| 16086519 |
16086542 |
19 |
+ |
26472758 |
Jiyoye |
viability |
GGCTGACCGCAAATACGAGGAGG |
TPM4 |
ENSG00000167460 |
1.0316662464136672 |
[47] |
[73] |
6 |
hSpCas9 |
negative selection |
171040 |
16067648 |
16067671 |
19 |
+ |
26472758 |
Jiyoye |
viability |
GCAGATGCTGAAGTTGGACAAGG |
TPM4 |
ENSG00000167460 |
0.857208302140921 |
[223] |
[305] |
6 |
hSpCas9 |
negative selection |
171041 |
16088065 |
16088088 |
19 |
+ |
26472758 |
Jiyoye |
viability |
GAGGGCAGAGGAGCGTGCGGAGG |
TPM4 |
ENSG00000167460 |
-0.3400585481141597 |
[93] |
[55] |
-2 |
hSpCas9 |
negative selection |
171042 |
16081992 |
16082015 |
19 |
- |
26472758 |
Jiyoye |
viability |
CTCCAGCTTCTGCAGGGCCGTGG |
TPM4 |
ENSG00000167460 |
0.6019037739487584 |
[172] |
[197] |
4 |
hSpCas9 |
negative selection |
171043 |
16093529 |
16093552 |
19 |
+ |
26472758 |
Jiyoye |
viability |
CCCACAGTATTCTGAAAAGGAGG |
TPM4 |
ENSG00000167460 |
-0.44976156940229084 |
[258] |
[142] |
-3 |
hSpCas9 |
negative selection |
171044 |
16086411 |
16086434 |
19 |
+ |
26472758 |
Jiyoye |
viability |
TGCTCCTTGCAGAGGAATGAAGG |
TPM4 |
ENSG00000167460 |
1.3565493084359057 |
[28] |
[55] |
7 |
hSpCas9 |
negative selection |
171045 |
16089039 |
16089062 |
19 |
+ |
26472758 |
Jiyoye |
viability |
GTGCAGAAAATGTGGTGACCTGG |
TPM4 |
ENSG00000167460 |
1.1888943765766282 |
[145] |
[250] |
7 |
hSpCas9 |
negative selection |
171046 |
16088020 |
16088043 |
19 |
+ |
26472758 |
Jiyoye |
viability |
TCTGCAGGTAGCTCGTAAGCTGG |
TPM4 |
ENSG00000167460 |
3.1027819459110226 |
[22] |
[148] |
9 |
hSpCas9 |
negative selection |
171047 |
16101256 |
16101279 |
19 |
+ |
26472758 |
Jiyoye |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
0.5915999526433007 |
[43] |
[49] |
4 |
hSpCas9 |
negative selection |
171048 |
16086519 |
16086542 |
19 |
+ |
26472758 |
KBM7 |
viability |
GGCTGACCGCAAATACGAGGAGG |
TPM4 |
ENSG00000167460 |
-0.7766589337032334 |
[363,286] |
[103,74] |
-6 |
hSpCas9 |
negative selection |
362158 |
16067648 |
16067671 |
19 |
+ |
26472758 |
KBM7 |
viability |
GCAGATGCTGAAGTTGGACAAGG |
TPM4 |
ENSG00000167460 |
0.4124714089332371 |
[1532,1465] |
[698,1156] |
4 |
hSpCas9 |
negative selection |
362159 |
16088065 |
16088088 |
19 |
+ |
26472758 |
KBM7 |
viability |
GAGGGCAGAGGAGCGTGCGGAGG |
TPM4 |
ENSG00000167460 |
0.08163722005941765 |
[345,288] |
[113,195] |
0 |
hSpCas9 |
negative selection |
362160 |
16081992 |
16082015 |
19 |
- |
26472758 |
KBM7 |
viability |
CTCCAGCTTCTGCAGGGCCGTGG |
TPM4 |
ENSG00000167460 |
0.4473649041235206 |
[577,399] |
[380,244] |
5 |
hSpCas9 |
negative selection |
362161 |
16093529 |
16093552 |
19 |
+ |
26472758 |
KBM7 |
viability |
CCCACAGTATTCTGAAAAGGAGG |
TPM4 |
ENSG00000167460 |
-0.7226416811033589 |
[855,424] |
[278,85] |
-6 |
hSpCas9 |
negative selection |
362162 |
16086411 |
16086434 |
19 |
+ |
26472758 |
KBM7 |
viability |
TGCTCCTTGCAGAGGAATGAAGG |
TPM4 |
ENSG00000167460 |
0.6348472439550409 |
[430,323] |
[320,229] |
7 |
hSpCas9 |
negative selection |
362163 |
16089039 |
16089062 |
19 |
+ |
26472758 |
KBM7 |
viability |
GTGCAGAAAATGTGGTGACCTGG |
TPM4 |
ENSG00000167460 |
0.024544931787038538 |
[1041,975] |
[288,656] |
0 |
hSpCas9 |
negative selection |
362164 |
16088020 |
16088043 |
19 |
+ |
26472758 |
KBM7 |
viability |
TCTGCAGGTAGCTCGTAAGCTGG |
TPM4 |
ENSG00000167460 |
0.007793675469299752 |
[365,498] |
[129,278] |
0 |
hSpCas9 |
negative selection |
362165 |
16101256 |
16101279 |
19 |
+ |
26472758 |
KBM7 |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
-0.6682679234869638 |
[598,332] |
[152,117] |
-5 |
hSpCas9 |
negative selection |
362166 |
16086519 |
16086542 |
19 |
+ |
26472758 |
Raji |
viability |
GGCTGACCGCAAATACGAGGAGG |
TPM4 |
ENSG00000167460 |
0.18538604737487263 |
[143] |
[37] |
1 |
hSpCas9 |
negative selection |
553276 |
16067648 |
16067671 |
19 |
+ |
26472758 |
Raji |
viability |
GCAGATGCTGAAGTTGGACAAGG |
TPM4 |
ENSG00000167460 |
0.12324994083262042 |
[632] |
[159] |
1 |
hSpCas9 |
negative selection |
553277 |
16088065 |
16088088 |
19 |
+ |
26472758 |
Raji |
viability |
GAGGGCAGAGGAGCGTGCGGAGG |
TPM4 |
ENSG00000167460 |
-0.018147346710259304 |
[95] |
[21] |
0 |
hSpCas9 |
negative selection |
553278 |
16081992 |
16082015 |
19 |
- |
26472758 |
Raji |
viability |
CTCCAGCTTCTGCAGGGCCGTGG |
TPM4 |
ENSG00000167460 |
0.9489541727691165 |
[249] |
[111] |
8 |
hSpCas9 |
negative selection |
553279 |
16093529 |
16093552 |
19 |
+ |
26472758 |
Raji |
viability |
CCCACAGTATTCTGAAAAGGAGG |
TPM4 |
ENSG00000167460 |
0.6168134049273981 |
[280] |
[99] |
6 |
hSpCas9 |
negative selection |
553280 |
16086411 |
16086434 |
19 |
+ |
26472758 |
Raji |
viability |
TGCTCCTTGCAGAGGAATGAAGG |
TPM4 |
ENSG00000167460 |
0.5898489621727341 |
[208] |
[72] |
5 |
hSpCas9 |
negative selection |
553281 |
16089039 |
16089062 |
19 |
+ |
26472758 |
Raji |
viability |
GTGCAGAAAATGTGGTGACCTGG |
TPM4 |
ENSG00000167460 |
-0.16237673364850758 |
[515] |
[106] |
-1 |
hSpCas9 |
negative selection |
553282 |
16088020 |
16088043 |
19 |
+ |
26472758 |
Raji |
viability |
TCTGCAGGTAGCTCGTAAGCTGG |
TPM4 |
ENSG00000167460 |
0.050352590337220504 |
[128] |
[30] |
0 |
hSpCas9 |
negative selection |
553283 |
16101256 |
16101279 |
19 |
+ |
26472758 |
Raji |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
-0.14054397806998623 |
[265] |
[55] |
-1 |
hSpCas9 |
negative selection |
553284 |
16086519 |
16086542 |
19 |
+ |
26472758 |
K562 |
viability |
GGCTGACCGCAAATACGAGGAGG |
TPM4 |
ENSG00000167460 |
0.2871231786206853 |
[232] |
[239] |
2 |
hSpCas9 |
negative selection |
744394 |
16067648 |
16067671 |
19 |
+ |
26472758 |
K562 |
viability |
GCAGATGCTGAAGTTGGACAAGG |
TPM4 |
ENSG00000167460 |
0.07391929060400737 |
[1255] |
[1115] |
0 |
hSpCas9 |
negative selection |
744395 |
16088065 |
16088088 |
19 |
+ |
26472758 |
K562 |
viability |
GAGGGCAGAGGAGCGTGCGGAGG |
TPM4 |
ENSG00000167460 |
-1.4525122046975065 |
[307] |
[94] |
-6 |
hSpCas9 |
negative selection |
744396 |
16081992 |
16082015 |
19 |
- |
26472758 |
K562 |
viability |
CTCCAGCTTCTGCAGGGCCGTGG |
TPM4 |
ENSG00000167460 |
1.1958557622282273 |
[286] |
[554] |
8 |
hSpCas9 |
negative selection |
744397 |
16093529 |
16093552 |
19 |
+ |
26472758 |
K562 |
viability |
CCCACAGTATTCTGAAAAGGAGG |
TPM4 |
ENSG00000167460 |
0.8092033464499726 |
[527] |
[780] |
6 |
hSpCas9 |
negative selection |
744398 |
16086411 |
16086434 |
19 |
+ |
26472758 |
K562 |
viability |
TGCTCCTTGCAGAGGAATGAAGG |
TPM4 |
ENSG00000167460 |
-0.5948872186244587 |
[330] |
[184] |
-4 |
hSpCas9 |
negative selection |
744399 |
16089039 |
16089062 |
19 |
+ |
26472758 |
K562 |
viability |
GTGCAGAAAATGTGGTGACCTGG |
TPM4 |
ENSG00000167460 |
-0.11518401651639887 |
[901] |
[702] |
-1 |
hSpCas9 |
negative selection |
744400 |
16088020 |
16088043 |
19 |
+ |
26472758 |
K562 |
viability |
TCTGCAGGTAGCTCGTAAGCTGG |
TPM4 |
ENSG00000167460 |
0.8739467808210475 |
[339] |
[525] |
7 |
hSpCas9 |
negative selection |
744401 |
16101256 |
16101279 |
19 |
+ |
26472758 |
K562 |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
0.016551176263847722 |
[307] |
[262] |
0 |
hSpCas9 |
negative selection |
744402 |
16081909 |
16081932 |
19 |
- |
26627737 |
DLD1 |
viability |
CGGCCACATCACCTTCAGCCTGG |
TPM4 |
ENSG00000167460 |
0.014532094891549052 |
[1114] |
[214,305,508] |
0 |
hSpCas9 |
negative selection |
803095 |
16101256 |
16101279 |
19 |
+ |
26627737 |
DLD1 |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
0.7052342877720683 |
[365] |
[153,248,162] |
7 |
hSpCas9 |
negative selection |
803097 |
16081909 |
16081932 |
19 |
- |
26627737 |
GBM cells |
viability after 5 days |
CGGCCACATCACCTTCAGCCTGG |
TPM4 |
ENSG00000167460 |
0.2701228725442666 |
[517] |
[380,288] |
4 |
hSpCas9 |
negative selection |
885410 |
16101256 |
16101279 |
19 |
+ |
26627737 |
GBM cells |
viability after 5 days |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
-0.2747342125993439 |
[193] |
[72,98] |
-4 |
hSpCas9 |
negative selection |
885412 |
16081909 |
16081932 |
19 |
- |
26627737 |
GBM cells |
viability after 13 days |
CGGCCACATCACCTTCAGCCTGG |
TPM4 |
ENSG00000167460 |
0.15588972397446432 |
[517] |
[434,213] |
2 |
hSpCas9 |
negative selection |
967725 |
16101256 |
16101279 |
19 |
+ |
26627737 |
GBM cells |
viability after 13 days |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
0.2836812679588884 |
[193] |
[115,137] |
3 |
hSpCas9 |
negative selection |
967727 |
16081909 |
16081932 |
19 |
- |
26627737 |
GBM cells |
viability after 21 days |
CGGCCACATCACCTTCAGCCTGG |
TPM4 |
ENSG00000167460 |
0.01272051301066246 |
[517] |
[285,281] |
0 |
hSpCas9 |
negative selection |
1050040 |
16101256 |
16101279 |
19 |
+ |
26627737 |
GBM cells |
viability after 21 days |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
0.47737329171156945 |
[193] |
[152,140] |
5 |
hSpCas9 |
negative selection |
1050042 |
16081909 |
16081932 |
19 |
- |
26627737 |
RPE1 |
viability after 9 days |
CGGCCACATCACCTTCAGCCTGG |
TPM4 |
ENSG00000167460 |
-1.4488850392828088 |
[4022] |
[449,475] |
-8 |
hSpCas9 |
negative selection |
1132355 |
16101256 |
16101279 |
19 |
+ |
26627737 |
RPE1 |
viability after 9 days |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
-1.3876524156673589 |
[1041] |
[149,91] |
-7 |
hSpCas9 |
negative selection |
1132357 |
16081909 |
16081932 |
19 |
- |
26627737 |
RPE1 |
viability after 12 days |
CGGCCACATCACCTTCAGCCTGG |
TPM4 |
ENSG00000167460 |
-1.1020557102013577 |
[4022] |
[622,376] |
-6 |
hSpCas9 |
negative selection |
1214670 |
16101256 |
16101279 |
19 |
+ |
26627737 |
RPE1 |
viability after 12 days |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
-1.1422921742252434 |
[1041] |
[171,78] |
-7 |
hSpCas9 |
negative selection |
1214672 |
16081909 |
16081932 |
19 |
- |
26627737 |
RPE1 |
viability after 15 days |
CGGCCACATCACCTTCAGCCTGG |
TPM4 |
ENSG00000167460 |
-1.309843031493205 |
[4022] |
[456,460] |
-7 |
hSpCas9 |
negative selection |
1296985 |
16101256 |
16101279 |
19 |
+ |
26627737 |
RPE1 |
viability after 15 days |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
-0.8363960457911839 |
[1041] |
[216,114] |
-5 |
hSpCas9 |
negative selection |
1296987 |
16081909 |
16081932 |
19 |
- |
26627737 |
RPE1 |
viability after 18 days |
CGGCCACATCACCTTCAGCCTGG |
TPM4 |
ENSG00000167460 |
-1.2508381483798379 |
[4022] |
[403,511] |
-6 |
hSpCas9 |
negative selection |
1379300 |
16101256 |
16101279 |
19 |
+ |
26627737 |
RPE1 |
viability after 18 days |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
-0.7644327716571901 |
[1041] |
[224,101] |
-5 |
hSpCas9 |
negative selection |
1379302 |
16081909 |
16081932 |
19 |
- |
26627737 |
HeLa |
viability after 8 days |
CGGCCACATCACCTTCAGCCTGG |
TPM4 |
ENSG00000167460 |
0.9894174806112694 |
[823] |
[882,559,728] |
7 |
hSpCas9 |
negative selection |
1461615 |
16101256 |
16101279 |
19 |
+ |
26627737 |
HeLa |
viability after 8 days |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
1.0898558488268626 |
[120] |
[298,49,33] |
8 |
hSpCas9 |
negative selection |
1461617 |
16081909 |
16081932 |
19 |
- |
26627737 |
HeLa |
viability after 12 days |
CGGCCACATCACCTTCAGCCTGG |
TPM4 |
ENSG00000167460 |
0.9672519430509188 |
[823] |
[608,473,932] |
7 |
hSpCas9 |
negative selection |
1543930 |
16101256 |
16101279 |
19 |
+ |
26627737 |
HeLa |
viability after 12 days |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
0.9629054723475137 |
[120] |
[70,112,105] |
7 |
hSpCas9 |
negative selection |
1543932 |
16081909 |
16081932 |
19 |
- |
26627737 |
HeLa |
viability after 15 days |
CGGCCACATCACCTTCAGCCTGG |
TPM4 |
ENSG00000167460 |
0.8296169715372805 |
[823] |
[630,452,712] |
6 |
hSpCas9 |
negative selection |
1626245 |
16101256 |
16101279 |
19 |
+ |
26627737 |
HeLa |
viability after 15 days |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
1.1186819790998472 |
[120] |
[50,146,124] |
7 |
hSpCas9 |
negative selection |
1626247 |
16081909 |
16081932 |
19 |
- |
26627737 |
HeLa |
viability after 18 days |
CGGCCACATCACCTTCAGCCTGG |
TPM4 |
ENSG00000167460 |
0.8230618601653679 |
[823] |
[414,378,712] |
6 |
hSpCas9 |
negative selection |
1708560 |
16101256 |
16101279 |
19 |
+ |
26627737 |
HeLa |
viability after 18 days |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
1.128390242432257 |
[120] |
[32,124,124] |
7 |
hSpCas9 |
negative selection |
1708562 |
16081909 |
16081932 |
19 |
- |
26627737 |
HCT116 |
viability after 6 days |
CGGCCACATCACCTTCAGCCTGG |
TPM4 |
ENSG00000167460 |
0.027328311633563418 |
[1620] |
[425,167] |
0 |
hSpCas9 |
negative selection |
1790875 |
16101256 |
16101279 |
19 |
+ |
26627737 |
HCT116 |
viability after 6 days |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
2.592891354035187 |
[461] |
[967,145] |
9 |
hSpCas9 |
negative selection |
1790877 |
16081909 |
16081932 |
19 |
- |
26627737 |
HCT116 |
viability after 8 days |
CGGCCACATCACCTTCAGCCTGG |
TPM4 |
ENSG00000167460 |
0.29543818275294387 |
[559] |
[444,289,401] |
3 |
hSpCas9 |
negative selection |
1873190 |
16101256 |
16101279 |
19 |
+ |
26627737 |
HCT116 |
viability after 8 days |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
-1.694388865947497 |
[383] |
[89,75,30] |
-9 |
hSpCas9 |
negative selection |
1873192 |
16081909 |
16081932 |
19 |
- |
26627737 |
HCT116 |
viability after 9 days |
CGGCCACATCACCTTCAGCCTGG |
TPM4 |
ENSG00000167460 |
0.174176955958939 |
[1620] |
[541,445] |
1 |
hSpCas9 |
negative selection |
1955505 |
16101256 |
16101279 |
19 |
+ |
26627737 |
HCT116 |
viability after 9 days |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
0.45811382826012176 |
[461] |
[288,74] |
3 |
hSpCas9 |
negative selection |
1955507 |
16081909 |
16081932 |
19 |
- |
26627737 |
HCT116 |
viability after 12 days |
CGGCCACATCACCTTCAGCCTGG |
TPM4 |
ENSG00000167460 |
0.6110382550857169 |
[559] |
[534,326,475] |
6 |
hSpCas9 |
negative selection |
2037820 |
16101256 |
16101279 |
19 |
+ |
26627737 |
HCT116 |
viability after 12 days |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
-1.384118748556336 |
[383] |
[107,66,53] |
-8 |
hSpCas9 |
negative selection |
2037822 |
16081909 |
16081932 |
19 |
- |
26627737 |
HCT116 |
viability after 15 days |
CGGCCACATCACCTTCAGCCTGG |
TPM4 |
ENSG00000167460 |
0.5133659441959734 |
[559] |
[562,383,442] |
5 |
hSpCas9 |
negative selection |
2120135 |
16101256 |
16101279 |
19 |
+ |
26627737 |
HCT116 |
viability after 15 days |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
-1.0085375145932418 |
[383] |
[133,103,93] |
-7 |
hSpCas9 |
negative selection |
2120137 |
16081909 |
16081932 |
19 |
- |
26627737 |
HCT116 |
viability after 18 days |
CGGCCACATCACCTTCAGCCTGG |
TPM4 |
ENSG00000167460 |
1.052745564126751 |
[559] |
[752,327,621] |
7 |
hSpCas9 |
negative selection |
2202450 |
16101256 |
16101279 |
19 |
+ |
26627737 |
HCT116 |
viability after 18 days |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
-1.2299831413042324 |
[383] |
[69,137,22] |
-8 |
hSpCas9 |
negative selection |
2202452 |
16067306 |
16067329 |
19 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
GGTTAAAAATGGAAACAGCTAGG |
TPM4 |
ENSG00000167460 |
0.6029790411592009 |
[965,99] |
[224,122] |
2 |
dCas9-VP64 |
positive selection |
2402317 |
16067341 |
16067364 |
19 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
TCTTCCTTTAAGAAAATCCTAGG |
TPM4 |
ENSG00000167460 |
-0.5856817180266497 |
[127,153] |
[23,15] |
-3 |
dCas9-VP64 |
positive selection |
2402318 |
16067384 |
16067407 |
19 |
- |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
TGGCCAGCTCACCGTGCTCCCGG |
TPM4 |
ENSG00000167460 |
-0.3803916852512492 |
[408,38] |
[59,12] |
-2 |
dCas9-VP64 |
positive selection |
2402319 |
16099082 |
16099105 |
19 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
GTGTGTGTGTGTGTGTGTGATGG |
TPM4 |
ENSG00000167460 |
2.740144461675261 |
[44,53] |
[104,38] |
8 |
dCas9-VP64 |
positive selection |
2402732 |
16090343 |
16090366 |
19 |
- |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
TGGGAGGATCACTTGAGGCCAGG |
TPM4 |
ENSG00000167460 |
3.7396651611807004 |
[3,72] |
[11,226] |
9 |
dCas9-VP64 |
positive selection |
2451807 |
16080764 |
16080787 |
19 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
ATGCCATTGCACTCCAGCCTTGG |
TPM4 |
ENSG00000167460 |
2.033062228314259 |
[28,209] |
[4,221] |
7 |
dCas9-VP64 |
positive selection |
2456520 |
16087237 |
16087260 |
19 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
ACGCCACTGCACTCCAGCCTTGG |
TPM4 |
ENSG00000167460 |
0.6631647882125523 |
[138,30] |
[44,11] |
3 |
dCas9-VP64 |
positive selection |
2473816 |
16067306 |
16067329 |
19 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
GGTTAAAAATGGAAACAGCTAGG |
TPM4 |
ENSG00000167460 |
-0.8127016586296064 |
[102,56] |
[19,8] |
-7 |
dCas9-VP64 |
positive selection |
2497572 |
16067341 |
16067364 |
19 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
TCTTCCTTTAAGAAAATCCTAGG |
TPM4 |
ENSG00000167460 |
0.6850275053831393 |
[111,219] |
[57,113] |
5 |
dCas9-VP64 |
positive selection |
2497573 |
16067384 |
16067407 |
19 |
- |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
TGGCCAGCTCACCGTGCTCCCGG |
TPM4 |
ENSG00000167460 |
-0.742910885369887 |
[39,225] |
[13,35] |
-7 |
dCas9-VP64 |
positive selection |
2497574 |
16099082 |
16099105 |
19 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
GTGTGTGTGTGTGTGTGTGATGG |
TPM4 |
ENSG00000167460 |
-0.0021690128549880505 |
[109,77] |
[41,19] |
0 |
dCas9-VP64 |
positive selection |
2497987 |
16090343 |
16090366 |
19 |
- |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
TGGGAGGATCACTTGAGGCCAGG |
TPM4 |
ENSG00000167460 |
0.5989374680558959 |
[87,40] |
[52,11] |
4 |
dCas9-VP64 |
positive selection |
2547062 |
16080764 |
16080787 |
19 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
ATGCCATTGCACTCCAGCCTTGG |
TPM4 |
ENSG00000167460 |
0.2042793589460996 |
[254,297] |
[44,158] |
1 |
dCas9-VP64 |
positive selection |
2551775 |
16087237 |
16087260 |
19 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
ACGCCACTGCACTCCAGCCTTGG |
TPM4 |
ENSG00000167460 |
-0.07877572482445189 |
[107,69] |
[28,25] |
0 |
dCas9-VP64 |
positive selection |
2569071 |
16081939 |
16081962 |
19 |
- |
27453484 |
HT29 |
resistance to T3SS1-dependent cytotoxicity |
CCTCAACGAGCTGGATGCGTCGG |
TPM4 |
ENSG00000167460 |
-0.8226068485611983 |
[1,2] |
[0,0] |
-8 |
hSpCas9 |
positive selection |
3028774 |
16081955 |
16081978 |
19 |
+ |
27453484 |
HT29 |
resistance to T3SS1-dependent cytotoxicity |
CGTTGAGGAGGAGTTGGACAGGG |
TPM4 |
ENSG00000167460 |
-0.12030870574929861 |
[2,3] |
[4,0] |
-2 |
hSpCas9 |
positive selection |
3028775 |
16081939 |
16081962 |
19 |
- |
27453484 |
HT29 |
resistance to T3SS2-dependent cytotoxicity |
CCTCAACGAGCTGGATGCGTCGG |
TPM4 |
ENSG00000167460 |
-0.4733387692225042 |
[1,1] |
[0,0] |
-6 |
hSpCas9 |
positive selection |
3096632 |
16081955 |
16081978 |
19 |
+ |
27453484 |
HT29 |
resistance to T3SS2-dependent cytotoxicity |
CGTTGAGGAGGAGTTGGACAGGG |
TPM4 |
ENSG00000167460 |
0.8801797826676615 |
[2,2] |
[3,4] |
9 |
hSpCas9 |
positive selection |
3096633 |
16101256 |
16101279 |
|
+ |
24336571 |
A375 |
resistance to PLX after 7 days |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
-0.130370656301886 |
[9,17] |
[10,13] |
-4 |
hSpCas9 |
positive selection |
3152251 |
16081906 |
16081929 |
|
+ |
24336571 |
A375 |
resistance to PLX after 7 days |
TCCCCAGGCTGAAGGTGATGTGG |
TPM4 |
ENSG00000167460 |
0.008062569303807193 |
[9,13] |
[10,12] |
0 |
hSpCas9 |
positive selection |
3152253 |
16101256 |
16101279 |
|
+ |
24336571 |
A375 |
resistance to PLX after 14 days |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
-0.46181040805376916 |
[11,14] |
[4,2] |
-5 |
hSpCas9 |
positive selection |
3210044 |
16081906 |
16081929 |
|
+ |
24336571 |
A375 |
resistance to PLX after 14 days |
TCCCCAGGCTGAAGGTGATGTGG |
TPM4 |
ENSG00000167460 |
0.6678922618998162 |
[7,8] |
[5,4] |
6 |
hSpCas9 |
positive selection |
3210046 |
16101256 |
16101279 |
|
+ |
24336571 |
A375 |
viability after 7 days |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
0.0535466467228491 |
[13] |
[9,17] |
0 |
hSpCas9 |
negative selection |
3267837 |
16081906 |
16081929 |
|
+ |
24336571 |
A375 |
viability after 7 days |
TCCCCAGGCTGAAGGTGATGTGG |
TPM4 |
ENSG00000167460 |
0.5520720021567128 |
[7] |
[9,13] |
8 |
hSpCas9 |
negative selection |
3267839 |
16101256 |
16101279 |
|
+ |
24336571 |
A375 |
viability after 14 days |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
0.0031224360692220926 |
[13] |
[11,14] |
0 |
hSpCas9 |
negative selection |
3325630 |
16081906 |
16081929 |
|
+ |
24336571 |
A375 |
viability after 14 days |
TCCCCAGGCTGAAGGTGATGTGG |
TPM4 |
ENSG00000167460 |
0.060465112517926856 |
[7] |
[7,8] |
0 |
hSpCas9 |
negative selection |
3325632 |
16081906 |
16081929 |
19 |
+ |
27383988 |
293T |
resistance to West Nile virus (flavivirus) |
TCCCCAGGCTGAAGGTGATGTGG |
TPM4 |
ENSG00000167460 |
-0.10899600279998067 |
[164,164] |
[0,0] |
0 |
hSpCas9 |
positive selection |
3398698 |
16081939 |
16081962 |
19 |
- |
26780180 |
HT29 |
viability (Avana library 4 designs) |
CCTCAACGAGCTGGATGCGTCGG |
TPM4 |
ENSG00000167460 |
2.48190358726533 |
[] |
[] |
8 |
hSpCas9 |
negative selection |
3467610 |
16081954 |
16081977 |
19 |
+ |
26780180 |
HT29 |
viability (Avana library 4 designs) |
CGTTGAGGAGGAGTTGGACAGGG |
TPM4 |
ENSG00000167460 |
1.95370665204368 |
[] |
[] |
7 |
hSpCas9 |
negative selection |
3467611 |
16081939 |
16081962 |
19 |
- |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
CCTCAACGAGCTGGATGCGTCGG |
TPM4 |
ENSG00000167460 |
-3.72748039039723 |
[] |
[] |
-4 |
hSpCas9 |
negative selection |
3571870 |
16081954 |
16081977 |
19 |
+ |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
CGTTGAGGAGGAGTTGGACAGGG |
TPM4 |
ENSG00000167460 |
-2.09006435438636 |
[] |
[] |
-3 |
hSpCas9 |
negative selection |
3571871 |
16081975 |
16081998 |
19 |
+ |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
GGCTCAGGAACGACTGGCCACGG |
TPM4 |
ENSG00000167460 |
5.33482775348188 |
[] |
[] |
8 |
hSpCas9 |
negative selection |
3571872 |
16081939 |
16081962 |
19 |
- |
26780180 |
A375 |
viability (Avana lentiGuide) |
CCTCAACGAGCTGGATGCGTCGG |
TPM4 |
ENSG00000167460 |
23.2233708133765 |
[] |
[] |
9 |
hSpCas9 |
negative selection |
3680529 |
16081954 |
16081977 |
19 |
+ |
26780180 |
A375 |
viability (Avana lentiGuide) |
CGTTGAGGAGGAGTTGGACAGGG |
TPM4 |
ENSG00000167460 |
7.86073989452534 |
[] |
[] |
6 |
hSpCas9 |
negative selection |
3680530 |
16081975 |
16081998 |
19 |
+ |
26780180 |
A375 |
viability (Avana lentiGuide) |
GGCTCAGGAACGACTGGCCACGG |
TPM4 |
ENSG00000167460 |
4.04978894130138 |
[] |
[] |
4 |
hSpCas9 |
negative selection |
3680531 |
16081939 |
16081962 |
19 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
CCTCAACGAGCTGGATGCGTCGG |
TPM4 |
ENSG00000167460 |
-1.7431374449448012 |
[4] |
[1,0] |
-9 |
hSpCas9 |
positive selection |
3789136 |
16081954 |
16081977 |
19 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
CGTTGAGGAGGAGTTGGACAGGG |
TPM4 |
ENSG00000167460 |
-0.19055858952236185 |
[4] |
[3,3] |
-3 |
hSpCas9 |
positive selection |
3789137 |
16081975 |
16081998 |
19 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
GGCTCAGGAACGACTGGCCACGG |
TPM4 |
ENSG00000167460 |
0.3152574617561804 |
[4] |
[5,5] |
8 |
hSpCas9 |
positive selection |
3789138 |
16081939 |
16081962 |
19 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
CCTCAACGAGCTGGATGCGTCGG |
TPM4 |
ENSG00000167460 |
-1.7263714470914617 |
[4] |
[0,0] |
-9 |
hSpCas9 |
positive selection |
3897743 |
16081954 |
16081977 |
19 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
CGTTGAGGAGGAGTTGGACAGGG |
TPM4 |
ENSG00000167460 |
-0.7637421934989036 |
[5] |
[1,2] |
-7 |
hSpCas9 |
positive selection |
3897744 |
16081975 |
16081998 |
19 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
GGCTCAGGAACGACTGGCCACGG |
TPM4 |
ENSG00000167460 |
0.20234150769766202 |
[5] |
[4,4] |
5 |
hSpCas9 |
positive selection |
3897745 |
16101256 |
16101279 |
19 |
+ |
26780180 |
A375 |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
1.44683980533257 |
[] |
[] |
8 |
hSpCas9 |
negative selection |
4007065 |
16081906 |
16081929 |
19 |
+ |
26780180 |
A375 |
viability |
TCCCCAGGCTGAAGGTGATGTGG |
TPM4 |
ENSG00000167460 |
1.30983990530254 |
[] |
[] |
7 |
hSpCas9 |
negative selection |
4007066 |
16101256 |
16101279 |
19 |
+ |
26780180 |
HT29 |
viability (GeCKOv2 library) |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
1.18830433168848 |
[] |
[] |
6 |
hSpCas9 |
negative selection |
4115031 |
16081906 |
16081929 |
19 |
+ |
26780180 |
HT29 |
viability (GeCKOv2 library) |
TCCCCAGGCTGAAGGTGATGTGG |
TPM4 |
ENSG00000167460 |
0.874153705276422 |
[] |
[] |
3 |
hSpCas9 |
negative selection |
4115032 |
16101256 |
16101279 |
19 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiCRISPRv1) |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
-0.28828573367546323 |
[3] |
[1,1] |
-6 |
hSpCas9 |
positive selection |
4178791 |
16081906 |
16081929 |
19 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiCRISPRv1) |
TCCCCAGGCTGAAGGTGATGTGG |
TPM4 |
ENSG00000167460 |
-0.037116574084657676 |
[3] |
[1,2] |
-1 |
hSpCas9 |
positive selection |
4178794 |
16101256 |
16101279 |
19 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiGuide) |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
0.9663540411041909 |
[2] |
[5,3,4,0] |
6 |
hSpCas9 |
positive selection |
4242813 |
16081906 |
16081929 |
19 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiGuide) |
TCCCCAGGCTGAAGGTGATGTGG |
TPM4 |
ENSG00000167460 |
1.0409797648590082 |
[1] |
[1,2,4,0] |
7 |
hSpCas9 |
positive selection |
4242816 |
16101256 |
16101279 |
19 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
-0.20194537498581225 |
[2] |
[3,0] |
-4 |
hSpCas9 |
positive selection |
4304773 |
16093728 |
16093751 |
19 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
GGAAAAGACAATTGATGACCTGG |
TPM4 |
ENSG00000167460 |
-0.7674267497060779 |
[1] |
[0,0] |
-9 |
hSpCas9 |
positive selection |
4369018 |
16081906 |
16081929 |
19 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
TCCCCAGGCTGAAGGTGATGTGG |
TPM4 |
ENSG00000167460 |
0.17797900182523982 |
[3] |
[2,2] |
3 |
hSpCas9 |
positive selection |
4369022 |
16081939 |
16081961 |
19 |
- |
27760321 |
OCIAML3 |
viability |
CTCAACGAGCTGGATGCGTCGG |
TPM4 |
ENSG00000167460 |
-1.3605830386714262 |
[631,562] |
[136,239] |
-8 |
hSpCas9 |
negative selection |
4449501 |
16081976 |
16081998 |
19 |
+ |
27760321 |
OCIAML3 |
viability |
GCTCAGGAACGACTGGCCACGG |
TPM4 |
ENSG00000167460 |
0.3643494700209215 |
[461,321] |
[331,465] |
4 |
hSpCas9 |
negative selection |
4449502 |
16086412 |
16086434 |
19 |
+ |
27760321 |
OCIAML3 |
viability |
GCTCCTTGCAGAGGAATGAAGG |
TPM4 |
ENSG00000167460 |
0.04611102537526811 |
[417,373] |
[324,311] |
0 |
hSpCas9 |
negative selection |
4449503 |
16086517 |
16086539 |
19 |
+ |
27760321 |
OCIAML3 |
viability |
GAGGCTGACCGCAAATACGAGG |
TPM4 |
ENSG00000167460 |
0.6902839748005695 |
[334,272] |
[349,422] |
7 |
hSpCas9 |
negative selection |
4449504 |
16089040 |
16089062 |
19 |
+ |
27760321 |
OCIAML3 |
viability |
TGCAGAAAATGTGGTGACCTGG |
TPM4 |
ENSG00000167460 |
-0.006179008742978463 |
[524,393] |
[323,394] |
0 |
hSpCas9 |
negative selection |
4449505 |
16081939 |
16081961 |
19 |
- |
27760321 |
OCIAML2 |
viability |
CTCAACGAGCTGGATGCGTCGG |
TPM4 |
ENSG00000167460 |
-0.5896590913120598 |
[631,562] |
[277,376] |
-6 |
hSpCas9 |
negative selection |
4532964 |
16081976 |
16081998 |
19 |
+ |
27760321 |
OCIAML2 |
viability |
GCTCAGGAACGACTGGCCACGG |
TPM4 |
ENSG00000167460 |
0.8658130023726749 |
[461,321] |
[544,605] |
9 |
hSpCas9 |
negative selection |
4532965 |
16086412 |
16086434 |
19 |
+ |
27760321 |
OCIAML2 |
viability |
GCTCCTTGCAGAGGAATGAAGG |
TPM4 |
ENSG00000167460 |
0.5967213913439744 |
[417,373] |
[340,671] |
7 |
hSpCas9 |
negative selection |
4532966 |
16086517 |
16086539 |
19 |
+ |
27760321 |
OCIAML2 |
viability |
GAGGCTGACCGCAAATACGAGG |
TPM4 |
ENSG00000167460 |
0.42438688304024696 |
[334,272] |
[276,395] |
6 |
hSpCas9 |
negative selection |
4532967 |
16089040 |
16089062 |
19 |
+ |
27760321 |
OCIAML2 |
viability |
TGCAGAAAATGTGGTGACCTGG |
TPM4 |
ENSG00000167460 |
-0.1465112335418863 |
[524,393] |
[291,386] |
-2 |
hSpCas9 |
negative selection |
4532968 |
16081939 |
16081961 |
19 |
- |
27760321 |
MV411 |
viability |
CTCAACGAGCTGGATGCGTCGG |
TPM4 |
ENSG00000167460 |
-0.8084248771839123 |
[631,562] |
[0,560] |
-5 |
hSpCas9 |
negative selection |
4616427 |
16081976 |
16081998 |
19 |
+ |
27760321 |
MV411 |
viability |
GCTCAGGAACGACTGGCCACGG |
TPM4 |
ENSG00000167460 |
0.8565940575114628 |
[461,321] |
[319,677] |
6 |
hSpCas9 |
negative selection |
4616428 |
16086412 |
16086434 |
19 |
+ |
27760321 |
MV411 |
viability |
GCTCCTTGCAGAGGAATGAAGG |
TPM4 |
ENSG00000167460 |
-1.0102606631945719 |
[417,373] |
[91,185] |
-6 |
hSpCas9 |
negative selection |
4616429 |
16086517 |
16086539 |
19 |
+ |
27760321 |
MV411 |
viability |
GAGGCTGACCGCAAATACGAGG |
TPM4 |
ENSG00000167460 |
0.2947889316410495 |
[334,272] |
[289,176] |
2 |
hSpCas9 |
negative selection |
4616430 |
16089040 |
16089062 |
19 |
+ |
27760321 |
MV411 |
viability |
TGCAGAAAATGTGGTGACCTGG |
TPM4 |
ENSG00000167460 |
-0.6259448357499311 |
[524,393] |
[235,132] |
-4 |
hSpCas9 |
negative selection |
4616431 |
16081939 |
16081961 |
19 |
- |
27760321 |
HL60 |
viability |
CTCAACGAGCTGGATGCGTCGG |
TPM4 |
ENSG00000167460 |
-0.7511837907485198 |
[631,562] |
[307,269] |
-7 |
hSpCas9 |
negative selection |
4699890 |
16081976 |
16081998 |
19 |
+ |
27760321 |
HL60 |
viability |
GCTCAGGAACGACTGGCCACGG |
TPM4 |
ENSG00000167460 |
1.119858310517806 |
[461,321] |
[604,775] |
9 |
hSpCas9 |
negative selection |
4699891 |
16086412 |
16086434 |
19 |
+ |
27760321 |
HL60 |
viability |
GCTCCTTGCAGAGGAATGAAGG |
TPM4 |
ENSG00000167460 |
1.1780137113974973 |
[417,373] |
[531,941] |
9 |
hSpCas9 |
negative selection |
4699892 |
16086517 |
16086539 |
19 |
+ |
27760321 |
HL60 |
viability |
GAGGCTGACCGCAAATACGAGG |
TPM4 |
ENSG00000167460 |
0.2796141146720752 |
[334,272] |
[213,390] |
3 |
hSpCas9 |
negative selection |
4699893 |
16089040 |
16089062 |
19 |
+ |
27760321 |
HL60 |
viability |
TGCAGAAAATGTGGTGACCTGG |
TPM4 |
ENSG00000167460 |
0.12461497402365765 |
[524,393] |
[447,360] |
1 |
hSpCas9 |
negative selection |
4699894 |
16081939 |
16081961 |
19 |
- |
27760321 |
HT1080 |
viability |
CTCAACGAGCTGGATGCGTCGG |
TPM4 |
ENSG00000167460 |
0.1281469310908328 |
[562,439] |
[109,336] |
0 |
hSpCas9 |
negative selection |
4783353 |
16081976 |
16081998 |
19 |
+ |
27760321 |
HT1080 |
viability |
GCTCAGGAACGACTGGCCACGG |
TPM4 |
ENSG00000167460 |
2.2537652718097263 |
[321,250] |
[855,202] |
9 |
hSpCas9 |
negative selection |
4783354 |
16086412 |
16086434 |
19 |
+ |
27760321 |
HT1080 |
viability |
GCTCCTTGCAGAGGAATGAAGG |
TPM4 |
ENSG00000167460 |
0.10472262570926588 |
[373,291] |
[71,219] |
0 |
hSpCas9 |
negative selection |
4783355 |
16086517 |
16086539 |
19 |
+ |
27760321 |
HT1080 |
viability |
GAGGCTGACCGCAAATACGAGG |
TPM4 |
ENSG00000167460 |
-0.5481626845312312 |
[272,212] |
[80,49] |
-2 |
hSpCas9 |
negative selection |
4783356 |
16089040 |
16089062 |
19 |
+ |
27760321 |
HT1080 |
viability |
TGCAGAAAATGTGGTGACCTGG |
TPM4 |
ENSG00000167460 |
0.08979241994476467 |
[393,307] |
[123,175] |
0 |
hSpCas9 |
negative selection |
4783357 |
16081939 |
16081961 |
19 |
- |
27760321 |
HT29 |
viability after 7 days |
CTCAACGAGCTGGATGCGTCGG |
TPM4 |
ENSG00000167460 |
0.04383079516022964 |
[562,439] |
[819,518,675] |
0 |
hSpCas9 |
negative selection |
4866816 |
16081976 |
16081998 |
19 |
+ |
27760321 |
HT29 |
viability after 7 days |
GCTCAGGAACGACTGGCCACGG |
TPM4 |
ENSG00000167460 |
1.3136574848996971 |
[321,250] |
[1142,789,846] |
9 |
hSpCas9 |
negative selection |
4866817 |
16086412 |
16086434 |
19 |
+ |
27760321 |
HT29 |
viability after 7 days |
GCTCCTTGCAGAGGAATGAAGG |
TPM4 |
ENSG00000167460 |
-0.15013155580363324 |
[373,291] |
[417,435,309] |
-2 |
hSpCas9 |
negative selection |
4866818 |
16086517 |
16086539 |
19 |
+ |
27760321 |
HT29 |
viability after 7 days |
GAGGCTGACCGCAAATACGAGG |
TPM4 |
ENSG00000167460 |
-0.16046763281792187 |
[272,212] |
[383,122,343] |
-2 |
hSpCas9 |
negative selection |
4866819 |
16089040 |
16089062 |
19 |
+ |
27760321 |
HT29 |
viability after 7 days |
TGCAGAAAATGTGGTGACCTGG |
TPM4 |
ENSG00000167460 |
0.386219315356396 |
[393,307] |
[545,546,666] |
6 |
hSpCas9 |
negative selection |
4866820 |
16081939 |
16081961 |
19 |
- |
27760321 |
HT29 |
viability after 25 days |
CTCAACGAGCTGGATGCGTCGG |
TPM4 |
ENSG00000167460 |
-0.6968477609824221 |
[562,439] |
[355,273,438] |
-5 |
hSpCas9 |
negative selection |
4950279 |
16081976 |
16081998 |
19 |
+ |
27760321 |
HT29 |
viability after 25 days |
GCTCAGGAACGACTGGCCACGG |
TPM4 |
ENSG00000167460 |
1.2647402012332156 |
[321,250] |
[809,737,811] |
9 |
hSpCas9 |
negative selection |
4950280 |
16086412 |
16086434 |
19 |
+ |
27760321 |
HT29 |
viability after 25 days |
GCTCCTTGCAGAGGAATGAAGG |
TPM4 |
ENSG00000167460 |
0.053865086190247685 |
[373,291] |
[314,294,600] |
0 |
hSpCas9 |
negative selection |
4950281 |
16086517 |
16086539 |
19 |
+ |
27760321 |
HT29 |
viability after 25 days |
GAGGCTGACCGCAAATACGAGG |
TPM4 |
ENSG00000167460 |
0.3525140898143412 |
[272,212] |
[255,392,427] |
4 |
hSpCas9 |
negative selection |
4950282 |
16089040 |
16089062 |
19 |
+ |
27760321 |
HT29 |
viability after 25 days |
TGCAGAAAATGTGGTGACCTGG |
TPM4 |
ENSG00000167460 |
0.7905688869789529 |
[393,307] |
[566,678,859] |
8 |
hSpCas9 |
negative selection |
4950283 |
16081939 |
16081961 |
19 |
- |
27760321 |
HT29 |
viability after 22 days |
CTCAACGAGCTGGATGCGTCGG |
TPM4 |
ENSG00000167460 |
-0.6961386660806793 |
[562,439] |
[474,177,417] |
-5 |
hSpCas9 |
negative selection |
5033742 |
16081976 |
16081998 |
19 |
+ |
27760321 |
HT29 |
viability after 22 days |
GCTCAGGAACGACTGGCCACGG |
TPM4 |
ENSG00000167460 |
1.044808153757268 |
[321,250] |
[819,757,465] |
9 |
hSpCas9 |
negative selection |
5033743 |
16086412 |
16086434 |
19 |
+ |
27760321 |
HT29 |
viability after 22 days |
GCTCCTTGCAGAGGAATGAAGG |
TPM4 |
ENSG00000167460 |
0.18731103976235208 |
[373,291] |
[419,301,594] |
2 |
hSpCas9 |
negative selection |
5033744 |
16086517 |
16086539 |
19 |
+ |
27760321 |
HT29 |
viability after 22 days |
GAGGCTGACCGCAAATACGAGG |
TPM4 |
ENSG00000167460 |
0.1455726588233246 |
[272,212] |
[309,334,286] |
1 |
hSpCas9 |
negative selection |
5033745 |
16089040 |
16089062 |
19 |
+ |
27760321 |
HT29 |
viability after 22 days |
TGCAGAAAATGTGGTGACCTGG |
TPM4 |
ENSG00000167460 |
0.7463972646277282 |
[393,307] |
[854,359,823] |
8 |
hSpCas9 |
negative selection |
5033746 |
16081939 |
16081961 |
19 |
- |
27760321 |
HT29 |
viability after 19 days |
CTCAACGAGCTGGATGCGTCGG |
TPM4 |
ENSG00000167460 |
-0.32836727114037645 |
[562,439] |
[437,225,694] |
-3 |
hSpCas9 |
negative selection |
5117205 |
16081976 |
16081998 |
19 |
+ |
27760321 |
HT29 |
viability after 19 days |
GCTCAGGAACGACTGGCCACGG |
TPM4 |
ENSG00000167460 |
0.6743282775586792 |
[321,250] |
[792,400,406] |
7 |
hSpCas9 |
negative selection |
5117206 |
16086412 |
16086434 |
19 |
+ |
27760321 |
HT29 |
viability after 19 days |
GCTCCTTGCAGAGGAATGAAGG |
TPM4 |
ENSG00000167460 |
0.014411419067933987 |
[373,291] |
[180,527,421] |
0 |
hSpCas9 |
negative selection |
5117207 |
16086517 |
16086539 |
19 |
+ |
27760321 |
HT29 |
viability after 19 days |
GAGGCTGACCGCAAATACGAGG |
TPM4 |
ENSG00000167460 |
-0.04088840622546264 |
[272,212] |
[249,337,221] |
0 |
hSpCas9 |
negative selection |
5117208 |
16089040 |
16089062 |
19 |
+ |
27760321 |
HT29 |
viability after 19 days |
TGCAGAAAATGTGGTGACCTGG |
TPM4 |
ENSG00000167460 |
1.12532499988352 |
[393,307] |
[755,1054,805] |
9 |
hSpCas9 |
negative selection |
5117209 |
16081939 |
16081961 |
19 |
- |
27760321 |
HT29 |
viability after 16 days |
CTCAACGAGCTGGATGCGTCGG |
TPM4 |
ENSG00000167460 |
-0.700210761718014 |
[562,439] |
[422,282,338] |
-6 |
hSpCas9 |
negative selection |
5200668 |
16081976 |
16081998 |
19 |
+ |
27760321 |
HT29 |
viability after 16 days |
GCTCAGGAACGACTGGCCACGG |
TPM4 |
ENSG00000167460 |
1.4003089483909843 |
[321,250] |
[862,827,848] |
9 |
hSpCas9 |
negative selection |
5200669 |
16086412 |
16086434 |
19 |
+ |
27760321 |
HT29 |
viability after 16 days |
GCTCCTTGCAGAGGAATGAAGG |
TPM4 |
ENSG00000167460 |
0.3818320895288489 |
[373,291] |
[402,657,382] |
4 |
hSpCas9 |
negative selection |
5200670 |
16086517 |
16086539 |
19 |
+ |
27760321 |
HT29 |
viability after 16 days |
GAGGCTGACCGCAAATACGAGG |
TPM4 |
ENSG00000167460 |
0.10762093664787664 |
[272,212] |
[158,256,450] |
1 |
hSpCas9 |
negative selection |
5200671 |
16089040 |
16089062 |
19 |
+ |
27760321 |
HT29 |
viability after 16 days |
TGCAGAAAATGTGGTGACCTGG |
TPM4 |
ENSG00000167460 |
0.26390171333404866 |
[393,307] |
[419,385,605] |
3 |
hSpCas9 |
negative selection |
5200672 |
16081939 |
16081961 |
19 |
- |
27760321 |
HT29 |
viability after 13 days |
CTCAACGAGCTGGATGCGTCGG |
TPM4 |
ENSG00000167460 |
-1.3415450226682326 |
[562,439] |
[139,217,324] |
-8 |
hSpCas9 |
negative selection |
5284131 |
16081976 |
16081998 |
19 |
+ |
27760321 |
HT29 |
viability after 13 days |
GCTCAGGAACGACTGGCCACGG |
TPM4 |
ENSG00000167460 |
0.8781912720768075 |
[321,250] |
[584,592,651] |
9 |
hSpCas9 |
negative selection |
5284132 |
16086412 |
16086434 |
19 |
+ |
27760321 |
HT29 |
viability after 13 days |
GCTCCTTGCAGAGGAATGAAGG |
TPM4 |
ENSG00000167460 |
-0.13619042547511573 |
[373,291] |
[467,315,274] |
-2 |
hSpCas9 |
negative selection |
5284133 |
16086517 |
16086539 |
19 |
+ |
27760321 |
HT29 |
viability after 13 days |
GAGGCTGACCGCAAATACGAGG |
TPM4 |
ENSG00000167460 |
0.053841809144230535 |
[272,212] |
[359,196,318] |
0 |
hSpCas9 |
negative selection |
5284134 |
16089040 |
16089062 |
19 |
+ |
27760321 |
HT29 |
viability after 13 days |
TGCAGAAAATGTGGTGACCTGG |
TPM4 |
ENSG00000167460 |
0.41897194914013147 |
[393,307] |
[580,435,611] |
5 |
hSpCas9 |
negative selection |
5284135 |
16081939 |
16081961 |
19 |
- |
27760321 |
HT29 |
viability after 10 days |
CTCAACGAGCTGGATGCGTCGG |
TPM4 |
ENSG00000167460 |
-1.4126000729301678 |
[562,439] |
[267,247,190] |
-8 |
hSpCas9 |
negative selection |
5367594 |
16081976 |
16081998 |
19 |
+ |
27760321 |
HT29 |
viability after 10 days |
GCTCAGGAACGACTGGCCACGG |
TPM4 |
ENSG00000167460 |
1.006412043778235 |
[321,250] |
[634,724,793] |
9 |
hSpCas9 |
negative selection |
5367595 |
16086412 |
16086434 |
19 |
+ |
27760321 |
HT29 |
viability after 10 days |
GCTCCTTGCAGAGGAATGAAGG |
TPM4 |
ENSG00000167460 |
-0.041483805332204624 |
[373,291] |
[407,423,380] |
0 |
hSpCas9 |
negative selection |
5367596 |
16086517 |
16086539 |
19 |
+ |
27760321 |
HT29 |
viability after 10 days |
GAGGCTGACCGCAAATACGAGG |
TPM4 |
ENSG00000167460 |
0.29368814821591577 |
[272,212] |
[415,359,339] |
4 |
hSpCas9 |
negative selection |
5367597 |
16089040 |
16089062 |
19 |
+ |
27760321 |
HT29 |
viability after 10 days |
TGCAGAAAATGTGGTGACCTGG |
TPM4 |
ENSG00000167460 |
0.5078262764057806 |
[393,307] |
[519,538,803] |
7 |
hSpCas9 |
negative selection |
5367598 |
16081939 |
16081961 |
19 |
- |
27760321 |
MOLM13 |
viability |
CTCAACGAGCTGGATGCGTCGG |
TPM4 |
ENSG00000167460 |
-4.3362379560222175 |
[631,562] |
[0,29] |
-9 |
hSpCas9 |
negative selection |
5451057 |
16081976 |
16081998 |
19 |
+ |
27760321 |
MOLM13 |
viability |
GCTCAGGAACGACTGGCCACGG |
TPM4 |
ENSG00000167460 |
1.8016136334974218 |
[461,321] |
[1128,449] |
9 |
hSpCas9 |
negative selection |
5451058 |
16086412 |
16086434 |
19 |
+ |
27760321 |
MOLM13 |
viability |
GCTCCTTGCAGAGGAATGAAGG |
TPM4 |
ENSG00000167460 |
0.5056645041135128 |
[417,373] |
[305,325] |
3 |
hSpCas9 |
negative selection |
5451059 |
16086517 |
16086539 |
19 |
+ |
27760321 |
MOLM13 |
viability |
GAGGCTGACCGCAAATACGAGG |
TPM4 |
ENSG00000167460 |
-0.2665369624733297 |
[334,272] |
[284,19] |
-2 |
hSpCas9 |
negative selection |
5451060 |
16089040 |
16089062 |
19 |
+ |
27760321 |
MOLM13 |
viability |
TGCAGAAAATGTGGTGACCTGG |
TPM4 |
ENSG00000167460 |
-0.6751999596065246 |
[524,393] |
[140,177] |
-4 |
hSpCas9 |
negative selection |
5451061 |
16067824 |
16067847 |
19 |
+ |
27661255 |
K562 |
viability |
GCAGACACCTGCGGGAGGATAGG |
TPM4 |
ENSG00000167460 |
0.14184883827348327 |
[495,643] |
[526,476] |
5 |
dCas9-KRAB |
negative selection |
5519307 |
16067827 |
16067850 |
19 |
+ |
27661255 |
K562 |
viability |
GACACCTGCGGGAGGATAGGAGG |
TPM4 |
ENSG00000167460 |
0.14236847810124864 |
[734,843] |
[689,697] |
5 |
dCas9-KRAB |
negative selection |
5519308 |
16067909 |
16067932 |
19 |
+ |
27661255 |
K562 |
viability |
GCTGGAAGAGGGGTGACGATCGG |
TPM4 |
ENSG00000167460 |
-0.19858969969610984 |
[252,164] |
[158,135] |
-6 |
dCas9-KRAB |
negative selection |
5519309 |
16067575 |
16067598 |
19 |
- |
27661255 |
K562 |
viability |
GGTGCGCGGCGGGCTCTGTGGGG |
TPM4 |
ENSG00000167460 |
0.3259635356842477 |
[560,676] |
[641,596] |
9 |
dCas9-KRAB |
negative selection |
5519310 |
16067597 |
16067620 |
19 |
- |
27661255 |
K562 |
viability |
GGCGCTGGCGTGGGGGACGTGGG |
TPM4 |
ENSG00000167460 |
0.0002194019500476735 |
[839,767] |
[624,658] |
0 |
dCas9-KRAB |
negative selection |
5519311 |
16067747 |
16067770 |
19 |
- |
27661255 |
K562 |
viability |
GCCCGGAGCGGCCCAGCGGAGGG |
TPM4 |
ENSG00000167460 |
0.02093385088877331 |
[392,560] |
[361,402] |
0 |
dCas9-KRAB |
negative selection |
5519312 |
16067810 |
16067833 |
19 |
- |
27661255 |
K562 |
viability |
GGTGTCTGCGACCCCCAACTGGG |
TPM4 |
ENSG00000167460 |
0.3726085965339654 |
[72,160] |
[127,111] |
9 |
dCas9-KRAB |
negative selection |
5519313 |
16101256 |
16101279 |
19 |
+ |
27260156 |
BXPC3 |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
0.24126204667459009 |
[409] |
[505,477,464,584] |
5 |
hSpCas9 |
negative selection |
5577233 |
16093728 |
16093751 |
19 |
+ |
27260156 |
BXPC3 |
viability |
GGAAAAGACAATTGATGACCTGG |
TPM4 |
ENSG00000167460 |
-1.2587269242390005 |
[140] |
[42,62,74,67] |
-9 |
hSpCas9 |
negative selection |
5641478 |
16081906 |
16081929 |
19 |
+ |
27260156 |
BXPC3 |
viability |
TCCCCAGGCTGAAGGTGATGTGG |
TPM4 |
ENSG00000167460 |
-0.25142369878176807 |
[482] |
[307,381,559,466] |
-5 |
hSpCas9 |
negative selection |
5641482 |
16101256 |
16101279 |
19 |
+ |
27260156 |
A673 |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
0.4675241997192541 |
[409] |
[746,617,666,699] |
9 |
hSpCas9 |
negative selection |
5698484 |
16093728 |
16093751 |
19 |
+ |
27260156 |
A673 |
viability |
GGAAAAGACAATTGATGACCTGG |
TPM4 |
ENSG00000167460 |
-1.1371087064793508 |
[140] |
[86,37,87,97] |
-9 |
hSpCas9 |
negative selection |
5762729 |
16081906 |
16081929 |
19 |
+ |
27260156 |
A673 |
viability |
TCCCCAGGCTGAAGGTGATGTGG |
TPM4 |
ENSG00000167460 |
-0.011171445840481527 |
[482] |
[643,496,572,597] |
0 |
hSpCas9 |
negative selection |
5762733 |
16101256 |
16101279 |
19 |
+ |
27260156 |
A375 |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
0.3211588054443303 |
[409] |
[469,633,638,645] |
5 |
hSpCas9 |
negative selection |
5819735 |
16093728 |
16093751 |
19 |
+ |
27260156 |
A375 |
viability |
GGAAAAGACAATTGATGACCTGG |
TPM4 |
ENSG00000167460 |
-2.2181553327171306 |
[140] |
[58,51,25,9] |
-9 |
hSpCas9 |
negative selection |
5883980 |
16081906 |
16081929 |
19 |
+ |
27260156 |
A375 |
viability |
TCCCCAGGCTGAAGGTGATGTGG |
TPM4 |
ENSG00000167460 |
-0.5980847081776688 |
[482] |
[206,463,375,444] |
-7 |
hSpCas9 |
negative selection |
5883984 |
16101256 |
16101279 |
19 |
+ |
27260156 |
COLO741 |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
0.1711299735411091 |
[409] |
[626,731,424] |
3 |
hSpCas9 |
negative selection |
5940986 |
16093728 |
16093751 |
19 |
+ |
27260156 |
COLO741 |
viability |
GGAAAAGACAATTGATGACCTGG |
TPM4 |
ENSG00000167460 |
-0.6656797593469339 |
[140] |
[61,157,115] |
-8 |
hSpCas9 |
negative selection |
6005231 |
16081906 |
16081929 |
19 |
+ |
27260156 |
COLO741 |
viability |
TCCCCAGGCTGAAGGTGATGTGG |
TPM4 |
ENSG00000167460 |
-0.21409171375850986 |
[482] |
[594,457,545] |
-4 |
hSpCas9 |
negative selection |
6005235 |
16101256 |
16101279 |
19 |
+ |
27260156 |
CAL120 |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
0.6798612974156143 |
[409] |
[1108,650,736] |
8 |
hSpCas9 |
negative selection |
6062237 |
16093728 |
16093751 |
19 |
+ |
27260156 |
CAL120 |
viability |
GGAAAAGACAATTGATGACCTGG |
TPM4 |
ENSG00000167460 |
-2.2127994058449456 |
[140] |
[54,16,43] |
-9 |
hSpCas9 |
negative selection |
6126482 |
16081906 |
16081929 |
19 |
+ |
27260156 |
CAL120 |
viability |
TCCCCAGGCTGAAGGTGATGTGG |
TPM4 |
ENSG00000167460 |
-0.1949572296086236 |
[482] |
[703,489,409] |
-3 |
hSpCas9 |
negative selection |
6126486 |
16101256 |
16101279 |
19 |
+ |
27260156 |
CADOES1 |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
0.11083886689255901 |
[409] |
[358,368,484,434] |
2 |
hSpCas9 |
negative selection |
6183488 |
16093728 |
16093751 |
19 |
+ |
27260156 |
CADOES1 |
viability |
GGAAAAGACAATTGATGACCTGG |
TPM4 |
ENSG00000167460 |
-1.1912857191569264 |
[140] |
[74,11,73,68] |
-9 |
hSpCas9 |
negative selection |
6247733 |
16081906 |
16081929 |
19 |
+ |
27260156 |
CADOES1 |
viability |
TCCCCAGGCTGAAGGTGATGTGG |
TPM4 |
ENSG00000167460 |
-0.19134537308736996 |
[482] |
[414,365,489,298] |
-3 |
hSpCas9 |
negative selection |
6247737 |
16101256 |
16101279 |
19 |
+ |
27260156 |
EWS502 |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
0.026321163495692107 |
[409] |
[545,407,341,459] |
0 |
hSpCas9 |
negative selection |
6304739 |
16093728 |
16093751 |
19 |
+ |
27260156 |
EWS502 |
viability |
GGAAAAGACAATTGATGACCTGG |
TPM4 |
ENSG00000167460 |
-1.5015390653689382 |
[140] |
[11,34,90,80] |
-9 |
hSpCas9 |
negative selection |
6368984 |
16081906 |
16081929 |
19 |
+ |
27260156 |
EWS502 |
viability |
TCCCCAGGCTGAAGGTGATGTGG |
TPM4 |
ENSG00000167460 |
-0.056268815250888976 |
[482] |
[383,606,371,618] |
-1 |
hSpCas9 |
negative selection |
6368988 |
16101256 |
16101279 |
19 |
+ |
27260156 |
EW8 |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
0.13334997494262454 |
[409] |
[467,279,260,475] |
2 |
hSpCas9 |
negative selection |
6425990 |
16093728 |
16093751 |
19 |
+ |
27260156 |
EW8 |
viability |
GGAAAAGACAATTGATGACCTGG |
TPM4 |
ENSG00000167460 |
-2.1657291494901525 |
[140] |
[37,9,31,21] |
-9 |
hSpCas9 |
negative selection |
6490235 |
16081906 |
16081929 |
19 |
+ |
27260156 |
EW8 |
viability |
TCCCCAGGCTGAAGGTGATGTGG |
TPM4 |
ENSG00000167460 |
-0.27866767076671783 |
[482] |
[376,299,314,304] |
-5 |
hSpCas9 |
negative selection |
6490239 |
16101256 |
16101279 |
19 |
+ |
27260156 |
CORL105 |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
0.08608913012020519 |
[409] |
[374,432,641,604] |
1 |
hSpCas9 |
negative selection |
6547241 |
16093728 |
16093751 |
19 |
+ |
27260156 |
CORL105 |
viability |
GGAAAAGACAATTGATGACCTGG |
TPM4 |
ENSG00000167460 |
-0.8452332189784475 |
[140] |
[32,158,71,96] |
-9 |
hSpCas9 |
negative selection |
6611486 |
16081906 |
16081929 |
19 |
+ |
27260156 |
CORL105 |
viability |
TCCCCAGGCTGAAGGTGATGTGG |
TPM4 |
ENSG00000167460 |
-0.3927547581467978 |
[482] |
[357,413,542,422] |
-6 |
hSpCas9 |
negative selection |
6611490 |
16101256 |
16101279 |
19 |
+ |
27260156 |
HS294T |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
0.02159184790360319 |
[409] |
[133,158,155,203] |
0 |
hSpCas9 |
negative selection |
6668492 |
16093728 |
16093751 |
19 |
+ |
27260156 |
HS294T |
viability |
GGAAAAGACAATTGATGACCTGG |
TPM4 |
ENSG00000167460 |
-2.4358997643080054 |
[140] |
[6,1,15,16] |
-9 |
hSpCas9 |
negative selection |
6732737 |
16081906 |
16081929 |
19 |
+ |
27260156 |
HS294T |
viability |
TCCCCAGGCTGAAGGTGATGTGG |
TPM4 |
ENSG00000167460 |
-0.09034810684446384 |
[482] |
[128,185,170,227] |
-1 |
hSpCas9 |
negative selection |
6732741 |
16101256 |
16101279 |
19 |
+ |
27260156 |
HCC44 |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
0.25730898186454537 |
[409] |
[723,374,794,405] |
4 |
hSpCas9 |
negative selection |
6789743 |
16093728 |
16093751 |
19 |
+ |
27260156 |
HCC44 |
viability |
GGAAAAGACAATTGATGACCTGG |
TPM4 |
ENSG00000167460 |
-2.314556695257531 |
[140] |
[37,13,13,60] |
-9 |
hSpCas9 |
negative selection |
6853988 |
16081906 |
16081929 |
19 |
+ |
27260156 |
HCC44 |
viability |
TCCCCAGGCTGAAGGTGATGTGG |
TPM4 |
ENSG00000167460 |
-0.14283549128766265 |
[482] |
[605,215,654,572] |
-2 |
hSpCas9 |
negative selection |
6853992 |
16101256 |
16101279 |
19 |
+ |
27260156 |
G402 |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
0.9305610557945013 |
[409] |
[1119,716,1352,645] |
9 |
hSpCas9 |
negative selection |
6910994 |
16093728 |
16093751 |
19 |
+ |
27260156 |
G402 |
viability |
GGAAAAGACAATTGATGACCTGG |
TPM4 |
ENSG00000167460 |
-3.1417247973177425 |
[140] |
[10,14,0,47] |
-9 |
hSpCas9 |
negative selection |
6975239 |
16081906 |
16081929 |
19 |
+ |
27260156 |
G402 |
viability |
TCCCCAGGCTGAAGGTGATGTGG |
TPM4 |
ENSG00000167460 |
-0.2270165010252969 |
[482] |
[392,774,381,463] |
-3 |
hSpCas9 |
negative selection |
6975243 |
16101256 |
16101279 |
19 |
+ |
27260156 |
L33 |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
-0.02398675839015607 |
[409] |
[344,159,225,517] |
0 |
hSpCas9 |
negative selection |
7032245 |
16093728 |
16093751 |
19 |
+ |
27260156 |
L33 |
viability |
GGAAAAGACAATTGATGACCTGG |
TPM4 |
ENSG00000167460 |
-0.7172542640510444 |
[140] |
[87,39,47,80] |
-9 |
hSpCas9 |
negative selection |
7096490 |
16081906 |
16081929 |
19 |
+ |
27260156 |
L33 |
viability |
TCCCCAGGCTGAAGGTGATGTGG |
TPM4 |
ENSG00000167460 |
-0.1143683423456554 |
[482] |
[551,150,306,373] |
-3 |
hSpCas9 |
negative selection |
7096494 |
16101256 |
16101279 |
19 |
+ |
27260156 |
K562 |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
0.3686317603770096 |
[409] |
[228,521,892,242] |
4 |
hSpCas9 |
negative selection |
7153496 |
16093728 |
16093751 |
19 |
+ |
27260156 |
K562 |
viability |
GGAAAAGACAATTGATGACCTGG |
TPM4 |
ENSG00000167460 |
-3.231942522586495 |
[140] |
[8,11,10,19] |
-9 |
hSpCas9 |
negative selection |
7217741 |
16081906 |
16081929 |
19 |
+ |
27260156 |
K562 |
viability |
TCCCCAGGCTGAAGGTGATGTGG |
TPM4 |
ENSG00000167460 |
-0.6566685052108245 |
[482] |
[319,212,260,290] |
-6 |
hSpCas9 |
negative selection |
7217745 |
16101256 |
16101279 |
19 |
+ |
27260156 |
HT29 |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
0.236112047991525 |
[409] |
[737,601,575,456] |
4 |
hSpCas9 |
negative selection |
7274747 |
16093728 |
16093751 |
19 |
+ |
27260156 |
HT29 |
viability |
GGAAAAGACAATTGATGACCTGG |
TPM4 |
ENSG00000167460 |
-1.367852641434254 |
[140] |
[106,57,66,38] |
-9 |
hSpCas9 |
negative selection |
7338992 |
16081906 |
16081929 |
19 |
+ |
27260156 |
HT29 |
viability |
TCCCCAGGCTGAAGGTGATGTGG |
TPM4 |
ENSG00000167460 |
0.046541016453081535 |
[482] |
[555,649,500,701] |
0 |
hSpCas9 |
negative selection |
7338996 |
16101256 |
16101279 |
19 |
+ |
27260156 |
MHHES1 |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
0.054512441122323174 |
[409] |
[532,492,573,346] |
1 |
hSpCas9 |
negative selection |
7395998 |
16093728 |
16093751 |
19 |
+ |
27260156 |
MHHES1 |
viability |
GGAAAAGACAATTGATGACCTGG |
TPM4 |
ENSG00000167460 |
-1.0769093602373194 |
[140] |
[78,60,75,80] |
-9 |
hSpCas9 |
negative selection |
7460243 |
16081906 |
16081929 |
19 |
+ |
27260156 |
MHHES1 |
viability |
TCCCCAGGCTGAAGGTGATGTGG |
TPM4 |
ENSG00000167460 |
-0.16425439249229962 |
[482] |
[540,522,631,291] |
-3 |
hSpCas9 |
negative selection |
7460247 |
16101256 |
16101279 |
19 |
+ |
27260156 |
MEWO |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
0.23707436700699497 |
[409] |
[525,345,498] |
5 |
hSpCas9 |
negative selection |
7517249 |
16093728 |
16093751 |
19 |
+ |
27260156 |
MEWO |
viability |
GGAAAAGACAATTGATGACCTGG |
TPM4 |
ENSG00000167460 |
-0.7431797029996072 |
[140] |
[173,47,32] |
-9 |
hSpCas9 |
negative selection |
7581494 |
16081906 |
16081929 |
19 |
+ |
27260156 |
MEWO |
viability |
TCCCCAGGCTGAAGGTGATGTGG |
TPM4 |
ENSG00000167460 |
-0.00015000061214669874 |
[482] |
[497,519,345] |
0 |
hSpCas9 |
negative selection |
7581498 |
16101256 |
16101279 |
19 |
+ |
27260156 |
LNCAPCLONEFGC |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
0.4401399891495965 |
[409] |
[582,308,654,501] |
7 |
hSpCas9 |
negative selection |
7638500 |
16093728 |
16093751 |
19 |
+ |
27260156 |
LNCAPCLONEFGC |
viability |
GGAAAAGACAATTGATGACCTGG |
TPM4 |
ENSG00000167460 |
-2.405196931384305 |
[140] |
[26,23,34,11] |
-9 |
hSpCas9 |
negative selection |
7702745 |
16081906 |
16081929 |
19 |
+ |
27260156 |
LNCAPCLONEFGC |
viability |
TCCCCAGGCTGAAGGTGATGTGG |
TPM4 |
ENSG00000167460 |
-0.6284462795480117 |
[482] |
[264,201,352,327] |
-7 |
hSpCas9 |
negative selection |
7702749 |
16101256 |
16101279 |
19 |
+ |
27260156 |
PANC0327 |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
-0.2060909630231755 |
[409] |
[416,309,356,187] |
-3 |
hSpCas9 |
negative selection |
7759751 |
16093728 |
16093751 |
19 |
+ |
27260156 |
PANC0327 |
viability |
GGAAAAGACAATTGATGACCTGG |
TPM4 |
ENSG00000167460 |
-0.8482468313650633 |
[140] |
[38,152,54,17] |
-8 |
hSpCas9 |
negative selection |
7823996 |
16081906 |
16081929 |
19 |
+ |
27260156 |
PANC0327 |
viability |
TCCCCAGGCTGAAGGTGATGTGG |
TPM4 |
ENSG00000167460 |
-0.02329510406183504 |
[482] |
[423,517,232,500] |
0 |
hSpCas9 |
negative selection |
7824000 |
16101256 |
16101279 |
19 |
+ |
27260156 |
NCIH2009 |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
0.11467781654739288 |
[409] |
[721,550,607] |
1 |
hSpCas9 |
negative selection |
7881002 |
16093728 |
16093751 |
19 |
+ |
27260156 |
NCIH2009 |
viability |
GGAAAAGACAATTGATGACCTGG |
TPM4 |
ENSG00000167460 |
-2.3508300567524847 |
[140] |
[47,18,50] |
-9 |
hSpCas9 |
negative selection |
7945247 |
16081906 |
16081929 |
19 |
+ |
27260156 |
NCIH2009 |
viability |
TCCCCAGGCTGAAGGTGATGTGG |
TPM4 |
ENSG00000167460 |
-0.1298669899387804 |
[482] |
[822,777,285] |
-2 |
hSpCas9 |
negative selection |
7945251 |
16101256 |
16101279 |
19 |
+ |
27260156 |
NCIH1373 |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
0.6014888310721247 |
[409] |
[631,726,736,176] |
6 |
hSpCas9 |
negative selection |
8002253 |
16093728 |
16093751 |
19 |
+ |
27260156 |
NCIH1373 |
viability |
GGAAAAGACAATTGATGACCTGG |
TPM4 |
ENSG00000167460 |
-2.877407594692216 |
[140] |
[3,57,8,1] |
-9 |
hSpCas9 |
negative selection |
8066498 |
16081906 |
16081929 |
19 |
+ |
27260156 |
NCIH1373 |
viability |
TCCCCAGGCTGAAGGTGATGTGG |
TPM4 |
ENSG00000167460 |
-1.0923398242844866 |
[482] |
[392,126,221,81] |
-8 |
hSpCas9 |
negative selection |
8066502 |
16101256 |
16101279 |
19 |
+ |
27260156 |
PATU8902 |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
0.1944916204661313 |
[409] |
[872,231,885,538] |
2 |
hSpCas9 |
negative selection |
8123504 |
16093728 |
16093751 |
19 |
+ |
27260156 |
PATU8902 |
viability |
GGAAAAGACAATTGATGACCTGG |
TPM4 |
ENSG00000167460 |
-4.576653435646997 |
[140] |
[2,28,0,0] |
-9 |
hSpCas9 |
negative selection |
8187749 |
16081906 |
16081929 |
19 |
+ |
27260156 |
PATU8902 |
viability |
TCCCCAGGCTGAAGGTGATGTGG |
TPM4 |
ENSG00000167460 |
-1.247154134210379 |
[482] |
[211,69,273,617] |
-8 |
hSpCas9 |
negative selection |
8187753 |
16101256 |
16101279 |
19 |
+ |
27260156 |
PANC1 |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
0.4478112090530947 |
[409] |
[608,561,429,347] |
7 |
hSpCas9 |
negative selection |
8244755 |
16093728 |
16093751 |
19 |
+ |
27260156 |
PANC1 |
viability |
GGAAAAGACAATTGATGACCTGG |
TPM4 |
ENSG00000167460 |
-1.729702138425137 |
[140] |
[73,9,24,30] |
-9 |
hSpCas9 |
negative selection |
8309000 |
16081906 |
16081929 |
19 |
+ |
27260156 |
PANC1 |
viability |
TCCCCAGGCTGAAGGTGATGTGG |
TPM4 |
ENSG00000167460 |
-0.11408501015646873 |
[482] |
[512,405,262,350] |
-2 |
hSpCas9 |
negative selection |
8309004 |
16101256 |
16101279 |
19 |
+ |
27260156 |
PANC0813 |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
0.3446301832019907 |
[409] |
[511,573,796,556] |
5 |
hSpCas9 |
negative selection |
8366006 |
16093728 |
16093751 |
19 |
+ |
27260156 |
PANC0813 |
viability |
GGAAAAGACAATTGATGACCTGG |
TPM4 |
ENSG00000167460 |
-2.740130918864783 |
[140] |
[21,22,13,38] |
-9 |
hSpCas9 |
negative selection |
8430251 |
16081906 |
16081929 |
19 |
+ |
27260156 |
PANC0813 |
viability |
TCCCCAGGCTGAAGGTGATGTGG |
TPM4 |
ENSG00000167460 |
0.014465986916083598 |
[482] |
[378,913,382,594] |
0 |
hSpCas9 |
negative selection |
8430255 |
16101256 |
16101279 |
19 |
+ |
27260156 |
RDES |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
0.34266568070600867 |
[409] |
[447,596,704,671] |
5 |
hSpCas9 |
negative selection |
8487257 |
16093728 |
16093751 |
19 |
+ |
27260156 |
RDES |
viability |
GGAAAAGACAATTGATGACCTGG |
TPM4 |
ENSG00000167460 |
-2.193144172365897 |
[140] |
[28,18,59,36] |
-9 |
hSpCas9 |
negative selection |
8551502 |
16081906 |
16081929 |
19 |
+ |
27260156 |
RDES |
viability |
TCCCCAGGCTGAAGGTGATGTGG |
TPM4 |
ENSG00000167460 |
-0.25113174429716817 |
[482] |
[313,525,541,507] |
-4 |
hSpCas9 |
negative selection |
8551506 |
16101256 |
16101279 |
19 |
+ |
27260156 |
PC3 |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
0.20142382748048565 |
[409] |
[359,476,656,449] |
4 |
hSpCas9 |
negative selection |
8608508 |
16093728 |
16093751 |
19 |
+ |
27260156 |
PC3 |
viability |
GGAAAAGACAATTGATGACCTGG |
TPM4 |
ENSG00000167460 |
-0.7800989771807669 |
[140] |
[56,65,33,157] |
-9 |
hSpCas9 |
negative selection |
8672753 |
16081906 |
16081929 |
19 |
+ |
27260156 |
PC3 |
viability |
TCCCCAGGCTGAAGGTGATGTGG |
TPM4 |
ENSG00000167460 |
-0.23920985967074856 |
[482] |
[267,424,635,409] |
-5 |
hSpCas9 |
negative selection |
8672757 |
16101256 |
16101279 |
19 |
+ |
27260156 |
PATU8988T |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
0.6400859221061487 |
[409] |
[423,790,782,473] |
9 |
hSpCas9 |
negative selection |
8729759 |
16093728 |
16093751 |
19 |
+ |
27260156 |
PATU8988T |
viability |
GGAAAAGACAATTGATGACCTGG |
TPM4 |
ENSG00000167460 |
-1.97556107612151 |
[140] |
[23,41,20,53] |
-9 |
hSpCas9 |
negative selection |
8794004 |
16081906 |
16081929 |
19 |
+ |
27260156 |
PATU8988T |
viability |
TCCCCAGGCTGAAGGTGATGTGG |
TPM4 |
ENSG00000167460 |
-0.018541543065970133 |
[482] |
[428,419,422,576] |
0 |
hSpCas9 |
negative selection |
8794008 |
16101256 |
16101279 |
19 |
+ |
27260156 |
T47D |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
0.3410360143638611 |
[409] |
[560,567,658,634] |
7 |
hSpCas9 |
negative selection |
8851010 |
16093728 |
16093751 |
19 |
+ |
27260156 |
T47D |
viability |
GGAAAAGACAATTGATGACCTGG |
TPM4 |
ENSG00000167460 |
-1.3228932962101358 |
[140] |
[95,62,46,56] |
-9 |
hSpCas9 |
negative selection |
8915255 |
16081906 |
16081929 |
19 |
+ |
27260156 |
T47D |
viability |
TCCCCAGGCTGAAGGTGATGTGG |
TPM4 |
ENSG00000167460 |
-0.20073702075620087 |
[482] |
[600,447,451,460] |
-4 |
hSpCas9 |
negative selection |
8915259 |
16101256 |
16101279 |
19 |
+ |
27260156 |
SU8686 |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
0.35577733357044855 |
[409] |
[430,451,621,607] |
6 |
hSpCas9 |
negative selection |
8972261 |
16093728 |
16093751 |
19 |
+ |
27260156 |
SU8686 |
viability |
GGAAAAGACAATTGATGACCTGG |
TPM4 |
ENSG00000167460 |
-2.526235720733295 |
[140] |
[25,18,24,27] |
-9 |
hSpCas9 |
negative selection |
9036506 |
16081906 |
16081929 |
19 |
+ |
27260156 |
SU8686 |
viability |
TCCCCAGGCTGAAGGTGATGTGG |
TPM4 |
ENSG00000167460 |
-0.40208912986295 |
[482] |
[298,308,361,515] |
-6 |
hSpCas9 |
negative selection |
9036510 |
16101256 |
16101279 |
19 |
+ |
27260156 |
SKES1 |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
0.27214246926157903 |
[409] |
[584,473,631,309] |
6 |
hSpCas9 |
negative selection |
9093512 |
16093728 |
16093751 |
19 |
+ |
27260156 |
SKES1 |
viability |
GGAAAAGACAATTGATGACCTGG |
TPM4 |
ENSG00000167460 |
-1.5570563040855891 |
[140] |
[30,60,50,46] |
-9 |
hSpCas9 |
negative selection |
9157757 |
16081906 |
16081929 |
19 |
+ |
27260156 |
SKES1 |
viability |
TCCCCAGGCTGAAGGTGATGTGG |
TPM4 |
ENSG00000167460 |
-0.3465842151170346 |
[482] |
[464,531,357,207] |
-6 |
hSpCas9 |
negative selection |
9157761 |
16101256 |
16101279 |
19 |
+ |
27260156 |
TOV112D |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
0.5473618783522779 |
[409] |
[539,856,438,620] |
8 |
hSpCas9 |
negative selection |
9214763 |
16093728 |
16093751 |
19 |
+ |
27260156 |
TOV112D |
viability |
GGAAAAGACAATTGATGACCTGG |
TPM4 |
ENSG00000167460 |
-1.5222236054691105 |
[140] |
[51,72,39,37] |
-9 |
hSpCas9 |
negative selection |
9279008 |
16081906 |
16081929 |
19 |
+ |
27260156 |
TOV112D |
viability |
TCCCCAGGCTGAAGGTGATGTGG |
TPM4 |
ENSG00000167460 |
-0.14878731965730235 |
[482] |
[442,592,500,251] |
-3 |
hSpCas9 |
negative selection |
9279012 |
16101256 |
16101279 |
19 |
+ |
27260156 |
TC71 |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
0.1741986314952242 |
[409] |
[418,488,444,642] |
4 |
hSpCas9 |
negative selection |
9336014 |
16093728 |
16093751 |
19 |
+ |
27260156 |
TC71 |
viability |
GGAAAAGACAATTGATGACCTGG |
TPM4 |
ENSG00000167460 |
-0.782327110956458 |
[140] |
[104,108,53,83] |
-9 |
hSpCas9 |
negative selection |
9400259 |
16081906 |
16081929 |
19 |
+ |
27260156 |
TC71 |
viability |
TCCCCAGGCTGAAGGTGATGTGG |
TPM4 |
ENSG00000167460 |
-0.1176807629208476 |
[482] |
[613,443,443,399] |
-3 |
hSpCas9 |
negative selection |
9400263 |
16101256 |
16101279 |
19 |
+ |
27260156 |
TC32 |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
0.2484215123540129 |
[409] |
[435,408,645,358] |
4 |
hSpCas9 |
negative selection |
9457265 |
16093728 |
16093751 |
19 |
+ |
27260156 |
TC32 |
viability |
GGAAAAGACAATTGATGACCTGG |
TPM4 |
ENSG00000167460 |
-1.238313787108085 |
[140] |
[33,57,60,71] |
-9 |
hSpCas9 |
negative selection |
9521510 |
16081906 |
16081929 |
19 |
+ |
27260156 |
TC32 |
viability |
TCCCCAGGCTGAAGGTGATGTGG |
TPM4 |
ENSG00000167460 |
-0.2506078072201087 |
[482] |
[495,130,443,533] |
-4 |
hSpCas9 |
negative selection |
9521514 |
16081909 |
16081932 |
19 |
- |
27869803 |
HPAFII |
viability after 27 days |
CGGCCACATCACCTTCAGCCTGG |
TPM4 |
ENSG00000167460 |
0.559867988363435 |
[437] |
[369,313,NaN] |
4 |
hSpCas9 |
negative selection |
9566131 |
16101256 |
16101279 |
19 |
+ |
27869803 |
HPAFII |
viability after 27 days |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
-0.6122698467168916 |
[248] |
[71,96,NaN] |
-4 |
hSpCas9 |
negative selection |
9566133 |
16081909 |
16081932 |
19 |
- |
27869803 |
HPAFII |
viability after 15 days |
CGGCCACATCACCTTCAGCCTGG |
TPM4 |
ENSG00000167460 |
0.15970690899584306 |
[437] |
[724,401,NaN] |
1 |
hSpCas9 |
negative selection |
9648580 |
16101256 |
16101279 |
19 |
+ |
27869803 |
HPAFII |
viability after 15 days |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
0.01933865496442846 |
[248] |
[121,363,NaN] |
0 |
hSpCas9 |
negative selection |
9648582 |
16081909 |
16081932 |
19 |
- |
27869803 |
ASPC1 |
viability after 36 days |
CGGCCACATCACCTTCAGCCTGG |
TPM4 |
ENSG00000167460 |
-0.5882910781652858 |
[1318] |
[387,262,279] |
-5 |
hSpCas9 |
negative selection |
9731029 |
16101256 |
16101279 |
19 |
+ |
27869803 |
ASPC1 |
viability after 36 days |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
-1.125432427681378 |
[626] |
[235,44,47] |
-8 |
hSpCas9 |
negative selection |
9731031 |
16081909 |
16081932 |
19 |
- |
27869803 |
PATU8988S |
viability after 35 days |
CGGCCACATCACCTTCAGCCTGG |
TPM4 |
ENSG00000167460 |
0.598660571187731 |
[1069] |
[687,616,NaN] |
6 |
hSpCas9 |
negative selection |
9813478 |
16101256 |
16101279 |
19 |
+ |
27869803 |
PATU8988S |
viability after 35 days |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
0.28303711251788777 |
[480] |
[109,361,NaN] |
3 |
hSpCas9 |
negative selection |
9813480 |
16081909 |
16081932 |
19 |
- |
27869803 |
PATU8988S |
viability after 31 days |
CGGCCACATCACCTTCAGCCTGG |
TPM4 |
ENSG00000167460 |
0.5218010380850612 |
[1069] |
[656,555,NaN] |
6 |
hSpCas9 |
negative selection |
9895927 |
16101256 |
16101279 |
19 |
+ |
27869803 |
PATU8988S |
viability after 31 days |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
0.02283032575024785 |
[480] |
[72,349,NaN] |
0 |
hSpCas9 |
negative selection |
9895929 |
16081909 |
16081932 |
19 |
- |
27869803 |
HPAFII |
viability after 35 days |
CGGCCACATCACCTTCAGCCTGG |
TPM4 |
ENSG00000167460 |
0.43790581533378203 |
[437] |
[218,391,NaN] |
3 |
hSpCas9 |
negative selection |
9978376 |
16101256 |
16101279 |
19 |
+ |
27869803 |
HPAFII |
viability after 35 days |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
-0.13202669730123573 |
[248] |
[59,176,NaN] |
-1 |
hSpCas9 |
negative selection |
9978378 |
16081909 |
16081932 |
19 |
- |
27869803 |
HPAFII |
viability after 31 days |
CGGCCACATCACCTTCAGCCTGG |
TPM4 |
ENSG00000167460 |
0.39486752793851676 |
[437] |
[282,366,NaN] |
3 |
hSpCas9 |
negative selection |
10060825 |
16101256 |
16101279 |
19 |
+ |
27869803 |
HPAFII |
viability after 31 days |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
-0.29835821547588764 |
[248] |
[71,158,NaN] |
-2 |
hSpCas9 |
negative selection |
10060827 |
16086519 |
16086542 |
19 |
+ |
28162770 |
P31FUJ |
viability |
GGCTGACCGCAAATACGAGGAGG |
TPM4 |
ENSG00000167460 |
-0.4500329206350475 |
[92] |
[79] |
-4 |
hSpCas9 |
negative selection |
10255767 |
16067648 |
16067671 |
19 |
+ |
28162770 |
P31FUJ |
viability |
GCAGATGCTGAAGTTGGACAAGG |
TPM4 |
ENSG00000167460 |
0.01836659334224855 |
[935] |
[1113] |
0 |
hSpCas9 |
negative selection |
10255768 |
16088065 |
16088088 |
19 |
+ |
28162770 |
P31FUJ |
viability |
GAGGGCAGAGGAGCGTGCGGAGG |
TPM4 |
ENSG00000167460 |
-0.419887757014874 |
[73] |
[64] |
-4 |
hSpCas9 |
negative selection |
10255769 |
16081992 |
16082015 |
19 |
- |
28162770 |
P31FUJ |
viability |
CTCCAGCTTCTGCAGGGCCGTGG |
TPM4 |
ENSG00000167460 |
0.9705259552951476 |
[184] |
[425] |
9 |
hSpCas9 |
negative selection |
10255770 |
16093529 |
16093552 |
19 |
+ |
28162770 |
P31FUJ |
viability |
CCCACAGTATTCTGAAAAGGAGG |
TPM4 |
ENSG00000167460 |
0.9570223544656384 |
[191] |
[437] |
9 |
hSpCas9 |
negative selection |
10255771 |
16086411 |
16086434 |
19 |
+ |
28162770 |
P31FUJ |
viability |
TGCTCCTTGCAGAGGAATGAAGG |
TPM4 |
ENSG00000167460 |
0.33518721770306414 |
[113] |
[168] |
3 |
hSpCas9 |
negative selection |
10255772 |
16089039 |
16089062 |
19 |
+ |
28162770 |
P31FUJ |
viability |
GTGCAGAAAATGTGGTGACCTGG |
TPM4 |
ENSG00000167460 |
0.23523227239718003 |
[607] |
[840] |
2 |
hSpCas9 |
negative selection |
10255773 |
16088020 |
16088043 |
19 |
+ |
28162770 |
P31FUJ |
viability |
TCTGCAGGTAGCTCGTAAGCTGG |
TPM4 |
ENSG00000167460 |
0.2783962416347231 |
[213] |
[304] |
3 |
hSpCas9 |
negative selection |
10255774 |
16101256 |
16101279 |
19 |
+ |
28162770 |
P31FUJ |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
-1.1186311844950676 |
[254] |
[137] |
-7 |
hSpCas9 |
negative selection |
10255775 |
16086519 |
16086542 |
19 |
+ |
28162770 |
TF1 |
viability |
GGCTGACCGCAAATACGAGGAGG |
TPM4 |
ENSG00000167460 |
NaN |
[NaN] |
[215] |
1 |
hSpCas9 |
negative selection |
10425133 |
16067648 |
16067671 |
19 |
+ |
28162770 |
TF1 |
viability |
GCAGATGCTGAAGTTGGACAAGG |
TPM4 |
ENSG00000167460 |
NaN |
[NaN] |
[487] |
1 |
hSpCas9 |
negative selection |
10425134 |
16088065 |
16088088 |
19 |
+ |
28162770 |
TF1 |
viability |
GAGGGCAGAGGAGCGTGCGGAGG |
TPM4 |
ENSG00000167460 |
NaN |
[NaN] |
[72] |
1 |
hSpCas9 |
negative selection |
10425135 |
16081992 |
16082015 |
19 |
- |
28162770 |
TF1 |
viability |
CTCCAGCTTCTGCAGGGCCGTGG |
TPM4 |
ENSG00000167460 |
NaN |
[NaN] |
[244] |
1 |
hSpCas9 |
negative selection |
10425136 |
16093529 |
16093552 |
19 |
+ |
28162770 |
TF1 |
viability |
CCCACAGTATTCTGAAAAGGAGG |
TPM4 |
ENSG00000167460 |
NaN |
[NaN] |
[236] |
1 |
hSpCas9 |
negative selection |
10425137 |
16086411 |
16086434 |
19 |
+ |
28162770 |
TF1 |
viability |
TGCTCCTTGCAGAGGAATGAAGG |
TPM4 |
ENSG00000167460 |
NaN |
[NaN] |
[81] |
1 |
hSpCas9 |
negative selection |
10425138 |
16089039 |
16089062 |
19 |
+ |
28162770 |
TF1 |
viability |
GTGCAGAAAATGTGGTGACCTGG |
TPM4 |
ENSG00000167460 |
NaN |
[NaN] |
[477] |
1 |
hSpCas9 |
negative selection |
10425139 |
16088020 |
16088043 |
19 |
+ |
28162770 |
TF1 |
viability |
TCTGCAGGTAGCTCGTAAGCTGG |
TPM4 |
ENSG00000167460 |
NaN |
[NaN] |
[282] |
1 |
hSpCas9 |
negative selection |
10425140 |
16101256 |
16101279 |
19 |
+ |
28162770 |
TF1 |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
NaN |
[NaN] |
[108] |
1 |
hSpCas9 |
negative selection |
10425141 |
16086519 |
16086542 |
19 |
+ |
28162770 |
SKM1 |
viability |
GGCTGACCGCAAATACGAGGAGG |
TPM4 |
ENSG00000167460 |
0.31126483284145856 |
[30] |
[67] |
3 |
hSpCas9 |
negative selection |
10594499 |
16067648 |
16067671 |
19 |
+ |
28162770 |
SKM1 |
viability |
GCAGATGCTGAAGTTGGACAAGG |
TPM4 |
ENSG00000167460 |
0.4330399170582575 |
[180] |
[431] |
4 |
hSpCas9 |
negative selection |
10594500 |
16088065 |
16088088 |
19 |
+ |
28162770 |
SKM1 |
viability |
GAGGGCAGAGGAGCGTGCGGAGG |
TPM4 |
ENSG00000167460 |
-1.0443941193584534 |
[27] |
[23] |
-6 |
hSpCas9 |
negative selection |
10594501 |
16081992 |
16082015 |
19 |
- |
28162770 |
SKM1 |
viability |
CTCCAGCTTCTGCAGGGCCGTGG |
TPM4 |
ENSG00000167460 |
0.6200028488571078 |
[52] |
[143] |
6 |
hSpCas9 |
negative selection |
10594502 |
16093529 |
16093552 |
19 |
+ |
28162770 |
SKM1 |
viability |
CCCACAGTATTCTGAAAAGGAGG |
TPM4 |
ENSG00000167460 |
1.0801509785798502 |
[60] |
[227] |
8 |
hSpCas9 |
negative selection |
10594503 |
16086411 |
16086434 |
19 |
+ |
28162770 |
SKM1 |
viability |
TGCTCCTTGCAGAGGAATGAAGG |
TPM4 |
ENSG00000167460 |
0.5565099252317243 |
[29] |
[77] |
5 |
hSpCas9 |
negative selection |
10594504 |
16089039 |
16089062 |
19 |
+ |
28162770 |
SKM1 |
viability |
GTGCAGAAAATGTGGTGACCTGG |
TPM4 |
ENSG00000167460 |
-0.15642073709256477 |
[173] |
[275] |
-1 |
hSpCas9 |
negative selection |
10594505 |
16088020 |
16088043 |
19 |
+ |
28162770 |
SKM1 |
viability |
TCTGCAGGTAGCTCGTAAGCTGG |
TPM4 |
ENSG00000167460 |
1.6054195257126707 |
[28] |
[155] |
9 |
hSpCas9 |
negative selection |
10594506 |
16101256 |
16101279 |
19 |
+ |
28162770 |
SKM1 |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
0.1650592462704962 |
[55] |
[110] |
1 |
hSpCas9 |
negative selection |
10594507 |
16086519 |
16086542 |
19 |
+ |
28162770 |
SKM1 |
viability |
GGCTGACCGCAAATACGAGGAGG |
TPM4 |
ENSG00000167460 |
0.31126483284145856 |
[30] |
[67] |
3 |
hSpCas9 |
negative selection |
10763865 |
16067648 |
16067671 |
19 |
+ |
28162770 |
SKM1 |
viability |
GCAGATGCTGAAGTTGGACAAGG |
TPM4 |
ENSG00000167460 |
0.4330399170582575 |
[180] |
[431] |
4 |
hSpCas9 |
negative selection |
10763866 |
16088065 |
16088088 |
19 |
+ |
28162770 |
SKM1 |
viability |
GAGGGCAGAGGAGCGTGCGGAGG |
TPM4 |
ENSG00000167460 |
-1.0443941193584534 |
[27] |
[23] |
-6 |
hSpCas9 |
negative selection |
10763867 |
16081992 |
16082015 |
19 |
- |
28162770 |
SKM1 |
viability |
CTCCAGCTTCTGCAGGGCCGTGG |
TPM4 |
ENSG00000167460 |
0.6200028488571078 |
[52] |
[143] |
6 |
hSpCas9 |
negative selection |
10763868 |
16093529 |
16093552 |
19 |
+ |
28162770 |
SKM1 |
viability |
CCCACAGTATTCTGAAAAGGAGG |
TPM4 |
ENSG00000167460 |
1.0801509785798502 |
[60] |
[227] |
8 |
hSpCas9 |
negative selection |
10763869 |
16086411 |
16086434 |
19 |
+ |
28162770 |
SKM1 |
viability |
TGCTCCTTGCAGAGGAATGAAGG |
TPM4 |
ENSG00000167460 |
0.5565099252317243 |
[29] |
[77] |
5 |
hSpCas9 |
negative selection |
10763870 |
16089039 |
16089062 |
19 |
+ |
28162770 |
SKM1 |
viability |
GTGCAGAAAATGTGGTGACCTGG |
TPM4 |
ENSG00000167460 |
-0.15642073709256477 |
[173] |
[275] |
-1 |
hSpCas9 |
negative selection |
10763871 |
16088020 |
16088043 |
19 |
+ |
28162770 |
SKM1 |
viability |
TCTGCAGGTAGCTCGTAAGCTGG |
TPM4 |
ENSG00000167460 |
1.6054195257126707 |
[28] |
[155] |
9 |
hSpCas9 |
negative selection |
10763872 |
16101256 |
16101279 |
19 |
+ |
28162770 |
SKM1 |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
0.1650592462704962 |
[55] |
[110] |
1 |
hSpCas9 |
negative selection |
10763873 |
16086519 |
16086542 |
19 |
+ |
28162770 |
PL21 |
viability |
GGCTGACCGCAAATACGAGGAGG |
TPM4 |
ENSG00000167460 |
-0.16060772928857014 |
[112] |
[43] |
-1 |
hSpCas9 |
negative selection |
10933231 |
16067648 |
16067671 |
19 |
+ |
28162770 |
PL21 |
viability |
GCAGATGCTGAAGTTGGACAAGG |
TPM4 |
ENSG00000167460 |
-0.042716909406843584 |
[638] |
[269] |
0 |
hSpCas9 |
negative selection |
10933232 |
16088065 |
16088088 |
19 |
+ |
28162770 |
PL21 |
viability |
GAGGGCAGAGGAGCGTGCGGAGG |
TPM4 |
ENSG00000167460 |
-2.9373639092606147 |
[87] |
[4] |
-9 |
hSpCas9 |
negative selection |
10933233 |
16081992 |
16082015 |
19 |
- |
28162770 |
PL21 |
viability |
CTCCAGCTTCTGCAGGGCCGTGG |
TPM4 |
ENSG00000167460 |
0.35338587478500216 |
[231] |
[128] |
3 |
hSpCas9 |
negative selection |
10933234 |
16093529 |
16093552 |
19 |
+ |
28162770 |
PL21 |
viability |
CCCACAGTATTCTGAAAAGGAGG |
TPM4 |
ENSG00000167460 |
0.03400619220938206 |
[284] |
[126] |
0 |
hSpCas9 |
negative selection |
10933235 |
16086411 |
16086434 |
19 |
+ |
28162770 |
PL21 |
viability |
TGCTCCTTGCAGAGGAATGAAGG |
TPM4 |
ENSG00000167460 |
0.37347121737488187 |
[93] |
[52] |
3 |
hSpCas9 |
negative selection |
10933236 |
16089039 |
16089062 |
19 |
+ |
28162770 |
PL21 |
viability |
GTGCAGAAAATGTGGTGACCTGG |
TPM4 |
ENSG00000167460 |
0.4908167753922428 |
[447] |
[273] |
4 |
hSpCas9 |
negative selection |
10933237 |
16088020 |
16088043 |
19 |
+ |
28162770 |
PL21 |
viability |
TCTGCAGGTAGCTCGTAAGCTGG |
TPM4 |
ENSG00000167460 |
-0.3848228862318363 |
[152] |
[50] |
-3 |
hSpCas9 |
negative selection |
10933238 |
16101256 |
16101279 |
19 |
+ |
28162770 |
PL21 |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
-1.2225514573329588 |
[251] |
[46] |
-7 |
hSpCas9 |
negative selection |
10933239 |
16086519 |
16086542 |
19 |
+ |
28162770 |
P31FUJ |
viability |
GGCTGACCGCAAATACGAGGAGG |
TPM4 |
ENSG00000167460 |
-0.4500329206350475 |
[92] |
[79] |
-4 |
hSpCas9 |
negative selection |
11102597 |
16067648 |
16067671 |
19 |
+ |
28162770 |
P31FUJ |
viability |
GCAGATGCTGAAGTTGGACAAGG |
TPM4 |
ENSG00000167460 |
0.01836659334224855 |
[935] |
[1113] |
0 |
hSpCas9 |
negative selection |
11102598 |
16088065 |
16088088 |
19 |
+ |
28162770 |
P31FUJ |
viability |
GAGGGCAGAGGAGCGTGCGGAGG |
TPM4 |
ENSG00000167460 |
-0.419887757014874 |
[73] |
[64] |
-4 |
hSpCas9 |
negative selection |
11102599 |
16081992 |
16082015 |
19 |
- |
28162770 |
P31FUJ |
viability |
CTCCAGCTTCTGCAGGGCCGTGG |
TPM4 |
ENSG00000167460 |
0.9705259552951476 |
[184] |
[425] |
9 |
hSpCas9 |
negative selection |
11102600 |
16093529 |
16093552 |
19 |
+ |
28162770 |
P31FUJ |
viability |
CCCACAGTATTCTGAAAAGGAGG |
TPM4 |
ENSG00000167460 |
0.9570223544656384 |
[191] |
[437] |
9 |
hSpCas9 |
negative selection |
11102601 |
16086411 |
16086434 |
19 |
+ |
28162770 |
P31FUJ |
viability |
TGCTCCTTGCAGAGGAATGAAGG |
TPM4 |
ENSG00000167460 |
0.33518721770306414 |
[113] |
[168] |
3 |
hSpCas9 |
negative selection |
11102602 |
16089039 |
16089062 |
19 |
+ |
28162770 |
P31FUJ |
viability |
GTGCAGAAAATGTGGTGACCTGG |
TPM4 |
ENSG00000167460 |
0.23523227239718003 |
[607] |
[840] |
2 |
hSpCas9 |
negative selection |
11102603 |
16088020 |
16088043 |
19 |
+ |
28162770 |
P31FUJ |
viability |
TCTGCAGGTAGCTCGTAAGCTGG |
TPM4 |
ENSG00000167460 |
0.2783962416347231 |
[213] |
[304] |
3 |
hSpCas9 |
negative selection |
11102604 |
16101256 |
16101279 |
19 |
+ |
28162770 |
P31FUJ |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
-1.1186311844950676 |
[254] |
[137] |
-7 |
hSpCas9 |
negative selection |
11102605 |
16086519 |
16086542 |
19 |
+ |
28162770 |
OCIAML5 |
viability |
GGCTGACCGCAAATACGAGGAGG |
TPM4 |
ENSG00000167460 |
0.03427664734043612 |
[32] |
[60] |
0 |
hSpCas9 |
negative selection |
11271963 |
16067648 |
16067671 |
19 |
+ |
28162770 |
OCIAML5 |
viability |
GCAGATGCTGAAGTTGGACAAGG |
TPM4 |
ENSG00000167460 |
-0.23934840374545896 |
[428] |
[655] |
-2 |
hSpCas9 |
negative selection |
11271964 |
16088065 |
16088088 |
19 |
+ |
28162770 |
OCIAML5 |
viability |
GAGGGCAGAGGAGCGTGCGGAGG |
TPM4 |
ENSG00000167460 |
-3.0219915723063098 |
[71] |
[15] |
-8 |
hSpCas9 |
negative selection |
11271965 |
16081992 |
16082015 |
19 |
- |
28162770 |
OCIAML5 |
viability |
CTCCAGCTTCTGCAGGGCCGTGG |
TPM4 |
ENSG00000167460 |
0.4364385224859151 |
[130] |
[319] |
4 |
hSpCas9 |
negative selection |
11271966 |
16093529 |
16093552 |
19 |
+ |
28162770 |
OCIAML5 |
viability |
CCCACAGTATTCTGAAAAGGAGG |
TPM4 |
ENSG00000167460 |
0.0947627701146656 |
[151] |
[292] |
0 |
hSpCas9 |
negative selection |
11271967 |
16086411 |
16086434 |
19 |
+ |
28162770 |
OCIAML5 |
viability |
TGCTCCTTGCAGAGGAATGAAGG |
TPM4 |
ENSG00000167460 |
-0.238421315438756 |
[82] |
[126] |
-2 |
hSpCas9 |
negative selection |
11271968 |
16089039 |
16089062 |
19 |
+ |
28162770 |
OCIAML5 |
viability |
GTGCAGAAAATGTGGTGACCTGG |
TPM4 |
ENSG00000167460 |
-0.5276883847437457 |
[352] |
[441] |
-4 |
hSpCas9 |
negative selection |
11271969 |
16088020 |
16088043 |
19 |
+ |
28162770 |
OCIAML5 |
viability |
TCTGCAGGTAGCTCGTAAGCTGG |
TPM4 |
ENSG00000167460 |
0.41096783496979666 |
[124] |
[299] |
3 |
hSpCas9 |
negative selection |
11271970 |
16101256 |
16101279 |
19 |
+ |
28162770 |
OCIAML5 |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
0.91346817549898 |
[94] |
[322] |
7 |
hSpCas9 |
negative selection |
11271971 |
16086519 |
16086542 |
19 |
+ |
28162770 |
EOL1 |
viability |
GGCTGACCGCAAATACGAGGAGG |
TPM4 |
ENSG00000167460 |
0.3681544230461495 |
[174] |
[118] |
3 |
hSpCas9 |
negative selection |
11441329 |
16067648 |
16067671 |
19 |
+ |
28162770 |
EOL1 |
viability |
GCAGATGCTGAAGTTGGACAAGG |
TPM4 |
ENSG00000167460 |
0.08037257596799297 |
[753] |
[419] |
0 |
hSpCas9 |
negative selection |
11441330 |
16088065 |
16088088 |
19 |
+ |
28162770 |
EOL1 |
viability |
GAGGGCAGAGGAGCGTGCGGAGG |
TPM4 |
ENSG00000167460 |
-0.9948337682211811 |
[173] |
[45] |
-6 |
hSpCas9 |
negative selection |
11441331 |
16081992 |
16082015 |
19 |
- |
28162770 |
EOL1 |
viability |
CTCCAGCTTCTGCAGGGCCGTGG |
TPM4 |
ENSG00000167460 |
-0.30865140472249614 |
[401] |
[170] |
-2 |
hSpCas9 |
negative selection |
11441332 |
16093529 |
16093552 |
19 |
+ |
28162770 |
EOL1 |
viability |
CCCACAGTATTCTGAAAAGGAGG |
TPM4 |
ENSG00000167460 |
-0.3307092836715401 |
[443] |
[185] |
-2 |
hSpCas9 |
negative selection |
11441333 |
16086411 |
16086434 |
19 |
+ |
28162770 |
EOL1 |
viability |
TGCTCCTTGCAGAGGAATGAAGG |
TPM4 |
ENSG00000167460 |
-1.5558841456793147 |
[172] |
[30] |
-7 |
hSpCas9 |
negative selection |
11441334 |
16089039 |
16089062 |
19 |
+ |
28162770 |
EOL1 |
viability |
GTGCAGAAAATGTGGTGACCTGG |
TPM4 |
ENSG00000167460 |
-0.06232479444385286 |
[546] |
[275] |
0 |
hSpCas9 |
negative selection |
11441335 |
16088020 |
16088043 |
19 |
+ |
28162770 |
EOL1 |
viability |
TCTGCAGGTAGCTCGTAAGCTGG |
TPM4 |
ENSG00000167460 |
0.2140543887655194 |
[197] |
[120] |
2 |
hSpCas9 |
negative selection |
11441336 |
16101256 |
16101279 |
19 |
+ |
28162770 |
EOL1 |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
0.30563793892604074 |
[257] |
[167] |
2 |
hSpCas9 |
negative selection |
11441337 |
16086519 |
16086542 |
19 |
+ |
28162770 |
MOLM13 |
viability |
GGCTGACCGCAAATACGAGGAGG |
TPM4 |
ENSG00000167460 |
-0.821617235650406 |
[153] |
[62] |
-4 |
hSpCas9 |
negative selection |
11610695 |
16067648 |
16067671 |
19 |
+ |
28162770 |
MOLM13 |
viability |
GCAGATGCTGAAGTTGGACAAGG |
TPM4 |
ENSG00000167460 |
0.30216681546782764 |
[856] |
[763] |
2 |
hSpCas9 |
negative selection |
11610696 |
16088065 |
16088088 |
19 |
+ |
28162770 |
MOLM13 |
viability |
GAGGGCAGAGGAGCGTGCGGAGG |
TPM4 |
ENSG00000167460 |
-3.068163518695631 |
[115] |
[9] |
-8 |
hSpCas9 |
negative selection |
11610697 |
16081992 |
16082015 |
19 |
- |
28162770 |
MOLM13 |
viability |
CTCCAGCTTCTGCAGGGCCGTGG |
TPM4 |
ENSG00000167460 |
1.1459612866572162 |
[284] |
[455] |
8 |
hSpCas9 |
negative selection |
11610698 |
16093529 |
16093552 |
19 |
+ |
28162770 |
MOLM13 |
viability |
CCCACAGTATTCTGAAAAGGAGG |
TPM4 |
ENSG00000167460 |
0.45437457507009715 |
[428] |
[424] |
3 |
hSpCas9 |
negative selection |
11610699 |
16086411 |
16086434 |
19 |
+ |
28162770 |
MOLM13 |
viability |
TGCTCCTTGCAGAGGAATGAAGG |
TPM4 |
ENSG00000167460 |
1.4076718587104722 |
[158] |
[304] |
9 |
hSpCas9 |
negative selection |
11610700 |
16089039 |
16089062 |
19 |
+ |
28162770 |
MOLM13 |
viability |
GTGCAGAAAATGTGGTGACCTGG |
TPM4 |
ENSG00000167460 |
0.2780648226645617 |
[583] |
[511] |
2 |
hSpCas9 |
negative selection |
11610701 |
16088020 |
16088043 |
19 |
+ |
28162770 |
MOLM13 |
viability |
TCTGCAGGTAGCTCGTAAGCTGG |
TPM4 |
ENSG00000167460 |
0.8813300958890931 |
[225] |
[300] |
6 |
hSpCas9 |
negative selection |
11610702 |
16101256 |
16101279 |
19 |
+ |
28162770 |
MOLM13 |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
-0.241520490101066 |
[241] |
[147] |
-1 |
hSpCas9 |
negative selection |
11610703 |
16086519 |
16086542 |
19 |
+ |
28162770 |
HEL |
viability |
GGCTGACCGCAAATACGAGGAGG |
TPM4 |
ENSG00000167460 |
1.2995942512032987 |
[136] |
[215] |
9 |
hSpCas9 |
negative selection |
11780061 |
16067648 |
16067671 |
19 |
+ |
28162770 |
HEL |
viability |
GCAGATGCTGAAGTTGGACAAGG |
TPM4 |
ENSG00000167460 |
0.26478127456956324 |
[780] |
[600] |
2 |
hSpCas9 |
negative selection |
11780062 |
16088065 |
16088088 |
19 |
+ |
28162770 |
HEL |
viability |
GAGGGCAGAGGAGCGTGCGGAGG |
TPM4 |
ENSG00000167460 |
0.40173073249656177 |
[90] |
[76] |
3 |
hSpCas9 |
negative selection |
11780063 |
16081992 |
16082015 |
19 |
- |
28162770 |
HEL |
viability |
CTCCAGCTTCTGCAGGGCCGTGG |
TPM4 |
ENSG00000167460 |
1.652324880829555 |
[224] |
[452] |
9 |
hSpCas9 |
negative selection |
11780064 |
16093529 |
16093552 |
19 |
+ |
28162770 |
HEL |
viability |
CCCACAGTATTCTGAAAAGGAGG |
TPM4 |
ENSG00000167460 |
0.2513138899434636 |
[302] |
[230] |
2 |
hSpCas9 |
negative selection |
11780065 |
16086411 |
16086434 |
19 |
+ |
28162770 |
HEL |
viability |
TGCTCCTTGCAGAGGAATGAAGG |
TPM4 |
ENSG00000167460 |
-0.07896000551253873 |
[187] |
[113] |
0 |
hSpCas9 |
negative selection |
11780066 |
16089039 |
16089062 |
19 |
+ |
28162770 |
HEL |
viability |
GTGCAGAAAATGTGGTGACCTGG |
TPM4 |
ENSG00000167460 |
0.7242128932068603 |
[567] |
[600] |
6 |
hSpCas9 |
negative selection |
11780067 |
16088020 |
16088043 |
19 |
+ |
28162770 |
HEL |
viability |
TCTGCAGGTAGCTCGTAAGCTGG |
TPM4 |
ENSG00000167460 |
-0.6285631898170374 |
[209] |
[86] |
-4 |
hSpCas9 |
negative selection |
11780068 |
16101256 |
16101279 |
19 |
+ |
28162770 |
HEL |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
0.6941670708073598 |
[247] |
[256] |
6 |
hSpCas9 |
negative selection |
11780069 |
16086519 |
16086542 |
19 |
+ |
28162770 |
MV411 |
viability |
GGCTGACCGCAAATACGAGGAGG |
TPM4 |
ENSG00000167460 |
0.18706493280329373 |
[121] |
[116] |
1 |
hSpCas9 |
negative selection |
11949427 |
16067648 |
16067671 |
19 |
+ |
28162770 |
MV411 |
viability |
GCAGATGCTGAAGTTGGACAAGG |
TPM4 |
ENSG00000167460 |
0.23781954822117823 |
[601] |
[597] |
2 |
hSpCas9 |
negative selection |
11949428 |
16088065 |
16088088 |
19 |
+ |
28162770 |
MV411 |
viability |
GAGGGCAGAGGAGCGTGCGGAGG |
TPM4 |
ENSG00000167460 |
-0.7013371258620515 |
[82] |
[42] |
-5 |
hSpCas9 |
negative selection |
11949429 |
16081992 |
16082015 |
19 |
- |
28162770 |
MV411 |
viability |
CTCCAGCTTCTGCAGGGCCGTGG |
TPM4 |
ENSG00000167460 |
0.2553427488681216 |
[181] |
[182] |
2 |
hSpCas9 |
negative selection |
11949430 |
16093529 |
16093552 |
19 |
+ |
28162770 |
MV411 |
viability |
CCCACAGTATTCTGAAAAGGAGG |
TPM4 |
ENSG00000167460 |
0.734934242068314 |
[198] |
[278] |
6 |
hSpCas9 |
negative selection |
11949431 |
16086411 |
16086434 |
19 |
+ |
28162770 |
MV411 |
viability |
TGCTCCTTGCAGAGGAATGAAGG |
TPM4 |
ENSG00000167460 |
0.3708199662880574 |
[111] |
[121] |
3 |
hSpCas9 |
negative selection |
11949432 |
16089039 |
16089062 |
19 |
+ |
28162770 |
MV411 |
viability |
GTGCAGAAAATGTGGTGACCTGG |
TPM4 |
ENSG00000167460 |
0.6902416894673391 |
[475] |
[646] |
6 |
hSpCas9 |
negative selection |
11949433 |
16088020 |
16088043 |
19 |
+ |
28162770 |
MV411 |
viability |
TCTGCAGGTAGCTCGTAAGCTGG |
TPM4 |
ENSG00000167460 |
0.9054635136936546 |
[153] |
[242] |
7 |
hSpCas9 |
negative selection |
11949434 |
16101256 |
16101279 |
19 |
+ |
28162770 |
MV411 |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
-0.49232667673610425 |
[171] |
[102] |
-4 |
hSpCas9 |
negative selection |
11949435 |
16086519 |
16086542 |
19 |
+ |
28162770 |
MONOMAC1 |
viability |
GGCTGACCGCAAATACGAGGAGG |
TPM4 |
ENSG00000167460 |
-0.23656521124619134 |
[73] |
[71] |
-2 |
hSpCas9 |
negative selection |
12118793 |
16067648 |
16067671 |
19 |
+ |
28162770 |
MONOMAC1 |
viability |
GCAGATGCTGAAGTTGGACAAGG |
TPM4 |
ENSG00000167460 |
0.42087607546288885 |
[403] |
[619] |
4 |
hSpCas9 |
negative selection |
12118794 |
16088065 |
16088088 |
19 |
+ |
28162770 |
MONOMAC1 |
viability |
GAGGGCAGAGGAGCGTGCGGAGG |
TPM4 |
ENSG00000167460 |
-1.2932521623188566 |
[61] |
[28] |
-7 |
hSpCas9 |
negative selection |
12118795 |
16081992 |
16082015 |
19 |
- |
28162770 |
MONOMAC1 |
viability |
CTCCAGCTTCTGCAGGGCCGTGG |
TPM4 |
ENSG00000167460 |
0.04327748227415673 |
[159] |
[188] |
0 |
hSpCas9 |
negative selection |
12118796 |
16093529 |
16093552 |
19 |
+ |
28162770 |
MONOMAC1 |
viability |
CCCACAGTATTCTGAAAAGGAGG |
TPM4 |
ENSG00000167460 |
-0.09012164314304183 |
[181] |
[195] |
-1 |
hSpCas9 |
negative selection |
12118797 |
16086411 |
16086434 |
19 |
+ |
28162770 |
MONOMAC1 |
viability |
TGCTCCTTGCAGAGGAATGAAGG |
TPM4 |
ENSG00000167460 |
-0.12992265120101676 |
[83] |
[87] |
-1 |
hSpCas9 |
negative selection |
12118798 |
16089039 |
16089062 |
19 |
+ |
28162770 |
MONOMAC1 |
viability |
GTGCAGAAAATGTGGTGACCTGG |
TPM4 |
ENSG00000167460 |
0.1963055811199712 |
[267] |
[351] |
2 |
hSpCas9 |
negative selection |
12118799 |
16088020 |
16088043 |
19 |
+ |
28162770 |
MONOMAC1 |
viability |
TCTGCAGGTAGCTCGTAAGCTGG |
TPM4 |
ENSG00000167460 |
1.4836846364670333 |
[67] |
[217] |
9 |
hSpCas9 |
negative selection |
12118800 |
16101256 |
16101279 |
19 |
+ |
28162770 |
MONOMAC1 |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
1.2857452588551244 |
[116] |
[326] |
9 |
hSpCas9 |
negative selection |
12118801 |
16086519 |
16086542 |
19 |
+ |
28162770 |
OCIAML2 |
viability |
GGCTGACCGCAAATACGAGGAGG |
TPM4 |
ENSG00000167460 |
0.790635487738577 |
[16] |
[162] |
7 |
hSpCas9 |
negative selection |
12288159 |
16067648 |
16067671 |
19 |
+ |
28162770 |
OCIAML2 |
viability |
GCAGATGCTGAAGTTGGACAAGG |
TPM4 |
ENSG00000167460 |
0.5110383519855815 |
[98] |
[781] |
5 |
hSpCas9 |
negative selection |
12288160 |
16088065 |
16088088 |
19 |
+ |
28162770 |
OCIAML2 |
viability |
GAGGGCAGAGGAGCGTGCGGAGG |
TPM4 |
ENSG00000167460 |
1.4648299225631283 |
[9] |
[152] |
9 |
hSpCas9 |
negative selection |
12288161 |
16081992 |
16082015 |
19 |
- |
28162770 |
OCIAML2 |
viability |
CTCCAGCTTCTGCAGGGCCGTGG |
TPM4 |
ENSG00000167460 |
0.5059112019338499 |
[30] |
[243] |
5 |
hSpCas9 |
negative selection |
12288162 |
16093529 |
16093552 |
19 |
+ |
28162770 |
OCIAML2 |
viability |
CCCACAGTATTCTGAAAAGGAGG |
TPM4 |
ENSG00000167460 |
0.2082328143604767 |
[56] |
[364] |
2 |
hSpCas9 |
negative selection |
12288163 |
16086411 |
16086434 |
19 |
+ |
28162770 |
OCIAML2 |
viability |
TGCTCCTTGCAGAGGAATGAAGG |
TPM4 |
ENSG00000167460 |
0.4642751465359538 |
[16] |
[129] |
4 |
hSpCas9 |
negative selection |
12288164 |
16089039 |
16089062 |
19 |
+ |
28162770 |
OCIAML2 |
viability |
GTGCAGAAAATGTGGTGACCTGG |
TPM4 |
ENSG00000167460 |
0.38368085524499085 |
[94] |
[686] |
3 |
hSpCas9 |
negative selection |
12288165 |
16088020 |
16088043 |
19 |
+ |
28162770 |
OCIAML2 |
viability |
TCTGCAGGTAGCTCGTAAGCTGG |
TPM4 |
ENSG00000167460 |
1.1440800188730469 |
[19] |
[244] |
9 |
hSpCas9 |
negative selection |
12288166 |
16101256 |
16101279 |
19 |
+ |
28162770 |
OCIAML2 |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
-0.31682448916312583 |
[39] |
[177] |
-3 |
hSpCas9 |
negative selection |
12288167 |
16086519 |
16086542 |
19 |
+ |
28162770 |
OCIAML3 |
viability |
GGCTGACCGCAAATACGAGGAGG |
TPM4 |
ENSG00000167460 |
-0.3022415159470533 |
[28] |
[70] |
-2 |
hSpCas9 |
negative selection |
12457525 |
16067648 |
16067671 |
19 |
+ |
28162770 |
OCIAML3 |
viability |
GCAGATGCTGAAGTTGGACAAGG |
TPM4 |
ENSG00000167460 |
0.09289764937914402 |
[172] |
[556] |
0 |
hSpCas9 |
negative selection |
12457526 |
16088065 |
16088088 |
19 |
+ |
28162770 |
OCIAML3 |
viability |
GAGGGCAGAGGAGCGTGCGGAGG |
TPM4 |
ENSG00000167460 |
0.9055633691663484 |
[28] |
[163] |
7 |
hSpCas9 |
negative selection |
12457527 |
16081992 |
16082015 |
19 |
- |
28162770 |
OCIAML3 |
viability |
CTCCAGCTTCTGCAGGGCCGTGG |
TPM4 |
ENSG00000167460 |
0.6439816360633032 |
[45] |
[216] |
6 |
hSpCas9 |
negative selection |
12457528 |
16093529 |
16093552 |
19 |
+ |
28162770 |
OCIAML3 |
viability |
CCCACAGTATTCTGAAAAGGAGG |
TPM4 |
ENSG00000167460 |
-0.1070202991663044 |
[65] |
[184] |
-1 |
hSpCas9 |
negative selection |
12457529 |
16086411 |
16086434 |
19 |
+ |
28162770 |
OCIAML3 |
viability |
TGCTCCTTGCAGAGGAATGAAGG |
TPM4 |
ENSG00000167460 |
2.324855596950431 |
[23] |
[362] |
9 |
hSpCas9 |
negative selection |
12457530 |
16089039 |
16089062 |
19 |
+ |
28162770 |
OCIAML3 |
viability |
GTGCAGAAAATGTGGTGACCTGG |
TPM4 |
ENSG00000167460 |
-0.4637512543728216 |
[126] |
[277] |
-4 |
hSpCas9 |
negative selection |
12457531 |
16088020 |
16088043 |
19 |
+ |
28162770 |
OCIAML3 |
viability |
TCTGCAGGTAGCTCGTAAGCTGG |
TPM4 |
ENSG00000167460 |
-0.20009343261107337 |
[42] |
[112] |
-1 |
hSpCas9 |
negative selection |
12457532 |
16101256 |
16101279 |
19 |
+ |
28162770 |
OCIAML3 |
viability |
CTCACCAGAGAAACTTGCCCAGG |
TPM4 |
ENSG00000167460 |
0.2338113842931564 |
[39] |
[141] |
2 |
hSpCas9 |
negative selection |
12457533 |