
+ |
27260156 |
HCC44 |
viability |
TACCAACATGACCAGCGCTGTGG |
SLC6A1 |
ENSG00000157103 |
0.31805369061572936 |
[298] |
[519,327,412,441] |
5 |
hSpCas9 |
negative selection |
6783889 |
11022373 |
11022396 |
3 |
- |
27260156 |
HCC44 |
viability |
AGTGGCCAGCGGATCTGACCTGG |
SLC6A1 |
ENSG00000157103 |
0.8631633050763591 |
[153] |
[282,212,448,352] |
9 |
hSpCas9 |
negative selection |
6783890 |
11020265 |
11020288 |
3 |
- |
27260156 |
HCC44 |
viability |
AGTGTTGACCATGCTGTAGTTGG |
SLC6A1 |
ENSG00000157103 |
0.16389970898231887 |
[844] |
[1062,911,1406,974] |
2 |
hSpCas9 |
negative selection |
6848144 |
11022368 |
11022391 |
3 |
+ |
27260156 |
G402 |
viability |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.504286989981749 |
[160] |
[191,576,147,204] |
6 |
hSpCas9 |
negative selection |
6905139 |
11020287 |
11020310 |
3 |
+ |
27260156 |
G402 |
viability |
TACCAACATGACCAGCGCTGTGG |
SLC6A1 |
ENSG00000157103 |
-0.1355259074703038 |
[298] |
[250,600,228,253] |
-2 |
hSpCas9 |
negative selection |
6905140 |
11022373 |
11022396 |
3 |
- |
27260156 |
G402 |
viability |
AGTGGCCAGCGGATCTGACCTGG |
SLC6A1 |
ENSG00000157103 |
-0.2222303666791392 |
[153] |
[365,27,161,111] |
-3 |
hSpCas9 |
negative selection |
6905141 |
11020265 |
11020288 |
3 |
- |
27260156 |
G402 |
viability |
AGTGTTGACCATGCTGTAGTTGG |
SLC6A1 |
ENSG00000157103 |
0.2601263786526189 |
[844] |
[1014,1381,999,1500] |
3 |
hSpCas9 |
negative selection |
6969395 |
11022368 |
11022391 |
3 |
+ |
27260156 |
L33 |
viability |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.1454940520333139 |
[160] |
[195,56,131,166] |
3 |
hSpCas9 |
negative selection |
7026390 |
11020287 |
11020310 |
3 |
+ |
27260156 |
L33 |
viability |
TACCAACATGACCAGCGCTGTGG |
SLC6A1 |
ENSG00000157103 |
-0.029299434387496825 |
[298] |
[253,165,142,285] |
0 |
hSpCas9 |
negative selection |
7026391 |
11022373 |
11022396 |
3 |
- |
27260156 |
L33 |
viability |
AGTGGCCAGCGGATCTGACCTGG |
SLC6A1 |
ENSG00000157103 |
0.7723753504491072 |
[153] |
[276,126,148,227] |
9 |
hSpCas9 |
negative selection |
7026392 |
11020265 |
11020288 |
3 |
- |
27260156 |
L33 |
viability |
AGTGTTGACCATGCTGTAGTTGG |
SLC6A1 |
ENSG00000157103 |
-0.2812495979771026 |
[844] |
[620,273,438,793] |
-6 |
hSpCas9 |
negative selection |
7090646 |
11022368 |
11022391 |
3 |
+ |
27260156 |
K562 |
viability |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.20956547971721262 |
[160] |
[215,263,179,25] |
2 |
hSpCas9 |
negative selection |
7147641 |
11020287 |
11020310 |
3 |
+ |
27260156 |
K562 |
viability |
TACCAACATGACCAGCGCTGTGG |
SLC6A1 |
ENSG00000157103 |
0.01208651257111415 |
[298] |
[178,439,231,224] |
0 |
hSpCas9 |
negative selection |
7147642 |
11022373 |
11022396 |
3 |
- |
27260156 |
K562 |
viability |
AGTGGCCAGCGGATCTGACCTGG |
SLC6A1 |
ENSG00000157103 |
-0.01710714493138732 |
[153] |
[154,82,84,206] |
0 |
hSpCas9 |
negative selection |
7147643 |
11020265 |
11020288 |
3 |
- |
27260156 |
K562 |
viability |
AGTGTTGACCATGCTGTAGTTGG |
SLC6A1 |
ENSG00000157103 |
0.1647359058450757 |
[844] |
[856,832,1199,508] |
2 |
hSpCas9 |
negative selection |
7211897 |
11022368 |
11022391 |
3 |
+ |
27260156 |
HT29 |
viability |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.19433102743613162 |
[160] |
[140,236,359,158] |
4 |
hSpCas9 |
negative selection |
7268892 |
11020287 |
11020310 |
3 |
+ |
27260156 |
HT29 |
viability |
TACCAACATGACCAGCGCTGTGG |
SLC6A1 |
ENSG00000157103 |
0.07519931307840444 |
[298] |
[460,372,316,382] |
1 |
hSpCas9 |
negative selection |
7268893 |
11022373 |
11022396 |
3 |
- |
27260156 |
HT29 |
viability |
AGTGGCCAGCGGATCTGACCTGG |
SLC6A1 |
ENSG00000157103 |
0.8274164355233367 |
[153] |
[193,423,349,352] |
9 |
hSpCas9 |
negative selection |
7268894 |
11020265 |
11020288 |
3 |
- |
27260156 |
HT29 |
viability |
AGTGTTGACCATGCTGTAGTTGG |
SLC6A1 |
ENSG00000157103 |
0.27158088776734335 |
[844] |
[1317,1092,1264,1264] |
5 |
hSpCas9 |
negative selection |
7333148 |
11022368 |
11022391 |
3 |
+ |
27260156 |
MHHES1 |
viability |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.5188778532724159 |
[160] |
[376,162,265,236] |
8 |
hSpCas9 |
negative selection |
7390143 |
11020287 |
11020310 |
3 |
+ |
27260156 |
MHHES1 |
viability |
TACCAACATGACCAGCGCTGTGG |
SLC6A1 |
ENSG00000157103 |
-0.1721560028282021 |
[298] |
[269,410,231,285] |
-3 |
hSpCas9 |
negative selection |
7390144 |
11022373 |
11022396 |
3 |
- |
27260156 |
MHHES1 |
viability |
AGTGGCCAGCGGATCTGACCTGG |
SLC6A1 |
ENSG00000157103 |
0.6191189523502093 |
[153] |
[302,243,245,267] |
9 |
hSpCas9 |
negative selection |
7390145 |
11020265 |
11020288 |
3 |
- |
27260156 |
MHHES1 |
viability |
AGTGTTGACCATGCTGTAGTTGG |
SLC6A1 |
ENSG00000157103 |
0.18666614629571288 |
[844] |
[1162,1180,1122,902] |
3 |
hSpCas9 |
negative selection |
7454399 |
11022368 |
11022391 |
3 |
+ |
27260156 |
MEWO |
viability |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
-0.07997929104504964 |
[160] |
[201,142,93] |
-2 |
hSpCas9 |
negative selection |
7511394 |
11020287 |
11020310 |
3 |
+ |
27260156 |
MEWO |
viability |
TACCAACATGACCAGCGCTGTGG |
SLC6A1 |
ENSG00000157103 |
-0.06929068027705076 |
[298] |
[263,323,210] |
-1 |
hSpCas9 |
negative selection |
7511395 |
11022373 |
11022396 |
3 |
- |
27260156 |
MEWO |
viability |
AGTGGCCAGCGGATCTGACCTGG |
SLC6A1 |
ENSG00000157103 |
0.5623448196864884 |
[153] |
[286,129,235] |
9 |
hSpCas9 |
negative selection |
7511396 |
11020265 |
11020288 |
3 |
- |
27260156 |
MEWO |
viability |
AGTGTTGACCATGCTGTAGTTGG |
SLC6A1 |
ENSG00000157103 |
-0.13898088006882026 |
[844] |
[802,749,616] |
-3 |
hSpCas9 |
negative selection |
7575650 |
11022368 |
11022391 |
3 |
+ |
27260156 |
LNCAPCLONEFGC |
viability |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
-0.21019675312506947 |
[160] |
[130,81,125,167] |
-3 |
hSpCas9 |
negative selection |
7632645 |
11020287 |
11020310 |
3 |
+ |
27260156 |
LNCAPCLONEFGC |
viability |
TACCAACATGACCAGCGCTGTGG |
SLC6A1 |
ENSG00000157103 |
0.20340558292407945 |
[298] |
[297,351,413,195] |
3 |
hSpCas9 |
negative selection |
7632646 |
11022373 |
11022396 |
3 |
- |
27260156 |
LNCAPCLONEFGC |
viability |
AGTGGCCAGCGGATCTGACCTGG |
SLC6A1 |
ENSG00000157103 |
0.31579275412403907 |
[153] |
[119,98,244,246] |
5 |
hSpCas9 |
negative selection |
7632647 |
11020265 |
11020288 |
3 |
- |
27260156 |
LNCAPCLONEFGC |
viability |
AGTGTTGACCATGCTGTAGTTGG |
SLC6A1 |
ENSG00000157103 |
0.08064377962120328 |
[844] |
[966,681,966,649] |
1 |
hSpCas9 |
negative selection |
7696901 |
11022368 |
11022391 |
3 |
+ |
27260156 |
PANC0327 |
viability |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
-0.33773743559735214 |
[160] |
[88,87,168,107] |
-5 |
hSpCas9 |
negative selection |
7753896 |
11020287 |
11020310 |
3 |
+ |
27260156 |
PANC0327 |
viability |
TACCAACATGACCAGCGCTGTGG |
SLC6A1 |
ENSG00000157103 |
0.20752867181691081 |
[298] |
[144,212,578,288] |
3 |
hSpCas9 |
negative selection |
7753897 |
11022373 |
11022396 |
3 |
- |
27260156 |
PANC0327 |
viability |
AGTGGCCAGCGGATCTGACCTGG |
SLC6A1 |
ENSG00000157103 |
0.12464401693388427 |
[153] |
[243,127,114,119] |
1 |
hSpCas9 |
negative selection |
7753898 |
11020265 |
11020288 |
3 |
- |
27260156 |
PANC0327 |
viability |
AGTGTTGACCATGCTGTAGTTGG |
SLC6A1 |
ENSG00000157103 |
0.012664882549576761 |
[844] |
[950,623,827,658] |
0 |
hSpCas9 |
negative selection |
7818152 |
11022368 |
11022391 |
3 |
+ |
27260156 |
NCIH2009 |
viability |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.07355513147280202 |
[160] |
[317,114,294] |
1 |
hSpCas9 |
negative selection |
7875147 |
11020287 |
11020310 |
3 |
+ |
27260156 |
NCIH2009 |
viability |
TACCAACATGACCAGCGCTGTGG |
SLC6A1 |
ENSG00000157103 |
0.0554426521692829 |
[298] |
[407,513,372] |
0 |
hSpCas9 |
negative selection |
7875148 |
11022373 |
11022396 |
3 |
- |
27260156 |
NCIH2009 |
viability |
AGTGGCCAGCGGATCTGACCTGG |
SLC6A1 |
ENSG00000157103 |
0.8281731686286414 |
[153] |
[313,322,495] |
9 |
hSpCas9 |
negative selection |
7875149 |
11020265 |
11020288 |
3 |
- |
27260156 |
NCIH2009 |
viability |
AGTGTTGACCATGCTGTAGTTGG |
SLC6A1 |
ENSG00000157103 |
-6.0005939111040796e-05 |
[844] |
[1424,1012,1152] |
0 |
hSpCas9 |
negative selection |
7939403 |
11022368 |
11022391 |
3 |
+ |
27260156 |
NCIH1373 |
viability |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
-0.47487994051600135 |
[160] |
[63,179,111,38] |
-5 |
hSpCas9 |
negative selection |
7996398 |
11020287 |
11020310 |
3 |
+ |
27260156 |
NCIH1373 |
viability |
TACCAACATGACCAGCGCTGTGG |
SLC6A1 |
ENSG00000157103 |
-0.2910515696769137 |
[298] |
[352,220,379,38] |
-3 |
hSpCas9 |
negative selection |
7996399 |
11022373 |
11022396 |
3 |
- |
27260156 |
NCIH1373 |
viability |
AGTGGCCAGCGGATCTGACCTGG |
SLC6A1 |
ENSG00000157103 |
0.11990768282573971 |
[153] |
[114,72,175,104] |
1 |
hSpCas9 |
negative selection |
7996400 |
11020265 |
11020288 |
3 |
- |
27260156 |
NCIH1373 |
viability |
AGTGTTGACCATGCTGTAGTTGG |
SLC6A1 |
ENSG00000157103 |
0.31857238211165284 |
[844] |
[1365,1008,1038,358] |
3 |
hSpCas9 |
negative selection |
8060654 |
11022368 |
11022391 |
3 |
+ |
27260156 |
PATU8902 |
viability |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.6781487356898886 |
[160] |
[435,374,61,672] |
7 |
hSpCas9 |
negative selection |
8117649 |
11020287 |
11020310 |
3 |
+ |
27260156 |
PATU8902 |
viability |
TACCAACATGACCAGCGCTGTGG |
SLC6A1 |
ENSG00000157103 |
-1.0531086903208045 |
[298] |
[150,232,193,228] |
-7 |
hSpCas9 |
negative selection |
8117650 |
11022373 |
11022396 |
3 |
- |
27260156 |
PATU8902 |
viability |
AGTGGCCAGCGGATCTGACCTGG |
SLC6A1 |
ENSG00000157103 |
0.6450404931491943 |
[153] |
[287,432,299,326] |
6 |
hSpCas9 |
negative selection |
8117651 |
11020265 |
11020288 |
3 |
- |
27260156 |
PATU8902 |
viability |
AGTGTTGACCATGCTGTAGTTGG |
SLC6A1 |
ENSG00000157103 |
-0.07688963649502545 |
[844] |
[767,1311,1032,1401] |
0 |
hSpCas9 |
negative selection |
8181905 |
11022368 |
11022391 |
3 |
+ |
27260156 |
PANC1 |
viability |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.012484576847141549 |
[160] |
[97,208,99,159] |
0 |
hSpCas9 |
negative selection |
8238900 |
11020287 |
11020310 |
3 |
+ |
27260156 |
PANC1 |
viability |
TACCAACATGACCAGCGCTGTGG |
SLC6A1 |
ENSG00000157103 |
-0.2940337337051485 |
[298] |
[161,365,169,174] |
-5 |
hSpCas9 |
negative selection |
8238901 |
11022373 |
11022396 |
3 |
- |
27260156 |
PANC1 |
viability |
AGTGGCCAGCGGATCTGACCTGG |
SLC6A1 |
ENSG00000157103 |
0.6764323410892537 |
[153] |
[153,171,351,165] |
9 |
hSpCas9 |
negative selection |
8238902 |
11020265 |
11020288 |
3 |
- |
27260156 |
PANC1 |
viability |
AGTGTTGACCATGCTGTAGTTGG |
SLC6A1 |
ENSG00000157103 |
0.01040742131949024 |
[844] |
[621,962,782,613] |
0 |
hSpCas9 |
negative selection |
8303156 |
11022368 |
11022391 |
3 |
+ |
27260156 |
PANC0813 |
viability |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
-0.16293451275062631 |
[160] |
[136,218,141,173] |
-3 |
hSpCas9 |
negative selection |
8360151 |
11020287 |
11020310 |
3 |
+ |
27260156 |
PANC0813 |
viability |
TACCAACATGACCAGCGCTGTGG |
SLC6A1 |
ENSG00000157103 |
0.0507416416805222 |
[298] |
[471,430,321,245] |
0 |
hSpCas9 |
negative selection |
8360152 |
11022373 |
11022396 |
3 |
- |
27260156 |
PANC0813 |
viability |
AGTGGCCAGCGGATCTGACCTGG |
SLC6A1 |
ENSG00000157103 |
1.1447198704743389 |
[153] |
[485,581,261,282] |
9 |
hSpCas9 |
negative selection |
8360153 |
11020265 |
11020288 |
3 |
- |
27260156 |
PANC0813 |
viability |
AGTGTTGACCATGCTGTAGTTGG |
SLC6A1 |
ENSG00000157103 |
-0.2911442678429701 |
[844] |
[667,900,690,960] |
-4 |
hSpCas9 |
negative selection |
8424407 |
11022368 |
11022391 |
3 |
+ |
27260156 |
RDES |
viability |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.4053563133623488 |
[160] |
[239,214,327,187] |
6 |
hSpCas9 |
negative selection |
8481402 |
11020287 |
11020310 |
3 |
+ |
27260156 |
RDES |
viability |
TACCAACATGACCAGCGCTGTGG |
SLC6A1 |
ENSG00000157103 |
-0.13925904426071256 |
[298] |
[276,243,406,331] |
-2 |
hSpCas9 |
negative selection |
8481403 |
11022373 |
11022396 |
3 |
- |
27260156 |
RDES |
viability |
AGTGGCCAGCGGATCTGACCTGG |
SLC6A1 |
ENSG00000157103 |
0.37436786952220347 |
[153] |
[202,261,267,172] |
6 |
hSpCas9 |
negative selection |
8481404 |
11020265 |
11020288 |
3 |
- |
27260156 |
RDES |
viability |
AGTGTTGACCATGCTGTAGTTGG |
SLC6A1 |
ENSG00000157103 |
0.1266451495455616 |
[844] |
[1001,939,1190,1112] |
2 |
hSpCas9 |
negative selection |
8545658 |
11022368 |
11022391 |
3 |
+ |
27260156 |
PC3 |
viability |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.466571636043146 |
[160] |
[91,182,400,329] |
8 |
hSpCas9 |
negative selection |
8602653 |
11020287 |
11020310 |
3 |
+ |
27260156 |
PC3 |
viability |
TACCAACATGACCAGCGCTGTGG |
SLC6A1 |
ENSG00000157103 |
-0.27330106533550647 |
[298] |
[240,184,295,253] |
-6 |
hSpCas9 |
negative selection |
8602654 |
11022373 |
11022396 |
3 |
- |
27260156 |
PC3 |
viability |
AGTGGCCAGCGGATCTGACCTGG |
SLC6A1 |
ENSG00000157103 |
0.9944347881586889 |
[153] |
[191,329,593,234] |
9 |
hSpCas9 |
negative selection |
8602655 |
11020265 |
11020288 |
3 |
- |
27260156 |
PC3 |
viability |
AGTGTTGACCATGCTGTAGTTGG |
SLC6A1 |
ENSG00000157103 |
0.20013768929412645 |
[844] |
[598,716,2012,1036] |
4 |
hSpCas9 |
negative selection |
8666909 |
11022368 |
11022391 |
3 |
+ |
27260156 |
PATU8988T |
viability |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.4717544543129486 |
[160] |
[173,276,112,313] |
7 |
hSpCas9 |
negative selection |
8723904 |
11020287 |
11020310 |
3 |
+ |
27260156 |
PATU8988T |
viability |
TACCAACATGACCAGCGCTGTGG |
SLC6A1 |
ENSG00000157103 |
-0.04653572203150569 |
[298] |
[176,191,197,567] |
-1 |
hSpCas9 |
negative selection |
8723905 |
11022373 |
11022396 |
3 |
- |
27260156 |
PATU8988T |
viability |
AGTGGCCAGCGGATCTGACCTGG |
SLC6A1 |
ENSG00000157103 |
1.0059489336363112 |
[153] |
[386,439,168,206] |
9 |
hSpCas9 |
negative selection |
8723906 |
11020265 |
11020288 |
3 |
- |
27260156 |
PATU8988T |
viability |
AGTGTTGACCATGCTGTAGTTGG |
SLC6A1 |
ENSG00000157103 |
0.2506512282228668 |
[844] |
[1146,875,833,1025] |
4 |
hSpCas9 |
negative selection |
8788160 |
11022368 |
11022391 |
3 |
+ |
27260156 |
T47D |
viability |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.25082392014890775 |
[160] |
[228,221,194,247] |
5 |
hSpCas9 |
negative selection |
8845155 |
11020287 |
11020310 |
3 |
+ |
27260156 |
T47D |
viability |
TACCAACATGACCAGCGCTGTGG |
SLC6A1 |
ENSG00000157103 |
-0.08888167991176188 |
[298] |
[329,289,357,334] |
-2 |
hSpCas9 |
negative selection |
8845156 |
11022373 |
11022396 |
3 |
- |
27260156 |
T47D |
viability |
AGTGGCCAGCGGATCTGACCTGG |
SLC6A1 |
ENSG00000157103 |
0.6951676341476649 |
[153] |
[327,265,284,284] |
9 |
hSpCas9 |
negative selection |
8845157 |
11020265 |
11020288 |
3 |
- |
27260156 |
T47D |
viability |
AGTGTTGACCATGCTGTAGTTGG |
SLC6A1 |
ENSG00000157103 |
0.08818120025530773 |
[844] |
[1054,1023,1106,998] |
1 |
hSpCas9 |
negative selection |
8909411 |
11022368 |
11022391 |
3 |
+ |
27260156 |
SU8686 |
viability |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
-0.18267838642152978 |
[160] |
[103,182,81,198] |
-3 |
hSpCas9 |
negative selection |
8966406 |
11020287 |
11020310 |
3 |
+ |
27260156 |
SU8686 |
viability |
TACCAACATGACCAGCGCTGTGG |
SLC6A1 |
ENSG00000157103 |
0.08351894581909192 |
[298] |
[267,216,393,410] |
1 |
hSpCas9 |
negative selection |
8966407 |
11022373 |
11022396 |
3 |
- |
27260156 |
SU8686 |
viability |
AGTGGCCAGCGGATCTGACCTGG |
SLC6A1 |
ENSG00000157103 |
0.741279835876679 |
[153] |
[162,259,338,271] |
9 |
hSpCas9 |
negative selection |
8966408 |
11020265 |
11020288 |
3 |
- |
27260156 |
SU8686 |
viability |
AGTGTTGACCATGCTGTAGTTGG |
SLC6A1 |
ENSG00000157103 |
0.1661041970700865 |
[844] |
[871,777,1192,946] |
3 |
hSpCas9 |
negative selection |
9030662 |
11022368 |
11022391 |
3 |
+ |
27260156 |
SKES1 |
viability |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.2843546279436766 |
[160] |
[297,243,177,92] |
6 |
hSpCas9 |
negative selection |
9087657 |
11020287 |
11020310 |
3 |
+ |
27260156 |
SKES1 |
viability |
TACCAACATGACCAGCGCTGTGG |
SLC6A1 |
ENSG00000157103 |
-0.2571513668402652 |
[298] |
[210,262,271,245] |
-5 |
hSpCas9 |
negative selection |
9087658 |
11022373 |
11022396 |
3 |
- |
27260156 |
SKES1 |
viability |
AGTGGCCAGCGGATCTGACCTGG |
SLC6A1 |
ENSG00000157103 |
0.9318071570197638 |
[153] |
[327,239,343,258] |
9 |
hSpCas9 |
negative selection |
9087659 |
11020265 |
11020288 |
3 |
- |
27260156 |
SKES1 |
viability |
AGTGTTGACCATGCTGTAGTTGG |
SLC6A1 |
ENSG00000157103 |
-0.024776067405793745 |
[844] |
[784,938,775,814] |
0 |
hSpCas9 |
negative selection |
9151913 |
11022368 |
11022391 |
3 |
+ |
27260156 |
TOV112D |
viability |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
-0.11370311511020303 |
[160] |
[167,194,140,105] |
-2 |
hSpCas9 |
negative selection |
9208908 |
11020287 |
11020310 |
3 |
+ |
27260156 |
TOV112D |
viability |
TACCAACATGACCAGCGCTGTGG |
SLC6A1 |
ENSG00000157103 |
-0.4389253610731172 |
[298] |
[252,180,251,190] |
-7 |
hSpCas9 |
negative selection |
9208909 |
11022373 |
11022396 |
3 |
- |
27260156 |
TOV112D |
viability |
AGTGGCCAGCGGATCTGACCTGG |
SLC6A1 |
ENSG00000157103 |
0.25800025069862964 |
[153] |
[87,214,181,249] |
5 |
hSpCas9 |
negative selection |
9208910 |
11020265 |
11020288 |
3 |
- |
27260156 |
TOV112D |
viability |
AGTGTTGACCATGCTGTAGTTGG |
SLC6A1 |
ENSG00000157103 |
-0.019417384386892333 |
[844] |
[1007,752,809,763] |
0 |
hSpCas9 |
negative selection |
9273164 |
11022368 |
11022391 |
3 |
+ |
27260156 |
TC71 |
viability |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
-0.24979277126130905 |
[160] |
[108,143,123,208] |
-6 |
hSpCas9 |
negative selection |
9330159 |
11020287 |
11020310 |
3 |
+ |
27260156 |
TC71 |
viability |
TACCAACATGACCAGCGCTGTGG |
SLC6A1 |
ENSG00000157103 |
-0.03949051965784256 |
[298] |
[281,388,291,283] |
-1 |
hSpCas9 |
negative selection |
9330160 |
11022373 |
11022396 |
3 |
- |
27260156 |
TC71 |
viability |
AGTGGCCAGCGGATCTGACCTGG |
SLC6A1 |
ENSG00000157103 |
0.39524398403521555 |
[153] |
[177,241,179,273] |
8 |
hSpCas9 |
negative selection |
9330161 |
11020265 |
11020288 |
3 |
- |
27260156 |
TC71 |
viability |
AGTGTTGACCATGCTGTAGTTGG |
SLC6A1 |
ENSG00000157103 |
-0.18003927055081947 |
[844] |
[874,783,682,861] |
-5 |
hSpCas9 |
negative selection |
9394415 |
11022368 |
11022391 |
3 |
+ |
27260156 |
TC32 |
viability |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
-0.033014510617552784 |
[160] |
[89,155,202,146] |
0 |
hSpCas9 |
negative selection |
9451410 |
11020287 |
11020310 |
3 |
+ |
27260156 |
TC32 |
viability |
TACCAACATGACCAGCGCTGTGG |
SLC6A1 |
ENSG00000157103 |
-0.044350829911025014 |
[298] |
[170,238,423,292] |
-1 |
hSpCas9 |
negative selection |
9451411 |
11022373 |
11022396 |
3 |
- |
27260156 |
TC32 |
viability |
AGTGGCCAGCGGATCTGACCTGG |
SLC6A1 |
ENSG00000157103 |
0.4526117733382309 |
[153] |
[146,141,316,224] |
7 |
hSpCas9 |
negative selection |
9451412 |
11020265 |
11020288 |
3 |
- |
27260156 |
TC32 |
viability |
AGTGTTGACCATGCTGTAGTTGG |
SLC6A1 |
ENSG00000157103 |
-0.13879826002299245 |
[844] |
[709,436,923,928] |
-2 |
hSpCas9 |
negative selection |
9515666 |
11020202 |
11020225 |
3 |
+ |
27869803 |
HPAFII |
viability after 27 days |
TGTCCTTGCAGACACTGCCGTGG |
SLC6A1 |
ENSG00000157103 |
0.46624930282292465 |
[189] |
[167,112,NaN] |
4 |
hSpCas9 |
negative selection |
9581789 |
11022368 |
11022391 |
3 |
+ |
27869803 |
HPAFII |
viability after 27 days |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.293537680626272 |
[158] |
[132,76,NaN] |
2 |
hSpCas9 |
negative selection |
9581790 |
11025519 |
11025542 |
3 |
- |
27869803 |
HPAFII |
viability after 27 days |
GAGGATGCCCTCCTTGGCCCCGG |
SLC6A1 |
ENSG00000157103 |
3.2573564110857505 |
[19] |
[219,0,NaN] |
9 |
hSpCas9 |
negative selection |
9581791 |
11020202 |
11020225 |
3 |
+ |
27869803 |
HPAFII |
viability after 15 days |
TGTCCTTGCAGACACTGCCGTGG |
SLC6A1 |
ENSG00000157103 |
0.1992772221560268 |
[189] |
[358,156,NaN] |
2 |
hSpCas9 |
negative selection |
9664238 |
11022368 |
11022391 |
3 |
+ |
27869803 |
HPAFII |
viability after 15 days |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.30756019738762547 |
[158] |
[237,194,NaN] |
3 |
hSpCas9 |
negative selection |
9664239 |
11025519 |
11025542 |
3 |
- |
27869803 |
HPAFII |
viability after 15 days |
GAGGATGCCCTCCTTGGCCCCGG |
SLC6A1 |
ENSG00000157103 |
0.5238470116077947 |
[19] |
[78,0,NaN] |
6 |
hSpCas9 |
negative selection |
9664240 |
11020202 |
11020225 |
3 |
+ |
27869803 |
ASPC1 |
viability after 36 days |
TGTCCTTGCAGACACTGCCGTGG |
SLC6A1 |
ENSG00000157103 |
0.11938882065820133 |
[334] |
[66,219,93] |
1 |
hSpCas9 |
negative selection |
9746687 |
11022368 |
11022391 |
3 |
+ |
27869803 |
ASPC1 |
viability after 36 days |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.4226134157026265 |
[510] |
[392,162,188] |
4 |
hSpCas9 |
negative selection |
9746688 |
11025519 |
11025542 |
3 |
- |
27869803 |
ASPC1 |
viability after 36 days |
GAGGATGCCCTCCTTGGCCCCGG |
SLC6A1 |
ENSG00000157103 |
1.2706867131358401 |
[137] |
[4,177,143] |
9 |
hSpCas9 |
negative selection |
9746689 |
11020202 |
11020225 |
3 |
+ |
27869803 |
PATU8988S |
viability after 35 days |
TGTCCTTGCAGACACTGCCGTGG |
SLC6A1 |
ENSG00000157103 |
0.10449220895824818 |
[395] |
[157,184,NaN] |
1 |
hSpCas9 |
negative selection |
9829136 |
11022368 |
11022391 |
3 |
+ |
27869803 |
PATU8988S |
viability after 35 days |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
-0.3309395024708362 |
[452] |
[165,123,NaN] |
-3 |
hSpCas9 |
negative selection |
9829137 |
11025519 |
11025542 |
3 |
- |
27869803 |
PATU8988S |
viability after 35 days |
GAGGATGCCCTCCTTGGCCCCGG |
SLC6A1 |
ENSG00000157103 |
-1.3143386851781982 |
[197] |
[60,2,NaN] |
-8 |
hSpCas9 |
negative selection |
9829138 |
11020202 |
11020225 |
3 |
+ |
27869803 |
PATU8988S |
viability after 31 days |
TGTCCTTGCAGACACTGCCGTGG |
SLC6A1 |
ENSG00000157103 |
0.36528000686045237 |
[395] |
[198,208,NaN] |
4 |
hSpCas9 |
negative selection |
9911585 |
11022368 |
11022391 |
3 |
+ |
27869803 |
PATU8988S |
viability after 31 days |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.03260575946614053 |
[452] |
[182,186,NaN] |
0 |
hSpCas9 |
negative selection |
9911586 |
11025519 |
11025542 |
3 |
- |
27869803 |
PATU8988S |
viability after 31 days |
GAGGATGCCCTCCTTGGCCCCGG |
SLC6A1 |
ENSG00000157103 |
-1.2885462820551268 |
[197] |
[30,33,NaN] |
-8 |
hSpCas9 |
negative selection |
9911587 |
11020202 |
11020225 |
3 |
+ |
27869803 |
HPAFII |
viability after 35 days |
TGTCCTTGCAGACACTGCCGTGG |
SLC6A1 |
ENSG00000157103 |
0.2390577309215562 |
[189] |
[97,130,NaN] |
1 |
hSpCas9 |
negative selection |
9994034 |
11022368 |
11022391 |
3 |
+ |
27869803 |
HPAFII |
viability after 35 days |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.9438945037267756 |
[158] |
[199,103,NaN] |
6 |
hSpCas9 |
negative selection |
9994035 |
11025519 |
11025542 |
3 |
- |
27869803 |
HPAFII |
viability after 35 days |
GAGGATGCCCTCCTTGGCCCCGG |
SLC6A1 |
ENSG00000157103 |
3.428972428202692 |
[19] |
[204,0,NaN] |
9 |
hSpCas9 |
negative selection |
9994036 |
11020202 |
11020225 |
3 |
+ |
27869803 |
HPAFII |
viability after 31 days |
TGTCCTTGCAGACACTGCCGTGG |
SLC6A1 |
ENSG00000157103 |
-0.024104804988269335 |
[189] |
[112,95,NaN] |
0 |
hSpCas9 |
negative selection |
10076483 |
11022368 |
11022391 |
3 |
+ |
27869803 |
HPAFII |
viability after 31 days |
ATAAGCCAGGTCAGATCCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.5174257097760414 |
[158] |
[143,109,NaN] |
4 |
hSpCas9 |
negative selection |
10076484 |
11025519 |
11025542 |
3 |
- |
27869803 |
HPAFII |
viability after 31 days |
GAGGATGCCCTCCTTGGCCCCGG |
SLC6A1 |
ENSG00000157103 |
2.477886756481976 |
[19] |
[118,0,NaN] |
9 |
hSpCas9 |
negative selection |
10076485 |
11034571 |
11034594 |
3 |
- |
28162770 |
P31FUJ |
viability |
GGGGAAAACATAGTTTCCCATGG |
SLC6A1 |
ENSG00000157103 |
-0.8848789009940723 |
[43] |
[27] |
-6 |
hSpCas9 |
negative selection |
10237852 |
11020202 |
11020225 |
3 |
+ |
28162770 |
P31FUJ |
viability |
TGTCCTTGCAGACACTGCCGTGG |
SLC6A1 |
ENSG00000157103 |
-0.01648429748761515 |
[339] |
[394] |
0 |
hSpCas9 |
negative selection |
10237853 |
11020298 |
11020321 |
3 |
- |
28162770 |
P31FUJ |
viability |
CCAGAACTCCACCACAGCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.500971585262118 |
[180] |
[300] |
5 |
hSpCas9 |
negative selection |
10237854 |
11022345 |
11022368 |
3 |
+ |
28162770 |
P31FUJ |
viability |
GCATCAGATGACGGACGGGCTGG |
SLC6A1 |
ENSG00000157103 |
0.9925526307779307 |
[138] |
[324] |
9 |
hSpCas9 |
negative selection |
10237855 |
11022410 |
11022433 |
3 |
- |
28162770 |
P31FUJ |
viability |
ATACACAAGGATCCAGGCGATGG |
SLC6A1 |
ENSG00000157103 |
0.21971000028312826 |
[18] |
[25] |
2 |
hSpCas9 |
negative selection |
10237856 |
11028745 |
11028768 |
3 |
+ |
28162770 |
P31FUJ |
viability |
GGCGTTCCTGGCATACCCAGAGG |
SLC6A1 |
ENSG00000157103 |
0.5781360657992092 |
[516] |
[906] |
6 |
hSpCas9 |
negative selection |
10237857 |
11028789 |
11028812 |
3 |
- |
28162770 |
P31FUJ |
viability |
GAAGAGGATGGCCCAGAGTGGGG |
SLC6A1 |
ENSG00000157103 |
0.20608203681883308 |
[359] |
[487] |
2 |
hSpCas9 |
negative selection |
10237858 |
11029232 |
11029255 |
3 |
+ |
28162770 |
P31FUJ |
viability |
GGAGGGCTTCATCACAGCCCTGG |
SLC6A1 |
ENSG00000157103 |
1.0045560673190195 |
[273] |
[645] |
9 |
hSpCas9 |
negative selection |
10237859 |
11029274 |
11029297 |
3 |
- |
28162770 |
P31FUJ |
viability |
AGAGCTCTCTGCGGTTGCGGAGG |
SLC6A1 |
ENSG00000157103 |
0.8467860603234838 |
[334] |
[707] |
8 |
hSpCas9 |
negative selection |
10237860 |
11034571 |
11034594 |
3 |
- |
28162770 |
TF1 |
viability |
GGGGAAAACATAGTTTCCCATGG |
SLC6A1 |
ENSG00000157103 |
NaN |
[NaN] |
[104] |
1 |
hSpCas9 |
negative selection |
10407218 |
11020202 |
11020225 |
3 |
+ |
28162770 |
TF1 |
viability |
TGTCCTTGCAGACACTGCCGTGG |
SLC6A1 |
ENSG00000157103 |
NaN |
[NaN] |
[248] |
1 |
hSpCas9 |
negative selection |
10407219 |
11020298 |
11020321 |
3 |
- |
28162770 |
TF1 |
viability |
CCAGAACTCCACCACAGCGCTGG |
SLC6A1 |
ENSG00000157103 |
NaN |
[NaN] |
[130] |
1 |
hSpCas9 |
negative selection |
10407220 |
11022345 |
11022368 |
3 |
+ |
28162770 |
TF1 |
viability |
GCATCAGATGACGGACGGGCTGG |
SLC6A1 |
ENSG00000157103 |
NaN |
[NaN] |
[80] |
1 |
hSpCas9 |
negative selection |
10407221 |
11022410 |
11022433 |
3 |
- |
28162770 |
TF1 |
viability |
ATACACAAGGATCCAGGCGATGG |
SLC6A1 |
ENSG00000157103 |
NaN |
[NaN] |
[119] |
1 |
hSpCas9 |
negative selection |
10407222 |
11028745 |
11028768 |
3 |
+ |
28162770 |
TF1 |
viability |
GGCGTTCCTGGCATACCCAGAGG |
SLC6A1 |
ENSG00000157103 |
NaN |
[NaN] |
[511] |
1 |
hSpCas9 |
negative selection |
10407223 |
11028789 |
11028812 |
3 |
- |
28162770 |
TF1 |
viability |
GAAGAGGATGGCCCAGAGTGGGG |
SLC6A1 |
ENSG00000157103 |
NaN |
[NaN] |
[431] |
1 |
hSpCas9 |
negative selection |
10407224 |
11029232 |
11029255 |
3 |
+ |
28162770 |
TF1 |
viability |
GGAGGGCTTCATCACAGCCCTGG |
SLC6A1 |
ENSG00000157103 |
NaN |
[NaN] |
[421] |
1 |
hSpCas9 |
negative selection |
10407225 |
11029274 |
11029297 |
3 |
- |
28162770 |
TF1 |
viability |
AGAGCTCTCTGCGGTTGCGGAGG |
SLC6A1 |
ENSG00000157103 |
NaN |
[NaN] |
[639] |
1 |
hSpCas9 |
negative selection |
10407226 |
11034571 |
11034594 |
3 |
- |
28162770 |
SKM1 |
viability |
GGGGAAAACATAGTTTCCCATGG |
SLC6A1 |
ENSG00000157103 |
-0.532495080827021 |
[8] |
[10] |
-4 |
hSpCas9 |
negative selection |
10576584 |
11020202 |
11020225 |
3 |
+ |
28162770 |
SKM1 |
viability |
TGTCCTTGCAGACACTGCCGTGG |
SLC6A1 |
ENSG00000157103 |
0.6428843507073999 |
[95] |
[264] |
6 |
hSpCas9 |
negative selection |
10576585 |
11020298 |
11020321 |
3 |
- |
28162770 |
SKM1 |
viability |
CCAGAACTCCACCACAGCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.39617847202752804 |
[48] |
[113] |
4 |
hSpCas9 |
negative selection |
10576586 |
11022345 |
11022368 |
3 |
+ |
28162770 |
SKM1 |
viability |
GCATCAGATGACGGACGGGCTGG |
SLC6A1 |
ENSG00000157103 |
0.19393984584701604 |
[44] |
[90] |
2 |
hSpCas9 |
negative selection |
10576587 |
11022410 |
11022433 |
3 |
- |
28162770 |
SKM1 |
viability |
ATACACAAGGATCCAGGCGATGG |
SLC6A1 |
ENSG00000157103 |
-0.6414294523801847 |
[14] |
[16] |
-5 |
hSpCas9 |
negative selection |
10576588 |
11028745 |
11028768 |
3 |
+ |
28162770 |
SKM1 |
viability |
GGCGTTCCTGGCATACCCAGAGG |
SLC6A1 |
ENSG00000157103 |
-0.30742852519224717 |
[76] |
[109] |
-3 |
hSpCas9 |
negative selection |
10576589 |
11028789 |
11028812 |
3 |
- |
28162770 |
SKM1 |
viability |
GAAGAGGATGGCCCAGAGTGGGG |
SLC6A1 |
ENSG00000157103 |
-0.12866303625605757 |
[93] |
[151] |
-1 |
hSpCas9 |
negative selection |
10576590 |
11029232 |
11029255 |
3 |
+ |
28162770 |
SKM1 |
viability |
GGAGGGCTTCATCACAGCCCTGG |
SLC6A1 |
ENSG00000157103 |
0.5654499695849389 |
[98] |
[258] |
5 |
hSpCas9 |
negative selection |
10576591 |
11029274 |
11029297 |
3 |
- |
28162770 |
SKM1 |
viability |
AGAGCTCTCTGCGGTTGCGGAGG |
SLC6A1 |
ENSG00000157103 |
0.5753337995233793 |
[81] |
[215] |
5 |
hSpCas9 |
negative selection |
10576592 |
11034571 |
11034594 |
3 |
- |
28162770 |
SKM1 |
viability |
GGGGAAAACATAGTTTCCCATGG |
SLC6A1 |
ENSG00000157103 |
-0.532495080827021 |
[8] |
[10] |
-4 |
hSpCas9 |
negative selection |
10745950 |
11020202 |
11020225 |
3 |
+ |
28162770 |
SKM1 |
viability |
TGTCCTTGCAGACACTGCCGTGG |
SLC6A1 |
ENSG00000157103 |
0.6428843507073999 |
[95] |
[264] |
6 |
hSpCas9 |
negative selection |
10745951 |
11020298 |
11020321 |
3 |
- |
28162770 |
SKM1 |
viability |
CCAGAACTCCACCACAGCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.39617847202752804 |
[48] |
[113] |
4 |
hSpCas9 |
negative selection |
10745952 |
11022345 |
11022368 |
3 |
+ |
28162770 |
SKM1 |
viability |
GCATCAGATGACGGACGGGCTGG |
SLC6A1 |
ENSG00000157103 |
0.19393984584701604 |
[44] |
[90] |
2 |
hSpCas9 |
negative selection |
10745953 |
11022410 |
11022433 |
3 |
- |
28162770 |
SKM1 |
viability |
ATACACAAGGATCCAGGCGATGG |
SLC6A1 |
ENSG00000157103 |
-0.6414294523801847 |
[14] |
[16] |
-5 |
hSpCas9 |
negative selection |
10745954 |
11028745 |
11028768 |
3 |
+ |
28162770 |
SKM1 |
viability |
GGCGTTCCTGGCATACCCAGAGG |
SLC6A1 |
ENSG00000157103 |
-0.30742852519224717 |
[76] |
[109] |
-3 |
hSpCas9 |
negative selection |
10745955 |
11028789 |
11028812 |
3 |
- |
28162770 |
SKM1 |
viability |
GAAGAGGATGGCCCAGAGTGGGG |
SLC6A1 |
ENSG00000157103 |
-0.12866303625605757 |
[93] |
[151] |
-1 |
hSpCas9 |
negative selection |
10745956 |
11029232 |
11029255 |
3 |
+ |
28162770 |
SKM1 |
viability |
GGAGGGCTTCATCACAGCCCTGG |
SLC6A1 |
ENSG00000157103 |
0.5654499695849389 |
[98] |
[258] |
5 |
hSpCas9 |
negative selection |
10745957 |
11029274 |
11029297 |
3 |
- |
28162770 |
SKM1 |
viability |
AGAGCTCTCTGCGGTTGCGGAGG |
SLC6A1 |
ENSG00000157103 |
0.5753337995233793 |
[81] |
[215] |
5 |
hSpCas9 |
negative selection |
10745958 |
11034571 |
11034594 |
3 |
- |
28162770 |
PL21 |
viability |
GGGGAAAACATAGTTTCCCATGG |
SLC6A1 |
ENSG00000157103 |
1.7851021152104762 |
[19] |
[29] |
9 |
hSpCas9 |
negative selection |
10915316 |
11020202 |
11020225 |
3 |
+ |
28162770 |
PL21 |
viability |
TGTCCTTGCAGACACTGCCGTGG |
SLC6A1 |
ENSG00000157103 |
-0.008362419063688065 |
[378] |
[163] |
0 |
hSpCas9 |
negative selection |
10915317 |
11020298 |
11020321 |
3 |
- |
28162770 |
PL21 |
viability |
CCAGAACTCCACCACAGCGCTGG |
SLC6A1 |
ENSG00000157103 |
1.6055910649389658 |
[150] |
[199] |
9 |
hSpCas9 |
negative selection |
10915318 |
11022345 |
11022368 |
3 |
+ |
28162770 |
PL21 |
viability |
GCATCAGATGACGGACGGGCTGG |
SLC6A1 |
ENSG00000157103 |
0.49526765003296724 |
[162] |
[99] |
4 |
hSpCas9 |
negative selection |
10915319 |
11022410 |
11022433 |
3 |
- |
28162770 |
PL21 |
viability |
ATACACAAGGATCCAGGCGATGG |
SLC6A1 |
ENSG00000157103 |
0.024289779089902597 |
[60] |
[26] |
0 |
hSpCas9 |
negative selection |
10915320 |
11028745 |
11028768 |
3 |
+ |
28162770 |
PL21 |
viability |
GGCGTTCCTGGCATACCCAGAGG |
SLC6A1 |
ENSG00000157103 |
-0.6461509701152268 |
[337] |
[93] |
-4 |
hSpCas9 |
negative selection |
10915321 |
11028789 |
11028812 |
3 |
- |
28162770 |
PL21 |
viability |
GAAGAGGATGGCCCAGAGTGGGG |
SLC6A1 |
ENSG00000157103 |
-0.47793229062331744 |
[191] |
[59] |
-3 |
hSpCas9 |
negative selection |
10915322 |
11029232 |
11029255 |
3 |
+ |
28162770 |
PL21 |
viability |
GGAGGGCTTCATCACAGCCCTGG |
SLC6A1 |
ENSG00000157103 |
1.0221910477536262 |
[292] |
[258] |
8 |
hSpCas9 |
negative selection |
10915323 |
11029274 |
11029297 |
3 |
- |
28162770 |
PL21 |
viability |
AGAGCTCTCTGCGGTTGCGGAGG |
SLC6A1 |
ENSG00000157103 |
-1.0382651248357588 |
[301] |
[63] |
-6 |
hSpCas9 |
negative selection |
10915324 |
11034571 |
11034594 |
3 |
- |
28162770 |
P31FUJ |
viability |
GGGGAAAACATAGTTTCCCATGG |
SLC6A1 |
ENSG00000157103 |
-0.8848789009940723 |
[43] |
[27] |
-6 |
hSpCas9 |
negative selection |
11084682 |
11020202 |
11020225 |
3 |
+ |
28162770 |
P31FUJ |
viability |
TGTCCTTGCAGACACTGCCGTGG |
SLC6A1 |
ENSG00000157103 |
-0.01648429748761515 |
[339] |
[394] |
0 |
hSpCas9 |
negative selection |
11084683 |
11020298 |
11020321 |
3 |
- |
28162770 |
P31FUJ |
viability |
CCAGAACTCCACCACAGCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.500971585262118 |
[180] |
[300] |
5 |
hSpCas9 |
negative selection |
11084684 |
11022345 |
11022368 |
3 |
+ |
28162770 |
P31FUJ |
viability |
GCATCAGATGACGGACGGGCTGG |
SLC6A1 |
ENSG00000157103 |
0.9925526307779307 |
[138] |
[324] |
9 |
hSpCas9 |
negative selection |
11084685 |
11022410 |
11022433 |
3 |
- |
28162770 |
P31FUJ |
viability |
ATACACAAGGATCCAGGCGATGG |
SLC6A1 |
ENSG00000157103 |
0.21971000028312826 |
[18] |
[25] |
2 |
hSpCas9 |
negative selection |
11084686 |
11028745 |
11028768 |
3 |
+ |
28162770 |
P31FUJ |
viability |
GGCGTTCCTGGCATACCCAGAGG |
SLC6A1 |
ENSG00000157103 |
0.5781360657992092 |
[516] |
[906] |
6 |
hSpCas9 |
negative selection |
11084687 |
11028789 |
11028812 |
3 |
- |
28162770 |
P31FUJ |
viability |
GAAGAGGATGGCCCAGAGTGGGG |
SLC6A1 |
ENSG00000157103 |
0.20608203681883308 |
[359] |
[487] |
2 |
hSpCas9 |
negative selection |
11084688 |
11029232 |
11029255 |
3 |
+ |
28162770 |
P31FUJ |
viability |
GGAGGGCTTCATCACAGCCCTGG |
SLC6A1 |
ENSG00000157103 |
1.0045560673190195 |
[273] |
[645] |
9 |
hSpCas9 |
negative selection |
11084689 |
11029274 |
11029297 |
3 |
- |
28162770 |
P31FUJ |
viability |
AGAGCTCTCTGCGGTTGCGGAGG |
SLC6A1 |
ENSG00000157103 |
0.8467860603234838 |
[334] |
[707] |
8 |
hSpCas9 |
negative selection |
11084690 |
11034571 |
11034594 |
3 |
- |
28162770 |
OCIAML5 |
viability |
GGGGAAAACATAGTTTCCCATGG |
SLC6A1 |
ENSG00000157103 |
1.6763124014907915 |
[12] |
[74] |
9 |
hSpCas9 |
negative selection |
11254048 |
11020202 |
11020225 |
3 |
+ |
28162770 |
OCIAML5 |
viability |
TGTCCTTGCAGACACTGCCGTGG |
SLC6A1 |
ENSG00000157103 |
1.297680548640685 |
[127] |
[567] |
9 |
hSpCas9 |
negative selection |
11254049 |
11020298 |
11020321 |
3 |
- |
28162770 |
OCIAML5 |
viability |
CCAGAACTCCACCACAGCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.16387497300502465 |
[89] |
[181] |
1 |
hSpCas9 |
negative selection |
11254050 |
11022345 |
11022368 |
3 |
+ |
28162770 |
OCIAML5 |
viability |
GCATCAGATGACGGACGGGCTGG |
SLC6A1 |
ENSG00000157103 |
1.0689451329891746 |
[60] |
[230] |
8 |
hSpCas9 |
negative selection |
11254051 |
11022410 |
11022433 |
3 |
- |
28162770 |
OCIAML5 |
viability |
ATACACAAGGATCCAGGCGATGG |
SLC6A1 |
ENSG00000157103 |
-5.7100475659915695 |
[28] |
[0] |
-9 |
hSpCas9 |
negative selection |
11254052 |
11028745 |
11028768 |
3 |
+ |
28162770 |
OCIAML5 |
viability |
GGCGTTCCTGGCATACCCAGAGG |
SLC6A1 |
ENSG00000157103 |
0.20642907844614744 |
[144] |
[301] |
1 |
hSpCas9 |
negative selection |
11254053 |
11028789 |
11028812 |
3 |
- |
28162770 |
OCIAML5 |
viability |
GAAGAGGATGGCCCAGAGTGGGG |
SLC6A1 |
ENSG00000157103 |
0.39185901202209233 |
[151] |
[359] |
3 |
hSpCas9 |
negative selection |
11254054 |
11029232 |
11029255 |
3 |
+ |
28162770 |
OCIAML5 |
viability |
GGAGGGCTTCATCACAGCCCTGG |
SLC6A1 |
ENSG00000157103 |
0.3444935570817821 |
[160] |
[368] |
3 |
hSpCas9 |
negative selection |
11254055 |
11029274 |
11029297 |
3 |
- |
28162770 |
OCIAML5 |
viability |
AGAGCTCTCTGCGGTTGCGGAGG |
SLC6A1 |
ENSG00000157103 |
1.3715820064428763 |
[163] |
[765] |
9 |
hSpCas9 |
negative selection |
11254056 |
11034571 |
11034594 |
3 |
- |
28162770 |
EOL1 |
viability |
GGGGAAAACATAGTTTCCCATGG |
SLC6A1 |
ENSG00000157103 |
1.1540296176933018 |
[28] |
[33] |
8 |
hSpCas9 |
negative selection |
11423414 |
11020202 |
11020225 |
3 |
+ |
28162770 |
EOL1 |
viability |
TGTCCTTGCAGACACTGCCGTGG |
SLC6A1 |
ENSG00000157103 |
0.36667893173165345 |
[632] |
[429] |
3 |
hSpCas9 |
negative selection |
11423415 |
11020298 |
11020321 |
3 |
- |
28162770 |
EOL1 |
viability |
CCAGAACTCCACCACAGCGCTGG |
SLC6A1 |
ENSG00000157103 |
-0.25883351035120494 |
[376] |
[165] |
-2 |
hSpCas9 |
negative selection |
11423416 |
11022345 |
11022368 |
3 |
+ |
28162770 |
EOL1 |
viability |
GCATCAGATGACGGACGGGCTGG |
SLC6A1 |
ENSG00000157103 |
0.19360596503209837 |
[238] |
[143] |
1 |
hSpCas9 |
negative selection |
11423417 |
11022410 |
11022433 |
3 |
- |
28162770 |
EOL1 |
viability |
ATACACAAGGATCCAGGCGATGG |
SLC6A1 |
ENSG00000157103 |
0.8994567906077038 |
[57] |
[56] |
7 |
hSpCas9 |
negative selection |
11423418 |
11028745 |
11028768 |
3 |
+ |
28162770 |
EOL1 |
viability |
GGCGTTCCTGGCATACCCAGAGG |
SLC6A1 |
ENSG00000157103 |
0.03442538934290784 |
[416] |
[224] |
0 |
hSpCas9 |
negative selection |
11423419 |
11028789 |
11028812 |
3 |
- |
28162770 |
EOL1 |
viability |
GAAGAGGATGGCCCAGAGTGGGG |
SLC6A1 |
ENSG00000157103 |
0.7670064945840547 |
[318] |
[285] |
6 |
hSpCas9 |
negative selection |
11423420 |
11029232 |
11029255 |
3 |
+ |
28162770 |
EOL1 |
viability |
GGAGGGCTTCATCACAGCCCTGG |
SLC6A1 |
ENSG00000157103 |
2.137541494904733 |
[373] |
[866] |
9 |
hSpCas9 |
negative selection |
11423421 |
11029274 |
11029297 |
3 |
- |
28162770 |
EOL1 |
viability |
AGAGCTCTCTGCGGTTGCGGAGG |
SLC6A1 |
ENSG00000157103 |
0.4253498246276921 |
[399] |
[282] |
4 |
hSpCas9 |
negative selection |
11423422 |
11034571 |
11034594 |
3 |
- |
28162770 |
MOLM13 |
viability |
GGGGAAAACATAGTTTCCCATGG |
SLC6A1 |
ENSG00000157103 |
0.6981870009663731 |
[51] |
[60] |
5 |
hSpCas9 |
negative selection |
11592780 |
11020202 |
11020225 |
3 |
+ |
28162770 |
MOLM13 |
viability |
TGTCCTTGCAGACACTGCCGTGG |
SLC6A1 |
ENSG00000157103 |
0.7184759531155713 |
[484] |
[576] |
5 |
hSpCas9 |
negative selection |
11592781 |
11020298 |
11020321 |
3 |
- |
28162770 |
MOLM13 |
viability |
CCAGAACTCCACCACAGCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.6683539639462741 |
[321] |
[369] |
5 |
hSpCas9 |
negative selection |
11592782 |
11022345 |
11022368 |
3 |
+ |
28162770 |
MOLM13 |
viability |
GCATCAGATGACGGACGGGCTGG |
SLC6A1 |
ENSG00000157103 |
0.830459460929287 |
[188] |
[242] |
6 |
hSpCas9 |
negative selection |
11592783 |
11022410 |
11022433 |
3 |
- |
28162770 |
MOLM13 |
viability |
ATACACAAGGATCCAGGCGATGG |
SLC6A1 |
ENSG00000157103 |
0.8869737138861243 |
[88] |
[118] |
6 |
hSpCas9 |
negative selection |
11592784 |
11028745 |
11028768 |
3 |
+ |
28162770 |
MOLM13 |
viability |
GGCGTTCCTGGCATACCCAGAGG |
SLC6A1 |
ENSG00000157103 |
-0.18754632712502906 |
[429] |
[272] |
-1 |
hSpCas9 |
negative selection |
11592785 |
11028789 |
11028812 |
3 |
- |
28162770 |
MOLM13 |
viability |
GAAGAGGATGGCCCAGAGTGGGG |
SLC6A1 |
ENSG00000157103 |
-0.4166334010354853 |
[335] |
[181] |
-2 |
hSpCas9 |
negative selection |
11592786 |
11029232 |
11029255 |
3 |
+ |
28162770 |
MOLM13 |
viability |
GGAGGGCTTCATCACAGCCCTGG |
SLC6A1 |
ENSG00000157103 |
-0.03534872174212367 |
[325] |
[229] |
0 |
hSpCas9 |
negative selection |
11592787 |
11029274 |
11029297 |
3 |
- |
28162770 |
MOLM13 |
viability |
AGAGCTCTCTGCGGTTGCGGAGG |
SLC6A1 |
ENSG00000157103 |
0.9037186824284743 |
[464] |
[628] |
7 |
hSpCas9 |
negative selection |
11592788 |
11034571 |
11034594 |
3 |
- |
28162770 |
HEL |
viability |
GGGGAAAACATAGTTTCCCATGG |
SLC6A1 |
ENSG00000157103 |
0.6900445467787137 |
[29] |
[30] |
6 |
hSpCas9 |
negative selection |
11762146 |
11020202 |
11020225 |
3 |
+ |
28162770 |
HEL |
viability |
TGTCCTTGCAGACACTGCCGTGG |
SLC6A1 |
ENSG00000157103 |
0.31461890339872634 |
[466] |
[371] |
2 |
hSpCas9 |
negative selection |
11762147 |
11020298 |
11020321 |
3 |
- |
28162770 |
HEL |
viability |
CCAGAACTCCACCACAGCGCTGG |
SLC6A1 |
ENSG00000157103 |
-0.3962552996155069 |
[299] |
[145] |
-3 |
hSpCas9 |
negative selection |
11762148 |
11022345 |
11022368 |
3 |
+ |
28162770 |
HEL |
viability |
GCATCAGATGACGGACGGGCTGG |
SLC6A1 |
ENSG00000157103 |
0.5733651289596949 |
[212] |
[202] |
5 |
hSpCas9 |
negative selection |
11762149 |
11022410 |
11022433 |
3 |
- |
28162770 |
HEL |
viability |
ATACACAAGGATCCAGGCGATGG |
SLC6A1 |
ENSG00000157103 |
-0.45679684155055744 |
[59] |
[27] |
-3 |
hSpCas9 |
negative selection |
11762150 |
11028745 |
11028768 |
3 |
+ |
28162770 |
HEL |
viability |
GGCGTTCCTGGCATACCCAGAGG |
SLC6A1 |
ENSG00000157103 |
-0.5446611359965857 |
[352] |
[154] |
-4 |
hSpCas9 |
negative selection |
11762151 |
11028789 |
11028812 |
3 |
- |
28162770 |
HEL |
viability |
GAAGAGGATGGCCCAGAGTGGGG |
SLC6A1 |
ENSG00000157103 |
0.2227006516631468 |
[288] |
[215] |
1 |
hSpCas9 |
negative selection |
11762152 |
11029232 |
11029255 |
3 |
+ |
28162770 |
HEL |
viability |
GGAGGGCTTCATCACAGCCCTGG |
SLC6A1 |
ENSG00000157103 |
0.9820490051159558 |
[263] |
[333] |
8 |
hSpCas9 |
negative selection |
11762153 |
11029274 |
11029297 |
3 |
- |
28162770 |
HEL |
viability |
AGAGCTCTCTGCGGTTGCGGAGG |
SLC6A1 |
ENSG00000157103 |
0.05567786539520314 |
[343] |
[228] |
0 |
hSpCas9 |
negative selection |
11762154 |
11034571 |
11034594 |
3 |
- |
28162770 |
MV411 |
viability |
GGGGAAAACATAGTTTCCCATGG |
SLC6A1 |
ENSG00000157103 |
0.44008262872517134 |
[27] |
[31] |
4 |
hSpCas9 |
negative selection |
11931512 |
11020202 |
11020225 |
3 |
+ |
28162770 |
MV411 |
viability |
TGTCCTTGCAGACACTGCCGTGG |
SLC6A1 |
ENSG00000157103 |
0.5312305167833665 |
[321] |
[391] |
5 |
hSpCas9 |
negative selection |
11931513 |
11020298 |
11020321 |
3 |
- |
28162770 |
MV411 |
viability |
CCAGAACTCCACCACAGCGCTGG |
SLC6A1 |
ENSG00000157103 |
-0.05212273107613277 |
[223] |
[181] |
0 |
hSpCas9 |
negative selection |
11931514 |
11022345 |
11022368 |
3 |
+ |
28162770 |
MV411 |
viability |
GCATCAGATGACGGACGGGCTGG |
SLC6A1 |
ENSG00000157103 |
0.44537692839468424 |
[169] |
[194] |
4 |
hSpCas9 |
negative selection |
11931515 |
11022410 |
11022433 |
3 |
- |
28162770 |
MV411 |
viability |
ATACACAAGGATCCAGGCGATGG |
SLC6A1 |
ENSG00000157103 |
0.9302473749020761 |
[37] |
[60] |
8 |
hSpCas9 |
negative selection |
11931516 |
11028745 |
11028768 |
3 |
+ |
28162770 |
MV411 |
viability |
GGCGTTCCTGGCATACCCAGAGG |
SLC6A1 |
ENSG00000157103 |
-1.3330235577034402 |
[319] |
[106] |
-7 |
hSpCas9 |
negative selection |
11931517 |
11028789 |
11028812 |
3 |
- |
28162770 |
MV411 |
viability |
GAAGAGGATGGCCCAGAGTGGGG |
SLC6A1 |
ENSG00000157103 |
-0.1089240411684611 |
[264] |
[206] |
-1 |
hSpCas9 |
negative selection |
11931518 |
11029232 |
11029255 |
3 |
+ |
28162770 |
MV411 |
viability |
GGAGGGCTTCATCACAGCCCTGG |
SLC6A1 |
ENSG00000157103 |
0.8443726931700075 |
[239] |
[362] |
7 |
hSpCas9 |
negative selection |
11931519 |
11029274 |
11029297 |
3 |
- |
28162770 |
MV411 |
viability |
AGAGCTCTCTGCGGTTGCGGAGG |
SLC6A1 |
ENSG00000157103 |
-0.002315333945665299 |
[345] |
[290] |
0 |
hSpCas9 |
negative selection |
11931520 |
11034571 |
11034594 |
3 |
- |
28162770 |
MONOMAC1 |
viability |
GGGGAAAACATAGTTTCCCATGG |
SLC6A1 |
ENSG00000157103 |
1.8733524808318442 |
[9] |
[41] |
9 |
hSpCas9 |
negative selection |
12100878 |
11020202 |
11020225 |
3 |
+ |
28162770 |
MONOMAC1 |
viability |
TGTCCTTGCAGACACTGCCGTGG |
SLC6A1 |
ENSG00000157103 |
0.27551311087449815 |
[208] |
[289] |
2 |
hSpCas9 |
negative selection |
12100879 |
11020298 |
11020321 |
3 |
- |
28162770 |
MONOMAC1 |
viability |
CCAGAACTCCACCACAGCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.15176695381920355 |
[116] |
[148] |
1 |
hSpCas9 |
negative selection |
12100880 |
11022345 |
11022368 |
3 |
+ |
28162770 |
MONOMAC1 |
viability |
GCATCAGATGACGGACGGGCTGG |
SLC6A1 |
ENSG00000157103 |
0.9801561548467979 |
[87] |
[198] |
8 |
hSpCas9 |
negative selection |
12100881 |
11022410 |
11022433 |
3 |
- |
28162770 |
MONOMAC1 |
viability |
ATACACAAGGATCCAGGCGATGG |
SLC6A1 |
ENSG00000157103 |
1.8029631529404464 |
[13] |
[55] |
9 |
hSpCas9 |
negative selection |
12100882 |
11028745 |
11028768 |
3 |
+ |
28162770 |
MONOMAC1 |
viability |
GGCGTTCCTGGCATACCCAGAGG |
SLC6A1 |
ENSG00000157103 |
-0.339548491527306 |
[201] |
[182] |
-3 |
hSpCas9 |
negative selection |
12100883 |
11028789 |
11028812 |
3 |
- |
28162770 |
MONOMAC1 |
viability |
GAAGAGGATGGCCCAGAGTGGGG |
SLC6A1 |
ENSG00000157103 |
0.8146449579880818 |
[122] |
[247] |
7 |
hSpCas9 |
negative selection |
12100884 |
11029232 |
11029255 |
3 |
+ |
28162770 |
MONOMAC1 |
viability |
GGAGGGCTTCATCACAGCCCTGG |
SLC6A1 |
ENSG00000157103 |
0.34043672788028323 |
[174] |
[253] |
3 |
hSpCas9 |
negative selection |
12100885 |
11029274 |
11029297 |
3 |
- |
28162770 |
MONOMAC1 |
viability |
AGAGCTCTCTGCGGTTGCGGAGG |
SLC6A1 |
ENSG00000157103 |
0.32884642090758043 |
[215] |
[310] |
3 |
hSpCas9 |
negative selection |
12100886 |
11034571 |
11034594 |
3 |
- |
28162770 |
OCIAML2 |
viability |
GGGGAAAACATAGTTTCCCATGG |
SLC6A1 |
ENSG00000157103 |
0.11433267547899506 |
[6] |
[41] |
1 |
hSpCas9 |
negative selection |
12270244 |
11020202 |
11020225 |
3 |
+ |
28162770 |
OCIAML2 |
viability |
TGTCCTTGCAGACACTGCCGTGG |
SLC6A1 |
ENSG00000157103 |
0.17999959312798985 |
[67] |
[426] |
1 |
hSpCas9 |
negative selection |
12270245 |
11020298 |
11020321 |
3 |
- |
28162770 |
OCIAML2 |
viability |
CCAGAACTCCACCACAGCGCTGG |
SLC6A1 |
ENSG00000157103 |
0.30095396579362094 |
[34] |
[238] |
3 |
hSpCas9 |
negative selection |
12270246 |
11022345 |
11022368 |
3 |
+ |
28162770 |
OCIAML2 |
viability |
GCATCAGATGACGGACGGGCTGG |
SLC6A1 |
ENSG00000157103 |
0.5164311190503406 |
[27] |
[221] |
5 |
hSpCas9 |
negative selection |
12270247 |
11022410 |
11022433 |
3 |
- |
28162770 |
OCIAML2 |
viability |
ATACACAAGGATCCAGGCGATGG |
SLC6A1 |
ENSG00000157103 |
0.6723281285998817 |
[5] |
[52] |
6 |
hSpCas9 |
negative selection |
12270248 |
11028745 |
11028768 |
3 |
+ |
28162770 |
OCIAML2 |
viability |
GGCGTTCCTGGCATACCCAGAGG |
SLC6A1 |
ENSG00000157103 |
-0.12748524444510306 |
[53] |
[273] |
-1 |
hSpCas9 |
negative selection |
12270249 |
11028789 |
11028812 |
3 |
- |
28162770 |
OCIAML2 |
viability |
GAAGAGGATGGCCCAGAGTGGGG |
SLC6A1 |
ENSG00000157103 |
0.7931953150816329 |
[37] |
[364] |
7 |
hSpCas9 |
negative selection |
12270250 |
11029232 |
11029255 |
3 |
+ |
28162770 |
OCIAML2 |
viability |
GGAGGGCTTCATCACAGCCCTGG |
SLC6A1 |
ENSG00000157103 |
0.6236062446036046 |
[49] |
[426] |
6 |
hSpCas9 |
negative selection |
12270251 |
11029274 |
11029297 |
3 |
- |
28162770 |
OCIAML2 |
viability |
AGAGCTCTCTGCGGTTGCGGAGG |
SLC6A1 |
ENSG00000157103 |
-0.18992439308131182 |
[70] |
[344] |
-1 |
hSpCas9 |
negative selection |
12270252 |
11034571 |
11034594 |
3 |
- |
28162770 |
OCIAML3 |
viability |
GGGGAAAACATAGTTTCCCATGG |
SLC6A1 |
ENSG00000157103 |
-0.31389972113142806 |
[6] |
[16] |
-2 |
hSpCas9 |
negative selection |
12439610 |
11020202 |
11020225 |
3 |
+ |
28162770 |
OCIAML3 |
viability |
TGTCCTTGCAGACACTGCCGTGG |
SLC6A1 |
ENSG00000157103 |
0.8311257366901874 |
[88] |
[477] |
7 |
hSpCas9 |
negative selection |
12439611 |
11020298 |
11020321 |
3 |
- |
28162770 |
OCIAML3 |
viability |
CCAGAACTCCACCACAGCGCTGG |
SLC6A1 |
ENSG00000157103 |
-0.3309732344903695 |
[39] |
[95] |
-3 |
hSpCas9 |
negative selection |
12439612 |
11022345 |
11022368 |
3 |
+ |
28162770 |
OCIAML3 |
viability |
GCATCAGATGACGGACGGGCTGG |
SLC6A1 |
ENSG00000157103 |
0.15855480889306148 |
[45] |
[154] |
1 |
hSpCas9 |
negative selection |
12439613 |
11022410 |
11022433 |
3 |
- |
28162770 |
OCIAML3 |
viability |
ATACACAAGGATCCAGGCGATGG |
SLC6A1 |
ENSG00000157103 |
0.13181739623684252 |
[12] |
[42] |
1 |
hSpCas9 |
negative selection |
12439614 |
11028745 |
11028768 |
3 |
+ |
28162770 |
OCIAML3 |
viability |
GGCGTTCCTGGCATACCCAGAGG |
SLC6A1 |
ENSG00000157103 |
0.43890698214857204 |
[64] |
[265] |
4 |
hSpCas9 |
negative selection |
12439615 |
11028789 |
11028812 |
3 |
- |
28162770 |
OCIAML3 |
viability |
GAAGAGGATGGCCCAGAGTGGGG |
SLC6A1 |
ENSG00000157103 |
0.1978841643456365 |
[66] |
[231] |
2 |
hSpCas9 |
negative selection |
12439616 |
11029232 |
11029255 |
3 |
+ |
28162770 |
OCIAML3 |
viability |
GGAGGGCTTCATCACAGCCCTGG |
SLC6A1 |
ENSG00000157103 |
-0.046039347085208404 |
[78] |
[230] |
0 |
hSpCas9 |
negative selection |
12439617 |
11029274 |
11029297 |
3 |
- |
28162770 |
OCIAML3 |
viability |
AGAGCTCTCTGCGGTTGCGGAGG |
SLC6A1 |
ENSG00000157103 |
0.10844842341543348 |
[109] |
[357] |
1 |
hSpCas9 |
negative selection |
12439618 |