| 89963227 |
89963250 |
14 |
+ |
26472758 |
Jiyoye |
viability |
AAGGAGCAGCAAATGAGCCCAGG |
TDP1 |
ENSG00000042088 |
6.2651563766334455 |
[0] |
[57] |
9 |
hSpCas9 |
negative selection |
163569 |
89980610 |
89980633 |
14 |
+ |
26472758 |
Jiyoye |
viability |
GACTGGCACCAGAAAACTCAAGG |
TDP1 |
ENSG00000042088 |
0.4071753815058736 |
[19] |
[19] |
3 |
hSpCas9 |
negative selection |
163570 |
89963543 |
89963566 |
14 |
+ |
26472758 |
Jiyoye |
viability |
CGAGTATGAGACATCAGGGGAGG |
TDP1 |
ENSG00000042088 |
0.9153222851761986 |
[89] |
[127] |
6 |
hSpCas9 |
negative selection |
163571 |
89980570 |
89980593 |
14 |
- |
26472758 |
Jiyoye |
viability |
AGGTGTGTATGACAACCCGGAGG |
TDP1 |
ENSG00000042088 |
-1.251316154637248 |
[160] |
[50] |
-7 |
hSpCas9 |
negative selection |
163572 |
89989027 |
89989050 |
14 |
+ |
26472758 |
Jiyoye |
viability |
GAGCATGCTGACACTGGGGAAGG |
TDP1 |
ENSG00000042088 |
-0.2679044139115998 |
[288] |
[180] |
-2 |
hSpCas9 |
negative selection |
163573 |
89993400 |
89993423 |
14 |
- |
26472758 |
Jiyoye |
viability |
TATGTGGCATGGCATTGCTGCGG |
TDP1 |
ENSG00000042088 |
-1.081760231441507 |
[246] |
[87] |
-6 |
hSpCas9 |
negative selection |
163574 |
90019376 |
90019399 |
14 |
- |
26472758 |
Jiyoye |
viability |
GGACCCCGAGCTCGTAGGAGCGG |
TDP1 |
ENSG00000042088 |
-0.5816840608889261 |
[128] |
[64] |
-4 |
hSpCas9 |
negative selection |
163575 |
89963342 |
89963365 |
14 |
+ |
26472758 |
Jiyoye |
viability |
GCAGAAAAGCGGTTCCCAGGAGG |
TDP1 |
ENSG00000042088 |
0.13621405990045077 |
[145] |
[120] |
1 |
hSpCas9 |
negative selection |
163576 |
89963663 |
89963686 |
14 |
- |
26472758 |
Jiyoye |
viability |
GCATCCTCTTACCCTTGATGTGG |
TDP1 |
ENSG00000042088 |
0.34793617813119737 |
[173] |
[166] |
2 |
hSpCas9 |
negative selection |
163577 |
89980597 |
89980620 |
14 |
- |
26472758 |
Jiyoye |
viability |
GGTGCCAGTCAGCATGGATGAGG |
TDP1 |
ENSG00000042088 |
-0.5693656456701377 |
[121] |
[61] |
-4 |
hSpCas9 |
negative selection |
163578 |
89963227 |
89963250 |
14 |
+ |
26472758 |
KBM7 |
viability |
AAGGAGCAGCAAATGAGCCCAGG |
TDP1 |
ENSG00000042088 |
1.0727062054779313 |
[282,165] |
[156,270] |
9 |
hSpCas9 |
negative selection |
354687 |
89980610 |
89980633 |
14 |
+ |
26472758 |
KBM7 |
viability |
GACTGGCACCAGAAAACTCAAGG |
TDP1 |
ENSG00000042088 |
0.529699576673138 |
[168,143] |
[60,145] |
6 |
hSpCas9 |
negative selection |
354688 |
89963543 |
89963566 |
14 |
+ |
26472758 |
KBM7 |
viability |
CGAGTATGAGACATCAGGGGAGG |
TDP1 |
ENSG00000042088 |
0.16503447842356997 |
[732,381] |
[278,291] |
1 |
hSpCas9 |
negative selection |
354689 |
89980570 |
89980593 |
14 |
- |
26472758 |
KBM7 |
viability |
AGGTGTGTATGACAACCCGGAGG |
TDP1 |
ENSG00000042088 |
0.8531496458961857 |
[248,164] |
[181,164] |
8 |
hSpCas9 |
negative selection |
354690 |
89989027 |
89989050 |
14 |
+ |
26472758 |
KBM7 |
viability |
GAGCATGCTGACACTGGGGAAGG |
TDP1 |
ENSG00000042088 |
0.014084091033580104 |
[818,648] |
[542,169] |
0 |
hSpCas9 |
negative selection |
354691 |
89993400 |
89993423 |
14 |
- |
26472758 |
KBM7 |
viability |
TATGTGGCATGGCATTGCTGCGG |
TDP1 |
ENSG00000042088 |
0.7005715734201583 |
[631,651] |
[696,311] |
7 |
hSpCas9 |
negative selection |
354692 |
90019376 |
90019399 |
14 |
- |
26472758 |
KBM7 |
viability |
GGACCCCGAGCTCGTAGGAGCGG |
TDP1 |
ENSG00000042088 |
0.35870094078630355 |
[246,289] |
[182,146] |
4 |
hSpCas9 |
negative selection |
354693 |
89963342 |
89963365 |
14 |
+ |
26472758 |
KBM7 |
viability |
GCAGAAAAGCGGTTCCCAGGAGG |
TDP1 |
ENSG00000042088 |
0.1755546722665018 |
[610,388] |
[264,256] |
1 |
hSpCas9 |
negative selection |
354694 |
89963663 |
89963686 |
14 |
- |
26472758 |
KBM7 |
viability |
GCATCCTCTTACCCTTGATGTGG |
TDP1 |
ENSG00000042088 |
0.10983698389094387 |
[1123,1354] |
[619,653] |
1 |
hSpCas9 |
negative selection |
354695 |
89980597 |
89980620 |
14 |
- |
26472758 |
KBM7 |
viability |
GGTGCCAGTCAGCATGGATGAGG |
TDP1 |
ENSG00000042088 |
1.01381932809203 |
[349,300] |
[323,293] |
9 |
hSpCas9 |
negative selection |
354696 |
89963227 |
89963250 |
14 |
+ |
26472758 |
Raji |
viability |
AAGGAGCAGCAAATGAGCCCAGG |
TDP1 |
ENSG00000042088 |
0.3444227326744488 |
[111] |
[32] |
3 |
hSpCas9 |
negative selection |
545805 |
89980610 |
89980633 |
14 |
+ |
26472758 |
Raji |
viability |
GACTGGCACCAGAAAACTCAAGG |
TDP1 |
ENSG00000042088 |
-0.018147346710259082 |
[47] |
[10] |
0 |
hSpCas9 |
negative selection |
545806 |
89963543 |
89963566 |
14 |
+ |
26472758 |
Raji |
viability |
CGAGTATGAGACATCAGGGGAGG |
TDP1 |
ENSG00000042088 |
0.3118540487127851 |
[242] |
[69] |
3 |
hSpCas9 |
negative selection |
545807 |
89980570 |
89980593 |
14 |
- |
26472758 |
Raji |
viability |
AGGTGTGTATGACAACCCGGAGG |
TDP1 |
ENSG00000042088 |
0.046501293226577034 |
[120] |
[28] |
0 |
hSpCas9 |
negative selection |
545808 |
89989027 |
89989050 |
14 |
+ |
26472758 |
Raji |
viability |
GAGCATGCTGACACTGGGGAAGG |
TDP1 |
ENSG00000042088 |
0.7400124697250701 |
[257] |
[99] |
7 |
hSpCas9 |
negative selection |
545809 |
89993400 |
89993423 |
14 |
- |
26472758 |
Raji |
viability |
TATGTGGCATGGCATTGCTGCGG |
TDP1 |
ENSG00000042088 |
0.7720349247239155 |
[269] |
[106] |
7 |
hSpCas9 |
negative selection |
545810 |
90019376 |
90019399 |
14 |
- |
26472758 |
Raji |
viability |
GGACCCCGAGCTCGTAGGAGCGG |
TDP1 |
ENSG00000042088 |
0.0986133257458674 |
[164] |
[40] |
0 |
hSpCas9 |
negative selection |
545811 |
89963342 |
89963365 |
14 |
+ |
26472758 |
Raji |
viability |
GCAGAAAAGCGGTTCCCAGGAGG |
TDP1 |
ENSG00000042088 |
-0.2593987952980232 |
[293] |
[56] |
-2 |
hSpCas9 |
negative selection |
545812 |
89963663 |
89963686 |
14 |
- |
26472758 |
Raji |
viability |
GCATCCTCTTACCCTTGATGTGG |
TDP1 |
ENSG00000042088 |
-0.46293218938315517 |
[587] |
[98] |
-4 |
hSpCas9 |
negative selection |
545813 |
89980597 |
89980620 |
14 |
- |
26472758 |
Raji |
viability |
GGTGCCAGTCAGCATGGATGAGG |
TDP1 |
ENSG00000042088 |
0.41932754168833986 |
[202] |
[62] |
4 |
hSpCas9 |
negative selection |
545814 |
89963227 |
89963250 |
14 |
+ |
26472758 |
K562 |
viability |
AAGGAGCAGCAAATGAGCCCAGG |
TDP1 |
ENSG00000042088 |
-0.25515228182406446 |
[204] |
[144] |
-2 |
hSpCas9 |
negative selection |
736923 |
89980610 |
89980633 |
14 |
+ |
26472758 |
K562 |
viability |
GACTGGCACCAGAAAACTCAAGG |
TDP1 |
ENSG00000042088 |
1.252154376446052 |
[92] |
[186] |
9 |
hSpCas9 |
negative selection |
736924 |
89963543 |
89963566 |
14 |
+ |
26472758 |
K562 |
viability |
CGAGTATGAGACATCAGGGGAGG |
TDP1 |
ENSG00000042088 |
0.9574090489823126 |
[448] |
[735] |
7 |
hSpCas9 |
negative selection |
736925 |
89980570 |
89980593 |
14 |
- |
26472758 |
K562 |
viability |
AGGTGTGTATGACAACCCGGAGG |
TDP1 |
ENSG00000042088 |
0.9709353726016224 |
[193] |
[320] |
7 |
hSpCas9 |
negative selection |
736926 |
89989027 |
89989050 |
14 |
+ |
26472758 |
K562 |
viability |
GAGCATGCTGACACTGGGGAAGG |
TDP1 |
ENSG00000042088 |
0.47001121325220696 |
[578] |
[676] |
4 |
hSpCas9 |
negative selection |
736927 |
89993400 |
89993423 |
14 |
- |
26472758 |
K562 |
viability |
TATGTGGCATGGCATTGCTGCGG |
TDP1 |
ENSG00000042088 |
0.09082237614572952 |
[603] |
[542] |
0 |
hSpCas9 |
negative selection |
736928 |
90019376 |
90019399 |
14 |
- |
26472758 |
K562 |
viability |
GGACCCCGAGCTCGTAGGAGCGG |
TDP1 |
ENSG00000042088 |
1.354043218840945 |
[265] |
[573] |
9 |
hSpCas9 |
negative selection |
736929 |
89963342 |
89963365 |
14 |
+ |
26472758 |
K562 |
viability |
GCAGAAAAGCGGTTCCCAGGAGG |
TDP1 |
ENSG00000042088 |
0.0459835615205379 |
[427] |
[372] |
0 |
hSpCas9 |
negative selection |
736930 |
89963663 |
89963686 |
14 |
- |
26472758 |
K562 |
viability |
GCATCCTCTTACCCTTGATGTGG |
TDP1 |
ENSG00000042088 |
0.6498527751758951 |
[828] |
[1097] |
5 |
hSpCas9 |
negative selection |
736931 |
89980597 |
89980620 |
14 |
- |
26472758 |
K562 |
viability |
GGTGCCAGTCAGCATGGATGAGG |
TDP1 |
ENSG00000042088 |
0.32616187710798344 |
[222] |
[235] |
2 |
hSpCas9 |
negative selection |
736932 |
89963122 |
89963145 |
14 |
+ |
26627737 |
DLD1 |
viability |
AGGAAGGCGATTATGGGAGGTGG |
TDP1 |
ENSG00000042088 |
0.7864408618840878 |
[232] |
[139,184,63] |
7 |
hSpCas9 |
negative selection |
789675 |
89967371 |
89967394 |
14 |
+ |
26627737 |
DLD1 |
viability |
ACTACTGCTTTGACGTGGACTGG |
TDP1 |
ENSG00000042088 |
-0.486052574765905 |
[277] |
[73,51,59] |
-5 |
hSpCas9 |
negative selection |
789676 |
89971229 |
89971252 |
14 |
- |
26627737 |
DLD1 |
viability |
CGTAAGGCTTGGCCTGGGCATGG |
TDP1 |
ENSG00000042088 |
0.6390826046296081 |
[818] |
[326,383,472] |
6 |
hSpCas9 |
negative selection |
789677 |
89980573 |
89980596 |
14 |
- |
26627737 |
DLD1 |
viability |
TGGAGGTGTGTATGACAACCCGG |
TDP1 |
ENSG00000042088 |
0.6136112622771455 |
[975] |
[607,412,388] |
6 |
hSpCas9 |
negative selection |
789678 |
89984627 |
89984650 |
14 |
- |
26627737 |
DLD1 |
viability |
CTATCCACTCCTTGAGAGAAGGG |
TDP1 |
ENSG00000042088 |
0.41959736747813814 |
[675] |
[123,440,288] |
4 |
hSpCas9 |
negative selection |
789679 |
89988916 |
89988939 |
14 |
- |
26627737 |
DLD1 |
viability |
CGTTAGGCATGGATGAGGCATGG |
TDP1 |
ENSG00000042088 |
0.1521660511357814 |
[1000] |
[641,269,156] |
1 |
hSpCas9 |
negative selection |
789680 |
89963122 |
89963145 |
14 |
+ |
26627737 |
GBM cells |
viability after 5 days |
AGGAAGGCGATTATGGGAGGTGG |
TDP1 |
ENSG00000042088 |
0.25613071977618707 |
[209] |
[145,122] |
4 |
hSpCas9 |
negative selection |
871990 |
89967371 |
89967394 |
14 |
+ |
26627737 |
GBM cells |
viability after 5 days |
ACTACTGCTTTGACGTGGACTGG |
TDP1 |
ENSG00000042088 |
0.23274405882933963 |
[168] |
[132,79] |
3 |
hSpCas9 |
negative selection |
871991 |
89971229 |
89971252 |
14 |
- |
26627737 |
GBM cells |
viability after 5 days |
CGTAAGGCTTGGCCTGGGCATGG |
TDP1 |
ENSG00000042088 |
0.22686575740081782 |
[477] |
[337,261] |
3 |
hSpCas9 |
negative selection |
871992 |
89980573 |
89980596 |
14 |
- |
26627737 |
GBM cells |
viability after 5 days |
TGGAGGTGTGTATGACAACCCGG |
TDP1 |
ENSG00000042088 |
0.04173364616540021 |
[393] |
[207,226] |
0 |
hSpCas9 |
negative selection |
871993 |
89984627 |
89984650 |
14 |
- |
26627737 |
GBM cells |
viability after 5 days |
CTATCCACTCCTTGAGAGAAGGG |
TDP1 |
ENSG00000042088 |
-0.11081766313208785 |
[594] |
[276,313] |
-2 |
hSpCas9 |
negative selection |
871994 |
89988916 |
89988939 |
14 |
- |
26627737 |
GBM cells |
viability after 5 days |
CGTTAGGCATGGATGAGGCATGG |
TDP1 |
ENSG00000042088 |
-0.3940074067220639 |
[516] |
[159,261] |
-6 |
hSpCas9 |
negative selection |
871995 |
89963122 |
89963145 |
14 |
+ |
26627737 |
GBM cells |
viability after 13 days |
AGGAAGGCGATTATGGGAGGTGG |
TDP1 |
ENSG00000042088 |
0.8420498740580082 |
[209] |
[222,188] |
8 |
hSpCas9 |
negative selection |
954305 |
89967371 |
89967394 |
14 |
+ |
26627737 |
GBM cells |
viability after 13 days |
ACTACTGCTTTGACGTGGACTGG |
TDP1 |
ENSG00000042088 |
-0.1063932668708707 |
[168] |
[93,77] |
-1 |
hSpCas9 |
negative selection |
954306 |
89971229 |
89971252 |
14 |
- |
26627737 |
GBM cells |
viability after 13 days |
CGTAAGGCTTGGCCTGGGCATGG |
TDP1 |
ENSG00000042088 |
0.24895248333344122 |
[477] |
[289,322] |
3 |
hSpCas9 |
negative selection |
954307 |
89980573 |
89980596 |
14 |
- |
26627737 |
GBM cells |
viability after 13 days |
TGGAGGTGTGTATGACAACCCGG |
TDP1 |
ENSG00000042088 |
-0.1982826331000963 |
[393] |
[214,162] |
-2 |
hSpCas9 |
negative selection |
954308 |
89984627 |
89984650 |
14 |
- |
26627737 |
GBM cells |
viability after 13 days |
CTATCCACTCCTTGAGAGAAGGG |
TDP1 |
ENSG00000042088 |
0.052836131225520555 |
[594] |
[437,250] |
0 |
hSpCas9 |
negative selection |
954309 |
89988916 |
89988939 |
14 |
- |
26627737 |
GBM cells |
viability after 13 days |
CGTTAGGCATGGATGAGGCATGG |
TDP1 |
ENSG00000042088 |
-0.6511865341367535 |
[516] |
[171,183] |
-6 |
hSpCas9 |
negative selection |
954310 |
89963122 |
89963145 |
14 |
+ |
26627737 |
GBM cells |
viability after 21 days |
AGGAAGGCGATTATGGGAGGTGG |
TDP1 |
ENSG00000042088 |
0.17223592961471335 |
[209] |
[138,118] |
1 |
hSpCas9 |
negative selection |
1036620 |
89967371 |
89967394 |
14 |
+ |
26627737 |
GBM cells |
viability after 21 days |
ACTACTGCTTTGACGTGGACTGG |
TDP1 |
ENSG00000042088 |
-0.6965006103676412 |
[168] |
[52,59] |
-6 |
hSpCas9 |
negative selection |
1036621 |
89971229 |
89971252 |
14 |
- |
26627737 |
GBM cells |
viability after 21 days |
CGTAAGGCTTGGCCTGGGCATGG |
TDP1 |
ENSG00000042088 |
0.4605380405945173 |
[477] |
[360,353] |
5 |
hSpCas9 |
negative selection |
1036622 |
89980573 |
89980596 |
14 |
- |
26627737 |
GBM cells |
viability after 21 days |
TGGAGGTGTGTATGACAACCCGG |
TDP1 |
ENSG00000042088 |
0.06130803887053149 |
[393] |
[226,219] |
0 |
hSpCas9 |
negative selection |
1036623 |
89984627 |
89984650 |
14 |
- |
26627737 |
GBM cells |
viability after 21 days |
CTATCCACTCCTTGAGAGAAGGG |
TDP1 |
ENSG00000042088 |
-0.30107192967759033 |
[594] |
[288,237] |
-3 |
hSpCas9 |
negative selection |
1036624 |
89988916 |
89988939 |
14 |
- |
26627737 |
GBM cells |
viability after 21 days |
CGTTAGGCATGGATGAGGCATGG |
TDP1 |
ENSG00000042088 |
-0.49482841724748194 |
[516] |
[226,173] |
-4 |
hSpCas9 |
negative selection |
1036625 |
89963122 |
89963145 |
14 |
+ |
26627737 |
RPE1 |
viability after 9 days |
AGGAAGGCGATTATGGGAGGTGG |
TDP1 |
ENSG00000042088 |
-0.30360828420887453 |
[730] |
[239,114] |
-2 |
hSpCas9 |
negative selection |
1118935 |
89967371 |
89967394 |
14 |
+ |
26627737 |
RPE1 |
viability after 9 days |
ACTACTGCTTTGACGTGGACTGG |
TDP1 |
ENSG00000042088 |
0.2703582878194165 |
[345] |
[79,195] |
2 |
hSpCas9 |
negative selection |
1118936 |
89971229 |
89971252 |
14 |
- |
26627737 |
RPE1 |
viability after 9 days |
CGTAAGGCTTGGCCTGGGCATGG |
TDP1 |
ENSG00000042088 |
0.20554704613863467 |
[1052] |
[294,489] |
1 |
hSpCas9 |
negative selection |
1118937 |
89980573 |
89980596 |
14 |
- |
26627737 |
RPE1 |
viability after 9 days |
TGGAGGTGTGTATGACAACCCGG |
TDP1 |
ENSG00000042088 |
-0.3469466734296114 |
[2800] |
[609,791] |
-2 |
hSpCas9 |
negative selection |
1118938 |
89984627 |
89984650 |
14 |
- |
26627737 |
RPE1 |
viability after 9 days |
CTATCCACTCCTTGAGAGAAGGG |
TDP1 |
ENSG00000042088 |
0.28961091867772115 |
[1516] |
[366,855] |
2 |
hSpCas9 |
negative selection |
1118939 |
89988916 |
89988939 |
14 |
- |
26627737 |
RPE1 |
viability after 9 days |
CGTTAGGCATGGATGAGGCATGG |
TDP1 |
ENSG00000042088 |
0.33855097841273163 |
[1786] |
[513,956] |
2 |
hSpCas9 |
negative selection |
1118940 |
89963122 |
89963145 |
14 |
+ |
26627737 |
RPE1 |
viability after 12 days |
AGGAAGGCGATTATGGGAGGTGG |
TDP1 |
ENSG00000042088 |
0.10270137361321466 |
[730] |
[308,106] |
0 |
hSpCas9 |
negative selection |
1201250 |
89967371 |
89967394 |
14 |
+ |
26627737 |
RPE1 |
viability after 12 days |
ACTACTGCTTTGACGTGGACTGG |
TDP1 |
ENSG00000042088 |
-0.3806646468218493 |
[345] |
[50,92] |
-3 |
hSpCas9 |
negative selection |
1201251 |
89971229 |
89971252 |
14 |
- |
26627737 |
RPE1 |
viability after 12 days |
CGTAAGGCTTGGCCTGGGCATGG |
TDP1 |
ENSG00000042088 |
0.36123629999417456 |
[1052] |
[308,420] |
2 |
hSpCas9 |
negative selection |
1201252 |
89980573 |
89980596 |
14 |
- |
26627737 |
RPE1 |
viability after 12 days |
TGGAGGTGTGTATGACAACCCGG |
TDP1 |
ENSG00000042088 |
-0.4938386588146786 |
[2800] |
[530,537] |
-3 |
hSpCas9 |
negative selection |
1201253 |
89984627 |
89984650 |
14 |
- |
26627737 |
RPE1 |
viability after 12 days |
CTATCCACTCCTTGAGAGAAGGG |
TDP1 |
ENSG00000042088 |
0.09946317124592463 |
[1516] |
[356,520] |
0 |
hSpCas9 |
negative selection |
1201254 |
89988916 |
89988939 |
14 |
- |
26627737 |
RPE1 |
viability after 12 days |
CGTTAGGCATGGATGAGGCATGG |
TDP1 |
ENSG00000042088 |
0.42709270621319484 |
[1786] |
[475,824] |
3 |
hSpCas9 |
negative selection |
1201255 |
89963122 |
89963145 |
14 |
+ |
26627737 |
RPE1 |
viability after 15 days |
AGGAAGGCGATTATGGGAGGTGG |
TDP1 |
ENSG00000042088 |
-0.37595833524242783 |
[730] |
[167,150] |
-2 |
hSpCas9 |
negative selection |
1283565 |
89967371 |
89967394 |
14 |
+ |
26627737 |
RPE1 |
viability after 15 days |
ACTACTGCTTTGACGTGGACTGG |
TDP1 |
ENSG00000042088 |
0.40629623770051837 |
[345] |
[173,86] |
2 |
hSpCas9 |
negative selection |
1283566 |
89971229 |
89971252 |
14 |
- |
26627737 |
RPE1 |
viability after 15 days |
CGTAAGGCTTGGCCTGGGCATGG |
TDP1 |
ENSG00000042088 |
0.06693460097651077 |
[1052] |
[282,339] |
0 |
hSpCas9 |
negative selection |
1283567 |
89980573 |
89980596 |
14 |
- |
26627737 |
RPE1 |
viability after 15 days |
TGGAGGTGTGTATGACAACCCGG |
TDP1 |
ENSG00000042088 |
-0.44743136472658485 |
[2800] |
[436,719] |
-3 |
hSpCas9 |
negative selection |
1283568 |
89984627 |
89984650 |
14 |
- |
26627737 |
RPE1 |
viability after 15 days |
CTATCCACTCCTTGAGAGAAGGG |
TDP1 |
ENSG00000042088 |
0.14097802867987363 |
[1516] |
[406,536] |
0 |
hSpCas9 |
negative selection |
1283569 |
89988916 |
89988939 |
14 |
- |
26627737 |
RPE1 |
viability after 15 days |
CGTTAGGCATGGATGAGGCATGG |
TDP1 |
ENSG00000042088 |
0.5459240746503806 |
[1786] |
[652,819] |
3 |
hSpCas9 |
negative selection |
1283570 |
89963122 |
89963145 |
14 |
+ |
26627737 |
RPE1 |
viability after 18 days |
AGGAAGGCGATTATGGGAGGTGG |
TDP1 |
ENSG00000042088 |
-0.24951426032030585 |
[730] |
[207,120] |
-1 |
hSpCas9 |
negative selection |
1365880 |
89967371 |
89967394 |
14 |
+ |
26627737 |
RPE1 |
viability after 18 days |
ACTACTGCTTTGACGTGGACTGG |
TDP1 |
ENSG00000042088 |
-0.4660693145530044 |
[345] |
[84,48] |
-3 |
hSpCas9 |
negative selection |
1365881 |
89971229 |
89971252 |
14 |
- |
26627737 |
RPE1 |
viability after 18 days |
CGTAAGGCTTGGCCTGGGCATGG |
TDP1 |
ENSG00000042088 |
0.16062646848936607 |
[1052] |
[379,250] |
1 |
hSpCas9 |
negative selection |
1365882 |
89980573 |
89980596 |
14 |
- |
26627737 |
RPE1 |
viability after 18 days |
TGGAGGTGTGTATGACAACCCGG |
TDP1 |
ENSG00000042088 |
-0.0230922013913617 |
[2800] |
[638,855] |
0 |
hSpCas9 |
negative selection |
1365883 |
89984627 |
89984650 |
14 |
- |
26627737 |
RPE1 |
viability after 18 days |
CTATCCACTCCTTGAGAGAAGGG |
TDP1 |
ENSG00000042088 |
0.029809359313301642 |
[1516] |
[386,450] |
0 |
hSpCas9 |
negative selection |
1365884 |
89988916 |
89988939 |
14 |
- |
26627737 |
RPE1 |
viability after 18 days |
CGTTAGGCATGGATGAGGCATGG |
TDP1 |
ENSG00000042088 |
0.15916592120826079 |
[1786] |
[290,802] |
1 |
hSpCas9 |
negative selection |
1365885 |
89963122 |
89963145 |
14 |
+ |
26627737 |
HeLa |
viability after 8 days |
AGGAAGGCGATTATGGGAGGTGG |
TDP1 |
ENSG00000042088 |
0.1331381293090976 |
[455] |
[171,137,324] |
1 |
hSpCas9 |
negative selection |
1448195 |
89967371 |
89967394 |
14 |
+ |
26627737 |
HeLa |
viability after 8 days |
ACTACTGCTTTGACGTGGACTGG |
TDP1 |
ENSG00000042088 |
-0.01790817307576842 |
[293] |
[94,192,86] |
0 |
hSpCas9 |
negative selection |
1448196 |
89971229 |
89971252 |
14 |
- |
26627737 |
HeLa |
viability after 8 days |
CGTAAGGCTTGGCCTGGGCATGG |
TDP1 |
ENSG00000042088 |
1.0877135810296945 |
[349] |
[255,299,394] |
8 |
hSpCas9 |
negative selection |
1448197 |
89980573 |
89980596 |
14 |
- |
26627737 |
HeLa |
viability after 8 days |
TGGAGGTGTGTATGACAACCCGG |
TDP1 |
ENSG00000042088 |
-0.6914827925834119 |
[838] |
[327,166,206] |
-6 |
hSpCas9 |
negative selection |
1448198 |
89984627 |
89984650 |
14 |
- |
26627737 |
HeLa |
viability after 8 days |
CTATCCACTCCTTGAGAGAAGGG |
TDP1 |
ENSG00000042088 |
-0.06371909091797301 |
[794] |
[609,270,183] |
0 |
hSpCas9 |
negative selection |
1448199 |
89988916 |
89988939 |
14 |
- |
26627737 |
HeLa |
viability after 8 days |
CGTTAGGCATGGATGAGGCATGG |
TDP1 |
ENSG00000042088 |
0.30163181338058376 |
[686] |
[358,356,385] |
3 |
hSpCas9 |
negative selection |
1448200 |
89963122 |
89963145 |
14 |
+ |
26627737 |
HeLa |
viability after 12 days |
AGGAAGGCGATTATGGGAGGTGG |
TDP1 |
ENSG00000042088 |
-0.3858188126394605 |
[455] |
[276,54,113] |
-3 |
hSpCas9 |
negative selection |
1530510 |
89967371 |
89967394 |
14 |
+ |
26627737 |
HeLa |
viability after 12 days |
ACTACTGCTTTGACGTGGACTGG |
TDP1 |
ENSG00000042088 |
0.011039552037114486 |
[293] |
[138,176,45] |
0 |
hSpCas9 |
negative selection |
1530511 |
89971229 |
89971252 |
14 |
- |
26627737 |
HeLa |
viability after 12 days |
CGTAAGGCTTGGCCTGGGCATGG |
TDP1 |
ENSG00000042088 |
1.6506037124068014 |
[349] |
[500,413,452] |
9 |
hSpCas9 |
negative selection |
1530512 |
89980573 |
89980596 |
14 |
- |
26627737 |
HeLa |
viability after 12 days |
TGGAGGTGTGTATGACAACCCGG |
TDP1 |
ENSG00000042088 |
-0.051052936523521275 |
[838] |
[419,329,256] |
0 |
hSpCas9 |
negative selection |
1530513 |
89984627 |
89984650 |
14 |
- |
26627737 |
HeLa |
viability after 12 days |
CTATCCACTCCTTGAGAGAAGGG |
TDP1 |
ENSG00000042088 |
-0.1798638712456464 |
[794] |
[328,263,280] |
-1 |
hSpCas9 |
negative selection |
1530514 |
89988916 |
89988939 |
14 |
- |
26627737 |
HeLa |
viability after 12 days |
CGTTAGGCATGGATGAGGCATGG |
TDP1 |
ENSG00000042088 |
0.4804228339378318 |
[686] |
[524,339,332] |
4 |
hSpCas9 |
negative selection |
1530515 |
89963122 |
89963145 |
14 |
+ |
26627737 |
HeLa |
viability after 15 days |
AGGAAGGCGATTATGGGAGGTGG |
TDP1 |
ENSG00000042088 |
-0.24934322623220073 |
[455] |
[212,83,171] |
-2 |
hSpCas9 |
negative selection |
1612825 |
89967371 |
89967394 |
14 |
+ |
26627737 |
HeLa |
viability after 15 days |
ACTACTGCTTTGACGTGGACTGG |
TDP1 |
ENSG00000042088 |
-0.987209090975655 |
[293] |
[50,84,43] |
-7 |
hSpCas9 |
negative selection |
1612826 |
89971229 |
89971252 |
14 |
- |
26627737 |
HeLa |
viability after 15 days |
CGTAAGGCTTGGCCTGGGCATGG |
TDP1 |
ENSG00000042088 |
1.4383641267301182 |
[349] |
[236,384,550] |
8 |
hSpCas9 |
negative selection |
1612827 |
89980573 |
89980596 |
14 |
- |
26627737 |
HeLa |
viability after 15 days |
TGGAGGTGTGTATGACAACCCGG |
TDP1 |
ENSG00000042088 |
-0.6218077491884502 |
[838] |
[290,139,234] |
-5 |
hSpCas9 |
negative selection |
1612828 |
89984627 |
89984650 |
14 |
- |
26627737 |
HeLa |
viability after 15 days |
CTATCCACTCCTTGAGAGAAGGG |
TDP1 |
ENSG00000042088 |
0.16245925805567096 |
[794] |
[318,444,319] |
1 |
hSpCas9 |
negative selection |
1612829 |
89988916 |
89988939 |
14 |
- |
26627737 |
HeLa |
viability after 15 days |
CGTTAGGCATGGATGAGGCATGG |
TDP1 |
ENSG00000042088 |
0.5649649188637198 |
[686] |
[303,411,535] |
4 |
hSpCas9 |
negative selection |
1612830 |
89963122 |
89963145 |
14 |
+ |
26627737 |
HeLa |
viability after 18 days |
AGGAAGGCGATTATGGGAGGTGG |
TDP1 |
ENSG00000042088 |
-0.24535684252671608 |
[455] |
[140,72,171] |
-2 |
hSpCas9 |
negative selection |
1695140 |
89967371 |
89967394 |
14 |
+ |
26627737 |
HeLa |
viability after 18 days |
ACTACTGCTTTGACGTGGACTGG |
TDP1 |
ENSG00000042088 |
-0.8821103512423978 |
[293] |
[36,77,43] |
-6 |
hSpCas9 |
negative selection |
1695141 |
89971229 |
89971252 |
14 |
- |
26627737 |
HeLa |
viability after 18 days |
CGTAAGGCTTGGCCTGGGCATGG |
TDP1 |
ENSG00000042088 |
1.4694282568799957 |
[349] |
[163,332,550] |
8 |
hSpCas9 |
negative selection |
1695142 |
89980573 |
89980596 |
14 |
- |
26627737 |
HeLa |
viability after 18 days |
TGGAGGTGTGTATGACAACCCGG |
TDP1 |
ENSG00000042088 |
-0.6379043925741139 |
[838] |
[191,113,234] |
-5 |
hSpCas9 |
negative selection |
1695143 |
89984627 |
89984650 |
14 |
- |
26627737 |
HeLa |
viability after 18 days |
CTATCCACTCCTTGAGAGAAGGG |
TDP1 |
ENSG00000042088 |
0.1980226538473724 |
[794] |
[223,377,319] |
1 |
hSpCas9 |
negative selection |
1695144 |
89988916 |
89988939 |
14 |
- |
26627737 |
HeLa |
viability after 18 days |
CGTTAGGCATGGATGAGGCATGG |
TDP1 |
ENSG00000042088 |
0.5744499848101472 |
[686] |
[202,348,535] |
4 |
hSpCas9 |
negative selection |
1695145 |
89963122 |
89963145 |
14 |
+ |
26627737 |
HCT116 |
viability after 6 days |
AGGAAGGCGATTATGGGAGGTGG |
TDP1 |
ENSG00000042088 |
1.1797113759526197 |
[597] |
[172,234] |
6 |
hSpCas9 |
negative selection |
1777455 |
89967371 |
89967394 |
14 |
+ |
26627737 |
HCT116 |
viability after 6 days |
ACTACTGCTTTGACGTGGACTGG |
TDP1 |
ENSG00000042088 |
-0.08142572750796823 |
[467] |
[55,76] |
0 |
hSpCas9 |
negative selection |
1777456 |
89971229 |
89971252 |
14 |
- |
26627737 |
HCT116 |
viability after 6 days |
CGTAAGGCTTGGCCTGGGCATGG |
TDP1 |
ENSG00000042088 |
0.7306877800450747 |
[1055] |
[444,181] |
4 |
hSpCas9 |
negative selection |
1777457 |
89980573 |
89980596 |
14 |
- |
26627737 |
HCT116 |
viability after 6 days |
TGGAGGTGTGTATGACAACCCGG |
TDP1 |
ENSG00000042088 |
0.3709101234080887 |
[1480] |
[215,347] |
2 |
hSpCas9 |
negative selection |
1777458 |
89984627 |
89984650 |
14 |
- |
26627737 |
HCT116 |
viability after 6 days |
CTATCCACTCCTTGAGAGAAGGG |
TDP1 |
ENSG00000042088 |
-0.5605822081743026 |
[698] |
[98,60] |
-3 |
hSpCas9 |
negative selection |
1777459 |
89988916 |
89988939 |
14 |
- |
26627737 |
HCT116 |
viability after 6 days |
CGTTAGGCATGGATGAGGCATGG |
TDP1 |
ENSG00000042088 |
0.7504777128780313 |
[1172] |
[384,268] |
4 |
hSpCas9 |
negative selection |
1777460 |
89963122 |
89963145 |
14 |
+ |
26627737 |
HCT116 |
viability after 8 days |
AGGAAGGCGATTATGGGAGGTGG |
TDP1 |
ENSG00000042088 |
-0.9813840506906322 |
[557] |
[151,230,84] |
-8 |
hSpCas9 |
negative selection |
1859770 |
89967371 |
89967394 |
14 |
+ |
26627737 |
HCT116 |
viability after 8 days |
ACTACTGCTTTGACGTGGACTGG |
TDP1 |
ENSG00000042088 |
0.007120275458173064 |
[172] |
[106,117,62] |
0 |
hSpCas9 |
negative selection |
1859771 |
89971229 |
89971252 |
14 |
- |
26627737 |
HCT116 |
viability after 8 days |
CGTAAGGCTTGGCCTGGGCATGG |
TDP1 |
ENSG00000042088 |
0.5973303038709986 |
[441] |
[470,328,307] |
6 |
hSpCas9 |
negative selection |
1859772 |
89980573 |
89980596 |
14 |
- |
26627737 |
HCT116 |
viability after 8 days |
TGGAGGTGTGTATGACAACCCGG |
TDP1 |
ENSG00000042088 |
0.013587412296691803 |
[516] |
[289,303,268] |
0 |
hSpCas9 |
negative selection |
1859773 |
89984627 |
89984650 |
14 |
- |
26627737 |
HCT116 |
viability after 8 days |
CTATCCACTCCTTGAGAGAAGGG |
TDP1 |
ENSG00000042088 |
0.7894516816702556 |
[369] |
[418,339,299] |
7 |
hSpCas9 |
negative selection |
1859774 |
89988916 |
89988939 |
14 |
- |
26627737 |
HCT116 |
viability after 8 days |
CGTTAGGCATGGATGAGGCATGG |
TDP1 |
ENSG00000042088 |
0.35645034702184675 |
[637] |
[391,488,467] |
4 |
hSpCas9 |
negative selection |
1859775 |
89963122 |
89963145 |
14 |
+ |
26627737 |
HCT116 |
viability after 9 days |
AGGAAGGCGATTATGGGAGGTGG |
TDP1 |
ENSG00000042088 |
0.9747393810668434 |
[597] |
[410,236] |
6 |
hSpCas9 |
negative selection |
1942085 |
89967371 |
89967394 |
14 |
+ |
26627737 |
HCT116 |
viability after 9 days |
ACTACTGCTTTGACGTGGACTGG |
TDP1 |
ENSG00000042088 |
-1.9564668555385514 |
[467] |
[15,44] |
-8 |
hSpCas9 |
negative selection |
1942086 |
89971229 |
89971252 |
14 |
- |
26627737 |
HCT116 |
viability after 9 days |
CGTAAGGCTTGGCCTGGGCATGG |
TDP1 |
ENSG00000042088 |
0.6869437671982851 |
[1055] |
[506,411] |
5 |
hSpCas9 |
negative selection |
1942087 |
89980573 |
89980596 |
14 |
- |
26627737 |
HCT116 |
viability after 9 days |
TGGAGGTGTGTATGACAACCCGG |
TDP1 |
ENSG00000042088 |
-0.34459073031210774 |
[1480] |
[230,374] |
-2 |
hSpCas9 |
negative selection |
1942088 |
89984627 |
89984650 |
14 |
- |
26627737 |
HCT116 |
viability after 9 days |
CTATCCACTCCTTGAGAGAAGGG |
TDP1 |
ENSG00000042088 |
1.399887054714872 |
[698] |
[415,552] |
8 |
hSpCas9 |
negative selection |
1942089 |
89988916 |
89988939 |
14 |
- |
26627737 |
HCT116 |
viability after 9 days |
CGTTAGGCATGGATGAGGCATGG |
TDP1 |
ENSG00000042088 |
1.2202743666817502 |
[1172] |
[836,644] |
7 |
hSpCas9 |
negative selection |
1942090 |
89963122 |
89963145 |
14 |
+ |
26627737 |
HCT116 |
viability after 12 days |
AGGAAGGCGATTATGGGAGGTGG |
TDP1 |
ENSG00000042088 |
-0.8888911627629098 |
[557] |
[153,262,60] |
-7 |
hSpCas9 |
negative selection |
2024400 |
89967371 |
89967394 |
14 |
+ |
26627737 |
HCT116 |
viability after 12 days |
ACTACTGCTTTGACGTGGACTGG |
TDP1 |
ENSG00000042088 |
0.15593187452603452 |
[172] |
[135,66,96] |
1 |
hSpCas9 |
negative selection |
2024401 |
89971229 |
89971252 |
14 |
- |
26627737 |
HCT116 |
viability after 12 days |
CGTAAGGCTTGGCCTGGGCATGG |
TDP1 |
ENSG00000042088 |
0.9265495257489741 |
[441] |
[524,268,518] |
7 |
hSpCas9 |
negative selection |
2024402 |
89980573 |
89980596 |
14 |
- |
26627737 |
HCT116 |
viability after 12 days |
TGGAGGTGTGTATGACAACCCGG |
TDP1 |
ENSG00000042088 |
-0.024517940925978143 |
[516] |
[262,319,219] |
0 |
hSpCas9 |
negative selection |
2024403 |
89984627 |
89984650 |
14 |
- |
26627737 |
HCT116 |
viability after 12 days |
CTATCCACTCCTTGAGAGAAGGG |
TDP1 |
ENSG00000042088 |
0.7456448782046682 |
[369] |
[295,295,387] |
6 |
hSpCas9 |
negative selection |
2024404 |
89988916 |
89988939 |
14 |
- |
26627737 |
HCT116 |
viability after 12 days |
CGTTAGGCATGGATGAGGCATGG |
TDP1 |
ENSG00000042088 |
0.5228275386402466 |
[637] |
[478,422,541] |
5 |
hSpCas9 |
negative selection |
2024405 |
89963122 |
89963145 |
14 |
+ |
26627737 |
HCT116 |
viability after 15 days |
AGGAAGGCGATTATGGGAGGTGG |
TDP1 |
ENSG00000042088 |
-1.4192118574573342 |
[557] |
[132,184,43] |
-8 |
hSpCas9 |
negative selection |
2106715 |
89967371 |
89967394 |
14 |
+ |
26627737 |
HCT116 |
viability after 15 days |
ACTACTGCTTTGACGTGGACTGG |
TDP1 |
ENSG00000042088 |
0.03325503595810719 |
[172] |
[135,138,34] |
0 |
hSpCas9 |
negative selection |
2106716 |
89971229 |
89971252 |
14 |
- |
26627737 |
HCT116 |
viability after 15 days |
CGTAAGGCTTGGCCTGGGCATGG |
TDP1 |
ENSG00000042088 |
0.5982654352849569 |
[441] |
[593,168,414] |
5 |
hSpCas9 |
negative selection |
2106717 |
89980573 |
89980596 |
14 |
- |
26627737 |
HCT116 |
viability after 15 days |
TGGAGGTGTGTATGACAACCCGG |
TDP1 |
ENSG00000042088 |
-0.06705335587754202 |
[516] |
[285,314,249] |
0 |
hSpCas9 |
negative selection |
2106718 |
89984627 |
89984650 |
14 |
- |
26627737 |
HCT116 |
viability after 15 days |
CTATCCACTCCTTGAGAGAAGGG |
TDP1 |
ENSG00000042088 |
0.4541953535590144 |
[369] |
[290,263,317] |
4 |
hSpCas9 |
negative selection |
2106719 |
89988916 |
89988939 |
14 |
- |
26627737 |
HCT116 |
viability after 15 days |
CGTTAGGCATGGATGAGGCATGG |
TDP1 |
ENSG00000042088 |
0.378780804467592 |
[637] |
[613,606,227] |
3 |
hSpCas9 |
negative selection |
2106720 |
89963122 |
89963145 |
14 |
+ |
26627737 |
HCT116 |
viability after 18 days |
AGGAAGGCGATTATGGGAGGTGG |
TDP1 |
ENSG00000042088 |
-0.7051530504880205 |
[557] |
[117,196,179] |
-6 |
hSpCas9 |
negative selection |
2189030 |
89967371 |
89967394 |
14 |
+ |
26627737 |
HCT116 |
viability after 18 days |
ACTACTGCTTTGACGTGGACTGG |
TDP1 |
ENSG00000042088 |
-0.1846180746562962 |
[172] |
[134,54,29] |
-2 |
hSpCas9 |
negative selection |
2189031 |
89971229 |
89971252 |
14 |
- |
26627737 |
HCT116 |
viability after 18 days |
CGTAAGGCTTGGCCTGGGCATGG |
TDP1 |
ENSG00000042088 |
1.0026352054660643 |
[441] |
[678,174,447] |
7 |
hSpCas9 |
negative selection |
2189032 |
89980573 |
89980596 |
14 |
- |
26627737 |
HCT116 |
viability after 18 days |
TGGAGGTGTGTATGACAACCCGG |
TDP1 |
ENSG00000042088 |
0.7011657658932695 |
[516] |
[645,265,311] |
6 |
hSpCas9 |
negative selection |
2189033 |
89984627 |
89984650 |
14 |
- |
26627737 |
HCT116 |
viability after 18 days |
CTATCCACTCCTTGAGAGAAGGG |
TDP1 |
ENSG00000042088 |
0.33544789272817466 |
[369] |
[209,155,319] |
3 |
hSpCas9 |
negative selection |
2189034 |
89988916 |
89988939 |
14 |
- |
26627737 |
HCT116 |
viability after 18 days |
CGTTAGGCATGGATGAGGCATGG |
TDP1 |
ENSG00000042088 |
0.40058119916205004 |
[637] |
[429,495,283] |
3 |
hSpCas9 |
negative selection |
2189035 |
89963102 |
89963125 |
14 |
+ |
24336569 |
HL60 |
viability |
TTCCAGGAGTATAATGTCTCAGG |
TDP1 |
ENSG00000042088 |
-0.33932446012475326 |
[500] |
[837] |
-3 |
hSpCas9 |
negative selection |
2299621 |
89963115 |
89963138 |
14 |
+ |
24336569 |
HL60 |
viability |
ATGTCTCAGGAAGGCGATTATGG |
TDP1 |
ENSG00000042088 |
0.8581037689342199 |
[517] |
[1986] |
7 |
hSpCas9 |
negative selection |
2299622 |
89963122 |
89963145 |
14 |
+ |
24336569 |
HL60 |
viability |
AGGAAGGCGATTATGGGAGGTGG |
TDP1 |
ENSG00000042088 |
-0.400667558179723 |
[528] |
[847] |
-4 |
hSpCas9 |
negative selection |
2299623 |
89963146 |
89963169 |
14 |
- |
24336569 |
HL60 |
viability |
ACTTTCATCACTACTAGATATGG |
TDP1 |
ENSG00000042088 |
-0.0015405563319470517 |
[236] |
[500] |
0 |
hSpCas9 |
negative selection |
2299624 |
89963187 |
89963210 |
14 |
- |
24336569 |
HL60 |
viability |
GAAGAGGTAGATGGCTTGTCTGG |
TDP1 |
ENSG00000042088 |
0.2491375376634486 |
[1193] |
[3002] |
2 |
hSpCas9 |
negative selection |
2299625 |
89963196 |
89963219 |
14 |
- |
24336569 |
HL60 |
viability |
CAGAGAAGAGAAGAGGTAGATGG |
TDP1 |
ENSG00000042088 |
0.5780203433585711 |
[414] |
[1310] |
5 |
hSpCas9 |
negative selection |
2299626 |
89963203 |
89963226 |
14 |
- |
24336569 |
HL60 |
viability |
CCTGGCACAGAGAAGAGAAGAGG |
TDP1 |
ENSG00000042088 |
-0.8117922428729579 |
[505] |
[609] |
-6 |
hSpCas9 |
negative selection |
2299627 |
89963208 |
89963231 |
14 |
+ |
24336569 |
HL60 |
viability |
TCTCTTCTCTGTGCCAGGCAAGG |
TDP1 |
ENSG00000042088 |
-0.18334371464810995 |
[329] |
[614] |
-1 |
hSpCas9 |
negative selection |
2299628 |
89963221 |
89963244 |
14 |
- |
24336569 |
HL60 |
viability |
CTCATTTGCTGCTCCTTGCCTGG |
TDP1 |
ENSG00000042088 |
-0.779573758978079 |
[695] |
[857] |
-6 |
hSpCas9 |
negative selection |
2299629 |
89963227 |
89963250 |
14 |
+ |
24336569 |
HL60 |
viability |
AAGGAGCAGCAAATGAGCCCAGG |
TDP1 |
ENSG00000042088 |
-0.3093788063763868 |
[697] |
[1191] |
-3 |
hSpCas9 |
negative selection |
2299630 |
89963102 |
89963125 |
14 |
+ |
24336569 |
KBM7 |
viability |
TTCCAGGAGTATAATGTCTCAGG |
TDP1 |
ENSG00000042088 |
0.07376720487630206 |
[169] |
[487] |
0 |
hSpCas9 |
negative selection |
2366798 |
89963115 |
89963138 |
14 |
+ |
24336569 |
KBM7 |
viability |
ATGTCTCAGGAAGGCGATTATGG |
TDP1 |
ENSG00000042088 |
0.36037126526573926 |
[691] |
[2422] |
3 |
hSpCas9 |
negative selection |
2366799 |
89963122 |
89963145 |
14 |
+ |
24336569 |
KBM7 |
viability |
AGGAAGGCGATTATGGGAGGTGG |
TDP1 |
ENSG00000042088 |
0.7267109974548316 |
[219] |
[992] |
6 |
hSpCas9 |
negative selection |
2366800 |
89963146 |
89963169 |
14 |
- |
24336569 |
KBM7 |
viability |
ACTTTCATCACTACTAGATATGG |
TDP1 |
ENSG00000042088 |
1.714227071926526 |
[98] |
[885] |
9 |
hSpCas9 |
negative selection |
2366801 |
89963187 |
89963210 |
14 |
- |
24336569 |
KBM7 |
viability |
GAAGAGGTAGATGGCTTGTCTGG |
TDP1 |
ENSG00000042088 |
0.14690238225226726 |
[855] |
[2584] |
1 |
hSpCas9 |
negative selection |
2366802 |
89963196 |
89963219 |
14 |
- |
24336569 |
KBM7 |
viability |
CAGAGAAGAGAAGAGGTAGATGG |
TDP1 |
ENSG00000042088 |
-0.6395210353640763 |
[292] |
[512] |
-5 |
hSpCas9 |
negative selection |
2366803 |
89963203 |
89963226 |
14 |
- |
24336569 |
KBM7 |
viability |
CCTGGCACAGAGAAGAGAAGAGG |
TDP1 |
ENSG00000042088 |
0.5423319858275336 |
[286] |
[1139] |
5 |
hSpCas9 |
negative selection |
2366804 |
89963208 |
89963231 |
14 |
+ |
24336569 |
KBM7 |
viability |
TCTCTTCTCTGTGCCAGGCAAGG |
TDP1 |
ENSG00000042088 |
0.3948795264646376 |
[260] |
[935] |
3 |
hSpCas9 |
negative selection |
2366805 |
89963221 |
89963244 |
14 |
- |
24336569 |
KBM7 |
viability |
CTCATTTGCTGCTCCTTGCCTGG |
TDP1 |
ENSG00000042088 |
1.0849564555752875 |
[438] |
[2539] |
8 |
hSpCas9 |
negative selection |
2366806 |
89963227 |
89963250 |
14 |
+ |
24336569 |
KBM7 |
viability |
AAGGAGCAGCAAATGAGCCCAGG |
TDP1 |
ENSG00000042088 |
-0.15052577030054937 |
[467] |
[1149] |
-1 |
hSpCas9 |
negative selection |
2366807 |
89955782 |
89955805 |
14 |
- |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
AGGACGGGGCTGGGGAAACCTGG |
TDP1 |
ENSG00000042088 |
2.7172754803164434 |
[353,10] |
[483,18] |
8 |
dCas9-VP64 |
positive selection |
2388249 |
89955764 |
89955787 |
14 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
GCCAAGAGCTAGGAGAGACCAGG |
TDP1 |
ENSG00000042088 |
3.006963651464921 |
[4,3] |
[2,12] |
8 |
dCas9-VP64 |
positive selection |
2388250 |
89955807 |
89955830 |
14 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
GTAAACACCCGGCGGGCTTTAGG |
TDP1 |
ENSG00000042088 |
3.181224307554332 |
[48,255] |
[4,636] |
8 |
dCas9-VP64 |
positive selection |
2388251 |
90031565 |
90031588 |
14 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
GAGAACTGCTTGAACCCGGGTGG |
TDP1 |
ENSG00000042088 |
-0.49490286023555685 |
[54,83] |
[3,16] |
-2 |
dCas9-VP64 |
positive selection |
2421107 |
89954925 |
89954948 |
14 |
- |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
CGAGTTAAGGGACAGTCAGGGGG |
TDP1 |
ENSG00000042088 |
-0.9178686694787404 |
[470,108] |
[44,20] |
-5 |
dCas9-VP64 |
positive selection |
2423160 |
90029697 |
90029720 |
14 |
- |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
CGAGACCAGCCTGATCAACATAG |
TDP1 |
ENSG00000042088 |
-0.08492757567810244 |
[180,53] |
[21,25] |
0 |
dCas9-VP64 |
positive selection |
2451937 |
90016285 |
90016308 |
14 |
- |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
ACTTTGGGAGGCCAAGGCAGCGG |
TDP1 |
ENSG00000042088 |
2.0119762381202047 |
[93,200] |
[9,263] |
7 |
dCas9-VP64 |
positive selection |
2462449 |
89955782 |
89955805 |
14 |
- |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
AGGACGGGGCTGGGGAAACCTGG |
TDP1 |
ENSG00000042088 |
-0.44627811476039503 |
[72,41] |
[17,8] |
-5 |
dCas9-VP64 |
positive selection |
2483504 |
89955764 |
89955787 |
14 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
GCCAAGAGCTAGGAGAGACCAGG |
TDP1 |
ENSG00000042088 |
0.9260214558567039 |
[159,87] |
[143,14] |
6 |
dCas9-VP64 |
positive selection |
2483505 |
89955807 |
89955830 |
14 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
GTAAACACCCGGCGGGCTTTAGG |
TDP1 |
ENSG00000042088 |
-1.298332737362149 |
[19,158] |
[11,9] |
-9 |
dCas9-VP64 |
positive selection |
2483506 |
90031565 |
90031588 |
14 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
GAGAACTGCTTGAACCCGGGTGG |
TDP1 |
ENSG00000042088 |
0.07163893759037979 |
[96,162] |
[32,54] |
0 |
dCas9-VP64 |
positive selection |
2516362 |
89954925 |
89954948 |
14 |
- |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
CGAGTTAAGGGACAGTCAGGGGG |
TDP1 |
ENSG00000042088 |
-0.5935202766946864 |
[118,276] |
[36,46] |
-6 |
dCas9-VP64 |
positive selection |
2518415 |
90029697 |
90029720 |
14 |
- |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
CGAGACCAGCCTGATCAACATAG |
TDP1 |
ENSG00000042088 |
-0.6769120761823355 |
[84,46] |
[15,9] |
-6 |
dCas9-VP64 |
positive selection |
2547192 |
90016285 |
90016308 |
14 |
- |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
ACTTTGGGAGGCCAAGGCAGCGG |
TDP1 |
ENSG00000042088 |
-0.4547686614086857 |
[146,265] |
[55,41] |
-5 |
dCas9-VP64 |
positive selection |
2557704 |
89980612 |
89980635 |
14 |
+ |
27453484 |
HT29 |
resistance to T3SS1-dependent cytotoxicity |
ACTGGCACCAGAAAACTCAAGGG |
TDP1 |
ENSG00000042088 |
0.12572809017892955 |
[3,4] |
[4,3] |
2 |
hSpCas9 |
positive selection |
3026089 |
89980570 |
89980593 |
14 |
- |
27453484 |
HT29 |
resistance to T3SS1-dependent cytotoxicity |
AGGTGTGTATGACAACCCGGAGG |
TDP1 |
ENSG00000042088 |
-0.46539979754400074 |
[1,1] |
[0,0] |
-6 |
hSpCas9 |
positive selection |
3026090 |
89963203 |
89963226 |
14 |
- |
27453484 |
HT29 |
resistance to T3SS1-dependent cytotoxicity |
CCTGGCACAGAGAAGAGAAGAGG |
TDP1 |
ENSG00000042088 |
-0.18641685388401005 |
[2,3] |
[3,0] |
-3 |
hSpCas9 |
positive selection |
3026091 |
89963244 |
89963267 |
14 |
+ |
27453484 |
HT29 |
resistance to T3SS1-dependent cytotoxicity |
GCCCAGGTACACCTGTTCCGAGG |
TDP1 |
ENSG00000042088 |
0.030397843161495824 |
[3,3] |
[2,3] |
0 |
hSpCas9 |
positive selection |
3026092 |
89980612 |
89980635 |
14 |
+ |
27453484 |
HT29 |
resistance to T3SS2-dependent cytotoxicity |
ACTGGCACCAGAAAACTCAAGGG |
TDP1 |
ENSG00000042088 |
-0.031786120353306344 |
[3,3] |
[4,1] |
0 |
hSpCas9 |
positive selection |
3093947 |
89980570 |
89980593 |
14 |
- |
27453484 |
HT29 |
resistance to T3SS2-dependent cytotoxicity |
AGGTGTGTATGACAACCCGGAGG |
TDP1 |
ENSG00000042088 |
-0.537014430491294 |
[1,1] |
[0,0] |
-7 |
hSpCas9 |
positive selection |
3093948 |
89963203 |
89963226 |
14 |
- |
27453484 |
HT29 |
resistance to T3SS2-dependent cytotoxicity |
CCTGGCACAGAGAAGAGAAGAGG |
TDP1 |
ENSG00000042088 |
-0.34628180055487645 |
[2,2] |
[2,0] |
-5 |
hSpCas9 |
positive selection |
3093949 |
89963244 |
89963267 |
14 |
+ |
27453484 |
HT29 |
resistance to T3SS2-dependent cytotoxicity |
GCCCAGGTACACCTGTTCCGAGG |
TDP1 |
ENSG00000042088 |
0.9193732796864125 |
[3,3] |
[4,5] |
9 |
hSpCas9 |
positive selection |
3093950 |
89967401 |
89967424 |
|
+ |
24336571 |
A375 |
resistance to PLX after 7 days |
AACAGTATCCACCAGAGTTCAGG |
TDP1 |
ENSG00000042088 |
0.04241460182988621 |
[16,19] |
[19,17] |
1 |
hSpCas9 |
positive selection |
3149600 |
89966169 |
89966192 |
|
+ |
24336571 |
A375 |
resistance to PLX after 7 days |
GACGCTTGTTTCTTCAGCTCAGG |
TDP1 |
ENSG00000042088 |
0.05099968973103741 |
[3,3] |
[3,3] |
1 |
hSpCas9 |
positive selection |
3149601 |
89967401 |
89967424 |
|
+ |
24336571 |
A375 |
resistance to PLX after 14 days |
AACAGTATCCACCAGAGTTCAGG |
TDP1 |
ENSG00000042088 |
1.8671224321258124 |
[16,16] |
[24,34] |
9 |
hSpCas9 |
positive selection |
3207393 |
89966169 |
89966192 |
|
+ |
24336571 |
A375 |
resistance to PLX after 14 days |
GACGCTTGTTTCTTCAGCTCAGG |
TDP1 |
ENSG00000042088 |
0.05281327713923645 |
[4,3] |
[1,1] |
0 |
hSpCas9 |
positive selection |
3207394 |
89967401 |
89967424 |
|
+ |
24336571 |
A375 |
viability after 7 days |
AACAGTATCCACCAGAGTTCAGG |
TDP1 |
ENSG00000042088 |
0.441750088149259 |
[13] |
[16,19] |
6 |
hSpCas9 |
negative selection |
3265186 |
89966169 |
89966192 |
|
+ |
24336571 |
A375 |
viability after 7 days |
GACGCTTGTTTCTTCAGCTCAGG |
TDP1 |
ENSG00000042088 |
0.5244141920787657 |
[2] |
[3,3] |
7 |
hSpCas9 |
negative selection |
3265187 |
89967401 |
89967424 |
|
+ |
24336571 |
A375 |
viability after 14 days |
AACAGTATCCACCAGAGTTCAGG |
TDP1 |
ENSG00000042088 |
0.33896249987385674 |
[13] |
[16,16] |
4 |
hSpCas9 |
negative selection |
3322979 |
89966169 |
89966192 |
|
+ |
24336571 |
A375 |
viability after 14 days |
GACGCTTGTTTCTTCAGCTCAGG |
TDP1 |
ENSG00000042088 |
0.779145286428514 |
[2] |
[4,3] |
8 |
hSpCas9 |
negative selection |
3322980 |
89967401 |
89967424 |
14 |
+ |
27383988 |
293T |
resistance to West Nile virus (flavivirus) |
AACAGTATCCACCAGAGTTCAGG |
TDP1 |
ENSG00000042088 |
-0.2425196756373702 |
[180,180] |
[0,0] |
-1 |
hSpCas9 |
positive selection |
3396644 |
89966169 |
89966192 |
14 |
+ |
27383988 |
293T |
resistance to West Nile virus (flavivirus) |
GACGCTTGTTTCTTCAGCTCAGG |
TDP1 |
ENSG00000042088 |
0.8143827155971068 |
[86,86] |
[0,0] |
4 |
hSpCas9 |
positive selection |
3396645 |
89966158 |
89966181 |
14 |
- |
27383988 |
293T |
resistance to West Nile virus (flavivirus) |
GAAACAAGCGTCCCAAATAAAGG |
TDP1 |
ENSG00000042088 |
1.3031299010589596 |
[61,61] |
[0,0] |
5 |
hSpCas9 |
positive selection |
3396646 |
89980611 |
89980634 |
14 |
+ |
26780180 |
HT29 |
viability (Avana library 4 designs) |
ACTGGCACCAGAAAACTCAAGGG |
TDP1 |
ENSG00000042088 |
0.440742772164886 |
[] |
[] |
1 |
hSpCas9 |
negative selection |
3464813 |
89980570 |
89980593 |
14 |
- |
26780180 |
HT29 |
viability (Avana library 4 designs) |
AGGTGTGTATGACAACCCGGAGG |
TDP1 |
ENSG00000042088 |
0.241713801099202 |
[] |
[] |
0 |
hSpCas9 |
negative selection |
3464814 |
89963203 |
89963226 |
14 |
- |
26780180 |
HT29 |
viability (Avana library 4 designs) |
CCTGGCACAGAGAAGAGAAGAGG |
TDP1 |
ENSG00000042088 |
1.95562597398923 |
[] |
[] |
7 |
hSpCas9 |
negative selection |
3464815 |
89963243 |
89963266 |
14 |
+ |
26780180 |
HT29 |
viability (Avana library 4 designs) |
GCCCAGGTACACCTGTTCCGAGG |
TDP1 |
ENSG00000042088 |
0.657114856977592 |
[] |
[] |
2 |
hSpCas9 |
negative selection |
3464816 |
89963203 |
89963226 |
14 |
- |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
CCTGGCACAGAGAAGAGAAGAGG |
TDP1 |
ENSG00000042088 |
0.697886037614184 |
[] |
[] |
1 |
hSpCas9 |
negative selection |
3567701 |
89963243 |
89963266 |
14 |
+ |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
GCCCAGGTACACCTGTTCCGAGG |
TDP1 |
ENSG00000042088 |
6.04237897293384 |
[] |
[] |
9 |
hSpCas9 |
negative selection |
3567702 |
89980570 |
89980593 |
14 |
- |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
AGGTGTGTATGACAACCCGGAGG |
TDP1 |
ENSG00000042088 |
2.7350899383893 |
[] |
[] |
4 |
hSpCas9 |
negative selection |
3567703 |
89980611 |
89980634 |
14 |
+ |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
ACTGGCACCAGAAAACTCAAGGG |
TDP1 |
ENSG00000042088 |
-5.62393605921466 |
[] |
[] |
-6 |
hSpCas9 |
negative selection |
3567704 |
89963331 |
89963354 |
14 |
+ |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
CCTCCCAAAAGGCAGAAAAGCGG |
TDP1 |
ENSG00000042088 |
1.70388212107705 |
[] |
[] |
2 |
hSpCas9 |
negative selection |
3567705 |
89967366 |
89967389 |
14 |
+ |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
GTTTAACTACTGCTTTGACGTGG |
TDP1 |
ENSG00000042088 |
-2.09070775388095 |
[] |
[] |
-3 |
hSpCas9 |
negative selection |
3567706 |
89963203 |
89963226 |
14 |
- |
26780180 |
A375 |
viability (Avana lentiGuide) |
CCTGGCACAGAGAAGAGAAGAGG |
TDP1 |
ENSG00000042088 |
10.7072566169864 |
[] |
[] |
7 |
hSpCas9 |
negative selection |
3676360 |
89963243 |
89963266 |
14 |
+ |
26780180 |
A375 |
viability (Avana lentiGuide) |
GCCCAGGTACACCTGTTCCGAGG |
TDP1 |
ENSG00000042088 |
-3.28940318011327 |
[] |
[] |
-6 |
hSpCas9 |
negative selection |
3676361 |
89980570 |
89980593 |
14 |
- |
26780180 |
A375 |
viability (Avana lentiGuide) |
AGGTGTGTATGACAACCCGGAGG |
TDP1 |
ENSG00000042088 |
15.2818767069161 |
[] |
[] |
8 |
hSpCas9 |
negative selection |
3676362 |
89980611 |
89980634 |
14 |
+ |
26780180 |
A375 |
viability (Avana lentiGuide) |
ACTGGCACCAGAAAACTCAAGGG |
TDP1 |
ENSG00000042088 |
1.15692782190159 |
[] |
[] |
1 |
hSpCas9 |
negative selection |
3676363 |
89963331 |
89963354 |
14 |
+ |
26780180 |
A375 |
viability (Avana lentiGuide) |
CCTCCCAAAAGGCAGAAAAGCGG |
TDP1 |
ENSG00000042088 |
-1.3598607309107 |
[] |
[] |
-2 |
hSpCas9 |
negative selection |
3676364 |
89967366 |
89967389 |
14 |
+ |
26780180 |
A375 |
viability (Avana lentiGuide) |
GTTTAACTACTGCTTTGACGTGG |
TDP1 |
ENSG00000042088 |
0.170935469071998 |
[] |
[] |
0 |
hSpCas9 |
negative selection |
3676365 |
89963203 |
89963226 |
14 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
CCTGGCACAGAGAAGAGAAGAGG |
TDP1 |
ENSG00000042088 |
-0.236676861131587 |
[4] |
[3,2] |
-4 |
hSpCas9 |
positive selection |
3784967 |
89963243 |
89963266 |
14 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
GCCCAGGTACACCTGTTCCGAGG |
TDP1 |
ENSG00000042088 |
0.28209880059022957 |
[4] |
[5,5] |
7 |
hSpCas9 |
positive selection |
3784968 |
89980570 |
89980593 |
14 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
AGGTGTGTATGACAACCCGGAGG |
TDP1 |
ENSG00000042088 |
0.2118597928618703 |
[3] |
[4,4] |
6 |
hSpCas9 |
positive selection |
3784969 |
89980611 |
89980634 |
14 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
ACTGGCACCAGAAAACTCAAGGG |
TDP1 |
ENSG00000042088 |
-0.3951490540362645 |
[5] |
[4,2] |
-5 |
hSpCas9 |
positive selection |
3784970 |
89963331 |
89963354 |
14 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
CCTCCCAAAAGGCAGAAAAGCGG |
TDP1 |
ENSG00000042088 |
0.23372573693052623 |
[5] |
[6,6] |
6 |
hSpCas9 |
positive selection |
3784971 |
89967366 |
89967389 |
14 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
GTTTAACTACTGCTTTGACGTGG |
TDP1 |
ENSG00000042088 |
-0.35283539009689474 |
[5] |
[3,4] |
-5 |
hSpCas9 |
positive selection |
3784972 |
89963203 |
89963226 |
14 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
CCTGGCACAGAGAAGAGAAGAGG |
TDP1 |
ENSG00000042088 |
-0.1662956242432177 |
[4] |
[4,2] |
-2 |
hSpCas9 |
positive selection |
3893574 |
89963243 |
89963266 |
14 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
GCCCAGGTACACCTGTTCCGAGG |
TDP1 |
ENSG00000042088 |
-1.5421135583991223 |
[5] |
[0,0] |
-9 |
hSpCas9 |
positive selection |
3893575 |
89980570 |
89980593 |
14 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
AGGTGTGTATGACAACCCGGAGG |
TDP1 |
ENSG00000042088 |
-0.6721437919454243 |
[3] |
[2,0] |
-7 |
hSpCas9 |
positive selection |
3893576 |
89980611 |
89980634 |
14 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
ACTGGCACCAGAAAACTCAAGGG |
TDP1 |
ENSG00000042088 |
0.2963814640998765 |
[5] |
[5,5] |
8 |
hSpCas9 |
positive selection |
3893577 |
89963331 |
89963354 |
14 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
CCTCCCAAAAGGCAGAAAAGCGG |
TDP1 |
ENSG00000042088 |
0.045508131773187493 |
[5] |
[4,5] |
1 |
hSpCas9 |
positive selection |
3893578 |
89967366 |
89967389 |
14 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
GTTTAACTACTGCTTTGACGTGG |
TDP1 |
ENSG00000042088 |
-0.04060644397001814 |
[5] |
[5,3] |
0 |
hSpCas9 |
positive selection |
3893579 |
89967401 |
89967424 |
14 |
+ |
26780180 |
A375 |
viability |
AACAGTATCCACCAGAGTTCAGG |
TDP1 |
ENSG00000042088 |
1.34028156375244 |
[] |
[] |
7 |
hSpCas9 |
negative selection |
4002920 |
89971179 |
89971202 |
14 |
+ |
26780180 |
A375 |
viability |
AAGCCAATCCTGCTTGTGCATGG |
TDP1 |
ENSG00000042088 |
1.12245279636258 |
[] |
[] |
5 |
hSpCas9 |
negative selection |
4002921 |
89971245 |
89971268 |
14 |
- |
26780180 |
A375 |
viability |
CAGAGAGAGATGTTCTCGTAAGG |
TDP1 |
ENSG00000042088 |
0.836045907364173 |
[] |
[] |
3 |
hSpCas9 |
negative selection |
4002922 |
89966158 |
89966181 |
14 |
- |
26780180 |
A375 |
viability |
GAAACAAGCGTCCCAAATAAAGG |
TDP1 |
ENSG00000042088 |
0.858299490161063 |
[] |
[] |
3 |
hSpCas9 |
negative selection |
4002923 |
89966169 |
89966192 |
14 |
+ |
26780180 |
A375 |
viability |
GACGCTTGTTTCTTCAGCTCAGG |
TDP1 |
ENSG00000042088 |
0.733316753830139 |
[] |
[] |
2 |
hSpCas9 |
negative selection |
4002924 |
89967366 |
89967389 |
14 |
+ |
26780180 |
A375 |
viability |
GTTTAACTACTGCTTTGACGTGG |
TDP1 |
ENSG00000042088 |
0.958314590248639 |
[] |
[] |
4 |
hSpCas9 |
negative selection |
4002925 |
89967401 |
89967424 |
14 |
+ |
26780180 |
HT29 |
viability (GeCKOv2 library) |
AACAGTATCCACCAGAGTTCAGG |
TDP1 |
ENSG00000042088 |
1.6099219069178 |
[] |
[] |
8 |
hSpCas9 |
negative selection |
4110886 |
89971179 |
89971202 |
14 |
+ |
26780180 |
HT29 |
viability (GeCKOv2 library) |
AAGCCAATCCTGCTTGTGCATGG |
TDP1 |
ENSG00000042088 |
1.03371931545727 |
[] |
[] |
5 |
hSpCas9 |
negative selection |
4110887 |
89971245 |
89971268 |
14 |
- |
26780180 |
HT29 |
viability (GeCKOv2 library) |
CAGAGAGAGATGTTCTCGTAAGG |
TDP1 |
ENSG00000042088 |
1.31382837904423 |
[] |
[] |
6 |
hSpCas9 |
negative selection |
4110888 |
89966158 |
89966181 |
14 |
- |
26780180 |
HT29 |
viability (GeCKOv2 library) |
GAAACAAGCGTCCCAAATAAAGG |
TDP1 |
ENSG00000042088 |
1.32407353243738 |
[] |
[] |
6 |
hSpCas9 |
negative selection |
4110889 |
89966169 |
89966192 |
14 |
+ |
26780180 |
HT29 |
viability (GeCKOv2 library) |
GACGCTTGTTTCTTCAGCTCAGG |
TDP1 |
ENSG00000042088 |
0.844433476129929 |
[] |
[] |
3 |
hSpCas9 |
negative selection |
4110890 |
89967366 |
89967389 |
14 |
+ |
26780180 |
HT29 |
viability (GeCKOv2 library) |
GTTTAACTACTGCTTTGACGTGG |
TDP1 |
ENSG00000042088 |
0.231786751684709 |
[] |
[] |
0 |
hSpCas9 |
negative selection |
4110891 |
89967401 |
89967424 |
14 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiCRISPRv1) |
AACAGTATCCACCAGAGTTCAGG |
TDP1 |
ENSG00000042088 |
0.38779502500229046 |
[4] |
[2,4] |
8 |
hSpCas9 |
positive selection |
4175945 |
89966169 |
89966192 |
14 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiCRISPRv1) |
GACGCTTGTTTCTTCAGCTCAGG |
TDP1 |
ENSG00000042088 |
-0.47422964395153433 |
[3] |
[1,0] |
-8 |
hSpCas9 |
positive selection |
4175946 |
89967401 |
89967424 |
14 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiGuide) |
AACAGTATCCACCAGAGTTCAGG |
TDP1 |
ENSG00000042088 |
-0.8060126640633125 |
[4] |
[0,0,0,0] |
-9 |
hSpCas9 |
positive selection |
4239967 |
89966169 |
89966192 |
14 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiGuide) |
GACGCTTGTTTCTTCAGCTCAGG |
TDP1 |
ENSG00000042088 |
0.3591324033507107 |
[1] |
[0,2,0,0] |
2 |
hSpCas9 |
positive selection |
4239968 |
89971179 |
89971202 |
14 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
AAGCCAATCCTGCTTGTGCATGG |
TDP1 |
ENSG00000042088 |
-0.1949406311327975 |
[2] |
[2,0] |
-4 |
hSpCas9 |
positive selection |
4302511 |
89967366 |
89967389 |
14 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
GTTTAACTACTGCTTTGACGTGG |
TDP1 |
ENSG00000042088 |
-0.3880260481613199 |
[2] |
[2,0] |
-7 |
hSpCas9 |
positive selection |
4302512 |
89971245 |
89971268 |
14 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
CAGAGAGAGATGTTCTCGTAAGG |
TDP1 |
ENSG00000042088 |
0.16296265774886684 |
[2] |
[2,1] |
3 |
hSpCas9 |
positive selection |
4302513 |
89967401 |
89967424 |
14 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
AACAGTATCCACCAGAGTTCAGG |
TDP1 |
ENSG00000042088 |
-0.3234040101945285 |
[3] |
[2,0] |
-6 |
hSpCas9 |
positive selection |
4366765 |
89966169 |
89966192 |
14 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
GACGCTTGTTTCTTCAGCTCAGG |
TDP1 |
ENSG00000042088 |
0.5829001398453457 |
[1] |
[2,2] |
9 |
hSpCas9 |
positive selection |
4366766 |
89966158 |
89966181 |
14 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
GAAACAAGCGTCCCAAATAAAGG |
TDP1 |
ENSG00000042088 |
0.14306115717667545 |
[1] |
[2,1] |
3 |
hSpCas9 |
positive selection |
4366767 |
89963539 |
89963561 |
14 |
+ |
27760321 |
OCIAML3 |
viability |
AAGACGAGTATGAGACATCAGG |
TDP1 |
ENSG00000042088 |
0.349869932207314 |
[0,0] |
[0,0] |
4 |
hSpCas9 |
negative selection |
4446069 |
89966158 |
89966180 |
14 |
- |
27760321 |
OCIAML3 |
viability |
AAACAAGCGTCCCAAATAAAGG |
TDP1 |
ENSG00000042088 |
0.9650288411519885 |
[84,70] |
[138,91] |
9 |
hSpCas9 |
negative selection |
4446070 |
89971194 |
89971216 |
14 |
+ |
27760321 |
OCIAML3 |
viability |
GTGCATGGTGATAAGCGAGAGG |
TDP1 |
ENSG00000042088 |
-0.3884009680324477 |
[289,258] |
[168,156] |
-4 |
hSpCas9 |
negative selection |
4446071 |
89980570 |
89980592 |
14 |
- |
27760321 |
OCIAML3 |
viability |
GGTGTGTATGACAACCCGGAGG |
TDP1 |
ENSG00000042088 |
1.083864101587005 |
[221,184] |
[249,447] |
9 |
hSpCas9 |
negative selection |
4446072 |
89984528 |
89984550 |
14 |
- |
27760321 |
OCIAML3 |
viability |
AGCAATTCGTGGGTATAAGGGG |
TDP1 |
ENSG00000042088 |
-0.31055482775294596 |
[265,222] |
[107,212] |
-3 |
hSpCas9 |
negative selection |
4446073 |
89963539 |
89963561 |
14 |
+ |
27760321 |
OCIAML2 |
viability |
AAGACGAGTATGAGACATCAGG |
TDP1 |
ENSG00000042088 |
0.3011245669422653 |
[0,0] |
[0,0] |
4 |
hSpCas9 |
negative selection |
4529532 |
89966158 |
89966180 |
14 |
- |
27760321 |
OCIAML2 |
viability |
AAACAAGCGTCCCAAATAAAGG |
TDP1 |
ENSG00000042088 |
-0.26769038844193327 |
[84,70] |
[43,62] |
-3 |
hSpCas9 |
negative selection |
4529533 |
89971194 |
89971216 |
14 |
+ |
27760321 |
OCIAML2 |
viability |
GTGCATGGTGATAAGCGAGAGG |
TDP1 |
ENSG00000042088 |
0.38849621272096724 |
[289,258] |
[247,345] |
5 |
hSpCas9 |
negative selection |
4529534 |
89980570 |
89980592 |
14 |
- |
27760321 |
OCIAML2 |
viability |
GGTGTGTATGACAACCCGGAGG |
TDP1 |
ENSG00000042088 |
0.11608462569773625 |
[221,184] |
[162,196] |
1 |
hSpCas9 |
negative selection |
4529535 |
89984528 |
89984550 |
14 |
- |
27760321 |
OCIAML2 |
viability |
AGCAATTCGTGGGTATAAGGGG |
TDP1 |
ENSG00000042088 |
0.3679020978963716 |
[265,222] |
[239,272] |
5 |
hSpCas9 |
negative selection |
4529536 |
89963539 |
89963561 |
14 |
+ |
27760321 |
MV411 |
viability |
AAGACGAGTATGAGACATCAGG |
TDP1 |
ENSG00000042088 |
0.5949485011219959 |
[0,0] |
[0,0] |
4 |
hSpCas9 |
negative selection |
4612995 |
89966158 |
89966180 |
14 |
- |
27760321 |
MV411 |
viability |
AAACAAGCGTCCCAAATAAAGG |
TDP1 |
ENSG00000042088 |
0.0359954751892726 |
[84,70] |
[0,129] |
0 |
hSpCas9 |
negative selection |
4612996 |
89971194 |
89971216 |
14 |
+ |
27760321 |
MV411 |
viability |
GTGCATGGTGATAAGCGAGAGG |
TDP1 |
ENSG00000042088 |
-1.2862535157518065 |
[289,258] |
[38,126] |
-7 |
hSpCas9 |
negative selection |
4612997 |
89980570 |
89980592 |
14 |
- |
27760321 |
MV411 |
viability |
GGTGTGTATGACAACCCGGAGG |
TDP1 |
ENSG00000042088 |
0.13403072698440888 |
[221,184] |
[83,240] |
0 |
hSpCas9 |
negative selection |
4612998 |
89984528 |
89984550 |
14 |
- |
27760321 |
MV411 |
viability |
AGCAATTCGTGGGTATAAGGGG |
TDP1 |
ENSG00000042088 |
-0.18899420707743242 |
[265,222] |
[114,179] |
-1 |
hSpCas9 |
negative selection |
4612999 |
89963539 |
89963561 |
14 |
+ |
27760321 |
HL60 |
viability |
AAGACGAGTATGAGACATCAGG |
TDP1 |
ENSG00000042088 |
0.2870783393278593 |
[0,0] |
[0,0] |
3 |
hSpCas9 |
negative selection |
4696458 |
89966158 |
89966180 |
14 |
- |
27760321 |
HL60 |
viability |
AAACAAGCGTCCCAAATAAAGG |
TDP1 |
ENSG00000042088 |
-2.1137713299726046 |
[84,70] |
[19,8] |
-9 |
hSpCas9 |
negative selection |
4696459 |
89971194 |
89971216 |
14 |
+ |
27760321 |
HL60 |
viability |
GTGCATGGTGATAAGCGAGAGG |
TDP1 |
ENSG00000042088 |
-0.5225849886329127 |
[289,258] |
[151,159] |
-5 |
hSpCas9 |
negative selection |
4696460 |
89980570 |
89980592 |
14 |
- |
27760321 |
HL60 |
viability |
GGTGTGTATGACAACCCGGAGG |
TDP1 |
ENSG00000042088 |
0.11547533334866567 |
[221,184] |
[206,149] |
1 |
hSpCas9 |
negative selection |
4696461 |
89984528 |
89984550 |
14 |
- |
27760321 |
HL60 |
viability |
AGCAATTCGTGGGTATAAGGGG |
TDP1 |
ENSG00000042088 |
-0.5757931210575027 |
[265,222] |
[115,151] |
-6 |
hSpCas9 |
negative selection |
4696462 |
89963539 |
89963561 |
14 |
+ |
27760321 |
HT1080 |
viability |
AAGACGAGTATGAGACATCAGG |
TDP1 |
ENSG00000042088 |
1.3056276939190559 |
[0,0] |
[0,0] |
7 |
hSpCas9 |
negative selection |
4779921 |
89966158 |
89966180 |
14 |
- |
27760321 |
HT1080 |
viability |
AAACAAGCGTCCCAAATAAAGG |
TDP1 |
ENSG00000042088 |
-1.0793621219334955 |
[70,55] |
[0,23] |
-4 |
hSpCas9 |
negative selection |
4779922 |
89971194 |
89971216 |
14 |
+ |
27760321 |
HT1080 |
viability |
GTGCATGGTGATAAGCGAGAGG |
TDP1 |
ENSG00000042088 |
1.7107029974352124 |
[258,201] |
[427,160] |
8 |
hSpCas9 |
negative selection |
4779923 |
89980570 |
89980592 |
14 |
- |
27760321 |
HT1080 |
viability |
GGTGTGTATGACAACCCGGAGG |
TDP1 |
ENSG00000042088 |
-0.028319630461671075 |
[184,144] |
[105,18] |
0 |
hSpCas9 |
negative selection |
4779924 |
89984528 |
89984550 |
14 |
- |
27760321 |
HT1080 |
viability |
AGCAATTCGTGGGTATAAGGGG |
TDP1 |
ENSG00000042088 |
-1.6588888450402761 |
[222,173] |
[46,0] |
-5 |
hSpCas9 |
negative selection |
4779925 |
89963539 |
89963561 |
14 |
+ |
27760321 |
HT29 |
viability after 7 days |
AAGACGAGTATGAGACATCAGG |
TDP1 |
ENSG00000042088 |
1.7080535000916273 |
[0,0] |
[11,0,0] |
9 |
hSpCas9 |
negative selection |
4863384 |
89966158 |
89966180 |
14 |
- |
27760321 |
HT29 |
viability after 7 days |
AAACAAGCGTCCCAAATAAAGG |
TDP1 |
ENSG00000042088 |
-0.4909576516568772 |
[70,55] |
[64,42,66] |
-6 |
hSpCas9 |
negative selection |
4863385 |
89971194 |
89971216 |
14 |
+ |
27760321 |
HT29 |
viability after 7 days |
GTGCATGGTGATAAGCGAGAGG |
TDP1 |
ENSG00000042088 |
0.037558986494803825 |
[258,201] |
[258,227,414] |
0 |
hSpCas9 |
negative selection |
4863386 |
89980570 |
89980592 |
14 |
- |
27760321 |
HT29 |
viability after 7 days |
GGTGTGTATGACAACCCGGAGG |
TDP1 |
ENSG00000042088 |
-0.002214129741005655 |
[184,144] |
[288,230,128] |
0 |
hSpCas9 |
negative selection |
4863387 |
89984528 |
89984550 |
14 |
- |
27760321 |
HT29 |
viability after 7 days |
AGCAATTCGTGGGTATAAGGGG |
TDP1 |
ENSG00000042088 |
0.014402093098932589 |
[222,173] |
[359,216,211] |
0 |
hSpCas9 |
negative selection |
4863388 |
89963539 |
89963561 |
14 |
+ |
27760321 |
HT29 |
viability after 25 days |
AAGACGAGTATGAGACATCAGG |
TDP1 |
ENSG00000042088 |
-0.21405457092746794 |
[0,0] |
[0,0,0] |
-2 |
hSpCas9 |
negative selection |
4946847 |
89966158 |
89966180 |
14 |
- |
27760321 |
HT29 |
viability after 25 days |
AAACAAGCGTCCCAAATAAAGG |
TDP1 |
ENSG00000042088 |
0.15785132180055061 |
[70,55] |
[29,118,98] |
1 |
hSpCas9 |
negative selection |
4946848 |
89971194 |
89971216 |
14 |
+ |
27760321 |
HT29 |
viability after 25 days |
GTGCATGGTGATAAGCGAGAGG |
TDP1 |
ENSG00000042088 |
0.38054379257339815 |
[258,201] |
[359,359,302] |
4 |
hSpCas9 |
negative selection |
4946849 |
89980570 |
89980592 |
14 |
- |
27760321 |
HT29 |
viability after 25 days |
GGTGTGTATGACAACCCGGAGG |
TDP1 |
ENSG00000042088 |
0.4695923085020737 |
[184,144] |
[235,379,157] |
5 |
hSpCas9 |
negative selection |
4946850 |
89984528 |
89984550 |
14 |
- |
27760321 |
HT29 |
viability after 25 days |
AGCAATTCGTGGGTATAAGGGG |
TDP1 |
ENSG00000042088 |
0.45923953496173064 |
[222,173] |
[218,254,484] |
5 |
hSpCas9 |
negative selection |
4946851 |
89963539 |
89963561 |
14 |
+ |
27760321 |
HT29 |
viability after 22 days |
AAGACGAGTATGAGACATCAGG |
TDP1 |
ENSG00000042088 |
-0.23137320278672746 |
[0,0] |
[0,0,0] |
-2 |
hSpCas9 |
negative selection |
5030310 |
89966158 |
89966180 |
14 |
- |
27760321 |
HT29 |
viability after 22 days |
AAACAAGCGTCCCAAATAAAGG |
TDP1 |
ENSG00000042088 |
-0.5932148457555448 |
[70,55] |
[16,73,55] |
-5 |
hSpCas9 |
negative selection |
5030311 |
89971194 |
89971216 |
14 |
+ |
27760321 |
HT29 |
viability after 22 days |
GTGCATGGTGATAAGCGAGAGG |
TDP1 |
ENSG00000042088 |
-0.585421540816401 |
[258,201] |
[189,206,134] |
-5 |
hSpCas9 |
negative selection |
5030312 |
89980570 |
89980592 |
14 |
- |
27760321 |
HT29 |
viability after 22 days |
GGTGTGTATGACAACCCGGAGG |
TDP1 |
ENSG00000042088 |
-0.13125153418953728 |
[184,144] |
[308,136,71] |
-1 |
hSpCas9 |
negative selection |
5030313 |
89984528 |
89984550 |
14 |
- |
27760321 |
HT29 |
viability after 22 days |
AGCAATTCGTGGGTATAAGGGG |
TDP1 |
ENSG00000042088 |
-0.3109958065990802 |
[222,173] |
[184,175,193] |
-3 |
hSpCas9 |
negative selection |
5030314 |
89963539 |
89963561 |
14 |
+ |
27760321 |
HT29 |
viability after 19 days |
AAGACGAGTATGAGACATCAGG |
TDP1 |
ENSG00000042088 |
-0.21553315036351428 |
[0,0] |
[0,0,0] |
-2 |
hSpCas9 |
negative selection |
5113773 |
89966158 |
89966180 |
14 |
- |
27760321 |
HT29 |
viability after 19 days |
AAACAAGCGTCCCAAATAAAGG |
TDP1 |
ENSG00000042088 |
-2.0208898885248834 |
[70,55] |
[1,30,18] |
-8 |
hSpCas9 |
negative selection |
5113774 |
89971194 |
89971216 |
14 |
+ |
27760321 |
HT29 |
viability after 19 days |
GTGCATGGTGATAAGCGAGAGG |
TDP1 |
ENSG00000042088 |
0.6212761002391091 |
[258,201] |
[515,419,295] |
6 |
hSpCas9 |
negative selection |
5113775 |
89980570 |
89980592 |
14 |
- |
27760321 |
HT29 |
viability after 19 days |
GGTGTGTATGACAACCCGGAGG |
TDP1 |
ENSG00000042088 |
-0.4034025825551286 |
[184,144] |
[291,124,30] |
-4 |
hSpCas9 |
negative selection |
5113776 |
89984528 |
89984550 |
14 |
- |
27760321 |
HT29 |
viability after 19 days |
AGCAATTCGTGGGTATAAGGGG |
TDP1 |
ENSG00000042088 |
-0.21045952944710777 |
[222,173] |
[338,190,77] |
-2 |
hSpCas9 |
negative selection |
5113777 |
89963539 |
89963561 |
14 |
+ |
27760321 |
HT29 |
viability after 16 days |
AAGACGAGTATGAGACATCAGG |
TDP1 |
ENSG00000042088 |
0.20426605822408384 |
[0,0] |
[1,0,0] |
2 |
hSpCas9 |
negative selection |
5197236 |
89966158 |
89966180 |
14 |
- |
27760321 |
HT29 |
viability after 16 days |
AAACAAGCGTCCCAAATAAAGG |
TDP1 |
ENSG00000042088 |
0.14864834918696168 |
[70,55] |
[49,104,77] |
1 |
hSpCas9 |
negative selection |
5197237 |
89971194 |
89971216 |
14 |
+ |
27760321 |
HT29 |
viability after 16 days |
GTGCATGGTGATAAGCGAGAGG |
TDP1 |
ENSG00000042088 |
0.1735863954213469 |
[258,201] |
[450,122,317] |
1 |
hSpCas9 |
negative selection |
5197238 |
89980570 |
89980592 |
14 |
- |
27760321 |
HT29 |
viability after 16 days |
GGTGTGTATGACAACCCGGAGG |
TDP1 |
ENSG00000042088 |
-0.05724271572874118 |
[184,144] |
[144,150,233] |
0 |
hSpCas9 |
negative selection |
5197239 |
89984528 |
89984550 |
14 |
- |
27760321 |
HT29 |
viability after 16 days |
AGCAATTCGTGGGTATAAGGGG |
TDP1 |
ENSG00000042088 |
0.32568294484722093 |
[222,173] |
[216,244,367] |
3 |
hSpCas9 |
negative selection |
5197240 |
89963539 |
89963561 |
14 |
+ |
27760321 |
HT29 |
viability after 13 days |
AAGACGAGTATGAGACATCAGG |
TDP1 |
ENSG00000042088 |
-0.23635609738673047 |
[0,0] |
[0,0,0] |
-3 |
hSpCas9 |
negative selection |
5280699 |
89966158 |
89966180 |
14 |
- |
27760321 |
HT29 |
viability after 13 days |
AAACAAGCGTCCCAAATAAAGG |
TDP1 |
ENSG00000042088 |
0.19539191194012018 |
[70,55] |
[20,158,73] |
2 |
hSpCas9 |
negative selection |
5280700 |
89971194 |
89971216 |
14 |
+ |
27760321 |
HT29 |
viability after 13 days |
GTGCATGGTGATAAGCGAGAGG |
TDP1 |
ENSG00000042088 |
0.18281506719181423 |
[258,201] |
[445,174,289] |
2 |
hSpCas9 |
negative selection |
5280701 |
89980570 |
89980592 |
14 |
- |
27760321 |
HT29 |
viability after 13 days |
GGTGTGTATGACAACCCGGAGG |
TDP1 |
ENSG00000042088 |
-0.1642976912586651 |
[184,144] |
[182,200,130] |
-2 |
hSpCas9 |
negative selection |
5280702 |
89984528 |
89984550 |
14 |
- |
27760321 |
HT29 |
viability after 13 days |
AGCAATTCGTGGGTATAAGGGG |
TDP1 |
ENSG00000042088 |
-0.053831093519782436 |
[222,173] |
[262,224,179] |
0 |
hSpCas9 |
negative selection |
5280703 |
89963539 |
89963561 |
14 |
+ |
27760321 |
HT29 |
viability after 10 days |
AAGACGAGTATGAGACATCAGG |
TDP1 |
ENSG00000042088 |
-0.34236740454707437 |
[0,0] |
[0,0,0] |
-4 |
hSpCas9 |
negative selection |
5364162 |
89966158 |
89966180 |
14 |
- |
27760321 |
HT29 |
viability after 10 days |
AAACAAGCGTCCCAAATAAAGG |
TDP1 |
ENSG00000042088 |
0.07645250331047837 |
[70,55] |
[53,77,117] |
1 |
hSpCas9 |
negative selection |
5364163 |
89971194 |
89971216 |
14 |
+ |
27760321 |
HT29 |
viability after 10 days |
GTGCATGGTGATAAGCGAGAGG |
TDP1 |
ENSG00000042088 |
0.04411033798074793 |
[258,201] |
[331,258,297] |
0 |
hSpCas9 |
negative selection |
5364164 |
89980570 |
89980592 |
14 |
- |
27760321 |
HT29 |
viability after 10 days |
GGTGTGTATGACAACCCGGAGG |
TDP1 |
ENSG00000042088 |
-0.456818799542833 |
[184,144] |
[134,88,222] |
-5 |
hSpCas9 |
negative selection |
5364165 |
89984528 |
89984550 |
14 |
- |
27760321 |
HT29 |
viability after 10 days |
AGCAATTCGTGGGTATAAGGGG |
TDP1 |
ENSG00000042088 |
-0.2661923435628585 |
[222,173] |
[297,160,158] |
-3 |
hSpCas9 |
negative selection |
5364166 |
89963539 |
89963561 |
14 |
+ |
27760321 |
MOLM13 |
viability |
AAGACGAGTATGAGACATCAGG |
TDP1 |
ENSG00000042088 |
0.8210053139495912 |
[0,0] |
[0,0] |
6 |
hSpCas9 |
negative selection |
5447625 |
89966158 |
89966180 |
14 |
- |
27760321 |
MOLM13 |
viability |
AAACAAGCGTCCCAAATAAAGG |
TDP1 |
ENSG00000042088 |
1.757292948847387 |
[84,70] |
[266,46] |
9 |
hSpCas9 |
negative selection |
5447626 |
89971194 |
89971216 |
14 |
+ |
27760321 |
MOLM13 |
viability |
GTGCATGGTGATAAGCGAGAGG |
TDP1 |
ENSG00000042088 |
-0.13770491874020774 |
[289,258] |
[199,89] |
-1 |
hSpCas9 |
negative selection |
5447627 |
89980570 |
89980592 |
14 |
- |
27760321 |
MOLM13 |
viability |
GGTGTGTATGACAACCCGGAGG |
TDP1 |
ENSG00000042088 |
-1.0452528696877783 |
[221,184] |
[49,59] |
-6 |
hSpCas9 |
negative selection |
5447628 |
89984528 |
89984550 |
14 |
- |
27760321 |
MOLM13 |
viability |
AGCAATTCGTGGGTATAAGGGG |
TDP1 |
ENSG00000042088 |
-1.3609094579012209 |
[265,222] |
[66,41] |
-7 |
hSpCas9 |
negative selection |
5447629 |
89955933 |
89955956 |
14 |
+ |
27661255 |
K562 |
viability |
GCGGGATCCGAGGCAAGCGTTGG |
TDP1 |
ENSG00000042088 |
0.13830762860788903 |
[287,368] |
[293,281] |
5 |
dCas9-KRAB |
negative selection |
5516619 |
89955888 |
89955911 |
14 |
- |
27661255 |
K562 |
viability |
GCGCGCAGTTCAAACCCTGGCGG |
TDP1 |
ENSG00000042088 |
-0.35072074612933246 |
[236,217] |
[159,127] |
-7 |
dCas9-KRAB |
negative selection |
5516620 |
89971179 |
89971202 |
14 |
+ |
27260156 |
BXPC3 |
viability |
AAGCCAATCCTGCTTGTGCATGG |
TDP1 |
ENSG00000042088 |
0.13440288599751915 |
[302] |
[340,310,418,317] |
3 |
hSpCas9 |
negative selection |
5574971 |
89967366 |
89967389 |
14 |
+ |
27260156 |
BXPC3 |
viability |
GTTTAACTACTGCTTTGACGTGG |
TDP1 |
ENSG00000042088 |
0.23317596960730988 |
[408] |
[469,488,519,536] |
5 |
hSpCas9 |
negative selection |
5574972 |
89971245 |
89971268 |
14 |
- |
27260156 |
BXPC3 |
viability |
CAGAGAGAGATGTTCTCGTAAGG |
TDP1 |
ENSG00000042088 |
0.2657137664229771 |
[276] |
[294,415,371,303] |
6 |
hSpCas9 |
negative selection |
5574973 |
89967401 |
89967424 |
14 |
+ |
27260156 |
BXPC3 |
viability |
AACAGTATCCACCAGAGTTCAGG |
TDP1 |
ENSG00000042088 |
-0.13576492839569154 |
[485] |
[368,461,415,629] |
-3 |
hSpCas9 |
negative selection |
5639225 |
89966169 |
89966192 |
14 |
+ |
27260156 |
BXPC3 |
viability |
GACGCTTGTTTCTTCAGCTCAGG |
TDP1 |
ENSG00000042088 |
0.1494623904176613 |
[158] |
[163,146,170,268] |
3 |
hSpCas9 |
negative selection |
5639226 |
89966158 |
89966181 |
14 |
- |
27260156 |
BXPC3 |
viability |
GAAACAAGCGTCCCAAATAAAGG |
TDP1 |
ENSG00000042088 |
-0.13506591788717803 |
[174] |
[120,173,139,243] |
-3 |
hSpCas9 |
negative selection |
5639227 |
89971179 |
89971202 |
14 |
+ |
27260156 |
A673 |
viability |
AAGCCAATCCTGCTTGTGCATGG |
TDP1 |
ENSG00000042088 |
0.30532887336796644 |
[302] |
[547,344,414,506] |
7 |
hSpCas9 |
negative selection |
5696222 |
89967366 |
89967389 |
14 |
+ |
27260156 |
A673 |
viability |
GTTTAACTACTGCTTTGACGTGG |
TDP1 |
ENSG00000042088 |
-0.025741099924262545 |
[408] |
[496,491,419,523] |
0 |
hSpCas9 |
negative selection |
5696223 |
89971245 |
89971268 |
14 |
- |
27260156 |
A673 |
viability |
CAGAGAGAGATGTTCTCGTAAGG |
TDP1 |
ENSG00000042088 |
0.20912876265872615 |
[276] |
[390,409,432,297] |
5 |
hSpCas9 |
negative selection |
5696224 |
89967401 |
89967424 |
14 |
+ |
27260156 |
A673 |
viability |
AACAGTATCCACCAGAGTTCAGG |
TDP1 |
ENSG00000042088 |
-0.17003267588514825 |
[485] |
[513,412,612,535] |
-4 |
hSpCas9 |
negative selection |
5760476 |
89966169 |
89966192 |
14 |
+ |
27260156 |
A673 |
viability |
GACGCTTGTTTCTTCAGCTCAGG |
TDP1 |
ENSG00000042088 |
0.34927677238631794 |
[158] |
[277,200,245,252] |
7 |
hSpCas9 |
negative selection |
5760477 |
89966158 |
89966181 |
14 |
- |
27260156 |
A673 |
viability |
GAAACAAGCGTCCCAAATAAAGG |
TDP1 |
ENSG00000042088 |
-0.06957780057417762 |
[174] |
[215,245,178,157] |
-2 |
hSpCas9 |
negative selection |
5760478 |
89971179 |
89971202 |
14 |
+ |
27260156 |
A375 |
viability |
AAGCCAATCCTGCTTGTGCATGG |
TDP1 |
ENSG00000042088 |
0.31502094834237676 |
[302] |
[506,546,338,387] |
4 |
hSpCas9 |
negative selection |
5817473 |
89967366 |
89967389 |
14 |
+ |
27260156 |
A375 |
viability |
GTTTAACTACTGCTTTGACGTGG |
TDP1 |
ENSG00000042088 |
0.3745288566670128 |
[408] |
[524,668,805,495] |
5 |
hSpCas9 |
negative selection |
5817474 |
89971245 |
89971268 |
14 |
- |
27260156 |
A375 |
viability |
CAGAGAGAGATGTTCTCGTAAGG |
TDP1 |
ENSG00000042088 |
0.11950523668736557 |
[276] |
[265,290,463,371] |
1 |
hSpCas9 |
negative selection |
5817475 |
89967401 |
89967424 |
14 |
+ |
27260156 |
A375 |
viability |
AACAGTATCCACCAGAGTTCAGG |
TDP1 |
ENSG00000042088 |
0.014080891460519752 |
[485] |
[609,461,764,452] |
0 |
hSpCas9 |
negative selection |
5881727 |
89966169 |
89966192 |
14 |
+ |
27260156 |
A375 |
viability |
GACGCTTGTTTCTTCAGCTCAGG |
TDP1 |
ENSG00000042088 |
0.4852984554528681 |
[158] |
[276,359,239,184] |
7 |
hSpCas9 |
negative selection |
5881728 |
89966158 |
89966181 |
14 |
- |
27260156 |
A375 |
viability |
GAAACAAGCGTCCCAAATAAAGG |
TDP1 |
ENSG00000042088 |
0.229857630255766 |
[174] |
[146,229,395,188] |
3 |
hSpCas9 |
negative selection |
5881729 |
89971179 |
89971202 |
14 |
+ |
27260156 |
COLO741 |
viability |
AAGCCAATCCTGCTTGTGCATGG |
TDP1 |
ENSG00000042088 |
0.35770396400948185 |
[302] |
[573,512,412] |
7 |
hSpCas9 |
negative selection |
5938724 |
89967366 |
89967389 |
14 |
+ |
27260156 |
COLO741 |
viability |
GTTTAACTACTGCTTTGACGTGG |
TDP1 |
ENSG00000042088 |
-0.045192374143748715 |
[408] |
[552,488,481] |
-1 |
hSpCas9 |
negative selection |
5938725 |
89971245 |
89971268 |
14 |
- |
27260156 |
COLO741 |
viability |
CAGAGAGAGATGTTCTCGTAAGG |
TDP1 |
ENSG00000042088 |
0.45948284062123035 |
[276] |
[544,421,495] |
8 |
hSpCas9 |
negative selection |
5938726 |
89967401 |
89967424 |
14 |
+ |
27260156 |
COLO741 |
viability |
AACAGTATCCACCAGAGTTCAGG |
TDP1 |
ENSG00000042088 |
-0.21709680200533524 |
[485] |
[390,669,528] |
-5 |
hSpCas9 |
negative selection |
6002978 |
89966169 |
89966192 |
14 |
+ |
27260156 |
COLO741 |
viability |
GACGCTTGTTTCTTCAGCTCAGG |
TDP1 |
ENSG00000042088 |
0.22725780098644832 |
[158] |
[297,308,119] |
5 |
hSpCas9 |
negative selection |
6002979 |
89966158 |
89966181 |
14 |
- |
27260156 |
COLO741 |
viability |
GAAACAAGCGTCCCAAATAAAGG |
TDP1 |
ENSG00000042088 |
0.29633793450447254 |
[174] |
[271,360,195] |
6 |
hSpCas9 |
negative selection |
6002980 |
89971179 |
89971202 |
14 |
+ |
27260156 |
CAL120 |
viability |
AAGCCAATCCTGCTTGTGCATGG |
TDP1 |
ENSG00000042088 |
0.3557627459467351 |
[302] |
[394,437,598] |
5 |
hSpCas9 |
negative selection |
6059975 |
89967366 |
89967389 |
14 |
+ |
27260156 |
CAL120 |
viability |
GTTTAACTACTGCTTTGACGTGG |
TDP1 |
ENSG00000042088 |
0.013964107877704884 |
[408] |
[559,561,427] |
0 |
hSpCas9 |
negative selection |
6059976 |
89971245 |
89971268 |
14 |
- |
27260156 |
CAL120 |
viability |
CAGAGAGAGATGTTCTCGTAAGG |
TDP1 |
ENSG00000042088 |
-0.38707012555941045 |
[276] |
[372,164,268] |
-5 |
hSpCas9 |
negative selection |
6059977 |
89967401 |
89967424 |
14 |
+ |
27260156 |
CAL120 |
viability |
AACAGTATCCACCAGAGTTCAGG |
TDP1 |
ENSG00000042088 |
0.09952477544051025 |
[485] |
[558,597,770] |
1 |
hSpCas9 |
negative selection |
6124229 |
89966169 |
89966192 |
14 |
+ |
27260156 |
CAL120 |
viability |
GACGCTTGTTTCTTCAGCTCAGG |
TDP1 |
ENSG00000042088 |
0.738595958118643 |
[158] |
[584,134,308] |
9 |
hSpCas9 |
negative selection |
6124230 |
89966158 |
89966181 |
14 |
- |
27260156 |
CAL120 |
viability |
GAAACAAGCGTCCCAAATAAAGG |
TDP1 |
ENSG00000042088 |
-0.006786851819625683 |
[174] |
[274,227,156] |
0 |
hSpCas9 |
negative selection |
6124231 |
89971179 |
89971202 |
14 |
+ |
27260156 |
CADOES1 |
viability |
AAGCCAATCCTGCTTGTGCATGG |
TDP1 |
ENSG00000042088 |
0.04569839813866883 |
[302] |
[315,331,263,249] |
0 |
hSpCas9 |
negative selection |
6181226 |
89967366 |
89967389 |
14 |
+ |
27260156 |
CADOES1 |
viability |
GTTTAACTACTGCTTTGACGTGG |
TDP1 |
ENSG00000042088 |
-0.3719161754365992 |
[408] |
[198,370,240,367] |
-6 |
hSpCas9 |
negative selection |
6181227 |
89971245 |
89971268 |
14 |
- |
27260156 |
CADOES1 |
viability |
CAGAGAGAGATGTTCTCGTAAGG |
TDP1 |
ENSG00000042088 |
-0.09953590261330081 |
[276] |
[221,190,275,273] |
-2 |
hSpCas9 |
negative selection |
6181228 |
89967401 |
89967424 |
14 |
+ |
27260156 |
CADOES1 |
viability |
AACAGTATCCACCAGAGTTCAGG |
TDP1 |
ENSG00000042088 |
-0.12173379837707154 |
[485] |
[411,528,381,335] |
-2 |
hSpCas9 |
negative selection |
6245480 |
89966169 |
89966192 |
14 |
+ |
27260156 |
CADOES1 |
viability |
GACGCTTGTTTCTTCAGCTCAGG |
TDP1 |
ENSG00000042088 |
0.5781202569566655 |
[158] |
[268,256,162,192] |
8 |
hSpCas9 |
negative selection |
6245481 |
89966158 |
89966181 |
14 |
- |
27260156 |
CADOES1 |
viability |
GAAACAAGCGTCCCAAATAAAGG |
TDP1 |
ENSG00000042088 |
-0.3743903648711182 |
[174] |
[157,123,123,94] |
-6 |
hSpCas9 |
negative selection |
6245482 |
89971179 |
89971202 |
14 |
+ |
27260156 |
EWS502 |
viability |
AAGCCAATCCTGCTTGTGCATGG |
TDP1 |
ENSG00000042088 |
0.7658536982618784 |
[302] |
[474,652,436,623] |
9 |
hSpCas9 |
negative selection |
6302477 |
89967366 |
89967389 |
14 |
+ |
27260156 |
EWS502 |
viability |
GTTTAACTACTGCTTTGACGTGG |
TDP1 |
ENSG00000042088 |
0.22339980724503608 |
[408] |
[383,553,511,589] |
4 |
hSpCas9 |
negative selection |
6302478 |
89971245 |
89971268 |
14 |
- |
27260156 |
EWS502 |
viability |
CAGAGAGAGATGTTCTCGTAAGG |
TDP1 |
ENSG00000042088 |
0.15279629964192343 |
[276] |
[211,359,437,305] |
2 |
hSpCas9 |
negative selection |
6302479 |
89967401 |
89967424 |
14 |
+ |
27260156 |
EWS502 |
viability |
AACAGTATCCACCAGAGTTCAGG |
TDP1 |
ENSG00000042088 |
-0.38437654660580317 |
[485] |
[367,305,345,574] |
-6 |
hSpCas9 |
negative selection |
6366731 |
89966169 |
89966192 |
14 |
+ |
27260156 |
EWS502 |
viability |
GACGCTTGTTTCTTCAGCTCAGG |
TDP1 |
ENSG00000042088 |
0.5004996975389333 |
[158] |
[197,272,288,192] |
8 |
hSpCas9 |
negative selection |
6366732 |
89966158 |
89966181 |
14 |
- |
27260156 |
EWS502 |
viability |
GAAACAAGCGTCCCAAATAAAGG |
TDP1 |
ENSG00000042088 |
-0.3829482921838365 |
[174] |
[90,216,166,92] |
-6 |
hSpCas9 |
negative selection |
6366733 |
89971179 |
89971202 |
14 |
+ |
27260156 |
EW8 |
viability |
AAGCCAATCCTGCTTGTGCATGG |
TDP1 |
ENSG00000042088 |
0.04555740461313318 |
[302] |
[400,180,229,220] |
0 |
hSpCas9 |
negative selection |
6423728 |
89967366 |
89967389 |
14 |
+ |
27260156 |
EW8 |
viability |
GTTTAACTACTGCTTTGACGTGG |
TDP1 |
ENSG00000042088 |
-0.014237589462685357 |
[408] |
[321,410,314,265] |
0 |
hSpCas9 |
negative selection |
6423729 |
89971245 |
89971268 |
14 |
- |
27260156 |
EW8 |
viability |
CAGAGAGAGATGTTCTCGTAAGG |
TDP1 |
ENSG00000042088 |
0.2572058731559411 |
[276] |
[309,247,219,306] |
5 |
hSpCas9 |
negative selection |
6423730 |
89967401 |
89967424 |
14 |
+ |
27260156 |
EW8 |
viability |
AACAGTATCCACCAGAGTTCAGG |
TDP1 |
ENSG00000042088 |
-0.19038983594513637 |
[485] |
[498,358,255,297] |
-4 |
hSpCas9 |
negative selection |
6487982 |
89966169 |
89966192 |
14 |
+ |
27260156 |
EW8 |
viability |
GACGCTTGTTTCTTCAGCTCAGG |
TDP1 |
ENSG00000042088 |
0.26632162960914885 |
[158] |
[161,164,108,191] |
5 |
hSpCas9 |
negative selection |
6487983 |
89966158 |
89966181 |
14 |
- |
27260156 |
EW8 |
viability |
GAAACAAGCGTCCCAAATAAAGG |
TDP1 |
ENSG00000042088 |
0.2110328905697949 |
[174] |
[245,150,111,164] |
4 |
hSpCas9 |
negative selection |
6487984 |
89971179 |
89971202 |
14 |
+ |
27260156 |
CORL105 |
viability |
AAGCCAATCCTGCTTGTGCATGG |
TDP1 |
ENSG00000042088 |
0.6470303499149289 |
[302] |
[437,652,663,477] |
9 |
hSpCas9 |
negative selection |
6544979 |
89967366 |
89967389 |
14 |
+ |
27260156 |
CORL105 |
viability |
GTTTAACTACTGCTTTGACGTGG |
TDP1 |
ENSG00000042088 |
-0.2542579741890227 |
[408] |
[385,328,437,458] |
-5 |
hSpCas9 |
negative selection |
6544980 |
89971245 |
89971268 |
14 |
- |
27260156 |
CORL105 |
viability |
CAGAGAGAGATGTTCTCGTAAGG |
TDP1 |
ENSG00000042088 |
-0.016024037049905737 |
[276] |
[329,392,189,347] |
0 |
hSpCas9 |
negative selection |
6544981 |
89967401 |
89967424 |
14 |
+ |
27260156 |
CORL105 |
viability |
AACAGTATCCACCAGAGTTCAGG |
TDP1 |
ENSG00000042088 |
0.0062357962317487955 |
[485] |
[371,449,935,579] |
0 |
hSpCas9 |
negative selection |
6609233 |
89966169 |
89966192 |
14 |
+ |
27260156 |
CORL105 |
viability |
GACGCTTGTTTCTTCAGCTCAGG |
TDP1 |
ENSG00000042088 |
0.21897396272111802 |
[158] |
[237,246,254,132] |
4 |
hSpCas9 |
negative selection |
6609234 |
89966158 |
89966181 |
14 |
- |
27260156 |
CORL105 |
viability |
GAAACAAGCGTCCCAAATAAAGG |
TDP1 |
ENSG00000042088 |
-0.1509709698695305 |
[174] |
[229,164,202,144] |
-3 |
hSpCas9 |
negative selection |
6609235 |
89971179 |
89971202 |
14 |
+ |
27260156 |
HS294T |
viability |
AAGCCAATCCTGCTTGTGCATGG |
TDP1 |
ENSG00000042088 |
0.7851567080828353 |
[302] |
[174,221,128,298] |
8 |
hSpCas9 |
negative selection |
6666230 |
89967366 |
89967389 |
14 |
+ |
27260156 |
HS294T |
viability |
GTTTAACTACTGCTTTGACGTGG |
TDP1 |
ENSG00000042088 |
0.031193459084124242 |
[408] |
[117,117,266,145] |
0 |
hSpCas9 |
negative selection |
6666231 |
89971245 |
89971268 |
14 |
- |
27260156 |
HS294T |
viability |
CAGAGAGAGATGTTCTCGTAAGG |
TDP1 |
ENSG00000042088 |
-0.16952728479055046 |
[276] |
[105,46,93,141] |
-2 |
hSpCas9 |
negative selection |
6666232 |
89967401 |
89967424 |
14 |
+ |
27260156 |
HS294T |
viability |
AACAGTATCCACCAGAGTTCAGG |
TDP1 |
ENSG00000042088 |
0.05070066591868576 |
[485] |
[188,203,170,217] |
0 |
hSpCas9 |
negative selection |
6730484 |
89966169 |
89966192 |
14 |
+ |
27260156 |
HS294T |
viability |
GACGCTTGTTTCTTCAGCTCAGG |
TDP1 |
ENSG00000042088 |
-0.4001689593000861 |
[158] |
[50,26,63,43] |
-5 |
hSpCas9 |
negative selection |
6730485 |
89966158 |
89966181 |
14 |
- |
27260156 |
HS294T |
viability |
GAAACAAGCGTCCCAAATAAAGG |
TDP1 |
ENSG00000042088 |
0.8930095376239731 |
[174] |
[152,74,78,207] |
9 |
hSpCas9 |
negative selection |
6730486 |
89971179 |
89971202 |
14 |
+ |
27260156 |
HCC44 |
viability |
AAGCCAATCCTGCTTGTGCATGG |
TDP1 |
ENSG00000042088 |
0.5253825785231486 |
[302] |
[710,429,432,415] |
8 |
hSpCas9 |
negative selection |
6787481 |
89967366 |
89967389 |
14 |
+ |
27260156 |
HCC44 |
viability |
GTTTAACTACTGCTTTGACGTGG |
TDP1 |
ENSG00000042088 |
0.051810701674217086 |
[408] |
[574,226,883,346] |
0 |
hSpCas9 |
negative selection |
6787482 |
89971245 |
89971268 |
14 |
- |
27260156 |
HCC44 |
viability |
CAGAGAGAGATGTTCTCGTAAGG |
TDP1 |
ENSG00000042088 |
0.42575889812507994 |
[276] |
[378,494,550,267] |
7 |
hSpCas9 |
negative selection |
6787483 |
89967401 |
89967424 |
14 |
+ |
27260156 |
HCC44 |
viability |
AACAGTATCCACCAGAGTTCAGG |
TDP1 |
ENSG00000042088 |
-0.13098214908023248 |
[485] |
[381,342,1012,369] |
-2 |
hSpCas9 |
negative selection |
6851735 |
89966169 |
89966192 |
14 |
+ |
27260156 |
HCC44 |
viability |
GACGCTTGTTTCTTCAGCTCAGG |
TDP1 |
ENSG00000042088 |
0.4394171997842269 |
[158] |
[199,165,296,323] |
7 |
hSpCas9 |
negative selection |
6851736 |
89966158 |
89966181 |
14 |
- |
27260156 |
HCC44 |
viability |
GAAACAAGCGTCCCAAATAAAGG |
TDP1 |
ENSG00000042088 |
-0.2909571137334348 |
[174] |
[272,124,125,131] |
-4 |
hSpCas9 |
negative selection |
6851737 |
89971179 |
89971202 |
14 |
+ |
27260156 |
G402 |
viability |
AAGCCAATCCTGCTTGTGCATGG |
TDP1 |
ENSG00000042088 |
0.4627319787036453 |
[302] |
[737,582,530,234] |
6 |
hSpCas9 |
negative selection |
6908732 |
89967366 |
89967389 |
14 |
+ |
27260156 |
G402 |
viability |
GTTTAACTACTGCTTTGACGTGG |
TDP1 |
ENSG00000042088 |
0.2756326176225554 |
[408] |
[903,550,577,429] |
3 |
hSpCas9 |
negative selection |
6908733 |
89971245 |
89971268 |
14 |
- |
27260156 |
G402 |
viability |
CAGAGAGAGATGTTCTCGTAAGG |
TDP1 |
ENSG00000042088 |
-0.3862244554900347 |
[276] |
[119,108,416,353] |
-5 |
hSpCas9 |
negative selection |
6908734 |
89967401 |
89967424 |
14 |
+ |
27260156 |
G402 |
viability |
AACAGTATCCACCAGAGTTCAGG |
TDP1 |
ENSG00000042088 |
0.02874749070912512 |
[485] |
[394,441,751,779] |
0 |
hSpCas9 |
negative selection |
6972986 |
89966169 |
89966192 |
14 |
+ |
27260156 |
G402 |
viability |
GACGCTTGTTTCTTCAGCTCAGG |
TDP1 |
ENSG00000042088 |
0.49495916936469486 |
[158] |
[492,186,307,137] |
6 |
hSpCas9 |
negative selection |
6972987 |
89966158 |
89966181 |
14 |
- |
27260156 |
G402 |
viability |
GAAACAAGCGTCCCAAATAAAGG |
TDP1 |
ENSG00000042088 |
-0.24897920949561536 |
[174] |
[144,207,124,233] |
-3 |
hSpCas9 |
negative selection |
6972988 |
89971179 |
89971202 |
14 |
+ |
27260156 |
L33 |
viability |
AAGCCAATCCTGCTTGTGCATGG |
TDP1 |
ENSG00000042088 |
0.3652571858346243 |
[302] |
[410,181,220,353] |
7 |
hSpCas9 |
negative selection |
7029983 |
89967366 |
89967389 |
14 |
+ |
27260156 |
L33 |
viability |
GTTTAACTACTGCTTTGACGTGG |
TDP1 |
ENSG00000042088 |
-0.11577323470632528 |
[408] |
[323,124,262,462] |
-3 |
hSpCas9 |
negative selection |
7029984 |
89971245 |
89971268 |
14 |
- |
27260156 |
L33 |
viability |
CAGAGAGAGATGTTCTCGTAAGG |
TDP1 |
ENSG00000042088 |
0.17438501320158406 |
[276] |
[333,156,168,263] |
4 |
hSpCas9 |
negative selection |
7029985 |
89967401 |
89967424 |
14 |
+ |
27260156 |
L33 |
viability |
AACAGTATCCACCAGAGTTCAGG |
TDP1 |
ENSG00000042088 |
0.15730405663529623 |
[485] |
[497,236,354,527] |
3 |
hSpCas9 |
negative selection |
7094237 |
89966169 |
89966192 |
14 |
+ |
27260156 |
L33 |
viability |
GACGCTTGTTTCTTCAGCTCAGG |
TDP1 |
ENSG00000042088 |
0.20399393885551098 |
[158] |
[144,51,103,294] |
4 |
hSpCas9 |
negative selection |
7094238 |
89966158 |
89966181 |
14 |
- |
27260156 |
L33 |
viability |
GAAACAAGCGTCCCAAATAAAGG |
TDP1 |
ENSG00000042088 |
0.09918533668806617 |
[174] |
[151,62,183,152] |
2 |
hSpCas9 |
negative selection |
7094239 |
89971179 |
89971202 |
14 |
+ |
27260156 |
K562 |
viability |
AAGCCAATCCTGCTTGTGCATGG |
TDP1 |
ENSG00000042088 |
0.2398698430673601 |
[302] |
[453,556,128,169] |
3 |
hSpCas9 |
negative selection |
7151234 |
89967366 |
89967389 |
14 |
+ |
27260156 |
K562 |
viability |
GTTTAACTACTGCTTTGACGTGG |
TDP1 |
ENSG00000042088 |
0.13132976466764076 |
[408] |
[252,260,558,485] |
1 |
hSpCas9 |
negative selection |
7151235 |
89971245 |
89971268 |
14 |
- |
27260156 |
K562 |
viability |
CAGAGAGAGATGTTCTCGTAAGG |
TDP1 |
ENSG00000042088 |
-0.020276386833783078 |
[276] |
[422,244,134,186] |
0 |
hSpCas9 |
negative selection |
7151236 |
89967401 |
89967424 |
14 |
+ |
27260156 |
K562 |
viability |
AACAGTATCCACCAGAGTTCAGG |
TDP1 |
ENSG00000042088 |
0.608199615545403 |
[485] |
[754,928,371,599] |
7 |
hSpCas9 |
negative selection |
7215488 |
89966169 |
89966192 |
14 |
+ |
27260156 |
K562 |
viability |
GACGCTTGTTTCTTCAGCTCAGG |
TDP1 |
ENSG00000042088 |
0.3267559281532031 |
[158] |
[374,118,140,94] |
4 |
hSpCas9 |
negative selection |
7215489 |
89966158 |
89966181 |
14 |
- |
27260156 |
K562 |
viability |
GAAACAAGCGTCCCAAATAAAGG |
TDP1 |
ENSG00000042088 |
0.6334190563369757 |
[174] |
[89,176,307,357] |
7 |
hSpCas9 |
negative selection |
7215490 |
89971179 |
89971202 |
14 |
+ |
27260156 |
HT29 |
viability |
AAGCCAATCCTGCTTGTGCATGG |
TDP1 |
ENSG00000042088 |
0.4687671274323926 |
[302] |
[646,489,548,374] |
8 |
hSpCas9 |
negative selection |
7272485 |
89967366 |
89967389 |
14 |
+ |
27260156 |
HT29 |
viability |
GTTTAACTACTGCTTTGACGTGG |
TDP1 |
ENSG00000042088 |
0.12048980840567931 |
[408] |
[554,681,498,446] |
2 |
hSpCas9 |
negative selection |
7272486 |
89971245 |
89971268 |
14 |
- |
27260156 |
HT29 |
viability |
CAGAGAGAGATGTTCTCGTAAGG |
TDP1 |
ENSG00000042088 |
0.2533386252299916 |
[276] |
[479,406,409,321] |
5 |
hSpCas9 |
negative selection |
7272487 |
89967401 |
89967424 |
14 |
+ |
27260156 |
HT29 |
viability |
AACAGTATCCACCAGAGTTCAGG |
TDP1 |
ENSG00000042088 |
0.16755703254426152 |
[485] |
[742,702,523,685] |
3 |
hSpCas9 |
negative selection |
7336739 |
89966169 |
89966192 |
14 |
+ |
27260156 |
HT29 |
viability |
GACGCTTGTTTCTTCAGCTCAGG |
TDP1 |
ENSG00000042088 |
0.21487878122789916 |
[158] |
[237,254,169,234] |
4 |
hSpCas9 |
negative selection |
7336740 |
89966158 |
89966181 |
14 |
- |
27260156 |
HT29 |
viability |
GAAACAAGCGTCCCAAATAAAGG |
TDP1 |
ENSG00000042088 |
0.35902947564537824 |
[174] |
[178,272,274,345] |
7 |
hSpCas9 |
negative selection |
7336741 |
89971179 |
89971202 |
14 |
+ |
27260156 |
MHHES1 |
viability |
AAGCCAATCCTGCTTGTGCATGG |
TDP1 |
ENSG00000042088 |
0.2312412002580454 |
[302] |
[500,347,286,450] |
4 |
hSpCas9 |
negative selection |
7393736 |
89967366 |
89967389 |
14 |
+ |
27260156 |
MHHES1 |
viability |
GTTTAACTACTGCTTTGACGTGG |
TDP1 |
ENSG00000042088 |
-0.18438703610969576 |
[408] |
[495,410,487,262] |
-3 |
hSpCas9 |
negative selection |
7393737 |
89971245 |
89971268 |
14 |
- |
27260156 |
MHHES1 |
viability |
CAGAGAGAGATGTTCTCGTAAGG |
TDP1 |
ENSG00000042088 |
0.4861676010805236 |
[276] |
[423,481,470,377] |
8 |
hSpCas9 |
negative selection |
7393738 |
89967401 |
89967424 |
14 |
+ |
27260156 |
MHHES1 |
viability |
AACAGTATCCACCAGAGTTCAGG |
TDP1 |
ENSG00000042088 |
-0.040493744120962176 |
[485] |
[555,502,725,370] |
0 |
hSpCas9 |
negative selection |
7457990 |
89966169 |
89966192 |
14 |
+ |
27260156 |
MHHES1 |
viability |
GACGCTTGTTTCTTCAGCTCAGG |
TDP1 |
ENSG00000042088 |
0.07016527696514774 |
[158] |
[310,191,105,159] |
1 |
hSpCas9 |
negative selection |
7457991 |
89966158 |
89966181 |
14 |
- |
27260156 |
MHHES1 |
viability |
GAAACAAGCGTCCCAAATAAAGG |
TDP1 |
ENSG00000042088 |
-0.016708603062862037 |
[174] |
[143,335,211,110] |
0 |
hSpCas9 |
negative selection |
7457992 |
89971179 |
89971202 |
14 |
+ |
27260156 |
MEWO |
viability |
AAGCCAATCCTGCTTGTGCATGG |
TDP1 |
ENSG00000042088 |
0.2821235620164079 |
[302] |
[457,339,257] |
6 |
hSpCas9 |
negative selection |
7514987 |
89967366 |
89967389 |
14 |
+ |
27260156 |
MEWO |
viability |
GTTTAACTACTGCTTTGACGTGG |
TDP1 |
ENSG00000042088 |
0.5295367245761249 |
[408] |
[606,443,616] |
9 |
hSpCas9 |
negative selection |
7514988 |
89971245 |
89971268 |
14 |
- |
27260156 |
MEWO |
viability |
CAGAGAGAGATGTTCTCGTAAGG |
TDP1 |
ENSG00000042088 |
0.20953838177910578 |
[276] |
[372,324,214] |
4 |
hSpCas9 |
negative selection |
7514989 |
89967401 |
89967424 |
14 |
+ |
27260156 |
MEWO |
viability |
AACAGTATCCACCAGAGTTCAGG |
TDP1 |
ENSG00000042088 |
-0.3045454840858945 |
[485] |
[356,413,330] |
-6 |
hSpCas9 |
negative selection |
7579241 |
89966169 |
89966192 |
14 |
+ |
27260156 |
MEWO |
viability |
GACGCTTGTTTCTTCAGCTCAGG |
TDP1 |
ENSG00000042088 |
0.04753843220925624 |
[158] |
[198,142,127] |
1 |
hSpCas9 |
negative selection |
7579242 |
89966158 |
89966181 |
14 |
- |
27260156 |
MEWO |
viability |
GAAACAAGCGTCCCAAATAAAGG |
TDP1 |
ENSG00000042088 |
0.2831474900555926 |
[174] |
[213,95,290] |
6 |
hSpCas9 |
negative selection |
7579243 |
89971179 |
89971202 |
14 |
+ |
27260156 |
LNCAPCLONEFGC |
viability |
AAGCCAATCCTGCTTGTGCATGG |
TDP1 |
ENSG00000042088 |
0.20382322933259034 |
[302] |
[338,300,296,324] |
3 |
hSpCas9 |
negative selection |
7636238 |
89967366 |
89967389 |
14 |
+ |
27260156 |
LNCAPCLONEFGC |
viability |
GTTTAACTACTGCTTTGACGTGG |
TDP1 |
ENSG00000042088 |
-0.12741907765215893 |
[408] |
[341,249,363,409] |
-2 |
hSpCas9 |
negative selection |
7636239 |
89971245 |
89971268 |
14 |
- |
27260156 |
LNCAPCLONEFGC |
viability |
CAGAGAGAGATGTTCTCGTAAGG |
TDP1 |
ENSG00000042088 |
-0.05602679574429881 |
[276] |
[291,196,232,243] |
-1 |
hSpCas9 |
negative selection |
7636240 |
89967401 |
89967424 |
14 |
+ |
27260156 |
LNCAPCLONEFGC |
viability |
AACAGTATCCACCAGAGTTCAGG |
TDP1 |
ENSG00000042088 |
-0.23628875952097406 |
[485] |
[391,265,619,259] |
-4 |
hSpCas9 |
negative selection |
7700492 |
89966169 |
89966192 |
14 |
+ |
27260156 |
LNCAPCLONEFGC |
viability |
GACGCTTGTTTCTTCAGCTCAGG |
TDP1 |
ENSG00000042088 |
0.3535314538592873 |
[158] |
[214,179,145,188] |
5 |
hSpCas9 |
negative selection |
7700493 |
89966158 |
89966181 |
14 |
- |
27260156 |
LNCAPCLONEFGC |
viability |
GAAACAAGCGTCCCAAATAAAGG |
TDP1 |
ENSG00000042088 |
-0.08785808274183804 |
[174] |
[135,177,122,153] |
-1 |
hSpCas9 |
negative selection |
7700494 |
89971179 |
89971202 |
14 |
+ |
27260156 |
PANC0327 |
viability |
AAGCCAATCCTGCTTGTGCATGG |
TDP1 |
ENSG00000042088 |
0.2373831882996314 |
[302] |
[430,152,498,216] |
3 |
hSpCas9 |
negative selection |
7757489 |
89967366 |
89967389 |
14 |
+ |
27260156 |
PANC0327 |
viability |
GTTTAACTACTGCTTTGACGTGG |
TDP1 |
ENSG00000042088 |
-0.4969120669588694 |
[408] |
[219,154,342,321] |
-6 |
hSpCas9 |
negative selection |
7757490 |
89971245 |
89971268 |
14 |
- |
27260156 |
PANC0327 |
viability |
CAGAGAGAGATGTTCTCGTAAGG |
TDP1 |
ENSG00000042088 |
0.6369482633684019 |
[276] |
[458,262,346,482] |
8 |
hSpCas9 |
negative selection |
7757491 |
89967401 |
89967424 |
14 |
+ |
27260156 |
PANC0327 |
viability |
AACAGTATCCACCAGAGTTCAGG |
TDP1 |
ENSG00000042088 |
0.44992165898693914 |
[485] |
[296,1033,391,553] |
6 |
hSpCas9 |
negative selection |
7821743 |
89966169 |
89966192 |
14 |
+ |
27260156 |
PANC0327 |
viability |
GACGCTTGTTTCTTCAGCTCAGG |
TDP1 |
ENSG00000042088 |
0.23681019432776407 |
[158] |
[287,109,174,109] |
3 |
hSpCas9 |
negative selection |
7821744 |
89966158 |
89966181 |
14 |
- |
27260156 |
PANC0327 |
viability |
GAAACAAGCGTCCCAAATAAAGG |
TDP1 |
ENSG00000042088 |
-1.03658357748745 |
[174] |
[120,50,68,68] |
-8 |
hSpCas9 |
negative selection |
7821745 |
89971179 |
89971202 |
14 |
+ |
27260156 |
NCIH2009 |
viability |
AAGCCAATCCTGCTTGTGCATGG |
TDP1 |
ENSG00000042088 |
0.8591015447977904 |
[302] |
[832,781,699] |
9 |
hSpCas9 |
negative selection |
7878740 |
89967366 |
89967389 |
14 |
+ |
27260156 |
NCIH2009 |
viability |
GTTTAACTACTGCTTTGACGTGG |
TDP1 |
ENSG00000042088 |
0.2425793214932606 |
[408] |
[726,517,794] |
3 |
hSpCas9 |
negative selection |
7878741 |
89971245 |
89971268 |
14 |
- |
27260156 |
NCIH2009 |
viability |
CAGAGAGAGATGTTCTCGTAAGG |
TDP1 |
ENSG00000042088 |
0.3017305440228221 |
[276] |
[520,476,440] |
4 |
hSpCas9 |
negative selection |
7878742 |
89967401 |
89967424 |
14 |
+ |
27260156 |
NCIH2009 |
viability |
AACAGTATCCACCAGAGTTCAGG |
TDP1 |
ENSG00000042088 |
-0.010924912275108306 |
[485] |
[830,871,344] |
0 |
hSpCas9 |
negative selection |
7942994 |
89966169 |
89966192 |
14 |
+ |
27260156 |
NCIH2009 |
viability |
GACGCTTGTTTCTTCAGCTCAGG |
TDP1 |
ENSG00000042088 |
-0.23333415900533883 |
[158] |
[114,297,136] |
-3 |
hSpCas9 |
negative selection |
7942995 |
89966158 |
89966181 |
14 |
- |
27260156 |
NCIH2009 |
viability |
GAAACAAGCGTCCCAAATAAAGG |
TDP1 |
ENSG00000042088 |
0.162891541208664 |
[174] |
[445,260,147] |
2 |
hSpCas9 |
negative selection |
7942996 |
89971179 |
89971202 |
14 |
+ |
27260156 |
NCIH1373 |
viability |
AAGCCAATCCTGCTTGTGCATGG |
TDP1 |
ENSG00000042088 |
0.791875479098977 |
[302] |
[465,366,573,254] |
7 |
hSpCas9 |
negative selection |
7999991 |
89967366 |
89967389 |
14 |
+ |
27260156 |
NCIH1373 |
viability |
GTTTAACTACTGCTTTGACGTGG |
TDP1 |
ENSG00000042088 |
0.2230414400903234 |
[408] |
[579,242,943,102] |
2 |
hSpCas9 |
negative selection |
7999992 |
89971245 |
89971268 |
14 |
- |
27260156 |
NCIH1373 |
viability |
CAGAGAGAGATGTTCTCGTAAGG |
TDP1 |
ENSG00000042088 |
0.20471829861757984 |
[276] |
[756,177,364,52] |
2 |
hSpCas9 |
negative selection |
7999993 |
89967401 |
89967424 |
14 |
+ |
27260156 |
NCIH1373 |
viability |
AACAGTATCCACCAGAGTTCAGG |
TDP1 |
ENSG00000042088 |
0.29216682790055226 |
[485] |
[357,884,451,240] |
3 |
hSpCas9 |
negative selection |
8064245 |
89966169 |
89966192 |
14 |
+ |
27260156 |
NCIH1373 |
viability |
GACGCTTGTTTCTTCAGCTCAGG |
TDP1 |
ENSG00000042088 |
-0.7111648813105345 |
[158] |
[124,78,111,32] |
-6 |
hSpCas9 |
negative selection |
8064246 |
89966158 |
89966181 |
14 |
- |
27260156 |
NCIH1373 |
viability |
GAAACAAGCGTCCCAAATAAAGG |
TDP1 |
ENSG00000042088 |
0.44433284878851265 |
[174] |
[518,226,226,33] |
4 |
hSpCas9 |
negative selection |
8064247 |
89971179 |
89971202 |
14 |
+ |
27260156 |
PATU8902 |
viability |
AAGCCAATCCTGCTTGTGCATGG |
TDP1 |
ENSG00000042088 |
0.4048743981981474 |
[302] |
[652,719,224,739] |
4 |
hSpCas9 |
negative selection |
8121242 |
89967366 |
89967389 |
14 |
+ |
27260156 |
PATU8902 |
viability |
GTTTAACTACTGCTTTGACGTGG |
TDP1 |
ENSG00000042088 |
0.6341178770339834 |
[408] |
[911,879,536,1344] |
6 |
hSpCas9 |
negative selection |
8121243 |
89971245 |
89971268 |
14 |
- |
27260156 |
PATU8902 |
viability |
CAGAGAGAGATGTTCTCGTAAGG |
TDP1 |
ENSG00000042088 |
0.6852864090606468 |
[276] |
[518,938,489,556] |
7 |
hSpCas9 |
negative selection |
8121244 |
89967401 |
89967424 |
14 |
+ |
27260156 |
PATU8902 |
viability |
AACAGTATCCACCAGAGTTCAGG |
TDP1 |
ENSG00000042088 |
0.2827386924599419 |
[485] |
[788,963,629,972] |
3 |
hSpCas9 |
negative selection |
8185496 |
89966169 |
89966192 |
14 |
+ |
27260156 |
PATU8902 |
viability |
GACGCTTGTTTCTTCAGCTCAGG |
TDP1 |
ENSG00000042088 |
0.48644124907190056 |
[158] |
[332,204,81,726] |
5 |
hSpCas9 |
negative selection |
8185497 |
89966158 |
89966181 |
14 |
- |
27260156 |
PATU8902 |
viability |
GAAACAAGCGTCCCAAATAAAGG |
TDP1 |
ENSG00000042088 |
0.3642489420597228 |
[174] |
[400,199,280,385] |
4 |
hSpCas9 |
negative selection |
8185498 |
89971179 |
89971202 |
14 |
+ |
27260156 |
PANC1 |
viability |
AAGCCAATCCTGCTTGTGCATGG |
TDP1 |
ENSG00000042088 |
0.42495397911800203 |
[302] |
[292,626,353,200] |
7 |
hSpCas9 |
negative selection |
8242493 |
89967366 |
89967389 |
14 |
+ |
27260156 |
PANC1 |
viability |
GTTTAACTACTGCTTTGACGTGG |
TDP1 |
ENSG00000042088 |
-0.22621290996652116 |
[408] |
[319,315,376,202] |
-4 |
hSpCas9 |
negative selection |
8242494 |
89971245 |
89971268 |
14 |
- |
27260156 |
PANC1 |
viability |
CAGAGAGAGATGTTCTCGTAAGG |
TDP1 |
ENSG00000042088 |
0.051141613485874204 |
[276] |
[280,315,219,187] |
0 |
hSpCas9 |
negative selection |
8242495 |
89967401 |
89967424 |
14 |
+ |
27260156 |
PANC1 |
viability |
AACAGTATCCACCAGAGTTCAGG |
TDP1 |
ENSG00000042088 |
-0.26082488646950225 |
[485] |
[330,467,297,319] |
-4 |
hSpCas9 |
negative selection |
8306747 |
89966169 |
89966192 |
14 |
+ |
27260156 |
PANC1 |
viability |
GACGCTTGTTTCTTCAGCTCAGG |
TDP1 |
ENSG00000042088 |
0.21547836861528724 |
[158] |
[165,59,109,257] |
3 |
hSpCas9 |
negative selection |
8306748 |
89966158 |
89966181 |
14 |
- |
27260156 |
PANC1 |
viability |
GAAACAAGCGTCCCAAATAAAGG |
TDP1 |
ENSG00000042088 |
-0.06463294000040065 |
[174] |
[96,168,149,159] |
-1 |
hSpCas9 |
negative selection |
8306749 |
89971179 |
89971202 |
14 |
+ |
27260156 |
PANC0813 |
viability |
AAGCCAATCCTGCTTGTGCATGG |
TDP1 |
ENSG00000042088 |
0.42453694028679523 |
[302] |
[626,480,455,365] |
6 |
hSpCas9 |
negative selection |
8363744 |
89967366 |
89967389 |
14 |
+ |
27260156 |
PANC0813 |
viability |
GTTTAACTACTGCTTTGACGTGG |
TDP1 |
ENSG00000042088 |
0.5071743458896926 |
[408] |
[751,876,540,571] |
7 |
hSpCas9 |
negative selection |
8363745 |
89971245 |
89971268 |
14 |
- |
27260156 |
PANC0813 |
viability |
CAGAGAGAGATGTTCTCGTAAGG |
TDP1 |
ENSG00000042088 |
0.25072791704170794 |
[276] |
[486,345,406,320] |
4 |
hSpCas9 |
negative selection |
8363746 |
89967401 |
89967424 |
14 |
+ |
27260156 |
PANC0813 |
viability |
AACAGTATCCACCAGAGTTCAGG |
TDP1 |
ENSG00000042088 |
0.2840081572219148 |
[485] |
[789,951,552,502] |
4 |
hSpCas9 |
negative selection |
8427998 |
89966169 |
89966192 |
14 |
+ |
27260156 |
PANC0813 |
viability |
GACGCTTGTTTCTTCAGCTCAGG |
TDP1 |
ENSG00000042088 |
-0.5689906994480749 |
[158] |
[97,208,110,84] |
-7 |
hSpCas9 |
negative selection |
8427999 |
89966158 |
89966181 |
14 |
- |
27260156 |
PANC0813 |
viability |
GAAACAAGCGTCCCAAATAAAGG |
TDP1 |
ENSG00000042088 |
-0.36412440511419963 |
[174] |
[182,90,172,191] |
-5 |
hSpCas9 |
negative selection |
8428000 |
89971179 |
89971202 |
14 |
+ |
27260156 |
RDES |
viability |
AAGCCAATCCTGCTTGTGCATGG |
TDP1 |
ENSG00000042088 |
0.4539232262266262 |
[302] |
[325,474,595,546] |
7 |
hSpCas9 |
negative selection |
8484995 |
89967366 |
89967389 |
14 |
+ |
27260156 |
RDES |
viability |
GTTTAACTACTGCTTTGACGTGG |
TDP1 |
ENSG00000042088 |
0.2322569186000828 |
[408] |
[438,572,636,572] |
4 |
hSpCas9 |
negative selection |
8484996 |
89971245 |
89971268 |
14 |
- |
27260156 |
RDES |
viability |
CAGAGAGAGATGTTCTCGTAAGG |
TDP1 |
ENSG00000042088 |
0.177933746479793 |
[276] |
[340,383,340,364] |
3 |
hSpCas9 |
negative selection |
8484997 |
89967401 |
89967424 |
14 |
+ |
27260156 |
RDES |
viability |
AACAGTATCCACCAGAGTTCAGG |
TDP1 |
ENSG00000042088 |
-0.04465464544366805 |
[485] |
[342,593,624,647] |
0 |
hSpCas9 |
negative selection |
8549249 |
89966169 |
89966192 |
14 |
+ |
27260156 |
RDES |
viability |
GACGCTTGTTTCTTCAGCTCAGG |
TDP1 |
ENSG00000042088 |
0.648123950892059 |
[158] |
[259,205,279,425] |
9 |
hSpCas9 |
negative selection |
8549250 |
89966158 |
89966181 |
14 |
- |
27260156 |
RDES |
viability |
GAAACAAGCGTCCCAAATAAAGG |
TDP1 |
ENSG00000042088 |
0.32827241046748523 |
[174] |
[114,254,371,304] |
5 |
hSpCas9 |
negative selection |
8549251 |
89971179 |
89971202 |
14 |
+ |
27260156 |
PC3 |
viability |
AAGCCAATCCTGCTTGTGCATGG |
TDP1 |
ENSG00000042088 |
-0.06908495985497931 |
[302] |
[140,285,422,400] |
-1 |
hSpCas9 |
negative selection |
8606246 |
89967366 |
89967389 |
14 |
+ |
27260156 |
PC3 |
viability |
GTTTAACTACTGCTTTGACGTGG |
TDP1 |
ENSG00000042088 |
0.2427689811734788 |
[408] |
[309,417,878,509] |
5 |
hSpCas9 |
negative selection |
8606247 |
89971245 |
89971268 |
14 |
- |
27260156 |
PC3 |
viability |
CAGAGAGAGATGTTCTCGTAAGG |
TDP1 |
ENSG00000042088 |
0.32110934900653404 |
[276] |
[225,384,443,378] |
7 |
hSpCas9 |
negative selection |
8606248 |
89967401 |
89967424 |
14 |
+ |
27260156 |
PC3 |
viability |
AACAGTATCCACCAGAGTTCAGG |
TDP1 |
ENSG00000042088 |
0.001230219026275653 |
[485] |
[232,611,723,529] |
0 |
hSpCas9 |
negative selection |
8670500 |
89966169 |
89966192 |
14 |
+ |
27260156 |
PC3 |
viability |
GACGCTTGTTTCTTCAGCTCAGG |
TDP1 |
ENSG00000042088 |
-0.19915586667735896 |
[158] |
[133,120,151,132] |
-4 |
hSpCas9 |
negative selection |
8670501 |
89966158 |
89966181 |
14 |
- |
27260156 |
PC3 |
viability |
GAAACAAGCGTCCCAAATAAAGG |
TDP1 |
ENSG00000042088 |
0.1805897725720811 |
[174] |
[101,253,248,228] |
4 |
hSpCas9 |
negative selection |
8670502 |
89971179 |
89971202 |
14 |
+ |
27260156 |
PATU8988T |
viability |
AAGCCAATCCTGCTTGTGCATGG |
TDP1 |
ENSG00000042088 |
0.28354306385491507 |
[302] |
[354,340,300,433] |
5 |
hSpCas9 |
negative selection |
8727497 |
89967366 |
89967389 |
14 |
+ |
27260156 |
PATU8988T |
viability |
GTTTAACTACTGCTTTGACGTGG |
TDP1 |
ENSG00000042088 |
-0.007874833496284983 |
[408] |
[424,250,366,526] |
0 |
hSpCas9 |
negative selection |
8727498 |
89971245 |
89971268 |
14 |
- |
27260156 |
PATU8988T |
viability |
CAGAGAGAGATGTTCTCGTAAGG |
TDP1 |
ENSG00000042088 |
0.2986771025653978 |
[276] |
[156,331,474,352] |
5 |
hSpCas9 |
negative selection |
8727499 |
89967401 |
89967424 |
14 |
+ |
27260156 |
PATU8988T |
viability |
AACAGTATCCACCAGAGTTCAGG |
TDP1 |
ENSG00000042088 |
-0.42235791234639897 |
[485] |
[343,521,249,298] |
-6 |
hSpCas9 |
negative selection |
8791751 |
89966169 |
89966192 |
14 |
+ |
27260156 |
PATU8988T |
viability |
GACGCTTGTTTCTTCAGCTCAGG |
TDP1 |
ENSG00000042088 |
0.8798500599038596 |
[158] |
[178,301,391,255] |
9 |
hSpCas9 |
negative selection |
8791752 |
89966158 |
89966181 |
14 |
- |
27260156 |
PATU8988T |
viability |
GAAACAAGCGTCCCAAATAAAGG |
TDP1 |
ENSG00000042088 |
0.565501379812558 |
[174] |
[285,538,113,76] |
8 |
hSpCas9 |
negative selection |
8791753 |
89971179 |
89971202 |
14 |
+ |
27260156 |
T47D |
viability |
AAGCCAATCCTGCTTGTGCATGG |
TDP1 |
ENSG00000042088 |
0.20573484893480848 |
[302] |
[421,362,492,350] |
4 |
hSpCas9 |
negative selection |
8848748 |
89967366 |
89967389 |
14 |
+ |
27260156 |
T47D |
viability |
GTTTAACTACTGCTTTGACGTGG |
TDP1 |
ENSG00000042088 |
-0.04491380118053204 |
[408] |
[534,508,348,451] |
-1 |
hSpCas9 |
negative selection |
8848749 |
89971245 |
89971268 |
14 |
- |
27260156 |
T47D |
viability |
CAGAGAGAGATGTTCTCGTAAGG |
TDP1 |
ENSG00000042088 |
0.24407573114709902 |
[276] |
[337,371,404,414] |
5 |
hSpCas9 |
negative selection |
8848750 |
89967401 |
89967424 |
14 |
+ |
27260156 |
T47D |
viability |
AACAGTATCCACCAGAGTTCAGG |
TDP1 |
ENSG00000042088 |
-0.11502554786354562 |
[485] |
[570,535,420,564] |
-3 |
hSpCas9 |
negative selection |
8913002 |
89966169 |
89966192 |
14 |
+ |
27260156 |
T47D |
viability |
GACGCTTGTTTCTTCAGCTCAGG |
TDP1 |
ENSG00000042088 |
0.31103541234388876 |
[158] |
[265,141,267,250] |
6 |
hSpCas9 |
negative selection |
8913003 |
89966158 |
89966181 |
14 |
- |
27260156 |
T47D |
viability |
GAAACAAGCGTCCCAAATAAAGG |
TDP1 |
ENSG00000042088 |
0.1949010740348165 |
[174] |
[227,247,186,270] |
4 |
hSpCas9 |
negative selection |
8913004 |
89971179 |
89971202 |
14 |
+ |
27260156 |
SU8686 |
viability |
AAGCCAATCCTGCTTGTGCATGG |
TDP1 |
ENSG00000042088 |
0.5007530123564137 |
[302] |
[374,360,327,686] |
8 |
hSpCas9 |
negative selection |
8969999 |
89967366 |
89967389 |
14 |
+ |
27260156 |
SU8686 |
viability |
GTTTAACTACTGCTTTGACGTGG |
TDP1 |
ENSG00000042088 |
0.234652575128453 |
[408] |
[428,412,467,633] |
4 |
hSpCas9 |
negative selection |
8970000 |
89971245 |
89971268 |
14 |
- |
27260156 |
SU8686 |
viability |
CAGAGAGAGATGTTCTCGTAAGG |
TDP1 |
ENSG00000042088 |
0.044774677659777384 |
[276] |
[218,255,347,327] |
0 |
hSpCas9 |
negative selection |
8970001 |
89967401 |
89967424 |
14 |
+ |
27260156 |
SU8686 |
viability |
AACAGTATCCACCAGAGTTCAGG |
TDP1 |
ENSG00000042088 |
0.069778092796506 |
[485] |
[463,393,562,640] |
1 |
hSpCas9 |
negative selection |
9034253 |
89966169 |
89966192 |
14 |
+ |
27260156 |
SU8686 |
viability |
GACGCTTGTTTCTTCAGCTCAGG |
TDP1 |
ENSG00000042088 |
0.302111877823823 |
[158] |
[120,150,244,289] |
5 |
hSpCas9 |
negative selection |
9034254 |
89966158 |
89966181 |
14 |
- |
27260156 |
SU8686 |
viability |
GAAACAAGCGTCCCAAATAAAGG |
TDP1 |
ENSG00000042088 |
-0.9906580270039644 |
[174] |
[79,71,63,143] |
-8 |
hSpCas9 |
negative selection |
9034255 |
89971179 |
89971202 |
14 |
+ |
27260156 |
SKES1 |
viability |
AAGCCAATCCTGCTTGTGCATGG |
TDP1 |
ENSG00000042088 |
0.43701135662210056 |
[302] |
[249,595,271,504] |
8 |
hSpCas9 |
negative selection |
9091250 |
89967366 |
89967389 |
14 |
+ |
27260156 |
SKES1 |
viability |
GTTTAACTACTGCTTTGACGTGG |
TDP1 |
ENSG00000042088 |
0.20791795719442155 |
[408] |
[539,511,489,364] |
4 |
hSpCas9 |
negative selection |
9091251 |
89971245 |
89971268 |
14 |
- |
27260156 |
SKES1 |
viability |
CAGAGAGAGATGTTCTCGTAAGG |
TDP1 |
ENSG00000042088 |
0.20291022039738338 |
[276] |
[171,385,401,297] |
4 |
hSpCas9 |
negative selection |
9091252 |
89967401 |
89967424 |
14 |
+ |
27260156 |
SKES1 |
viability |
AACAGTATCCACCAGAGTTCAGG |
TDP1 |
ENSG00000042088 |
0.0353453559585664 |
[485] |
[516,478,554,437] |
0 |
hSpCas9 |
negative selection |
9155504 |
89966169 |
89966192 |
14 |
+ |
27260156 |
SKES1 |
viability |
GACGCTTGTTTCTTCAGCTCAGG |
TDP1 |
ENSG00000042088 |
0.43199994749635473 |
[158] |
[175,306,191,187] |
8 |
hSpCas9 |
negative selection |
9155505 |
89966158 |
89966181 |
14 |
- |
27260156 |
SKES1 |
viability |
GAAACAAGCGTCCCAAATAAAGG |
TDP1 |
ENSG00000042088 |
0.3698807511723714 |
[174] |
[225,236,248,192] |
7 |
hSpCas9 |
negative selection |
9155506 |
89971179 |
89971202 |
14 |
+ |
27260156 |
TOV112D |
viability |
AAGCCAATCCTGCTTGTGCATGG |
TDP1 |
ENSG00000042088 |
-0.021508733273523317 |
[302] |
[189,354,209,440] |
0 |
hSpCas9 |
negative selection |
9212501 |
89967366 |
89967389 |
14 |
+ |
27260156 |
TOV112D |
viability |
GTTTAACTACTGCTTTGACGTGG |
TDP1 |
ENSG00000042088 |
-0.4261991448897183 |
[408] |
[410,331,311,182] |
-7 |
hSpCas9 |
negative selection |
9212502 |
89971245 |
89971268 |
14 |
- |
27260156 |
TOV112D |
viability |
CAGAGAGAGATGTTCTCGTAAGG |
TDP1 |
ENSG00000042088 |
0.23127523049472354 |
[276] |
[389,578,187,215] |
4 |
hSpCas9 |
negative selection |
9212503 |
89967401 |
89967424 |
14 |
+ |
27260156 |
TOV112D |
viability |
AACAGTATCCACCAGAGTTCAGG |
TDP1 |
ENSG00000042088 |
-0.2706019414712546 |
[485] |
[382,628,355,301] |
-5 |
hSpCas9 |
negative selection |
9276755 |
89966169 |
89966192 |
14 |
+ |
27260156 |
TOV112D |
viability |
GACGCTTGTTTCTTCAGCTCAGG |
TDP1 |
ENSG00000042088 |
-0.023536811755252796 |
[158] |
[111,175,203,135] |
0 |
hSpCas9 |
negative selection |
9276756 |
89966158 |
89966181 |
14 |
- |
27260156 |
TOV112D |
viability |
GAAACAAGCGTCCCAAATAAAGG |
TDP1 |
ENSG00000042088 |
0.09396088756583487 |
[174] |
[131,272,82,273] |
1 |
hSpCas9 |
negative selection |
9276757 |
89971179 |
89971202 |
14 |
+ |
27260156 |
TC71 |
viability |
AAGCCAATCCTGCTTGTGCATGG |
TDP1 |
ENSG00000042088 |
0.16951278165580969 |
[302] |
[253,427,374,408] |
4 |
hSpCas9 |
negative selection |
9333752 |
89967366 |
89967389 |
14 |
+ |
27260156 |
TC71 |
viability |
GTTTAACTACTGCTTTGACGTGG |
TDP1 |
ENSG00000042088 |
0.1487925549268321 |
[408] |
[458,469,402,623] |
4 |
hSpCas9 |
negative selection |
9333753 |
89971245 |
89971268 |
14 |
- |
27260156 |
TC71 |
viability |
CAGAGAGAGATGTTCTCGTAAGG |
TDP1 |
ENSG00000042088 |
0.32219623942698405 |
[276] |
[372,299,394,418] |
7 |
hSpCas9 |
negative selection |
9333754 |
89967401 |
89967424 |
14 |
+ |
27260156 |
TC71 |
viability |
AACAGTATCCACCAGAGTTCAGG |
TDP1 |
ENSG00000042088 |
-0.08687437428320205 |
[485] |
[453,498,467,545] |
-2 |
hSpCas9 |
negative selection |
9398006 |
89966169 |
89966192 |
14 |
+ |
27260156 |
TC71 |
viability |
GACGCTTGTTTCTTCAGCTCAGG |
TDP1 |
ENSG00000042088 |
-0.06618427560910334 |
[158] |
[104,142,188,217] |
-2 |
hSpCas9 |
negative selection |
9398007 |
89966158 |
89966181 |
14 |
- |
27260156 |
TC71 |
viability |
GAAACAAGCGTCCCAAATAAAGG |
TDP1 |
ENSG00000042088 |
0.20253284808338612 |
[174] |
[269,117,205,271] |
5 |
hSpCas9 |
negative selection |
9398008 |
89971179 |
89971202 |
14 |
+ |
27260156 |
TC32 |
viability |
AAGCCAATCCTGCTTGTGCATGG |
TDP1 |
ENSG00000042088 |
0.1270942553033645 |
[302] |
[242,297,412,300] |
2 |
hSpCas9 |
negative selection |
9455003 |
89967366 |
89967389 |
14 |
+ |
27260156 |
TC32 |
viability |
GTTTAACTACTGCTTTGACGTGG |
TDP1 |
ENSG00000042088 |
-0.18482221682958755 |
[408] |
[417,239,340,360] |
-3 |
hSpCas9 |
negative selection |
9455004 |
89971245 |
89971268 |
14 |
- |
27260156 |
TC32 |
viability |
CAGAGAGAGATGTTCTCGTAAGG |
TDP1 |
ENSG00000042088 |
0.10194243543817105 |
[276] |
[305,299,215,251] |
1 |
hSpCas9 |
negative selection |
9455005 |
89967401 |
89967424 |
14 |
+ |
27260156 |
TC32 |
viability |
AACAGTATCCACCAGAGTTCAGG |
TDP1 |
ENSG00000042088 |
0.06734856770945122 |
[485] |
[373,539,510,450] |
1 |
hSpCas9 |
negative selection |
9519257 |
89966169 |
89966192 |
14 |
+ |
27260156 |
TC32 |
viability |
GACGCTTGTTTCTTCAGCTCAGG |
TDP1 |
ENSG00000042088 |
0.2545348038029198 |
[158] |
[179,144,192,199] |
4 |
hSpCas9 |
negative selection |
9519258 |
89966158 |
89966181 |
14 |
- |
27260156 |
TC32 |
viability |
GAAACAAGCGTCCCAAATAAAGG |
TDP1 |
ENSG00000042088 |
0.3298078229537176 |
[174] |
[275,107,312,161] |
6 |
hSpCas9 |
negative selection |
9519259 |
89963122 |
89963145 |
14 |
+ |
27869803 |
HPAFII |
viability after 27 days |
AGGAAGGCGATTATGGGAGGTGG |
TDP1 |
ENSG00000042088 |
0.3249159519210883 |
[204] |
[146,124,NaN] |
2 |
hSpCas9 |
negative selection |
9552681 |
89967371 |
89967394 |
14 |
+ |
27869803 |
HPAFII |
viability after 27 days |
ACTACTGCTTTGACGTGGACTGG |
TDP1 |
ENSG00000042088 |
1.4260847761718622 |
[86] |
[219,41,NaN] |
9 |
hSpCas9 |
negative selection |
9552682 |
89971229 |
89971252 |
14 |
- |
27869803 |
HPAFII |
viability after 27 days |
CGTAAGGCTTGGCCTGGGCATGG |
TDP1 |
ENSG00000042088 |
0.7263395882231699 |
[316] |
[272,277,NaN] |
6 |
hSpCas9 |
negative selection |
9552683 |
89980573 |
89980596 |
14 |
- |
27869803 |
HPAFII |
viability after 27 days |
TGGAGGTGTGTATGACAACCCGG |
TDP1 |
ENSG00000042088 |
0.6363565473208986 |
[466] |
[547,242,NaN] |
5 |
hSpCas9 |
negative selection |
9552684 |
89984627 |
89984650 |
14 |
- |
27869803 |
HPAFII |
viability after 27 days |
CTATCCACTCCTTGAGAGAAGGG |
TDP1 |
ENSG00000042088 |
0.5985548078956874 |
[476] |
[532,251,NaN] |
5 |
hSpCas9 |
negative selection |
9552685 |
89988916 |
89988939 |
14 |
- |
27869803 |
HPAFII |
viability after 27 days |
CGTTAGGCATGGATGAGGCATGG |
TDP1 |
ENSG00000042088 |
1.1092150116719206 |
[558] |
[861,443,NaN] |
8 |
hSpCas9 |
negative selection |
9552686 |
89963122 |
89963145 |
14 |
+ |
27869803 |
HPAFII |
viability after 15 days |
AGGAAGGCGATTATGGGAGGTGG |
TDP1 |
ENSG00000042088 |
-0.11102904128811869 |
[204] |
[203,203,NaN] |
-1 |
hSpCas9 |
negative selection |
9635130 |
89967371 |
89967394 |
14 |
+ |
27869803 |
HPAFII |
viability after 15 days |
ACTACTGCTTTGACGTGGACTGG |
TDP1 |
ENSG00000042088 |
0.8433195516699995 |
[86] |
[250,115,NaN] |
8 |
hSpCas9 |
negative selection |
9635131 |
89971229 |
89971252 |
14 |
- |
27869803 |
HPAFII |
viability after 15 days |
CGTAAGGCTTGGCCTGGGCATGG |
TDP1 |
ENSG00000042088 |
0.5169189516227579 |
[316] |
[394,544,NaN] |
6 |
hSpCas9 |
negative selection |
9635132 |
89980573 |
89980596 |
14 |
- |
27869803 |
HPAFII |
viability after 15 days |
TGGAGGTGTGTATGACAACCCGG |
TDP1 |
ENSG00000042088 |
0.24405271977675247 |
[466] |
[1009,335,NaN] |
3 |
hSpCas9 |
negative selection |
9635133 |
89984627 |
89984650 |
14 |
- |
27869803 |
HPAFII |
viability after 15 days |
CTATCCACTCCTTGAGAGAAGGG |
TDP1 |
ENSG00000042088 |
0.046320495719657795 |
[476] |
[767,380,NaN] |
0 |
hSpCas9 |
negative selection |
9635134 |
89988916 |
89988939 |
14 |
- |
27869803 |
HPAFII |
viability after 15 days |
CGTTAGGCATGGATGAGGCATGG |
TDP1 |
ENSG00000042088 |
0.5708468102412527 |
[558] |
[1278,651,NaN] |
6 |
hSpCas9 |
negative selection |
9635135 |
89963122 |
89963145 |
14 |
+ |
27869803 |
ASPC1 |
viability after 36 days |
AGGAAGGCGATTATGGGAGGTGG |
TDP1 |
ENSG00000042088 |
0.42032676629458066 |
[603] |
[155,442,239] |
4 |
hSpCas9 |
negative selection |
9717579 |
89967371 |
89967394 |
14 |
+ |
27869803 |
ASPC1 |
viability after 36 days |
ACTACTGCTTTGACGTGGACTGG |
TDP1 |
ENSG00000042088 |
1.346037750262513 |
[327] |
[595,139,193] |
9 |
hSpCas9 |
negative selection |
9717580 |
89971229 |
89971252 |
14 |
- |
27869803 |
ASPC1 |
viability after 36 days |
CGTAAGGCTTGGCCTGGGCATGG |
TDP1 |
ENSG00000042088 |
0.18396741334204814 |
[1029] |
[334,402,459] |
1 |
hSpCas9 |
negative selection |
9717581 |
89980573 |
89980596 |
14 |
- |
27869803 |
ASPC1 |
viability after 36 days |
TGGAGGTGTGTATGACAACCCGG |
TDP1 |
ENSG00000042088 |
0.46406531751177404 |
[1017] |
[535,547,406] |
4 |
hSpCas9 |
negative selection |
9717582 |
89984627 |
89984650 |
14 |
- |
27869803 |
ASPC1 |
viability after 36 days |
CTATCCACTCCTTGAGAGAAGGG |
TDP1 |
ENSG00000042088 |
0.8401097325722168 |
[946] |
[457,517,737] |
7 |
hSpCas9 |
negative selection |
9717583 |
89988916 |
89988939 |
14 |
- |
27869803 |
ASPC1 |
viability after 36 days |
CGTTAGGCATGGATGAGGCATGG |
TDP1 |
ENSG00000042088 |
0.7557219320273851 |
[1346] |
[954,611,816] |
7 |
hSpCas9 |
negative selection |
9717584 |
89963122 |
89963145 |
14 |
+ |
27869803 |
PATU8988S |
viability after 35 days |
AGGAAGGCGATTATGGGAGGTGG |
TDP1 |
ENSG00000042088 |
0.2466424250192898 |
[573] |
[177,370,NaN] |
3 |
hSpCas9 |
negative selection |
9800028 |
89967371 |
89967394 |
14 |
+ |
27869803 |
PATU8988S |
viability after 35 days |
ACTACTGCTTTGACGTGGACTGG |
TDP1 |
ENSG00000042088 |
0.10763375432847816 |
[361] |
[195,117,NaN] |
1 |
hSpCas9 |
negative selection |
9800029 |
89971229 |
89971252 |
14 |
- |
27869803 |
PATU8988S |
viability after 35 days |
CGTAAGGCTTGGCCTGGGCATGG |
TDP1 |
ENSG00000042088 |
-0.23218243515522774 |
[907] |
[238,383,NaN] |
-2 |
hSpCas9 |
negative selection |
9800030 |
89980573 |
89980596 |
14 |
- |
27869803 |
PATU8988S |
viability after 35 days |
TGGAGGTGTGTATGACAACCCGG |
TDP1 |
ENSG00000042088 |
0.6492505828495797 |
[964] |
[629,588,NaN] |
7 |
hSpCas9 |
negative selection |
9800031 |
89984627 |
89984650 |
14 |
- |
27869803 |
PATU8988S |
viability after 35 days |
CTATCCACTCCTTGAGAGAAGGG |
TDP1 |
ENSG00000042088 |
-0.10695371827388833 |
[833] |
[264,358,NaN] |
-1 |
hSpCas9 |
negative selection |
9800032 |
89988916 |
89988939 |
14 |
- |
27869803 |
PATU8988S |
viability after 35 days |
CGTTAGGCATGGATGAGGCATGG |
TDP1 |
ENSG00000042088 |
1.1706801368922992 |
[967] |
[1161,591,NaN] |
9 |
hSpCas9 |
negative selection |
9800033 |
89963122 |
89963145 |
14 |
+ |
27869803 |
PATU8988S |
viability after 31 days |
AGGAAGGCGATTATGGGAGGTGG |
TDP1 |
ENSG00000042088 |
-0.011992132172486125 |
[573] |
[149,324,NaN] |
0 |
hSpCas9 |
negative selection |
9882477 |
89967371 |
89967394 |
14 |
+ |
27869803 |
PATU8988S |
viability after 31 days |
ACTACTGCTTTGACGTGGACTGG |
TDP1 |
ENSG00000042088 |
-0.1765257531805693 |
[361] |
[132,120,NaN] |
-2 |
hSpCas9 |
negative selection |
9882478 |
89971229 |
89971252 |
14 |
- |
27869803 |
PATU8988S |
viability after 31 days |
CGTAAGGCTTGGCCTGGGCATGG |
TDP1 |
ENSG00000042088 |
0.08705199645780504 |
[907] |
[278,518,NaN] |
1 |
hSpCas9 |
negative selection |
9882479 |
89980573 |
89980596 |
14 |
- |
27869803 |
PATU8988S |
viability after 31 days |
TGGAGGTGTGTATGACAACCCGG |
TDP1 |
ENSG00000042088 |
0.6852380312838228 |
[964] |
[645,583,NaN] |
7 |
hSpCas9 |
negative selection |
9882480 |
89984627 |
89984650 |
14 |
- |
27869803 |
PATU8988S |
viability after 31 days |
CTATCCACTCCTTGAGAGAAGGG |
TDP1 |
ENSG00000042088 |
0.0805818870863626 |
[833] |
[231,503,NaN] |
1 |
hSpCas9 |
negative selection |
9882481 |
89988916 |
89988939 |
14 |
- |
27869803 |
PATU8988S |
viability after 31 days |
CGTTAGGCATGGATGAGGCATGG |
TDP1 |
ENSG00000042088 |
1.045805883335925 |
[967] |
[751,853,NaN] |
9 |
hSpCas9 |
negative selection |
9882482 |
89963122 |
89963145 |
14 |
+ |
27869803 |
HPAFII |
viability after 35 days |
AGGAAGGCGATTATGGGAGGTGG |
TDP1 |
ENSG00000042088 |
0.6475183301846634 |
[204] |
[123,205,NaN] |
4 |
hSpCas9 |
negative selection |
9964926 |
89967371 |
89967394 |
14 |
+ |
27869803 |
HPAFII |
viability after 35 days |
ACTACTGCTTTGACGTGGACTGG |
TDP1 |
ENSG00000042088 |
2.6980191346544027 |
[86] |
[480,65,NaN] |
9 |
hSpCas9 |
negative selection |
9964927 |
89971229 |
89971252 |
14 |
- |
27869803 |
HPAFII |
viability after 35 days |
CGTAAGGCTTGGCCTGGGCATGG |
TDP1 |
ENSG00000042088 |
0.17501242562423136 |
[316] |
[64,311,NaN] |
1 |
hSpCas9 |
negative selection |
9964928 |
89980573 |
89980596 |
14 |
- |
27869803 |
HPAFII |
viability after 35 days |
TGGAGGTGTGTATGACAACCCGG |
TDP1 |
ENSG00000042088 |
0.7537107124067634 |
[466] |
[479,306,NaN] |
5 |
hSpCas9 |
negative selection |
9964929 |
89984627 |
89984650 |
14 |
- |
27869803 |
HPAFII |
viability after 35 days |
CTATCCACTCCTTGAGAGAAGGG |
TDP1 |
ENSG00000042088 |
0.22587572135302325 |
[476] |
[391,158,NaN] |
1 |
hSpCas9 |
negative selection |
9964930 |
89988916 |
89988939 |
14 |
- |
27869803 |
HPAFII |
viability after 35 days |
CGTTAGGCATGGATGAGGCATGG |
TDP1 |
ENSG00000042088 |
1.6496265537617503 |
[558] |
[1147,594,NaN] |
9 |
hSpCas9 |
negative selection |
9964931 |
89963122 |
89963145 |
14 |
+ |
27869803 |
HPAFII |
viability after 31 days |
AGGAAGGCGATTATGGGAGGTGG |
TDP1 |
ENSG00000042088 |
0.817296718431276 |
[204] |
[218,184,NaN] |
6 |
hSpCas9 |
negative selection |
10047375 |
89967371 |
89967394 |
14 |
+ |
27869803 |
HPAFII |
viability after 31 days |
ACTACTGCTTTGACGTGGACTGG |
TDP1 |
ENSG00000042088 |
2.5081079063211997 |
[86] |
[450,88,NaN] |
9 |
hSpCas9 |
negative selection |
10047376 |
89971229 |
89971252 |
14 |
- |
27869803 |
HPAFII |
viability after 31 days |
CGTAAGGCTTGGCCTGGGCATGG |
TDP1 |
ENSG00000042088 |
0.311721870477632 |
[316] |
[104,346,NaN] |
2 |
hSpCas9 |
negative selection |
10047377 |
89980573 |
89980596 |
14 |
- |
27869803 |
HPAFII |
viability after 31 days |
TGGAGGTGTGTATGACAACCCGG |
TDP1 |
ENSG00000042088 |
0.5889287080996876 |
[466] |
[398,388,NaN] |
4 |
hSpCas9 |
negative selection |
10047378 |
89984627 |
89984650 |
14 |
- |
27869803 |
HPAFII |
viability after 31 days |
CTATCCACTCCTTGAGAGAAGGG |
TDP1 |
ENSG00000042088 |
0.22755150983215444 |
[476] |
[378,241,NaN] |
1 |
hSpCas9 |
negative selection |
10047379 |
89988916 |
89988939 |
14 |
- |
27869803 |
HPAFII |
viability after 31 days |
CGTTAGGCATGGATGAGGCATGG |
TDP1 |
ENSG00000042088 |
1.1976464993863782 |
[558] |
[921,498,NaN] |
8 |
hSpCas9 |
negative selection |
10047380 |
89963227 |
89963250 |
14 |
+ |
28162770 |
P31FUJ |
viability |
AAGGAGCAGCAAATGAGCCCAGG |
TDP1 |
ENSG00000042088 |
-1.0807991109693287 |
[116] |
[64] |
-6 |
hSpCas9 |
negative selection |
10248836 |
89980610 |
89980633 |
14 |
+ |
28162770 |
P31FUJ |
viability |
GACTGGCACCAGAAAACTCAAGG |
TDP1 |
ENSG00000042088 |
0.2784506101237685 |
[86] |
[123] |
3 |
hSpCas9 |
negative selection |
10248837 |
89963543 |
89963566 |
14 |
+ |
28162770 |
P31FUJ |
viability |
CGAGTATGAGACATCAGGGGAGG |
TDP1 |
ENSG00000042088 |
0.5146557635694698 |
[136] |
[229] |
6 |
hSpCas9 |
negative selection |
10248838 |
89980570 |
89980593 |
14 |
- |
28162770 |
P31FUJ |
viability |
AGGTGTGTATGACAACCCGGAGG |
TDP1 |
ENSG00000042088 |
1.021439082961409 |
[95] |
[228] |
9 |
hSpCas9 |
negative selection |
10248839 |
89989027 |
89989050 |
14 |
+ |
28162770 |
P31FUJ |
viability |
GAGCATGCTGACACTGGGGAAGG |
TDP1 |
ENSG00000042088 |
0.7587855557694212 |
[171] |
[341] |
8 |
hSpCas9 |
negative selection |
10248840 |
89993400 |
89993423 |
14 |
- |
28162770 |
P31FUJ |
viability |
TATGTGGCATGGCATTGCTGCGG |
TDP1 |
ENSG00000042088 |
-0.05047218208128576 |
[192] |
[218] |
0 |
hSpCas9 |
negative selection |
10248841 |
90019376 |
90019399 |
14 |
- |
28162770 |
P31FUJ |
viability |
GGACCCCGAGCTCGTAGGAGCGG |
TDP1 |
ENSG00000042088 |
0.7306719195605071 |
[119] |
[233] |
8 |
hSpCas9 |
negative selection |
10248842 |
89963342 |
89963365 |
14 |
+ |
28162770 |
P31FUJ |
viability |
GCAGAAAAGCGGTTCCCAGGAGG |
TDP1 |
ENSG00000042088 |
0.485784860436973 |
[315] |
[519] |
5 |
hSpCas9 |
negative selection |
10248843 |
89963663 |
89963686 |
14 |
- |
28162770 |
P31FUJ |
viability |
GCATCCTCTTACCCTTGATGTGG |
TDP1 |
ENSG00000042088 |
-0.1393233045564417 |
[731] |
[780] |
-1 |
hSpCas9 |
negative selection |
10248844 |
89980597 |
89980620 |
14 |
- |
28162770 |
P31FUJ |
viability |
GGTGCCAGTCAGCATGGATGAGG |
TDP1 |
ENSG00000042088 |
0.9845546270247709 |
[122] |
[285] |
9 |
hSpCas9 |
negative selection |
10248845 |
89963227 |
89963250 |
14 |
+ |
28162770 |
TF1 |
viability |
AAGGAGCAGCAAATGAGCCCAGG |
TDP1 |
ENSG00000042088 |
NaN |
[NaN] |
[28] |
1 |
hSpCas9 |
negative selection |
10418202 |
89980610 |
89980633 |
14 |
+ |
28162770 |
TF1 |
viability |
GACTGGCACCAGAAAACTCAAGG |
TDP1 |
ENSG00000042088 |
NaN |
[NaN] |
[116] |
1 |
hSpCas9 |
negative selection |
10418203 |
89963543 |
89963566 |
14 |
+ |
28162770 |
TF1 |
viability |
CGAGTATGAGACATCAGGGGAGG |
TDP1 |
ENSG00000042088 |
NaN |
[NaN] |
[140] |
1 |
hSpCas9 |
negative selection |
10418204 |
89980570 |
89980593 |
14 |
- |
28162770 |
TF1 |
viability |
AGGTGTGTATGACAACCCGGAGG |
TDP1 |
ENSG00000042088 |
NaN |
[NaN] |
[2] |
1 |
hSpCas9 |
negative selection |
10418205 |
89989027 |
89989050 |
14 |
+ |
28162770 |
TF1 |
viability |
GAGCATGCTGACACTGGGGAAGG |
TDP1 |
ENSG00000042088 |
NaN |
[NaN] |
[202] |
1 |
hSpCas9 |
negative selection |
10418206 |
89993400 |
89993423 |
14 |
- |
28162770 |
TF1 |
viability |
TATGTGGCATGGCATTGCTGCGG |
TDP1 |
ENSG00000042088 |
NaN |
[NaN] |
[89] |
1 |
hSpCas9 |
negative selection |
10418207 |
90019376 |
90019399 |
14 |
- |
28162770 |
TF1 |
viability |
GGACCCCGAGCTCGTAGGAGCGG |
TDP1 |
ENSG00000042088 |
NaN |
[NaN] |
[109] |
1 |
hSpCas9 |
negative selection |
10418208 |
89963342 |
89963365 |
14 |
+ |
28162770 |
TF1 |
viability |
GCAGAAAAGCGGTTCCCAGGAGG |
TDP1 |
ENSG00000042088 |
NaN |
[NaN] |
[273] |
1 |
hSpCas9 |
negative selection |
10418209 |
89963663 |
89963686 |
14 |
- |
28162770 |
TF1 |
viability |
GCATCCTCTTACCCTTGATGTGG |
TDP1 |
ENSG00000042088 |
NaN |
[NaN] |
[483] |
1 |
hSpCas9 |
negative selection |
10418210 |
89980597 |
89980620 |
14 |
- |
28162770 |
TF1 |
viability |
GGTGCCAGTCAGCATGGATGAGG |
TDP1 |
ENSG00000042088 |
NaN |
[NaN] |
[97] |
1 |
hSpCas9 |
negative selection |
10418211 |
89963227 |
89963250 |
14 |
+ |
28162770 |
SKM1 |
viability |
AAGGAGCAGCAAATGAGCCCAGG |
TDP1 |
ENSG00000042088 |
-0.48096478018693867 |
[29] |
[37] |
-4 |
hSpCas9 |
negative selection |
10587568 |
89980610 |
89980633 |
14 |
+ |
28162770 |
SKM1 |
viability |
GACTGGCACCAGAAAACTCAAGG |
TDP1 |
ENSG00000042088 |
0.3530850085360857 |
[30] |
[69] |
3 |
hSpCas9 |
negative selection |
10587569 |
89963543 |
89963566 |
14 |
+ |
28162770 |
SKM1 |
viability |
CGAGTATGAGACATCAGGGGAGG |
TDP1 |
ENSG00000042088 |
-0.5957258421983294 |
[52] |
[61] |
-5 |
hSpCas9 |
negative selection |
10587570 |
89980570 |
89980593 |
14 |
- |
28162770 |
SKM1 |
viability |
AGGTGTGTATGACAACCCGGAGG |
TDP1 |
ENSG00000042088 |
-0.2914869813232256 |
[35] |
[51] |
-2 |
hSpCas9 |
negative selection |
10587571 |
89989027 |
89989050 |
14 |
+ |
28162770 |
SKM1 |
viability |
GAGCATGCTGACACTGGGGAAGG |
TDP1 |
ENSG00000042088 |
0.44103270781178844 |
[59] |
[143] |
4 |
hSpCas9 |
negative selection |
10587572 |
89993400 |
89993423 |
14 |
- |
28162770 |
SKM1 |
viability |
TATGTGGCATGGCATTGCTGCGG |
TDP1 |
ENSG00000042088 |
0.3808151849776816 |
[52] |
[121] |
3 |
hSpCas9 |
negative selection |
10587573 |
90019376 |
90019399 |
14 |
- |
28162770 |
SKM1 |
viability |
GGACCCCGAGCTCGTAGGAGCGG |
TDP1 |
ENSG00000042088 |
-0.0003389392805181468 |
[42] |
[75] |
0 |
hSpCas9 |
negative selection |
10587574 |
89963342 |
89963365 |
14 |
+ |
28162770 |
SKM1 |
viability |
GCAGAAAAGCGGTTCCCAGGAGG |
TDP1 |
ENSG00000042088 |
0.17799830197799454 |
[76] |
[153] |
1 |
hSpCas9 |
negative selection |
10587575 |
89963663 |
89963686 |
14 |
- |
28162770 |
SKM1 |
viability |
GCATCCTCTTACCCTTGATGTGG |
TDP1 |
ENSG00000042088 |
0.5349328466932699 |
[113] |
[291] |
5 |
hSpCas9 |
negative selection |
10587576 |
89980597 |
89980620 |
14 |
- |
28162770 |
SKM1 |
viability |
GGTGCCAGTCAGCATGGATGAGG |
TDP1 |
ENSG00000042088 |
0.6305105066755012 |
[37] |
[103] |
6 |
hSpCas9 |
negative selection |
10587577 |
89963227 |
89963250 |
14 |
+ |
28162770 |
SKM1 |
viability |
AAGGAGCAGCAAATGAGCCCAGG |
TDP1 |
ENSG00000042088 |
-0.48096478018693867 |
[29] |
[37] |
-4 |
hSpCas9 |
negative selection |
10756934 |
89980610 |
89980633 |
14 |
+ |
28162770 |
SKM1 |
viability |
GACTGGCACCAGAAAACTCAAGG |
TDP1 |
ENSG00000042088 |
0.3530850085360857 |
[30] |
[69] |
3 |
hSpCas9 |
negative selection |
10756935 |
89963543 |
89963566 |
14 |
+ |
28162770 |
SKM1 |
viability |
CGAGTATGAGACATCAGGGGAGG |
TDP1 |
ENSG00000042088 |
-0.5957258421983294 |
[52] |
[61] |
-5 |
hSpCas9 |
negative selection |
10756936 |
89980570 |
89980593 |
14 |
- |
28162770 |
SKM1 |
viability |
AGGTGTGTATGACAACCCGGAGG |
TDP1 |
ENSG00000042088 |
-0.2914869813232256 |
[35] |
[51] |
-2 |
hSpCas9 |
negative selection |
10756937 |
89989027 |
89989050 |
14 |
+ |
28162770 |
SKM1 |
viability |
GAGCATGCTGACACTGGGGAAGG |
TDP1 |
ENSG00000042088 |
0.44103270781178844 |
[59] |
[143] |
4 |
hSpCas9 |
negative selection |
10756938 |
89993400 |
89993423 |
14 |
- |
28162770 |
SKM1 |
viability |
TATGTGGCATGGCATTGCTGCGG |
TDP1 |
ENSG00000042088 |
0.3808151849776816 |
[52] |
[121] |
3 |
hSpCas9 |
negative selection |
10756939 |
90019376 |
90019399 |
14 |
- |
28162770 |
SKM1 |
viability |
GGACCCCGAGCTCGTAGGAGCGG |
TDP1 |
ENSG00000042088 |
-0.0003389392805181468 |
[42] |
[75] |
0 |
hSpCas9 |
negative selection |
10756940 |
89963342 |
89963365 |
14 |
+ |
28162770 |
SKM1 |
viability |
GCAGAAAAGCGGTTCCCAGGAGG |
TDP1 |
ENSG00000042088 |
0.17799830197799454 |
[76] |
[153] |
1 |
hSpCas9 |
negative selection |
10756941 |
89963663 |
89963686 |
14 |
- |
28162770 |
SKM1 |
viability |
GCATCCTCTTACCCTTGATGTGG |
TDP1 |
ENSG00000042088 |
0.5349328466932699 |
[113] |
[291] |
5 |
hSpCas9 |
negative selection |
10756942 |
89980597 |
89980620 |
14 |
- |
28162770 |
SKM1 |
viability |
GGTGCCAGTCAGCATGGATGAGG |
TDP1 |
ENSG00000042088 |
0.6305105066755012 |
[37] |
[103] |
6 |
hSpCas9 |
negative selection |
10756943 |
89963227 |
89963250 |
14 |
+ |
28162770 |
PL21 |
viability |
AAGGAGCAGCAAATGAGCCCAGG |
TDP1 |
ENSG00000042088 |
0.32567049657317904 |
[120] |
[65] |
3 |
hSpCas9 |
negative selection |
10926300 |
89980610 |
89980633 |
14 |
+ |
28162770 |
PL21 |
viability |
GACTGGCACCAGAAAACTCAAGG |
TDP1 |
ENSG00000042088 |
0.5721083918762782 |
[67] |
[43] |
5 |
hSpCas9 |
negative selection |
10926301 |
89963543 |
89963566 |
14 |
+ |
28162770 |
PL21 |
viability |
CGAGTATGAGACATCAGGGGAGG |
TDP1 |
ENSG00000042088 |
-0.4548703837600926 |
[210] |
[66] |
-3 |
hSpCas9 |
negative selection |
10926302 |
89980570 |
89980593 |
14 |
- |
28162770 |
PL21 |
viability |
AGGTGTGTATGACAACCCGGAGG |
TDP1 |
ENSG00000042088 |
-0.6743295034268211 |
[87] |
[23] |
-5 |
hSpCas9 |
negative selection |
10926303 |
89989027 |
89989050 |
14 |
+ |
28162770 |
PL21 |
viability |
GAGCATGCTGACACTGGGGAAGG |
TDP1 |
ENSG00000042088 |
0.7827770622642325 |
[206] |
[154] |
6 |
hSpCas9 |
negative selection |
10926304 |
89993400 |
89993423 |
14 |
- |
28162770 |
PL21 |
viability |
TATGTGGCATGGCATTGCTGCGG |
TDP1 |
ENSG00000042088 |
-0.2569054113110991 |
[150] |
[54] |
-2 |
hSpCas9 |
negative selection |
10926305 |
90019376 |
90019399 |
14 |
- |
28162770 |
PL21 |
viability |
GGACCCCGAGCTCGTAGGAGCGG |
TDP1 |
ENSG00000042088 |
-1.2686298687273134 |
[154] |
[27] |
-7 |
hSpCas9 |
negative selection |
10926306 |
89963342 |
89963365 |
14 |
+ |
28162770 |
PL21 |
viability |
GCAGAAAAGCGGTTCCCAGGAGG |
TDP1 |
ENSG00000042088 |
0.6199941300659397 |
[298] |
[199] |
5 |
hSpCas9 |
negative selection |
10926307 |
89963663 |
89963686 |
14 |
- |
28162770 |
PL21 |
viability |
GCATCCTCTTACCCTTGATGTGG |
TDP1 |
ENSG00000042088 |
1.142761723411745 |
[435] |
[418] |
8 |
hSpCas9 |
negative selection |
10926308 |
89980597 |
89980620 |
14 |
- |
28162770 |
PL21 |
viability |
GGTGCCAGTCAGCATGGATGAGG |
TDP1 |
ENSG00000042088 |
0.7941472548134832 |
[105] |
[79] |
6 |
hSpCas9 |
negative selection |
10926309 |
89963227 |
89963250 |
14 |
+ |
28162770 |
P31FUJ |
viability |
AAGGAGCAGCAAATGAGCCCAGG |
TDP1 |
ENSG00000042088 |
-1.0807991109693287 |
[116] |
[64] |
-6 |
hSpCas9 |
negative selection |
11095666 |
89980610 |
89980633 |
14 |
+ |
28162770 |
P31FUJ |
viability |
GACTGGCACCAGAAAACTCAAGG |
TDP1 |
ENSG00000042088 |
0.2784506101237685 |
[86] |
[123] |
3 |
hSpCas9 |
negative selection |
11095667 |
89963543 |
89963566 |
14 |
+ |
28162770 |
P31FUJ |
viability |
CGAGTATGAGACATCAGGGGAGG |
TDP1 |
ENSG00000042088 |
0.5146557635694698 |
[136] |
[229] |
6 |
hSpCas9 |
negative selection |
11095668 |
89980570 |
89980593 |
14 |
- |
28162770 |
P31FUJ |
viability |
AGGTGTGTATGACAACCCGGAGG |
TDP1 |
ENSG00000042088 |
1.021439082961409 |
[95] |
[228] |
9 |
hSpCas9 |
negative selection |
11095669 |
89989027 |
89989050 |
14 |
+ |
28162770 |
P31FUJ |
viability |
GAGCATGCTGACACTGGGGAAGG |
TDP1 |
ENSG00000042088 |
0.7587855557694212 |
[171] |
[341] |
8 |
hSpCas9 |
negative selection |
11095670 |
89993400 |
89993423 |
14 |
- |
28162770 |
P31FUJ |
viability |
TATGTGGCATGGCATTGCTGCGG |
TDP1 |
ENSG00000042088 |
-0.05047218208128576 |
[192] |
[218] |
0 |
hSpCas9 |
negative selection |
11095671 |
90019376 |
90019399 |
14 |
- |
28162770 |
P31FUJ |
viability |
GGACCCCGAGCTCGTAGGAGCGG |
TDP1 |
ENSG00000042088 |
0.7306719195605071 |
[119] |
[233] |
8 |
hSpCas9 |
negative selection |
11095672 |
89963342 |
89963365 |
14 |
+ |
28162770 |
P31FUJ |
viability |
GCAGAAAAGCGGTTCCCAGGAGG |
TDP1 |
ENSG00000042088 |
0.485784860436973 |
[315] |
[519] |
5 |
hSpCas9 |
negative selection |
11095673 |
89963663 |
89963686 |
14 |
- |
28162770 |
P31FUJ |
viability |
GCATCCTCTTACCCTTGATGTGG |
TDP1 |
ENSG00000042088 |
-0.1393233045564417 |
[731] |
[780] |
-1 |
hSpCas9 |
negative selection |
11095674 |
89980597 |
89980620 |
14 |
- |
28162770 |
P31FUJ |
viability |
GGTGCCAGTCAGCATGGATGAGG |
TDP1 |
ENSG00000042088 |
0.9845546270247709 |
[122] |
[285] |
9 |
hSpCas9 |
negative selection |
11095675 |
89963227 |
89963250 |
14 |
+ |
28162770 |
OCIAML5 |
viability |
AAGGAGCAGCAAATGAGCCCAGG |
TDP1 |
ENSG00000042088 |
0.29568704957969516 |
[50] |
[112] |
2 |
hSpCas9 |
negative selection |
11265032 |
89980610 |
89980633 |
14 |
+ |
28162770 |
OCIAML5 |
viability |
GACTGGCACCAGAAAACTCAAGG |
TDP1 |
ENSG00000042088 |
0.230395589327976 |
[50] |
[107] |
2 |
hSpCas9 |
negative selection |
11265033 |
89963543 |
89963566 |
14 |
+ |
28162770 |
OCIAML5 |
viability |
CGAGTATGAGACATCAGGGGAGG |
TDP1 |
ENSG00000042088 |
0.8169601946456337 |
[49] |
[158] |
7 |
hSpCas9 |
negative selection |
11265034 |
89980570 |
89980593 |
14 |
- |
28162770 |
OCIAML5 |
viability |
AGGTGTGTATGACAACCCGGAGG |
TDP1 |
ENSG00000042088 |
-0.30272797987356204 |
[40] |
[59] |
-2 |
hSpCas9 |
negative selection |
11265035 |
89989027 |
89989050 |
14 |
+ |
28162770 |
OCIAML5 |
viability |
GAGCATGCTGACACTGGGGAAGG |
TDP1 |
ENSG00000042088 |
-0.3495662303348137 |
[119] |
[169] |
-2 |
hSpCas9 |
negative selection |
11265036 |
89993400 |
89993423 |
14 |
- |
28162770 |
OCIAML5 |
viability |
TATGTGGCATGGCATTGCTGCGG |
TDP1 |
ENSG00000042088 |
0.9175522406209606 |
[82] |
[282] |
7 |
hSpCas9 |
negative selection |
11265037 |
90019376 |
90019399 |
14 |
- |
28162770 |
OCIAML5 |
viability |
GGACCCCGAGCTCGTAGGAGCGG |
TDP1 |
ENSG00000042088 |
0.8464248754875735 |
[56] |
[184] |
7 |
hSpCas9 |
negative selection |
11265038 |
89963342 |
89963365 |
14 |
+ |
28162770 |
OCIAML5 |
viability |
GCAGAAAAGCGGTTCCCAGGAGG |
TDP1 |
ENSG00000042088 |
-0.043229681505162265 |
[277] |
[486] |
0 |
hSpCas9 |
negative selection |
11265039 |
89963663 |
89963686 |
14 |
- |
28162770 |
OCIAML5 |
viability |
GCATCCTCTTACCCTTGATGTGG |
TDP1 |
ENSG00000042088 |
0.6935024915570724 |
[296] |
[866] |
6 |
hSpCas9 |
negative selection |
11265040 |
89980597 |
89980620 |
14 |
- |
28162770 |
OCIAML5 |
viability |
GGTGCCAGTCAGCATGGATGAGG |
TDP1 |
ENSG00000042088 |
0.4440655231460279 |
[78] |
[193] |
4 |
hSpCas9 |
negative selection |
11265041 |
89963227 |
89963250 |
14 |
+ |
28162770 |
EOL1 |
viability |
AAGGAGCAGCAAATGAGCCCAGG |
TDP1 |
ENSG00000042088 |
0.7352053163009814 |
[186] |
[163] |
6 |
hSpCas9 |
negative selection |
11434398 |
89980610 |
89980633 |
14 |
+ |
28162770 |
EOL1 |
viability |
GACTGGCACCAGAAAACTCAAGG |
TDP1 |
ENSG00000042088 |
1.1916518417133752 |
[117] |
[141] |
8 |
hSpCas9 |
negative selection |
11434399 |
89963543 |
89963566 |
14 |
+ |
28162770 |
EOL1 |
viability |
CGAGTATGAGACATCAGGGGAGG |
TDP1 |
ENSG00000042088 |
-0.08009859328583041 |
[310] |
[154] |
0 |
hSpCas9 |
negative selection |
11434400 |
89980570 |
89980593 |
14 |
- |
28162770 |
EOL1 |
viability |
AGGTGTGTATGACAACCCGGAGG |
TDP1 |
ENSG00000042088 |
0.3172174578209239 |
[194] |
[127] |
3 |
hSpCas9 |
negative selection |
11434401 |
89989027 |
89989050 |
14 |
+ |
28162770 |
EOL1 |
viability |
GAGCATGCTGACACTGGGGAAGG |
TDP1 |
ENSG00000042088 |
-0.16127159689046938 |
[328] |
[154] |
-1 |
hSpCas9 |
negative selection |
11434402 |
89993400 |
89993423 |
14 |
- |
28162770 |
EOL1 |
viability |
TATGTGGCATGGCATTGCTGCGG |
TDP1 |
ENSG00000042088 |
-0.08971292155463502 |
[304] |
[150] |
0 |
hSpCas9 |
negative selection |
11434403 |
90019376 |
90019399 |
14 |
- |
28162770 |
EOL1 |
viability |
GGACCCCGAGCTCGTAGGAGCGG |
TDP1 |
ENSG00000042088 |
1.029900771716763 |
[131] |
[141] |
8 |
hSpCas9 |
negative selection |
11434404 |
89963342 |
89963365 |
14 |
+ |
28162770 |
EOL1 |
viability |
GCAGAAAAGCGGTTCCCAGGAGG |
TDP1 |
ENSG00000042088 |
0.5286190952393954 |
[349] |
[265] |
5 |
hSpCas9 |
negative selection |
11434405 |
89963663 |
89963686 |
14 |
- |
28162770 |
EOL1 |
viability |
GCATCCTCTTACCCTTGATGTGG |
TDP1 |
ENSG00000042088 |
0.1472948813023499 |
[580] |
[338] |
1 |
hSpCas9 |
negative selection |
11434406 |
89980597 |
89980620 |
14 |
- |
28162770 |
EOL1 |
viability |
GGTGCCAGTCAGCATGGATGAGG |
TDP1 |
ENSG00000042088 |
-2.1372284260161556 |
[166] |
[19] |
-8 |
hSpCas9 |
negative selection |
11434407 |
89963227 |
89963250 |
14 |
+ |
28162770 |
MOLM13 |
viability |
AAGGAGCAGCAAATGAGCCCAGG |
TDP1 |
ENSG00000042088 |
-0.15207956900449038 |
[145] |
[94] |
-1 |
hSpCas9 |
negative selection |
11603764 |
89980610 |
89980633 |
14 |
+ |
28162770 |
MOLM13 |
viability |
GACTGGCACCAGAAAACTCAAGG |
TDP1 |
ENSG00000042088 |
-1.1320234606425488 |
[193] |
[63] |
-5 |
hSpCas9 |
negative selection |
11603765 |
89963543 |
89963566 |
14 |
+ |
28162770 |
MOLM13 |
viability |
CGAGTATGAGACATCAGGGGAGG |
TDP1 |
ENSG00000042088 |
1.2957084061618986 |
[199] |
[354] |
8 |
hSpCas9 |
negative selection |
11603766 |
89980570 |
89980593 |
14 |
- |
28162770 |
MOLM13 |
viability |
AGGTGTGTATGACAACCCGGAGG |
TDP1 |
ENSG00000042088 |
0.13202209569934276 |
[129] |
[102] |
0 |
hSpCas9 |
negative selection |
11603767 |
89989027 |
89989050 |
14 |
+ |
28162770 |
MOLM13 |
viability |
GAGCATGCTGACACTGGGGAAGG |
TDP1 |
ENSG00000042088 |
1.2790140863609067 |
[272] |
[478] |
8 |
hSpCas9 |
negative selection |
11603768 |
89993400 |
89993423 |
14 |
- |
28162770 |
MOLM13 |
viability |
TATGTGGCATGGCATTGCTGCGG |
TDP1 |
ENSG00000042088 |
0.9284045113412464 |
[241] |
[332] |
7 |
hSpCas9 |
negative selection |
11603769 |
90019376 |
90019399 |
14 |
- |
28162770 |
MOLM13 |
viability |
GGACCCCGAGCTCGTAGGAGCGG |
TDP1 |
ENSG00000042088 |
0.07911753695954094 |
[126] |
[96] |
0 |
hSpCas9 |
negative selection |
11603770 |
89963342 |
89963365 |
14 |
+ |
28162770 |
MOLM13 |
viability |
GCAGAAAAGCGGTTCCCAGGAGG |
TDP1 |
ENSG00000042088 |
-0.15258740578951563 |
[328] |
[213] |
-1 |
hSpCas9 |
negative selection |
11603771 |
89963663 |
89963686 |
14 |
- |
28162770 |
MOLM13 |
viability |
GCATCCTCTTACCCTTGATGTGG |
TDP1 |
ENSG00000042088 |
0.502088198650084 |
[666] |
[682] |
4 |
hSpCas9 |
negative selection |
11603772 |
89980597 |
89980620 |
14 |
- |
28162770 |
MOLM13 |
viability |
GGTGCCAGTCAGCATGGATGAGG |
TDP1 |
ENSG00000042088 |
-0.45996083269958576 |
[155] |
[81] |
-3 |
hSpCas9 |
negative selection |
11603773 |
89963227 |
89963250 |
14 |
+ |
28162770 |
HEL |
viability |
AAGGAGCAGCAAATGAGCCCAGG |
TDP1 |
ENSG00000042088 |
1.154078469578333 |
[133] |
[190] |
8 |
hSpCas9 |
negative selection |
11773130 |
89980610 |
89980633 |
14 |
+ |
28162770 |
HEL |
viability |
GACTGGCACCAGAAAACTCAAGG |
TDP1 |
ENSG00000042088 |
-0.014373454476634628 |
[122] |
[77] |
0 |
hSpCas9 |
negative selection |
11773131 |
89963543 |
89963566 |
14 |
+ |
28162770 |
HEL |
viability |
CGAGTATGAGACATCAGGGGAGG |
TDP1 |
ENSG00000042088 |
0.3603391012996321 |
[269] |
[221] |
3 |
hSpCas9 |
negative selection |
11773132 |
89980570 |
89980593 |
14 |
- |
28162770 |
HEL |
viability |
AGGTGTGTATGACAACCCGGAGG |
TDP1 |
ENSG00000042088 |
0.9431337653380779 |
[107] |
[132] |
7 |
hSpCas9 |
negative selection |
11773133 |
89989027 |
89989050 |
14 |
+ |
28162770 |
HEL |
viability |
GAGCATGCTGACACTGGGGAAGG |
TDP1 |
ENSG00000042088 |
0.40016852872627867 |
[251] |
[212] |
3 |
hSpCas9 |
negative selection |
11773134 |
89993400 |
89993423 |
14 |
- |
28162770 |
HEL |
viability |
TATGTGGCATGGCATTGCTGCGG |
TDP1 |
ENSG00000042088 |
0.0667651145064555 |
[239] |
[160] |
0 |
hSpCas9 |
negative selection |
11773135 |
90019376 |
90019399 |
14 |
- |
28162770 |
HEL |
viability |
GGACCCCGAGCTCGTAGGAGCGG |
TDP1 |
ENSG00000042088 |
-1.407887241069611 |
[144] |
[34] |
-7 |
hSpCas9 |
negative selection |
11773136 |
89963342 |
89963365 |
14 |
+ |
28162770 |
HEL |
viability |
GCAGAAAAGCGGTTCCCAGGAGG |
TDP1 |
ENSG00000042088 |
-0.6982980858347101 |
[303] |
[119] |
-4 |
hSpCas9 |
negative selection |
11773137 |
89963663 |
89963686 |
14 |
- |
28162770 |
HEL |
viability |
GCATCCTCTTACCCTTGATGTGG |
TDP1 |
ENSG00000042088 |
-0.6991231902557642 |
[582] |
[229] |
-4 |
hSpCas9 |
negative selection |
11773138 |
89980597 |
89980620 |
14 |
- |
28162770 |
HEL |
viability |
GGTGCCAGTCAGCATGGATGAGG |
TDP1 |
ENSG00000042088 |
-0.03045085173253459 |
[117] |
[73] |
0 |
hSpCas9 |
negative selection |
11773139 |
89963227 |
89963250 |
14 |
+ |
28162770 |
MV411 |
viability |
AAGGAGCAGCAAATGAGCCCAGG |
TDP1 |
ENSG00000042088 |
0.4021601455814172 |
[105] |
[117] |
3 |
hSpCas9 |
negative selection |
11942496 |
89980610 |
89980633 |
14 |
+ |
28162770 |
MV411 |
viability |
GACTGGCACCAGAAAACTCAAGG |
TDP1 |
ENSG00000042088 |
1.0749703547780096 |
[70] |
[125] |
8 |
hSpCas9 |
negative selection |
11942497 |
89963543 |
89963566 |
14 |
+ |
28162770 |
MV411 |
viability |
CGAGTATGAGACATCAGGGGAGG |
TDP1 |
ENSG00000042088 |
0.2883098321983034 |
[173] |
[178] |
2 |
hSpCas9 |
negative selection |
11942498 |
89980570 |
89980593 |
14 |
- |
28162770 |
MV411 |
viability |
AGGTGTGTATGACAACCCGGAGG |
TDP1 |
ENSG00000042088 |
-1.2595224379371082 |
[107] |
[37] |
-7 |
hSpCas9 |
negative selection |
11942499 |
89989027 |
89989050 |
14 |
+ |
28162770 |
MV411 |
viability |
GAGCATGCTGACACTGGGGAAGG |
TDP1 |
ENSG00000042088 |
0.2850752081461404 |
[226] |
[232] |
2 |
hSpCas9 |
negative selection |
11942500 |
89993400 |
89993423 |
14 |
- |
28162770 |
MV411 |
viability |
TATGTGGCATGGCATTGCTGCGG |
TDP1 |
ENSG00000042088 |
-0.4204179582867257 |
[196] |
[123] |
-3 |
hSpCas9 |
negative selection |
11942501 |
90019376 |
90019399 |
14 |
- |
28162770 |
MV411 |
viability |
GGACCCCGAGCTCGTAGGAGCGG |
TDP1 |
ENSG00000042088 |
1.1109355508779133 |
[71] |
[130] |
8 |
hSpCas9 |
negative selection |
11942502 |
89963342 |
89963365 |
14 |
+ |
28162770 |
MV411 |
viability |
GCAGAAAAGCGGTTCCCAGGAGG |
TDP1 |
ENSG00000042088 |
0.29966750955533306 |
[216] |
[224] |
2 |
hSpCas9 |
negative selection |
11942503 |
89963663 |
89963686 |
14 |
- |
28162770 |
MV411 |
viability |
GCATCCTCTTACCCTTGATGTGG |
TDP1 |
ENSG00000042088 |
0.05279011992923155 |
[411] |
[359] |
0 |
hSpCas9 |
negative selection |
11942504 |
89980597 |
89980620 |
14 |
- |
28162770 |
MV411 |
viability |
GGTGCCAGTCAGCATGGATGAGG |
TDP1 |
ENSG00000042088 |
1.0106346865221614 |
[108] |
[184] |
8 |
hSpCas9 |
negative selection |
11942505 |
89963227 |
89963250 |
14 |
+ |
28162770 |
MONOMAC1 |
viability |
AAGGAGCAGCAAATGAGCCCAGG |
TDP1 |
ENSG00000042088 |
0.2180006522192902 |
[89] |
[119] |
2 |
hSpCas9 |
negative selection |
12111862 |
89980610 |
89980633 |
14 |
+ |
28162770 |
MONOMAC1 |
viability |
GACTGGCACCAGAAAACTCAAGG |
TDP1 |
ENSG00000042088 |
1.581936273628228 |
[43] |
[150] |
9 |
hSpCas9 |
negative selection |
12111863 |
89963543 |
89963566 |
14 |
+ |
28162770 |
MONOMAC1 |
viability |
CGAGTATGAGACATCAGGGGAGG |
TDP1 |
ENSG00000042088 |
0.3411773944701234 |
[114] |
[166] |
3 |
hSpCas9 |
negative selection |
12111864 |
89980570 |
89980593 |
14 |
- |
28162770 |
MONOMAC1 |
viability |
AGGTGTGTATGACAACCCGGAGG |
TDP1 |
ENSG00000042088 |
0.18998627604969354 |
[64] |
[84] |
2 |
hSpCas9 |
negative selection |
12111865 |
89989027 |
89989050 |
14 |
+ |
28162770 |
MONOMAC1 |
viability |
GAGCATGCTGACACTGGGGAAGG |
TDP1 |
ENSG00000042088 |
0.3648420405485611 |
[125] |
[185] |
3 |
hSpCas9 |
negative selection |
12111866 |
89993400 |
89993423 |
14 |
- |
28162770 |
MONOMAC1 |
viability |
TATGTGGCATGGCATTGCTGCGG |
TDP1 |
ENSG00000042088 |
0.4653301573472091 |
[126] |
[200] |
4 |
hSpCas9 |
negative selection |
12111867 |
90019376 |
90019399 |
14 |
- |
28162770 |
MONOMAC1 |
viability |
GGACCCCGAGCTCGTAGGAGCGG |
TDP1 |
ENSG00000042088 |
0.7519792242216414 |
[71] |
[138] |
7 |
hSpCas9 |
negative selection |
12111868 |
89963342 |
89963365 |
14 |
+ |
28162770 |
MONOMAC1 |
viability |
GCAGAAAAGCGGTTCCCAGGAGG |
TDP1 |
ENSG00000042088 |
-0.4250648030654343 |
[170] |
[145] |
-4 |
hSpCas9 |
negative selection |
12111869 |
89963663 |
89963686 |
14 |
- |
28162770 |
MONOMAC1 |
viability |
GCATCCTCTTACCCTTGATGTGG |
TDP1 |
ENSG00000042088 |
0.2947068257014167 |
[292] |
[411] |
3 |
hSpCas9 |
negative selection |
12111870 |
89980597 |
89980620 |
14 |
- |
28162770 |
MONOMAC1 |
viability |
GGTGCCAGTCAGCATGGATGAGG |
TDP1 |
ENSG00000042088 |
0.7404990659937927 |
[58] |
[112] |
7 |
hSpCas9 |
negative selection |
12111871 |
89963227 |
89963250 |
14 |
+ |
28162770 |
OCIAML2 |
viability |
AAGGAGCAGCAAATGAGCCCAGG |
TDP1 |
ENSG00000042088 |
0.29692408875746806 |
[20] |
[142] |
3 |
hSpCas9 |
negative selection |
12281228 |
89980610 |
89980633 |
14 |
+ |
28162770 |
OCIAML2 |
viability |
GACTGGCACCAGAAAACTCAAGG |
TDP1 |
ENSG00000042088 |
-0.6930222465786091 |
[13] |
[47] |
-5 |
hSpCas9 |
negative selection |
12281229 |
89963543 |
89963566 |
14 |
+ |
28162770 |
OCIAML2 |
viability |
CGAGTATGAGACATCAGGGGAGG |
TDP1 |
ENSG00000042088 |
1.5697844432037469 |
[21] |
[361] |
9 |
hSpCas9 |
negative selection |
12281230 |
89980570 |
89980593 |
14 |
- |
28162770 |
OCIAML2 |
viability |
AGGTGTGTATGACAACCCGGAGG |
TDP1 |
ENSG00000042088 |
-0.16077456265537382 |
[23] |
[118] |
-1 |
hSpCas9 |
negative selection |
12281231 |
89989027 |
89989050 |
14 |
+ |
28162770 |
OCIAML2 |
viability |
GAGCATGCTGACACTGGGGAAGG |
TDP1 |
ENSG00000042088 |
0.260881338831937 |
[52] |
[351] |
2 |
hSpCas9 |
negative selection |
12281232 |
89993400 |
89993423 |
14 |
- |
28162770 |
OCIAML2 |
viability |
TATGTGGCATGGCATTGCTGCGG |
TDP1 |
ENSG00000042088 |
1.0104968644944552 |
[35] |
[401] |
8 |
hSpCas9 |
negative selection |
12281233 |
90019376 |
90019399 |
14 |
- |
28162770 |
OCIAML2 |
viability |
GGACCCCGAGCTCGTAGGAGCGG |
TDP1 |
ENSG00000042088 |
0.11433267547899506 |
[22] |
[137] |
1 |
hSpCas9 |
negative selection |
12281234 |
89963342 |
89963365 |
14 |
+ |
28162770 |
OCIAML2 |
viability |
GCAGAAAAGCGGTTCCCAGGAGG |
TDP1 |
ENSG00000042088 |
0.2723345095454882 |
[35] |
[240] |
2 |
hSpCas9 |
negative selection |
12281235 |
89963663 |
89963686 |
14 |
- |
28162770 |
OCIAML2 |
viability |
GCATCCTCTTACCCTTGATGTGG |
TDP1 |
ENSG00000042088 |
-0.06537334675590278 |
[73] |
[391] |
0 |
hSpCas9 |
negative selection |
12281236 |
89980597 |
89980620 |
14 |
- |
28162770 |
OCIAML2 |
viability |
GGTGCCAGTCAGCATGGATGAGG |
TDP1 |
ENSG00000042088 |
0.4951544594199261 |
[15] |
[124] |
5 |
hSpCas9 |
negative selection |
12281237 |
89963227 |
89963250 |
14 |
+ |
28162770 |
OCIAML3 |
viability |
AAGGAGCAGCAAATGAGCCCAGG |
TDP1 |
ENSG00000042088 |
0.5129075635923487 |
[25] |
[111] |
5 |
hSpCas9 |
negative selection |
12450594 |
89980610 |
89980633 |
14 |
+ |
28162770 |
OCIAML3 |
viability |
GACTGGCACCAGAAAACTCAAGG |
TDP1 |
ENSG00000042088 |
-0.3595423866871401 |
[16] |
[39] |
-3 |
hSpCas9 |
negative selection |
12450595 |
89963543 |
89963566 |
14 |
+ |
28162770 |
OCIAML3 |
viability |
CGAGTATGAGACATCAGGGGAGG |
TDP1 |
ENSG00000042088 |
-0.3716152189877153 |
[44] |
[104] |
-3 |
hSpCas9 |
negative selection |
12450596 |
89980570 |
89980593 |
14 |
- |
28162770 |
OCIAML3 |
viability |
AGGTGTGTATGACAACCCGGAGG |
TDP1 |
ENSG00000042088 |
-0.12270192139857428 |
[21] |
[60] |
-1 |
hSpCas9 |
negative selection |
12450597 |
89989027 |
89989050 |
14 |
+ |
28162770 |
OCIAML3 |
viability |
GAGCATGCTGACACTGGGGAAGG |
TDP1 |
ENSG00000042088 |
-0.04075399933034521 |
[45] |
[134] |
0 |
hSpCas9 |
negative selection |
12450598 |
89993400 |
89993423 |
14 |
- |
28162770 |
OCIAML3 |
viability |
TATGTGGCATGGCATTGCTGCGG |
TDP1 |
ENSG00000042088 |
-0.04651984502166992 |
[51] |
[151] |
0 |
hSpCas9 |
negative selection |
12450599 |
90019376 |
90019399 |
14 |
- |
28162770 |
OCIAML3 |
viability |
GGACCCCGAGCTCGTAGGAGCGG |
TDP1 |
ENSG00000042088 |
0.6966695205787594 |
[27] |
[136] |
6 |
hSpCas9 |
negative selection |
12450600 |
89963342 |
89963365 |
14 |
+ |
28162770 |
OCIAML3 |
viability |
GCAGAAAAGCGGTTCCCAGGAGG |
TDP1 |
ENSG00000042088 |
0.6161064512338481 |
[58] |
[272] |
5 |
hSpCas9 |
negative selection |
12450601 |
89963663 |
89963686 |
14 |
- |
28162770 |
OCIAML3 |
viability |
GCATCCTCTTACCCTTGATGTGG |
TDP1 |
ENSG00000042088 |
0.22378902845508764 |
[117] |
[415] |
2 |
hSpCas9 |
negative selection |
12450602 |
89980597 |
89980620 |
14 |
- |
28162770 |
OCIAML3 |
viability |
GGTGCCAGTCAGCATGGATGAGG |
TDP1 |
ENSG00000042088 |
-1.280849755064533 |
[32] |
[40] |
-7 |
hSpCas9 |
negative selection |
12450603 |