| 48465035 |
48465058 |
3 |
+ |
26472758 |
Jiyoye |
viability |
GGGGTCAGCATGCTCATCCGAGG |
TREX1 |
ENSG00000213689 |
-2.840752131937712 |
[132] |
[13] |
-9 |
hSpCas9 |
negative selection |
12911 |
48467523 |
48467546 |
3 |
- |
26472758 |
Jiyoye |
viability |
AGGATGGCCAGCAGACCCAGTGG |
TREX1 |
ENSG00000213689 |
0.5327062635897323 |
[65] |
[71] |
4 |
hSpCas9 |
negative selection |
171775 |
48466766 |
48466789 |
3 |
+ |
26472758 |
Jiyoye |
viability |
GGCTGTCCACAGATGTGCCCTGG |
TREX1 |
ENSG00000213689 |
0.26777232484045693 |
[151] |
[137] |
2 |
hSpCas9 |
negative selection |
171776 |
48466812 |
48466835 |
3 |
- |
26472758 |
Jiyoye |
viability |
GGTGGAGGAACTGTGGGAGGTGG |
TREX1 |
ENSG00000213689 |
-0.8703585940230354 |
[159] |
[65] |
-6 |
hSpCas9 |
negative selection |
171777 |
48466833 |
48466856 |
3 |
- |
26472758 |
Jiyoye |
viability |
AGCTTGTCTACCACACGCGGTGG |
TREX1 |
ENSG00000213689 |
0.8477479728918548 |
[41] |
[56] |
6 |
hSpCas9 |
negative selection |
171778 |
48467388 |
48467411 |
3 |
- |
26472758 |
Jiyoye |
viability |
GCAGTGGTTGTGACAGCAGATGG |
TREX1 |
ENSG00000213689 |
0.1549016705098638 |
[373] |
[313] |
1 |
hSpCas9 |
negative selection |
171779 |
48467086 |
48467109 |
3 |
- |
26472758 |
Jiyoye |
viability |
GAAGGCACCATCCAGAGCACTGG |
TREX1 |
ENSG00000213689 |
0.11766876431088853 |
[131] |
[107] |
0 |
hSpCas9 |
negative selection |
171780 |
48467104 |
48467127 |
3 |
- |
26472758 |
Jiyoye |
viability |
AGTGATGCTATCCACACAGAAGG |
TREX1 |
ENSG00000213689 |
0.46783816341249757 |
[162] |
[169] |
3 |
hSpCas9 |
negative selection |
171781 |
48467284 |
48467307 |
3 |
+ |
26472758 |
Jiyoye |
viability |
GGAGACCACAGGCCCTGCTGCGG |
TREX1 |
ENSG00000213689 |
-0.0831502450772076 |
[117] |
[83] |
0 |
hSpCas9 |
negative selection |
171782 |
48467404 |
48467427 |
3 |
- |
26472758 |
Jiyoye |
viability |
GGTTGTGGCCAGGTGTGCAGTGG |
TREX1 |
ENSG00000213689 |
-0.23980884582266726 |
[201] |
[128] |
-2 |
hSpCas9 |
negative selection |
171783 |
48466736 |
48466759 |
3 |
- |
26472758 |
Jiyoye |
viability |
ACAGCTCCGTGACCTTGGGCTGG |
TREX1 |
ENSG00000213689 |
0.12668000560585724 |
[265] |
[218] |
1 |
hSpCas9 |
negative selection |
171784 |
48465035 |
48465058 |
3 |
+ |
26472758 |
KBM7 |
viability |
GGGGTCAGCATGCTCATCCGAGG |
TREX1 |
ENSG00000213689 |
-1.7105660817208612 |
[251,174] |
[15,42] |
-8 |
hSpCas9 |
negative selection |
204029 |
48467523 |
48467546 |
3 |
- |
26472758 |
KBM7 |
viability |
AGGATGGCCAGCAGACCCAGTGG |
TREX1 |
ENSG00000213689 |
0.16922227032184062 |
[460,253] |
[262,113] |
1 |
hSpCas9 |
negative selection |
362893 |
48466766 |
48466789 |
3 |
+ |
26472758 |
KBM7 |
viability |
GGCTGTCCACAGATGTGCCCTGG |
TREX1 |
ENSG00000213689 |
0.3990457182650115 |
[710,590] |
[471,338] |
4 |
hSpCas9 |
negative selection |
362894 |
48466812 |
48466835 |
3 |
- |
26472758 |
KBM7 |
viability |
GGTGGAGGAACTGTGGGAGGTGG |
TREX1 |
ENSG00000213689 |
-1.824916730614853 |
[675,403] |
[66,72] |
-8 |
hSpCas9 |
negative selection |
362895 |
48466833 |
48466856 |
3 |
- |
26472758 |
KBM7 |
viability |
AGCTTGTCTACCACACGCGGTGG |
TREX1 |
ENSG00000213689 |
0.2864906800113464 |
[289,265] |
[168,150] |
3 |
hSpCas9 |
negative selection |
362896 |
48467388 |
48467411 |
3 |
- |
26472758 |
KBM7 |
viability |
GCAGTGGTTGTGACAGCAGATGG |
TREX1 |
ENSG00000213689 |
0.029062198734766342 |
[1323,1154] |
[717,481] |
0 |
hSpCas9 |
negative selection |
362897 |
48467086 |
48467109 |
3 |
- |
26472758 |
KBM7 |
viability |
GAAGGCACCATCCAGAGCACTGG |
TREX1 |
ENSG00000213689 |
-0.40714308701292423 |
[937,991] |
[338,349] |
-4 |
hSpCas9 |
negative selection |
362898 |
48467104 |
48467127 |
3 |
- |
26472758 |
KBM7 |
viability |
AGTGATGCTATCCACACAGAAGG |
TREX1 |
ENSG00000213689 |
-0.05504147299054846 |
[705,647] |
[248,357] |
0 |
hSpCas9 |
negative selection |
362899 |
48467284 |
48467307 |
3 |
+ |
26472758 |
KBM7 |
viability |
GGAGACCACAGGCCCTGCTGCGG |
TREX1 |
ENSG00000213689 |
-0.7522978519261713 |
[584,427] |
[161,119] |
-6 |
hSpCas9 |
negative selection |
362900 |
48467404 |
48467427 |
3 |
- |
26472758 |
KBM7 |
viability |
GGTTGTGGCCAGGTGTGCAGTGG |
TREX1 |
ENSG00000213689 |
0.24578695480403911 |
[538,601] |
[426,226] |
2 |
hSpCas9 |
negative selection |
362901 |
48466736 |
48466759 |
3 |
- |
26472758 |
KBM7 |
viability |
ACAGCTCCGTGACCTTGGGCTGG |
TREX1 |
ENSG00000213689 |
0.27461790554737253 |
[1507,1187] |
[956,585] |
3 |
hSpCas9 |
negative selection |
362902 |
48465035 |
48465058 |
3 |
+ |
26472758 |
Raji |
viability |
GGGGTCAGCATGCTCATCCGAGG |
TREX1 |
ENSG00000213689 |
-1.390867332154226 |
[112] |
[9] |
-7 |
hSpCas9 |
negative selection |
395147 |
48467523 |
48467546 |
3 |
- |
26472758 |
Raji |
viability |
AGGATGGCCAGCAGACCCAGTGG |
TREX1 |
ENSG00000213689 |
0.8178769181786149 |
[153] |
[62] |
7 |
hSpCas9 |
negative selection |
554011 |
48466766 |
48466789 |
3 |
+ |
26472758 |
Raji |
viability |
GGCTGTCCACAGATGTGCCCTGG |
TREX1 |
ENSG00000213689 |
-0.25963244904230076 |
[324] |
[62] |
-2 |
hSpCas9 |
negative selection |
554012 |
48466812 |
48466835 |
3 |
- |
26472758 |
Raji |
viability |
GGTGGAGGAACTGTGGGAGGTGG |
TREX1 |
ENSG00000213689 |
-1.10436164176334 |
[314] |
[33] |
-7 |
hSpCas9 |
negative selection |
554013 |
48466833 |
48466856 |
3 |
- |
26472758 |
Raji |
viability |
AGCTTGTCTACCACACGCGGTGG |
TREX1 |
ENSG00000213689 |
-1.1538817776071388 |
[162] |
[16] |
-7 |
hSpCas9 |
negative selection |
554014 |
48467388 |
48467411 |
3 |
- |
26472758 |
Raji |
viability |
GCAGTGGTTGTGACAGCAGATGG |
TREX1 |
ENSG00000213689 |
0.49022221226429497 |
[588] |
[191] |
4 |
hSpCas9 |
negative selection |
554015 |
48467086 |
48467109 |
3 |
- |
26472758 |
Raji |
viability |
GAAGGCACCATCCAGAGCACTGG |
TREX1 |
ENSG00000213689 |
0.18311086153684447 |
[333] |
[87] |
1 |
hSpCas9 |
negative selection |
554016 |
48467104 |
48467127 |
3 |
- |
26472758 |
Raji |
viability |
AGTGATGCTATCCACACAGAAGG |
TREX1 |
ENSG00000213689 |
0.011805875391368625 |
[311] |
[72] |
0 |
hSpCas9 |
negative selection |
554017 |
48467284 |
48467307 |
3 |
+ |
26472758 |
Raji |
viability |
GGAGACCACAGGCCCTGCTGCGG |
TREX1 |
ENSG00000213689 |
-0.2791975178560163 |
[250] |
[47] |
-2 |
hSpCas9 |
negative selection |
554018 |
48467404 |
48467427 |
3 |
- |
26472758 |
Raji |
viability |
GGTTGTGGCCAGGTGTGCAGTGG |
TREX1 |
ENSG00000213689 |
-0.5330740779392604 |
[317] |
[50] |
-4 |
hSpCas9 |
negative selection |
554019 |
48466736 |
48466759 |
3 |
- |
26472758 |
Raji |
viability |
ACAGCTCCGTGACCTTGGGCTGG |
TREX1 |
ENSG00000213689 |
-0.7220283075572018 |
[724] |
[101] |
-5 |
hSpCas9 |
negative selection |
554020 |
48465035 |
48465058 |
3 |
+ |
26472758 |
K562 |
viability |
GGGGTCAGCATGCTCATCCGAGG |
TREX1 |
ENSG00000213689 |
-5.127140134945516 |
[206] |
[4] |
-9 |
hSpCas9 |
negative selection |
586265 |
48467523 |
48467546 |
3 |
- |
26472758 |
K562 |
viability |
AGGATGGCCAGCAGACCCAGTGG |
TREX1 |
ENSG00000213689 |
1.7489625459323053 |
[165] |
[470] |
9 |
hSpCas9 |
negative selection |
745129 |
48466766 |
48466789 |
3 |
+ |
26472758 |
K562 |
viability |
GGCTGTCCACAGATGTGCCCTGG |
TREX1 |
ENSG00000213689 |
-0.6066186332085542 |
[569] |
[315] |
-4 |
hSpCas9 |
negative selection |
745130 |
48466812 |
48466835 |
3 |
- |
26472758 |
K562 |
viability |
GGTGGAGGAACTGTGGGAGGTGG |
TREX1 |
ENSG00000213689 |
-2.355131309277756 |
[496] |
[81] |
-8 |
hSpCas9 |
negative selection |
745131 |
48466833 |
48466856 |
3 |
- |
26472758 |
K562 |
viability |
AGCTTGTCTACCACACGCGGTGG |
TREX1 |
ENSG00000213689 |
1.1125532797924729 |
[165] |
[302] |
8 |
hSpCas9 |
negative selection |
745132 |
48467388 |
48467411 |
3 |
- |
26472758 |
K562 |
viability |
GCAGTGGTTGTGACAGCAGATGG |
TREX1 |
ENSG00000213689 |
0.16896649923698148 |
[1098] |
[1042] |
1 |
hSpCas9 |
negative selection |
745133 |
48467086 |
48467109 |
3 |
- |
26472758 |
K562 |
viability |
GAAGGCACCATCCAGAGCACTGG |
TREX1 |
ENSG00000213689 |
-0.7048704520000197 |
[586] |
[303] |
-4 |
hSpCas9 |
negative selection |
745134 |
48467104 |
48467127 |
3 |
- |
26472758 |
K562 |
viability |
AGTGATGCTATCCACACAGAAGG |
TREX1 |
ENSG00000213689 |
-0.6323098974318193 |
[638] |
[347] |
-4 |
hSpCas9 |
negative selection |
745135 |
48467284 |
48467307 |
3 |
+ |
26472758 |
K562 |
viability |
GGAGACCACAGGCCCTGCTGCGG |
TREX1 |
ENSG00000213689 |
-0.7848755791275912 |
[397] |
[194] |
-4 |
hSpCas9 |
negative selection |
745136 |
48467404 |
48467427 |
3 |
- |
26472758 |
K562 |
viability |
GGTTGTGGCCAGGTGTGCAGTGG |
TREX1 |
ENSG00000213689 |
-0.999919584457442 |
[551] |
[232] |
-5 |
hSpCas9 |
negative selection |
745137 |
48466736 |
48466759 |
3 |
- |
26472758 |
K562 |
viability |
ACAGCTCCGTGACCTTGGGCTGG |
TREX1 |
ENSG00000213689 |
-0.762812841564629 |
[1199] |
[596] |
-4 |
hSpCas9 |
negative selection |
745138 |
48466576 |
48466599 |
3 |
- |
26627737 |
DLD1 |
viability |
GCCCAGTGTTAAGATCCGAAGGG |
TREX1 |
ENSG00000213689 |
0.0251297854813908 |
[456] |
[186,129,121] |
0 |
hSpCas9 |
negative selection |
822086 |
48466577 |
48466600 |
3 |
- |
26627737 |
DLD1 |
viability |
TGCCCAGTGTTAAGATCCGAAGG |
TREX1 |
ENSG00000213689 |
0.06327893199335399 |
[562] |
[209,188,156] |
0 |
hSpCas9 |
negative selection |
822087 |
48467050 |
48467073 |
3 |
- |
26627737 |
DLD1 |
viability |
AGCCAGCTCTGCTTGGAGCAGGG |
TREX1 |
ENSG00000213689 |
-0.8346122317013569 |
[1321] |
[266,185,238] |
-7 |
hSpCas9 |
negative selection |
822088 |
48467414 |
48467437 |
3 |
- |
26627737 |
DLD1 |
viability |
TAGTGTTCCTGGTTGTGGCCAGG |
TREX1 |
ENSG00000213689 |
1.2488657464743984 |
[210] |
[89,177,196] |
9 |
hSpCas9 |
negative selection |
822089 |
48467539 |
48467562 |
3 |
- |
26627737 |
DLD1 |
viability |
GGCTACTGCCAAGGTCAGGATGG |
TREX1 |
ENSG00000213689 |
1.7591742210926578 |
[150] |
[172,228,90] |
9 |
hSpCas9 |
negative selection |
822090 |
48466576 |
48466599 |
3 |
- |
26627737 |
GBM cells |
viability after 5 days |
GCCCAGTGTTAAGATCCGAAGGG |
TREX1 |
ENSG00000213689 |
0.050031607737813455 |
[325] |
[179,181] |
0 |
hSpCas9 |
negative selection |
904401 |
48466577 |
48466600 |
3 |
- |
26627737 |
GBM cells |
viability after 5 days |
TGCCCAGTGTTAAGATCCGAAGG |
TREX1 |
ENSG00000213689 |
-0.25615552160714783 |
[313] |
[148,132] |
-4 |
hSpCas9 |
negative selection |
904402 |
48467050 |
48467073 |
3 |
- |
26627737 |
GBM cells |
viability after 5 days |
AGCCAGCTCTGCTTGGAGCAGGG |
TREX1 |
ENSG00000213689 |
0.33977514962248284 |
[262] |
[158,197] |
5 |
hSpCas9 |
negative selection |
904403 |
48467414 |
48467437 |
3 |
- |
26627737 |
GBM cells |
viability after 5 days |
TAGTGTTCCTGGTTGTGGCCAGG |
TREX1 |
ENSG00000213689 |
0.2780668384659979 |
[172] |
[128,95] |
4 |
hSpCas9 |
negative selection |
904404 |
48467539 |
48467562 |
3 |
- |
26627737 |
GBM cells |
viability after 5 days |
GGCTACTGCCAAGGTCAGGATGG |
TREX1 |
ENSG00000213689 |
0.396940738835561 |
[113] |
[71,88] |
6 |
hSpCas9 |
negative selection |
904405 |
48466576 |
48466599 |
3 |
- |
26627737 |
GBM cells |
viability after 13 days |
GCCCAGTGTTAAGATCCGAAGGG |
TREX1 |
ENSG00000213689 |
-0.5312866218753439 |
[325] |
[144,103] |
-6 |
hSpCas9 |
negative selection |
986716 |
48466577 |
48466600 |
3 |
- |
26627737 |
GBM cells |
viability after 13 days |
TGCCCAGTGTTAAGATCCGAAGG |
TREX1 |
ENSG00000213689 |
-0.5393449597002103 |
[313] |
[87,140] |
-6 |
hSpCas9 |
negative selection |
986717 |
48467050 |
48467073 |
3 |
- |
26627737 |
GBM cells |
viability after 13 days |
AGCCAGCTCTGCTTGGAGCAGGG |
TREX1 |
ENSG00000213689 |
0.5168569428644517 |
[262] |
[212,196] |
6 |
hSpCas9 |
negative selection |
986718 |
48467414 |
48467437 |
3 |
- |
26627737 |
GBM cells |
viability after 13 days |
TAGTGTTCCTGGTTGTGGCCAGG |
TREX1 |
ENSG00000213689 |
0.18745400530815348 |
[172] |
[91,118] |
2 |
hSpCas9 |
negative selection |
986719 |
48467539 |
48467562 |
3 |
- |
26627737 |
GBM cells |
viability after 13 days |
GGCTACTGCCAAGGTCAGGATGG |
TREX1 |
ENSG00000213689 |
0.21899076927994277 |
[113] |
[55,84] |
3 |
hSpCas9 |
negative selection |
986720 |
48466576 |
48466599 |
3 |
- |
26627737 |
GBM cells |
viability after 21 days |
GCCCAGTGTTAAGATCCGAAGGG |
TREX1 |
ENSG00000213689 |
-0.4903246533699482 |
[325] |
[135,116] |
-4 |
hSpCas9 |
negative selection |
1069031 |
48466577 |
48466600 |
3 |
- |
26627737 |
GBM cells |
viability after 21 days |
TGCCCAGTGTTAAGATCCGAAGG |
TREX1 |
ENSG00000213689 |
-0.3283397087186731 |
[313] |
[138,132] |
-3 |
hSpCas9 |
negative selection |
1069032 |
48467050 |
48467073 |
3 |
- |
26627737 |
GBM cells |
viability after 21 days |
AGCCAGCTCTGCTTGGAGCAGGG |
TREX1 |
ENSG00000213689 |
0.5795567255477382 |
[262] |
[212,213] |
6 |
hSpCas9 |
negative selection |
1069033 |
48467414 |
48467437 |
3 |
- |
26627737 |
GBM cells |
viability after 21 days |
TAGTGTTCCTGGTTGTGGCCAGG |
TREX1 |
ENSG00000213689 |
0.41382385304684877 |
[172] |
[131,118] |
4 |
hSpCas9 |
negative selection |
1069034 |
48467539 |
48467562 |
3 |
- |
26627737 |
GBM cells |
viability after 21 days |
GGCTACTGCCAAGGTCAGGATGG |
TREX1 |
ENSG00000213689 |
0.3732733108957753 |
[113] |
[74,84] |
4 |
hSpCas9 |
negative selection |
1069035 |
48466576 |
48466599 |
3 |
- |
26627737 |
RPE1 |
viability after 9 days |
GCCCAGTGTTAAGATCCGAAGGG |
TREX1 |
ENSG00000213689 |
0.4125024312032793 |
[1079] |
[494,391] |
3 |
hSpCas9 |
negative selection |
1151346 |
48466577 |
48466600 |
3 |
- |
26627737 |
RPE1 |
viability after 9 days |
TGCCCAGTGTTAAGATCCGAAGG |
TREX1 |
ENSG00000213689 |
-0.8809608629256345 |
[1616] |
[311,226] |
-6 |
hSpCas9 |
negative selection |
1151347 |
48467050 |
48467073 |
3 |
- |
26627737 |
RPE1 |
viability after 9 days |
AGCCAGCTCTGCTTGGAGCAGGG |
TREX1 |
ENSG00000213689 |
-0.6268471353529768 |
[1806] |
[323,420] |
-4 |
hSpCas9 |
negative selection |
1151348 |
48467414 |
48467437 |
3 |
- |
26627737 |
RPE1 |
viability after 9 days |
TAGTGTTCCTGGTTGTGGCCAGG |
TREX1 |
ENSG00000213689 |
1.7135548873478386 |
[230] |
[265,199] |
8 |
hSpCas9 |
negative selection |
1151349 |
48467539 |
48467562 |
3 |
- |
26627737 |
RPE1 |
viability after 9 days |
GGCTACTGCCAAGGTCAGGATGG |
TREX1 |
ENSG00000213689 |
-0.6743988156557985 |
[401] |
[101,48] |
-5 |
hSpCas9 |
negative selection |
1151350 |
48466576 |
48466599 |
3 |
- |
26627737 |
RPE1 |
viability after 12 days |
GCCCAGTGTTAAGATCCGAAGGG |
TREX1 |
ENSG00000213689 |
0.35745702626159975 |
[1079] |
[379,362] |
2 |
hSpCas9 |
negative selection |
1233661 |
48466577 |
48466600 |
3 |
- |
26627737 |
RPE1 |
viability after 12 days |
TGCCCAGTGTTAAGATCCGAAGG |
TREX1 |
ENSG00000213689 |
-0.8861248405751798 |
[1616] |
[219,250] |
-6 |
hSpCas9 |
negative selection |
1233662 |
48467050 |
48467073 |
3 |
- |
26627737 |
RPE1 |
viability after 12 days |
AGCCAGCTCTGCTTGGAGCAGGG |
TREX1 |
ENSG00000213689 |
-0.4386478520928627 |
[1806] |
[415,296] |
-3 |
hSpCas9 |
negative selection |
1233663 |
48467414 |
48467437 |
3 |
- |
26627737 |
RPE1 |
viability after 12 days |
TAGTGTTCCTGGTTGTGGCCAGG |
TREX1 |
ENSG00000213689 |
1.6140010156519264 |
[230] |
[188,190] |
8 |
hSpCas9 |
negative selection |
1233664 |
48467539 |
48467562 |
3 |
- |
26627737 |
RPE1 |
viability after 12 days |
GGCTACTGCCAAGGTCAGGATGG |
TREX1 |
ENSG00000213689 |
-0.5382637000466453 |
[401] |
[18,132] |
-4 |
hSpCas9 |
negative selection |
1233665 |
48466576 |
48466599 |
3 |
- |
26627737 |
RPE1 |
viability after 15 days |
GCCCAGTGTTAAGATCCGAAGGG |
TREX1 |
ENSG00000213689 |
0.08484372317893124 |
[1079] |
[266,378] |
0 |
hSpCas9 |
negative selection |
1315976 |
48466577 |
48466600 |
3 |
- |
26627737 |
RPE1 |
viability after 15 days |
TGCCCAGTGTTAAGATCCGAAGG |
TREX1 |
ENSG00000213689 |
-0.9400023993907785 |
[1616] |
[242,233] |
-5 |
hSpCas9 |
negative selection |
1315977 |
48467050 |
48467073 |
3 |
- |
26627737 |
RPE1 |
viability after 15 days |
AGCCAGCTCTGCTTGGAGCAGGG |
TREX1 |
ENSG00000213689 |
-0.6069279754187604 |
[1806] |
[412,260] |
-4 |
hSpCas9 |
negative selection |
1315978 |
48467414 |
48467437 |
3 |
- |
26627737 |
RPE1 |
viability after 15 days |
TAGTGTTCCTGGTTGTGGCCAGG |
TREX1 |
ENSG00000213689 |
1.7199071689472942 |
[230] |
[228,201] |
8 |
hSpCas9 |
negative selection |
1315979 |
48467539 |
48467562 |
3 |
- |
26627737 |
RPE1 |
viability after 15 days |
GGCTACTGCCAAGGTCAGGATGG |
TREX1 |
ENSG00000213689 |
0.20747994959915195 |
[401] |
[85,174] |
1 |
hSpCas9 |
negative selection |
1315980 |
48466576 |
48466599 |
3 |
- |
26627737 |
RPE1 |
viability after 18 days |
GCCCAGTGTTAAGATCCGAAGGG |
TREX1 |
ENSG00000213689 |
0.03337426563506124 |
[1079] |
[218,382] |
0 |
hSpCas9 |
negative selection |
1398291 |
48466577 |
48466600 |
3 |
- |
26627737 |
RPE1 |
viability after 18 days |
TGCCCAGTGTTAAGATCCGAAGG |
TREX1 |
ENSG00000213689 |
-1.1948018246289291 |
[1616] |
[106,279] |
-6 |
hSpCas9 |
negative selection |
1398292 |
48467050 |
48467073 |
3 |
- |
26627737 |
RPE1 |
viability after 18 days |
AGCCAGCTCTGCTTGGAGCAGGG |
TREX1 |
ENSG00000213689 |
-0.9328943676038264 |
[1806] |
[238,272] |
-5 |
hSpCas9 |
negative selection |
1398293 |
48467414 |
48467437 |
3 |
- |
26627737 |
RPE1 |
viability after 18 days |
TAGTGTTCCTGGTTGTGGCCAGG |
TREX1 |
ENSG00000213689 |
1.6676901681872713 |
[230] |
[257,133] |
8 |
hSpCas9 |
negative selection |
1398294 |
48467539 |
48467562 |
3 |
- |
26627737 |
RPE1 |
viability after 18 days |
GGCTACTGCCAAGGTCAGGATGG |
TREX1 |
ENSG00000213689 |
0.1368776570853516 |
[401] |
[10,234] |
0 |
hSpCas9 |
negative selection |
1398295 |
48466576 |
48466599 |
3 |
- |
26627737 |
HeLa |
viability after 8 days |
GCCCAGTGTTAAGATCCGAAGGG |
TREX1 |
ENSG00000213689 |
0.39256759421371806 |
[426] |
[257,279,199] |
3 |
hSpCas9 |
negative selection |
1480606 |
48466577 |
48466600 |
3 |
- |
26627737 |
HeLa |
viability after 8 days |
TGCCCAGTGTTAAGATCCGAAGG |
TREX1 |
ENSG00000213689 |
0.7496445068660837 |
[305] |
[211,306,154] |
6 |
hSpCas9 |
negative selection |
1480607 |
48467050 |
48467073 |
3 |
- |
26627737 |
HeLa |
viability after 8 days |
AGCCAGCTCTGCTTGGAGCAGGG |
TREX1 |
ENSG00000213689 |
0.6443280863962093 |
[275] |
[237,100,231] |
5 |
hSpCas9 |
negative selection |
1480608 |
48467414 |
48467437 |
3 |
- |
26627737 |
HeLa |
viability after 8 days |
TAGTGTTCCTGGTTGTGGCCAGG |
TREX1 |
ENSG00000213689 |
0.3270690363012929 |
[257] |
[169,148,111] |
3 |
hSpCas9 |
negative selection |
1480609 |
48467539 |
48467562 |
3 |
- |
26627737 |
HeLa |
viability after 8 days |
GGCTACTGCCAAGGTCAGGATGG |
TREX1 |
ENSG00000213689 |
-0.9239787937421441 |
[369] |
[55,118,73] |
-7 |
hSpCas9 |
negative selection |
1480610 |
48466576 |
48466599 |
3 |
- |
26627737 |
HeLa |
viability after 12 days |
GCCCAGTGTTAAGATCCGAAGGG |
TREX1 |
ENSG00000213689 |
0.32697308074886494 |
[426] |
[407,140,128] |
3 |
hSpCas9 |
negative selection |
1562921 |
48466577 |
48466600 |
3 |
- |
26627737 |
HeLa |
viability after 12 days |
TGCCCAGTGTTAAGATCCGAAGG |
TREX1 |
ENSG00000213689 |
0.9511734548990801 |
[305] |
[309,153,280] |
7 |
hSpCas9 |
negative selection |
1562922 |
48467050 |
48467073 |
3 |
- |
26627737 |
HeLa |
viability after 12 days |
AGCCAGCTCTGCTTGGAGCAGGG |
TREX1 |
ENSG00000213689 |
1.7813316480836803 |
[275] |
[408,313,461] |
9 |
hSpCas9 |
negative selection |
1562923 |
48467414 |
48467437 |
3 |
- |
26627737 |
HeLa |
viability after 12 days |
TAGTGTTCCTGGTTGTGGCCAGG |
TREX1 |
ENSG00000213689 |
-0.12303014542284796 |
[257] |
[131,47,119] |
-1 |
hSpCas9 |
negative selection |
1562924 |
48467539 |
48467562 |
3 |
- |
26627737 |
HeLa |
viability after 12 days |
GGCTACTGCCAAGGTCAGGATGG |
TREX1 |
ENSG00000213689 |
-0.517610874349549 |
[369] |
[111,83,126] |
-4 |
hSpCas9 |
negative selection |
1562925 |
48466576 |
48466599 |
3 |
- |
26627737 |
HeLa |
viability after 15 days |
GCCCAGTGTTAAGATCCGAAGGG |
TREX1 |
ENSG00000213689 |
0.37503187494863083 |
[426] |
[260,235,174] |
3 |
hSpCas9 |
negative selection |
1645236 |
48466577 |
48466600 |
3 |
- |
26627737 |
HeLa |
viability after 15 days |
TGCCCAGTGTTAAGATCCGAAGG |
TREX1 |
ENSG00000213689 |
0.9376439517598122 |
[305] |
[250,221,242] |
7 |
hSpCas9 |
negative selection |
1645237 |
48467050 |
48467073 |
3 |
- |
26627737 |
HeLa |
viability after 15 days |
AGCCAGCTCTGCTTGGAGCAGGG |
TREX1 |
ENSG00000213689 |
1.1410579626110338 |
[275] |
[214,278,249] |
7 |
hSpCas9 |
negative selection |
1645238 |
48467414 |
48467437 |
3 |
- |
26627737 |
HeLa |
viability after 15 days |
TAGTGTTCCTGGTTGTGGCCAGG |
TREX1 |
ENSG00000213689 |
0.6910376398513797 |
[257] |
[164,110,237] |
5 |
hSpCas9 |
negative selection |
1645239 |
48467539 |
48467562 |
3 |
- |
26627737 |
HeLa |
viability after 15 days |
GGCTACTGCCAAGGTCAGGATGG |
TREX1 |
ENSG00000213689 |
-1.838253249436744 |
[369] |
[32,8,87] |
-9 |
hSpCas9 |
negative selection |
1645240 |
48466576 |
48466599 |
3 |
- |
26627737 |
HeLa |
viability after 18 days |
GCCCAGTGTTAAGATCCGAAGGG |
TREX1 |
ENSG00000213689 |
0.3669362957732385 |
[426] |
[168,199,174] |
3 |
hSpCas9 |
negative selection |
1727551 |
48466577 |
48466600 |
3 |
- |
26627737 |
HeLa |
viability after 18 days |
TGCCCAGTGTTAAGATCCGAAGG |
TREX1 |
ENSG00000213689 |
0.9584125125575949 |
[305] |
[170,188,242] |
7 |
hSpCas9 |
negative selection |
1727552 |
48467050 |
48467073 |
3 |
- |
26627737 |
HeLa |
viability after 18 days |
AGCCAGCTCTGCTTGGAGCAGGG |
TREX1 |
ENSG00000213689 |
1.1142520545858867 |
[275] |
[136,228,249] |
7 |
hSpCas9 |
negative selection |
1727553 |
48467414 |
48467437 |
3 |
- |
26627737 |
HeLa |
viability after 18 days |
TAGTGTTCCTGGTTGTGGCCAGG |
TREX1 |
ENSG00000213689 |
0.7134396305160087 |
[257] |
[118,87,237] |
5 |
hSpCas9 |
negative selection |
1727554 |
48467539 |
48467562 |
3 |
- |
26627737 |
HeLa |
viability after 18 days |
GGCTACTGCCAAGGTCAGGATGG |
TREX1 |
ENSG00000213689 |
-1.815608363453279 |
[369] |
[22,7,87] |
-9 |
hSpCas9 |
negative selection |
1727555 |
48466576 |
48466599 |
3 |
- |
26627737 |
HCT116 |
viability after 6 days |
GCCCAGTGTTAAGATCCGAAGGG |
TREX1 |
ENSG00000213689 |
0.7420811003637313 |
[602] |
[28,229] |
4 |
hSpCas9 |
negative selection |
1809866 |
48466577 |
48466600 |
3 |
- |
26627737 |
HCT116 |
viability after 6 days |
TGCCCAGTGTTAAGATCCGAAGG |
TREX1 |
ENSG00000213689 |
0.29257378907922194 |
[607] |
[225,56] |
1 |
hSpCas9 |
negative selection |
1809867 |
48467050 |
48467073 |
3 |
- |
26627737 |
HCT116 |
viability after 6 days |
AGCCAGCTCTGCTTGGAGCAGGG |
TREX1 |
ENSG00000213689 |
2.872821332858365 |
[506] |
[1355,157] |
9 |
hSpCas9 |
negative selection |
1809868 |
48467414 |
48467437 |
3 |
- |
26627737 |
HCT116 |
viability after 6 days |
TAGTGTTCCTGGTTGTGGCCAGG |
TREX1 |
ENSG00000213689 |
2.42851077993779 |
[148] |
[60,161] |
9 |
hSpCas9 |
negative selection |
1809869 |
48467539 |
48467562 |
3 |
- |
26627737 |
HCT116 |
viability after 6 days |
GGCTACTGCCAAGGTCAGGATGG |
TREX1 |
ENSG00000213689 |
0.5424431901774006 |
[658] |
[30,216] |
3 |
hSpCas9 |
negative selection |
1809870 |
48466576 |
48466599 |
3 |
- |
26627737 |
HCT116 |
viability after 8 days |
GCCCAGTGTTAAGATCCGAAGGG |
TREX1 |
ENSG00000213689 |
0.1673092302836054 |
[350] |
[181,255,212] |
2 |
hSpCas9 |
negative selection |
1892181 |
48466577 |
48466600 |
3 |
- |
26627737 |
HCT116 |
viability after 8 days |
TGCCCAGTGTTAAGATCCGAAGG |
TREX1 |
ENSG00000213689 |
-0.24160658692675044 |
[330] |
[172,124,164] |
-3 |
hSpCas9 |
negative selection |
1892182 |
48467050 |
48467073 |
3 |
- |
26627737 |
HCT116 |
viability after 8 days |
AGCCAGCTCTGCTTGGAGCAGGG |
TREX1 |
ENSG00000213689 |
0.7374446543610793 |
[293] |
[282,297,229] |
7 |
hSpCas9 |
negative selection |
1892183 |
48467414 |
48467437 |
3 |
- |
26627737 |
HCT116 |
viability after 8 days |
TAGTGTTCCTGGTTGTGGCCAGG |
TREX1 |
ENSG00000213689 |
0.12740112764418576 |
[170] |
[94,140,72] |
1 |
hSpCas9 |
negative selection |
1892184 |
48467539 |
48467562 |
3 |
- |
26627737 |
HCT116 |
viability after 8 days |
GGCTACTGCCAAGGTCAGGATGG |
TREX1 |
ENSG00000213689 |
2.0344560369597167 |
[41] |
[63,134,84] |
9 |
hSpCas9 |
negative selection |
1892185 |
48466576 |
48466599 |
3 |
- |
26627737 |
HCT116 |
viability after 9 days |
GCCCAGTGTTAAGATCCGAAGGG |
TREX1 |
ENSG00000213689 |
0.3423563253700553 |
[602] |
[54,321] |
2 |
hSpCas9 |
negative selection |
1974496 |
48466577 |
48466600 |
3 |
- |
26627737 |
HCT116 |
viability after 9 days |
TGCCCAGTGTTAAGATCCGAAGG |
TREX1 |
ENSG00000213689 |
1.0010382379741178 |
[607] |
[420,248] |
7 |
hSpCas9 |
negative selection |
1974497 |
48467050 |
48467073 |
3 |
- |
26627737 |
HCT116 |
viability after 9 days |
AGCCAGCTCTGCTTGGAGCAGGG |
TREX1 |
ENSG00000213689 |
0.5050577802637554 |
[506] |
[147,226] |
4 |
hSpCas9 |
negative selection |
1974498 |
48467414 |
48467437 |
3 |
- |
26627737 |
HCT116 |
viability after 9 days |
TAGTGTTCCTGGTTGTGGCCAGG |
TREX1 |
ENSG00000213689 |
1.5208758891693712 |
[148] |
[164,73] |
8 |
hSpCas9 |
negative selection |
1974499 |
48467539 |
48467562 |
3 |
- |
26627737 |
HCT116 |
viability after 9 days |
GGCTACTGCCAAGGTCAGGATGG |
TREX1 |
ENSG00000213689 |
-0.543615329772192 |
[658] |
[89,144] |
-4 |
hSpCas9 |
negative selection |
1974500 |
48466576 |
48466599 |
3 |
- |
26627737 |
HCT116 |
viability after 12 days |
GCCCAGTGTTAAGATCCGAAGGG |
TREX1 |
ENSG00000213689 |
0.07883183067365362 |
[350] |
[159,255,172] |
0 |
hSpCas9 |
negative selection |
2056811 |
48466577 |
48466600 |
3 |
- |
26627737 |
HCT116 |
viability after 12 days |
TGCCCAGTGTTAAGATCCGAAGG |
TREX1 |
ENSG00000213689 |
0.5772187055735476 |
[330] |
[419,156,184] |
5 |
hSpCas9 |
negative selection |
2056812 |
48467050 |
48467073 |
3 |
- |
26627737 |
HCT116 |
viability after 12 days |
AGCCAGCTCTGCTTGGAGCAGGG |
TREX1 |
ENSG00000213689 |
0.982490693595378 |
[293] |
[161,534,236] |
8 |
hSpCas9 |
negative selection |
2056813 |
48467414 |
48467437 |
3 |
- |
26627737 |
HCT116 |
viability after 12 days |
TAGTGTTCCTGGTTGTGGCCAGG |
TREX1 |
ENSG00000213689 |
0.3251781542728817 |
[170] |
[110,116,109] |
3 |
hSpCas9 |
negative selection |
2056814 |
48467539 |
48467562 |
3 |
- |
26627737 |
HCT116 |
viability after 12 days |
GGCTACTGCCAAGGTCAGGATGG |
TREX1 |
ENSG00000213689 |
1.5891471321642578 |
[41] |
[54,56,87] |
9 |
hSpCas9 |
negative selection |
2056815 |
48466576 |
48466599 |
3 |
- |
26627737 |
HCT116 |
viability after 15 days |
GCCCAGTGTTAAGATCCGAAGGG |
TREX1 |
ENSG00000213689 |
0.5122039506520611 |
[350] |
[257,321,278] |
5 |
hSpCas9 |
negative selection |
2139126 |
48466577 |
48466600 |
3 |
- |
26627737 |
HCT116 |
viability after 15 days |
TGCCCAGTGTTAAGATCCGAAGG |
TREX1 |
ENSG00000213689 |
0.08372571501461362 |
[330] |
[323,154,140] |
0 |
hSpCas9 |
negative selection |
2139127 |
48467050 |
48467073 |
3 |
- |
26627737 |
HCT116 |
viability after 15 days |
AGCCAGCTCTGCTTGGAGCAGGG |
TREX1 |
ENSG00000213689 |
0.8444369987567757 |
[293] |
[149,531,209] |
7 |
hSpCas9 |
negative selection |
2139128 |
48467414 |
48467437 |
3 |
- |
26627737 |
HCT116 |
viability after 15 days |
TAGTGTTCCTGGTTGTGGCCAGG |
TREX1 |
ENSG00000213689 |
-0.1200737099191116 |
[170] |
[78,124,65] |
-1 |
hSpCas9 |
negative selection |
2139129 |
48467539 |
48467562 |
3 |
- |
26627737 |
HCT116 |
viability after 15 days |
GGCTACTGCCAAGGTCAGGATGG |
TREX1 |
ENSG00000213689 |
1.2952307576965347 |
[41] |
[72,24,80] |
8 |
hSpCas9 |
negative selection |
2139130 |
48466576 |
48466599 |
3 |
- |
26627737 |
HCT116 |
viability after 18 days |
GCCCAGTGTTAAGATCCGAAGGG |
TREX1 |
ENSG00000213689 |
0.7057543617116697 |
[350] |
[204,265,363] |
6 |
hSpCas9 |
negative selection |
2221441 |
48466577 |
48466600 |
3 |
- |
26627737 |
HCT116 |
viability after 18 days |
TGCCCAGTGTTAAGATCCGAAGG |
TREX1 |
ENSG00000213689 |
0.5985882426772164 |
[330] |
[312,246,162] |
5 |
hSpCas9 |
negative selection |
2221442 |
48467050 |
48467073 |
3 |
- |
26627737 |
HCT116 |
viability after 18 days |
AGCCAGCTCTGCTTGGAGCAGGG |
TREX1 |
ENSG00000213689 |
0.9223763927917231 |
[293] |
[130,412,253] |
7 |
hSpCas9 |
negative selection |
2221443 |
48467414 |
48467437 |
3 |
- |
26627737 |
HCT116 |
viability after 18 days |
TAGTGTTCCTGGTTGTGGCCAGG |
TREX1 |
ENSG00000213689 |
-0.07618685348573218 |
[170] |
[44,119,66] |
0 |
hSpCas9 |
negative selection |
2221444 |
48467539 |
48467562 |
3 |
- |
26627737 |
HCT116 |
viability after 18 days |
GGCTACTGCCAAGGTCAGGATGG |
TREX1 |
ENSG00000213689 |
1.3285883448979803 |
[41] |
[85,27,39] |
8 |
hSpCas9 |
negative selection |
2221445 |
48466717 |
48466740 |
3 |
- |
24336569 |
HL60 |
viability |
CTGGGAGAAGGGCAAGCCAGTGG |
TREX1 |
ENSG00000213689 |
-0.7202493008561992 |
[1064] |
[1367] |
-6 |
hSpCas9 |
negative selection |
2303331 |
48466728 |
48466751 |
3 |
- |
24336569 |
HL60 |
viability |
GTGACCTTGGGCTGGGAGAAGGG |
TREX1 |
ENSG00000213689 |
1.2968278953378456 |
[757] |
[3940] |
8 |
hSpCas9 |
negative selection |
2303332 |
48466735 |
48466758 |
3 |
- |
24336569 |
HL60 |
viability |
CAGCTCCGTGACCTTGGGCTGGG |
TREX1 |
ENSG00000213689 |
-0.17063461030614213 |
[950] |
[1787] |
-1 |
hSpCas9 |
negative selection |
2303333 |
48466740 |
48466763 |
3 |
- |
24336569 |
HL60 |
viability |
AGGCACAGCTCCGTGACCTTGGG |
TREX1 |
ENSG00000213689 |
-0.05878371148809591 |
[851] |
[1730] |
0 |
hSpCas9 |
negative selection |
2303334 |
48466745 |
48466768 |
3 |
+ |
24336569 |
HL60 |
viability |
GGTCACGGAGCTGTGCCTGCTGG |
TREX1 |
ENSG00000213689 |
-0.11827676624662331 |
[257] |
[502] |
-1 |
hSpCas9 |
negative selection |
2303335 |
48466760 |
48466783 |
3 |
- |
24336569 |
HL60 |
viability |
CACATCTGTGGACAGCCAGCAGG |
TREX1 |
ENSG00000213689 |
-0.9796618201060368 |
[423] |
[454] |
-7 |
hSpCas9 |
negative selection |
2303336 |
48466766 |
48466789 |
3 |
+ |
24336569 |
HL60 |
viability |
GGCTGTCCACAGATGTGCCCTGG |
TREX1 |
ENSG00000213689 |
0.5221541993725838 |
[460] |
[1400] |
4 |
hSpCas9 |
negative selection |
2303337 |
48466772 |
48466795 |
3 |
- |
24336569 |
HL60 |
viability |
GGCTCTCCAGGGCACATCTGTGG |
TREX1 |
ENSG00000213689 |
-0.7530422436560338 |
[265] |
[333] |
-6 |
hSpCas9 |
negative selection |
2303338 |
48466812 |
48466835 |
3 |
- |
24336569 |
HL60 |
viability |
GGTGGAGGAACTGTGGGAGGTGG |
TREX1 |
ENSG00000213689 |
-1.5625301334233401 |
[990] |
[709] |
-8 |
hSpCas9 |
negative selection |
2303339 |
48466818 |
48466841 |
3 |
- |
24336569 |
HL60 |
viability |
CGCGGTGGTGGAGGAACTGTGGG |
TREX1 |
ENSG00000213689 |
-1.120812768104722 |
[445] |
[433] |
-7 |
hSpCas9 |
negative selection |
2303340 |
48466717 |
48466740 |
3 |
- |
24336569 |
KBM7 |
viability |
CTGGGAGAAGGGCAAGCCAGTGG |
TREX1 |
ENSG00000213689 |
-0.9473454629916445 |
[636] |
[900] |
-6 |
hSpCas9 |
negative selection |
2370508 |
48466728 |
48466751 |
3 |
- |
24336569 |
KBM7 |
viability |
GTGACCTTGGGCTGGGAGAAGGG |
TREX1 |
ENSG00000213689 |
-0.3525467479259439 |
[491] |
[1050] |
-3 |
hSpCas9 |
negative selection |
2370509 |
48466735 |
48466758 |
3 |
- |
24336569 |
KBM7 |
viability |
CAGCTCCGTGACCTTGGGCTGGG |
TREX1 |
ENSG00000213689 |
-0.045535594748242425 |
[710] |
[1878] |
0 |
hSpCas9 |
negative selection |
2370510 |
48466740 |
48466763 |
3 |
- |
24336569 |
KBM7 |
viability |
AGGCACAGCTCCGTGACCTTGGG |
TREX1 |
ENSG00000213689 |
-0.1294627156115391 |
[757] |
[1889] |
-1 |
hSpCas9 |
negative selection |
2370511 |
48466745 |
48466768 |
3 |
+ |
24336569 |
KBM7 |
viability |
GGTCACGGAGCTGTGCCTGCTGG |
TREX1 |
ENSG00000213689 |
0.5999939563692499 |
[260] |
[1078] |
5 |
hSpCas9 |
negative selection |
2370512 |
48466760 |
48466783 |
3 |
- |
24336569 |
KBM7 |
viability |
CACATCTGTGGACAGCCAGCAGG |
TREX1 |
ENSG00000213689 |
-0.9678360078822235 |
[326] |
[455] |
-6 |
hSpCas9 |
negative selection |
2370513 |
48466766 |
48466789 |
3 |
+ |
24336569 |
KBM7 |
viability |
GGCTGTCCACAGATGTGCCCTGG |
TREX1 |
ENSG00000213689 |
-0.9853987138708957 |
[571] |
[787] |
-6 |
hSpCas9 |
negative selection |
2370514 |
48466772 |
48466795 |
3 |
- |
24336569 |
KBM7 |
viability |
GGCTCTCCAGGGCACATCTGTGG |
TREX1 |
ENSG00000213689 |
-0.5112378337712002 |
[138] |
[265] |
-4 |
hSpCas9 |
negative selection |
2370515 |
48466812 |
48466835 |
3 |
- |
24336569 |
KBM7 |
viability |
GGTGGAGGAACTGTGGGAGGTGG |
TREX1 |
ENSG00000213689 |
-2.1611618632771377 |
[509] |
[310] |
-8 |
hSpCas9 |
negative selection |
2370516 |
48466818 |
48466841 |
3 |
- |
24336569 |
KBM7 |
viability |
CGCGGTGGTGGAGGAACTGTGGG |
TREX1 |
ENSG00000213689 |
0.5806176952817694 |
[265] |
[1084] |
5 |
hSpCas9 |
negative selection |
2370517 |
48465371 |
48465394 |
3 |
- |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
AACCAGTCCCTTCCACACCCAGG |
TREX1 |
ENSG00000213689 |
0.27766632122663304 |
[66,77] |
[7,30] |
1 |
dCas9-VP64 |
positive selection |
2447873 |
48465422 |
48465445 |
3 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
GTGGGACCTGCCCTAGGCCCTGG |
TREX1 |
ENSG00000213689 |
-1.7940840572598216 |
[58,121] |
[3,6] |
-8 |
dCas9-VP64 |
positive selection |
2447874 |
48465398 |
48465421 |
3 |
- |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
TCTCCTCCCCCAACGTCCGCAGG |
TREX1 |
ENSG00000213689 |
0.9194633876869518 |
[581,410] |
[375,22] |
4 |
dCas9-VP64 |
positive selection |
2447875 |
48465371 |
48465394 |
3 |
- |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
AACCAGTCCCTTCCACACCCAGG |
TREX1 |
ENSG00000213689 |
-0.18837474017870814 |
[191,258] |
[77,51] |
-2 |
dCas9-VP64 |
positive selection |
2543128 |
48465422 |
48465445 |
3 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
GTGGGACCTGCCCTAGGCCCTGG |
TREX1 |
ENSG00000213689 |
-0.7651030192960651 |
[452,72] |
[26,72] |
-7 |
dCas9-VP64 |
positive selection |
2543129 |
48465398 |
48465421 |
3 |
- |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
TCTCCTCCCCCAACGTCCGCAGG |
TREX1 |
ENSG00000213689 |
-0.03300606739098022 |
[244,563] |
[66,185] |
0 |
dCas9-VP64 |
positive selection |
2543130 |
48466790 |
48466813 |
3 |
+ |
27453484 |
HT29 |
resistance to T3SS1-dependent cytotoxicity |
AGAGCCCCCCCACCTCTCAGGGG |
TREX1 |
ENSG00000213689 |
0.09201148595888042 |
[4,4] |
[3,4] |
2 |
hSpCas9 |
positive selection |
3029035 |
48466693 |
48466716 |
3 |
- |
27453484 |
HT29 |
resistance to T3SS1-dependent cytotoxicity |
CTCCATGTCGAAAAAGATGAGGG |
TREX1 |
ENSG00000213689 |
0.35616808470760175 |
[4,3] |
[3,5] |
7 |
hSpCas9 |
positive selection |
3029036 |
48466836 |
48466859 |
3 |
- |
27453484 |
HT29 |
resistance to T3SS1-dependent cytotoxicity |
GAGAGCTTGTCTACCACACGCGG |
TREX1 |
ENSG00000213689 |
-0.32203235667112545 |
[3,3] |
[2,0] |
-4 |
hSpCas9 |
positive selection |
3029037 |
48467007 |
48467030 |
3 |
- |
27453484 |
HT29 |
resistance to T3SS1-dependent cytotoxicity |
TTGTGTGCCACCAGGCACCAGGG |
TREX1 |
ENSG00000213689 |
-0.3941929684186783 |
[3,3] |
[4,0] |
-5 |
hSpCas9 |
positive selection |
3029038 |
48466790 |
48466813 |
3 |
+ |
27453484 |
HT29 |
resistance to T3SS2-dependent cytotoxicity |
AGAGCCCCCCCACCTCTCAGGGG |
TREX1 |
ENSG00000213689 |
-0.18938662853901506 |
[4,4] |
[4,1] |
-3 |
hSpCas9 |
positive selection |
3096893 |
48466693 |
48466716 |
3 |
- |
27453484 |
HT29 |
resistance to T3SS2-dependent cytotoxicity |
CTCCATGTCGAAAAAGATGAGGG |
TREX1 |
ENSG00000213689 |
-0.044693064623768125 |
[4,4] |
[3,2] |
0 |
hSpCas9 |
positive selection |
3096894 |
48466836 |
48466859 |
3 |
- |
27453484 |
HT29 |
resistance to T3SS2-dependent cytotoxicity |
GAGAGCTTGTCTACCACACGCGG |
TREX1 |
ENSG00000213689 |
-0.3247961573057258 |
[3,3] |
[3,0] |
-5 |
hSpCas9 |
positive selection |
3096895 |
48467007 |
48467030 |
3 |
- |
27453484 |
HT29 |
resistance to T3SS2-dependent cytotoxicity |
TTGTGTGCCACCAGGCACCAGGG |
TREX1 |
ENSG00000213689 |
-0.07014860529458418 |
[3,3] |
[3,1] |
-1 |
hSpCas9 |
positive selection |
3096896 |
48467196 |
48467219 |
|
+ |
24336571 |
A375 |
resistance to PLX after 7 days |
AGCATCTACACTCGCCTGTATGG |
TREX1 |
ENSG00000213689 |
-0.07029130288515062 |
[30,26] |
[26,27] |
-2 |
hSpCas9 |
positive selection |
3152494 |
48466823 |
48466846 |
|
+ |
24336571 |
A375 |
resistance to PLX after 7 days |
AGTTCCTCCACCACCGCGTGTGG |
TREX1 |
ENSG00000213689 |
0.1617665072043013 |
[29,28] |
[33,30] |
5 |
hSpCas9 |
positive selection |
3152495 |
48467229 |
48467252 |
|
- |
24336571 |
A375 |
resistance to PLX after 7 days |
CCCTCAGCCGTGTGCGAGTCTGG |
TREX1 |
ENSG00000213689 |
-0.16204048639985508 |
[13,12] |
[11,11] |
-5 |
hSpCas9 |
positive selection |
3152496 |
48467196 |
48467219 |
|
+ |
24336571 |
A375 |
resistance to PLX after 14 days |
AGCATCTACACTCGCCTGTATGG |
TREX1 |
ENSG00000213689 |
-0.7070003149802808 |
[31,23] |
[6,7] |
-8 |
hSpCas9 |
positive selection |
3210287 |
48466823 |
48466846 |
|
+ |
24336571 |
A375 |
resistance to PLX after 14 days |
AGTTCCTCCACCACCGCGTGTGG |
TREX1 |
ENSG00000213689 |
-0.4747468972382015 |
[34,28] |
[9,10] |
-5 |
hSpCas9 |
positive selection |
3210288 |
48467229 |
48467252 |
|
- |
24336571 |
A375 |
resistance to PLX after 14 days |
CCCTCAGCCGTGTGCGAGTCTGG |
TREX1 |
ENSG00000213689 |
-0.32151886597668294 |
[13,10] |
[4,3] |
-4 |
hSpCas9 |
positive selection |
3210289 |
48467196 |
48467219 |
|
+ |
24336571 |
A375 |
viability after 7 days |
AGCATCTACACTCGCCTGTATGG |
TREX1 |
ENSG00000213689 |
0.49011191082583283 |
[21] |
[30,26] |
7 |
hSpCas9 |
negative selection |
3268080 |
48466823 |
48466846 |
|
+ |
24336571 |
A375 |
viability after 7 days |
AGTTCCTCCACCACCGCGTGTGG |
TREX1 |
ENSG00000213689 |
0.01752974724687717 |
[30] |
[29,28] |
0 |
hSpCas9 |
negative selection |
3268081 |
48467229 |
48467252 |
|
- |
24336571 |
A375 |
viability after 7 days |
CCCTCAGCCGTGTGCGAGTCTGG |
TREX1 |
ENSG00000213689 |
0.3725003955881123 |
[10] |
[13,12] |
5 |
hSpCas9 |
negative selection |
3268082 |
48467196 |
48467219 |
|
+ |
24336571 |
A375 |
viability after 14 days |
AGCATCTACACTCGCCTGTATGG |
TREX1 |
ENSG00000213689 |
0.42379066705772106 |
[21] |
[31,23] |
5 |
hSpCas9 |
negative selection |
3325873 |
48466823 |
48466846 |
|
+ |
24336571 |
A375 |
viability after 14 days |
AGTTCCTCCACCACCGCGTGTGG |
TREX1 |
ENSG00000213689 |
0.14758322327457263 |
[30] |
[34,28] |
2 |
hSpCas9 |
negative selection |
3325874 |
48467229 |
48467252 |
|
- |
24336571 |
A375 |
viability after 14 days |
CCCTCAGCCGTGTGCGAGTCTGG |
TREX1 |
ENSG00000213689 |
0.2704205330503662 |
[10] |
[13,10] |
3 |
hSpCas9 |
negative selection |
3325875 |
48467114 |
48467137 |
3 |
+ |
27383988 |
293T |
resistance to West Nile virus (flavivirus) |
GGATAGCATCACTGCGCTGAAGG |
TREX1 |
ENSG00000213689 |
0.6279695913662254 |
[98,98] |
[0,0] |
3 |
hSpCas9 |
positive selection |
3398909 |
48467222 |
48467245 |
3 |
+ |
27383988 |
293T |
resistance to West Nile virus (flavivirus) |
GTCCCCTCCAGACTCGCACACGG |
TREX1 |
ENSG00000213689 |
0.25732621144583506 |
[127,127] |
[0,0] |
1 |
hSpCas9 |
positive selection |
3398910 |
48466836 |
48466859 |
3 |
- |
27383988 |
293T |
resistance to West Nile virus (flavivirus) |
GAGAGCTTGTCTACCACACGCGG |
TREX1 |
ENSG00000213689 |
-0.5628527509693527 |
[225,225] |
[0,0] |
-4 |
hSpCas9 |
positive selection |
3398911 |
48466789 |
48466812 |
3 |
+ |
26780180 |
HT29 |
viability (Avana library 4 designs) |
AGAGCCCCCCCACCTCTCAGGGG |
TREX1 |
ENSG00000213689 |
0.245134425750517 |
[] |
[] |
0 |
hSpCas9 |
negative selection |
3467883 |
48466693 |
48466716 |
3 |
- |
26780180 |
HT29 |
viability (Avana library 4 designs) |
CTCCATGTCGAAAAAGATGAGGG |
TREX1 |
ENSG00000213689 |
1.52743226049138 |
[] |
[] |
6 |
hSpCas9 |
negative selection |
3467884 |
48466836 |
48466859 |
3 |
- |
26780180 |
HT29 |
viability (Avana library 4 designs) |
GAGAGCTTGTCTACCACACGCGG |
TREX1 |
ENSG00000213689 |
1.19690036141252 |
[] |
[] |
4 |
hSpCas9 |
negative selection |
3467885 |
48467007 |
48467030 |
3 |
- |
26780180 |
HT29 |
viability (Avana library 4 designs) |
TTGTGTGCCACCAGGCACCAGGG |
TREX1 |
ENSG00000213689 |
0.760784280196099 |
[] |
[] |
3 |
hSpCas9 |
negative selection |
3467886 |
48466836 |
48466859 |
3 |
- |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
GAGAGCTTGTCTACCACACGCGG |
TREX1 |
ENSG00000213689 |
2.46714052163052 |
[] |
[] |
3 |
hSpCas9 |
negative selection |
3572270 |
48467007 |
48467030 |
3 |
- |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
TTGTGTGCCACCAGGCACCAGGG |
TREX1 |
ENSG00000213689 |
2.37313152951713 |
[] |
[] |
3 |
hSpCas9 |
negative selection |
3572271 |
48466693 |
48466716 |
3 |
- |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
CTCCATGTCGAAAAAGATGAGGG |
TREX1 |
ENSG00000213689 |
2.18865484197178 |
[] |
[] |
3 |
hSpCas9 |
negative selection |
3572272 |
48466789 |
48466812 |
3 |
+ |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
AGAGCCCCCCCACCTCTCAGGGG |
TREX1 |
ENSG00000213689 |
4.92638744599582 |
[] |
[] |
8 |
hSpCas9 |
negative selection |
3572273 |
48466855 |
48466878 |
3 |
+ |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
TCTCCCTGTGTGTGGCTCCGGGG |
TREX1 |
ENSG00000213689 |
-1.60677879143552 |
[] |
[] |
-2 |
hSpCas9 |
negative selection |
3572274 |
48466897 |
48466920 |
3 |
- |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
GCTCAGACCTGTGATCTCGCTGG |
TREX1 |
ENSG00000213689 |
2.13788311463542 |
[] |
[] |
3 |
hSpCas9 |
negative selection |
3572275 |
48466836 |
48466859 |
3 |
- |
26780180 |
A375 |
viability (Avana lentiGuide) |
GAGAGCTTGTCTACCACACGCGG |
TREX1 |
ENSG00000213689 |
3.70686070505028 |
[] |
[] |
3 |
hSpCas9 |
negative selection |
3680929 |
48467007 |
48467030 |
3 |
- |
26780180 |
A375 |
viability (Avana lentiGuide) |
TTGTGTGCCACCAGGCACCAGGG |
TREX1 |
ENSG00000213689 |
-3.49224673660112 |
[] |
[] |
-6 |
hSpCas9 |
negative selection |
3680930 |
48466693 |
48466716 |
3 |
- |
26780180 |
A375 |
viability (Avana lentiGuide) |
CTCCATGTCGAAAAAGATGAGGG |
TREX1 |
ENSG00000213689 |
-0.593033151132932 |
[] |
[] |
-1 |
hSpCas9 |
negative selection |
3680931 |
48466789 |
48466812 |
3 |
+ |
26780180 |
A375 |
viability (Avana lentiGuide) |
AGAGCCCCCCCACCTCTCAGGGG |
TREX1 |
ENSG00000213689 |
0.146302751415866 |
[] |
[] |
0 |
hSpCas9 |
negative selection |
3680932 |
48466855 |
48466878 |
3 |
+ |
26780180 |
A375 |
viability (Avana lentiGuide) |
TCTCCCTGTGTGTGGCTCCGGGG |
TREX1 |
ENSG00000213689 |
11.5627185219032 |
[] |
[] |
7 |
hSpCas9 |
negative selection |
3680933 |
48466897 |
48466920 |
3 |
- |
26780180 |
A375 |
viability (Avana lentiGuide) |
GCTCAGACCTGTGATCTCGCTGG |
TREX1 |
ENSG00000213689 |
2.22532841298941 |
[] |
[] |
2 |
hSpCas9 |
negative selection |
3680934 |
48466836 |
48466859 |
3 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
GAGAGCTTGTCTACCACACGCGG |
TREX1 |
ENSG00000213689 |
0.17160323346457268 |
[4] |
[5,4] |
5 |
hSpCas9 |
positive selection |
3789536 |
48467007 |
48467030 |
3 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
TTGTGTGCCACCAGGCACCAGGG |
TREX1 |
ENSG00000213689 |
0.15302281948183422 |
[5] |
[5,5] |
4 |
hSpCas9 |
positive selection |
3789537 |
48466693 |
48466716 |
3 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
CTCCATGTCGAAAAAGATGAGGG |
TREX1 |
ENSG00000213689 |
-0.24085329206525452 |
[5] |
[3,4] |
-4 |
hSpCas9 |
positive selection |
3789538 |
48466789 |
48466812 |
3 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
AGAGCCCCCCCACCTCTCAGGGG |
TREX1 |
ENSG00000213689 |
0.2893330652688386 |
[5] |
[7,6] |
8 |
hSpCas9 |
positive selection |
3789539 |
48466855 |
48466878 |
3 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
TCTCCCTGTGTGTGGCTCCGGGG |
TREX1 |
ENSG00000213689 |
-0.45732265054904264 |
[1] |
[0,0] |
-6 |
hSpCas9 |
positive selection |
3789540 |
48466897 |
48466920 |
3 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
GCTCAGACCTGTGATCTCGCTGG |
TREX1 |
ENSG00000213689 |
-0.5029321703278233 |
[4] |
[1,3] |
-6 |
hSpCas9 |
positive selection |
3789541 |
48466836 |
48466859 |
3 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
GAGAGCTTGTCTACCACACGCGG |
TREX1 |
ENSG00000213689 |
-0.4128772473264611 |
[4] |
[3,1] |
-5 |
hSpCas9 |
positive selection |
3898143 |
48467007 |
48467030 |
3 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
TTGTGTGCCACCAGGCACCAGGG |
TREX1 |
ENSG00000213689 |
-0.4158826168389143 |
[5] |
[2,3] |
-5 |
hSpCas9 |
positive selection |
3898144 |
48466693 |
48466716 |
3 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
CTCCATGTCGAAAAAGATGAGGG |
TREX1 |
ENSG00000213689 |
0.2611924247534218 |
[5] |
[6,5] |
7 |
hSpCas9 |
positive selection |
3898145 |
48466789 |
48466812 |
3 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
AGAGCCCCCCCACCTCTCAGGGG |
TREX1 |
ENSG00000213689 |
0.3678397352281338 |
[6] |
[6,7] |
9 |
hSpCas9 |
positive selection |
3898146 |
48466855 |
48466878 |
3 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
TCTCCCTGTGTGTGGCTCCGGGG |
TREX1 |
ENSG00000213689 |
-1.2371079375703928 |
[1] |
[0,0] |
-9 |
hSpCas9 |
positive selection |
3898147 |
48466897 |
48466920 |
3 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
GCTCAGACCTGTGATCTCGCTGG |
TREX1 |
ENSG00000213689 |
0.1869930116434811 |
[5] |
[5,4] |
4 |
hSpCas9 |
positive selection |
3898148 |
48467196 |
48467219 |
3 |
+ |
26780180 |
A375 |
viability |
AGCATCTACACTCGCCTGTATGG |
TREX1 |
ENSG00000213689 |
0.826842636351706 |
[] |
[] |
3 |
hSpCas9 |
negative selection |
4007480 |
48466823 |
48466846 |
3 |
+ |
26780180 |
A375 |
viability |
AGTTCCTCCACCACCGCGTGTGG |
TREX1 |
ENSG00000213689 |
1.20264027382062 |
[] |
[] |
6 |
hSpCas9 |
negative selection |
4007481 |
48467229 |
48467252 |
3 |
- |
26780180 |
A375 |
viability |
CCCTCAGCCGTGTGCGAGTCTGG |
TREX1 |
ENSG00000213689 |
1.39367031502627 |
[] |
[] |
7 |
hSpCas9 |
negative selection |
4007482 |
48466836 |
48466859 |
3 |
- |
26780180 |
A375 |
viability |
GAGAGCTTGTCTACCACACGCGG |
TREX1 |
ENSG00000213689 |
1.44788133435732 |
[] |
[] |
8 |
hSpCas9 |
negative selection |
4007483 |
48467114 |
48467137 |
3 |
+ |
26780180 |
A375 |
viability |
GGATAGCATCACTGCGCTGAAGG |
TREX1 |
ENSG00000213689 |
1.60323523412028 |
[] |
[] |
8 |
hSpCas9 |
negative selection |
4007484 |
48467222 |
48467245 |
3 |
+ |
26780180 |
A375 |
viability |
GTCCCCTCCAGACTCGCACACGG |
TREX1 |
ENSG00000213689 |
0.460108421598955 |
[] |
[] |
1 |
hSpCas9 |
negative selection |
4007485 |
48467196 |
48467219 |
3 |
+ |
26780180 |
HT29 |
viability (GeCKOv2 library) |
AGCATCTACACTCGCCTGTATGG |
TREX1 |
ENSG00000213689 |
1.04774061288352 |
[] |
[] |
5 |
hSpCas9 |
negative selection |
4115446 |
48466823 |
48466846 |
3 |
+ |
26780180 |
HT29 |
viability (GeCKOv2 library) |
AGTTCCTCCACCACCGCGTGTGG |
TREX1 |
ENSG00000213689 |
1.01429607537974 |
[] |
[] |
4 |
hSpCas9 |
negative selection |
4115447 |
48467229 |
48467252 |
3 |
- |
26780180 |
HT29 |
viability (GeCKOv2 library) |
CCCTCAGCCGTGTGCGAGTCTGG |
TREX1 |
ENSG00000213689 |
0.760623679856178 |
[] |
[] |
3 |
hSpCas9 |
negative selection |
4115448 |
48466836 |
48466859 |
3 |
- |
26780180 |
HT29 |
viability (GeCKOv2 library) |
GAGAGCTTGTCTACCACACGCGG |
TREX1 |
ENSG00000213689 |
0.914047766922219 |
[] |
[] |
4 |
hSpCas9 |
negative selection |
4115449 |
48467114 |
48467137 |
3 |
+ |
26780180 |
HT29 |
viability (GeCKOv2 library) |
GGATAGCATCACTGCGCTGAAGG |
TREX1 |
ENSG00000213689 |
1.89065851739388 |
[] |
[] |
9 |
hSpCas9 |
negative selection |
4115450 |
48467222 |
48467245 |
3 |
+ |
26780180 |
HT29 |
viability (GeCKOv2 library) |
GTCCCCTCCAGACTCGCACACGG |
TREX1 |
ENSG00000213689 |
0.63227085547278 |
[] |
[] |
2 |
hSpCas9 |
negative selection |
4115451 |
48467196 |
48467219 |
3 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiCRISPRv1) |
AGCATCTACACTCGCCTGTATGG |
TREX1 |
ENSG00000213689 |
-0.0251445300614348 |
[5] |
[3,2] |
0 |
hSpCas9 |
positive selection |
4179049 |
48466823 |
48466846 |
3 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiCRISPRv1) |
AGTTCCTCCACCACCGCGTGTGG |
TREX1 |
ENSG00000213689 |
0.010527130042402633 |
[4] |
[3,3] |
0 |
hSpCas9 |
positive selection |
4179050 |
48467229 |
48467252 |
3 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiCRISPRv1) |
CCCTCAGCCGTGTGCGAGTCTGG |
TREX1 |
ENSG00000213689 |
0.05506602783496405 |
[3] |
[2,1] |
1 |
hSpCas9 |
positive selection |
4179051 |
48467196 |
48467219 |
3 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiGuide) |
AGCATCTACACTCGCCTGTATGG |
TREX1 |
ENSG00000213689 |
0.003465368309257588 |
[4] |
[1,3,3,0] |
0 |
hSpCas9 |
positive selection |
4243071 |
48466823 |
48466846 |
3 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiGuide) |
AGTTCCTCCACCACCGCGTGTGG |
TREX1 |
ENSG00000213689 |
1.3026118216629026 |
[4] |
[5,4,5,5] |
9 |
hSpCas9 |
positive selection |
4243072 |
48467229 |
48467252 |
3 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiGuide) |
CCCTCAGCCGTGTGCGAGTCTGG |
TREX1 |
ENSG00000213689 |
0.5011128261214259 |
[2] |
[3,3,0,0] |
3 |
hSpCas9 |
positive selection |
4243073 |
48467196 |
48467219 |
3 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
AGCATCTACACTCGCCTGTATGG |
TREX1 |
ENSG00000213689 |
0.6935904059029662 |
[2] |
[4,4] |
9 |
hSpCas9 |
positive selection |
4304993 |
48466823 |
48466846 |
3 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
AGTTCCTCCACCACCGCGTGTGG |
TREX1 |
ENSG00000213689 |
0.19578678675850236 |
[4] |
[4,3] |
4 |
hSpCas9 |
positive selection |
4304994 |
48467229 |
48467252 |
3 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
CCCTCAGCCGTGTGCGAGTCTGG |
TREX1 |
ENSG00000213689 |
0.1905359798162554 |
[3] |
[3,2] |
4 |
hSpCas9 |
positive selection |
4304995 |
48467114 |
48467137 |
3 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
GGATAGCATCACTGCGCTGAAGG |
TREX1 |
ENSG00000213689 |
-0.799553157328649 |
[2] |
[1,0] |
-9 |
hSpCas9 |
positive selection |
4369241 |
48467222 |
48467245 |
3 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
GTCCCCTCCAGACTCGCACACGG |
TREX1 |
ENSG00000213689 |
-0.25043245370157086 |
[2] |
[2,0] |
-5 |
hSpCas9 |
positive selection |
4369242 |
48466836 |
48466859 |
3 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
GAGAGCTTGTCTACCACACGCGG |
TREX1 |
ENSG00000213689 |
-0.40088680045320196 |
[3] |
[2,1] |
-7 |
hSpCas9 |
positive selection |
4369243 |
48466830 |
48466852 |
3 |
- |
27760321 |
OCIAML3 |
viability |
TGTCTACCACACGCGGTGGTGG |
TREX1 |
ENSG00000213689 |
0.2199899341677466 |
[782,812] |
[775,670] |
2 |
hSpCas9 |
negative selection |
4449857 |
48466922 |
48466944 |
3 |
+ |
27760321 |
OCIAML3 |
viability |
AGCTGTGCTGGCAGCGCATGGG |
TREX1 |
ENSG00000213689 |
-0.5923179708936298 |
[457,412] |
[114,369] |
-5 |
hSpCas9 |
negative selection |
4449858 |
48467015 |
48467037 |
3 |
- |
27760321 |
OCIAML3 |
viability |
GTCACCATTGTGTGCCACCAGG |
TREX1 |
ENSG00000213689 |
-0.06998504423156682 |
[1057,874] |
[491,1009] |
-1 |
hSpCas9 |
negative selection |
4449859 |
48467036 |
48467058 |
3 |
- |
27760321 |
OCIAML3 |
viability |
GAGCAGGGGGAAGTCGTAGCGG |
TREX1 |
ENSG00000213689 |
0.7389114665904104 |
[315,236] |
[290,444] |
8 |
hSpCas9 |
negative selection |
4449860 |
48467230 |
48467252 |
3 |
+ |
27760321 |
OCIAML3 |
viability |
CAGACTCGCACACGGCTGAGGG |
TREX1 |
ENSG00000213689 |
0.21765722447634284 |
[697,632] |
[530,700] |
2 |
hSpCas9 |
negative selection |
4449861 |
48466830 |
48466852 |
3 |
- |
27760321 |
OCIAML2 |
viability |
TGTCTACCACACGCGGTGGTGG |
TREX1 |
ENSG00000213689 |
-0.08027642524120904 |
[782,812] |
[531,720] |
-1 |
hSpCas9 |
negative selection |
4533320 |
48466922 |
48466944 |
3 |
+ |
27760321 |
OCIAML2 |
viability |
AGCTGTGCTGGCAGCGCATGGG |
TREX1 |
ENSG00000213689 |
-0.32763877402332614 |
[457,412] |
[254,313] |
-4 |
hSpCas9 |
negative selection |
4533321 |
48467015 |
48467037 |
3 |
- |
27760321 |
OCIAML2 |
viability |
GTCACCATTGTGTGCCACCAGG |
TREX1 |
ENSG00000213689 |
0.08009465995021037 |
[1057,874] |
[707,973] |
1 |
hSpCas9 |
negative selection |
4533322 |
48467036 |
48467058 |
3 |
- |
27760321 |
OCIAML2 |
viability |
GAGCAGGGGGAAGTCGTAGCGG |
TREX1 |
ENSG00000213689 |
0.03218020784870024 |
[315,236] |
[152,323] |
0 |
hSpCas9 |
negative selection |
4533323 |
48467230 |
48467252 |
3 |
+ |
27760321 |
OCIAML2 |
viability |
CAGACTCGCACACGGCTGAGGG |
TREX1 |
ENSG00000213689 |
-0.1372752104696484 |
[697,632] |
[467,516] |
-2 |
hSpCas9 |
negative selection |
4533324 |
48466830 |
48466852 |
3 |
- |
27760321 |
MV411 |
viability |
TGTCTACCACACGCGGTGGTGG |
TREX1 |
ENSG00000213689 |
-1.1147282811150725 |
[782,812] |
[179,340] |
-6 |
hSpCas9 |
negative selection |
4616783 |
48466922 |
48466944 |
3 |
+ |
27760321 |
MV411 |
viability |
AGCTGTGCTGGCAGCGCATGGG |
TREX1 |
ENSG00000213689 |
0.18416153252907422 |
[457,412] |
[330,318] |
1 |
hSpCas9 |
negative selection |
4616784 |
48467015 |
48467037 |
3 |
- |
27760321 |
MV411 |
viability |
GTCACCATTGTGTGCCACCAGG |
TREX1 |
ENSG00000213689 |
0.3096696028068562 |
[1057,874] |
[967,514] |
2 |
hSpCas9 |
negative selection |
4616785 |
48467036 |
48467058 |
3 |
- |
27760321 |
MV411 |
viability |
GAGCAGGGGGAAGTCGTAGCGG |
TREX1 |
ENSG00000213689 |
1.808966671095662 |
[315,236] |
[796,388] |
9 |
hSpCas9 |
negative selection |
4616786 |
48467230 |
48467252 |
3 |
+ |
27760321 |
MV411 |
viability |
CAGACTCGCACACGGCTGAGGG |
TREX1 |
ENSG00000213689 |
0.6828566955108599 |
[697,632] |
[807,548] |
5 |
hSpCas9 |
negative selection |
4616787 |
48466830 |
48466852 |
3 |
- |
27760321 |
HL60 |
viability |
TGTCTACCACACGCGGTGGTGG |
TREX1 |
ENSG00000213689 |
-0.1955545410478906 |
[782,812] |
[587,554] |
-2 |
hSpCas9 |
negative selection |
4700246 |
48466922 |
48466944 |
3 |
+ |
27760321 |
HL60 |
viability |
AGCTGTGCTGGCAGCGCATGGG |
TREX1 |
ENSG00000213689 |
-0.23531428687271963 |
[457,412] |
[232,374] |
-3 |
hSpCas9 |
negative selection |
4700247 |
48467015 |
48467037 |
3 |
- |
27760321 |
HL60 |
viability |
GTCACCATTGTGTGCCACCAGG |
TREX1 |
ENSG00000213689 |
0.5990658237837387 |
[1057,874] |
[1141,1241] |
7 |
hSpCas9 |
negative selection |
4700248 |
48467036 |
48467058 |
3 |
- |
27760321 |
HL60 |
viability |
GAGCAGGGGGAAGTCGTAGCGG |
TREX1 |
ENSG00000213689 |
0.4701774688490785 |
[315,236] |
[334,283] |
6 |
hSpCas9 |
negative selection |
4700249 |
48467230 |
48467252 |
3 |
+ |
27760321 |
HL60 |
viability |
CAGACTCGCACACGGCTGAGGG |
TREX1 |
ENSG00000213689 |
0.45003011449652774 |
[697,632] |
[761,720] |
5 |
hSpCas9 |
negative selection |
4700250 |
48466830 |
48466852 |
3 |
- |
27760321 |
HT1080 |
viability |
TGTCTACCACACGCGGTGGTGG |
TREX1 |
ENSG00000213689 |
0.44014882716023895 |
[812,634] |
[176,625] |
2 |
hSpCas9 |
negative selection |
4783709 |
48466922 |
48466944 |
3 |
+ |
27760321 |
HT1080 |
viability |
AGCTGTGCTGGCAGCGCATGGG |
TREX1 |
ENSG00000213689 |
-0.8716377617863849 |
[412,321] |
[37,125] |
-4 |
hSpCas9 |
negative selection |
4783710 |
48467015 |
48467037 |
3 |
- |
27760321 |
HT1080 |
viability |
GTCACCATTGTGTGCCACCAGG |
TREX1 |
ENSG00000213689 |
0.4997036667922996 |
[874,682] |
[349,535] |
2 |
hSpCas9 |
negative selection |
4783711 |
48467036 |
48467058 |
3 |
- |
27760321 |
HT1080 |
viability |
GAGCAGGGGGAAGTCGTAGCGG |
TREX1 |
ENSG00000213689 |
0.22540855414927086 |
[236,184] |
[103,91] |
1 |
hSpCas9 |
negative selection |
4783712 |
48467230 |
48467252 |
3 |
+ |
27760321 |
HT1080 |
viability |
CAGACTCGCACACGGCTGAGGG |
TREX1 |
ENSG00000213689 |
1.2438034329914456 |
[632,493] |
[491,574] |
6 |
hSpCas9 |
negative selection |
4783713 |
48466830 |
48466852 |
3 |
- |
27760321 |
HT29 |
viability after 7 days |
TGTCTACCACACGCGGTGGTGG |
TREX1 |
ENSG00000213689 |
-0.3525307511699075 |
[812,634] |
[934,596,684] |
-5 |
hSpCas9 |
negative selection |
4867172 |
48466922 |
48466944 |
3 |
+ |
27760321 |
HT29 |
viability after 7 days |
AGCTGTGCTGGCAGCGCATGGG |
TREX1 |
ENSG00000213689 |
0.187289299350421 |
[412,321] |
[381,515,687] |
3 |
hSpCas9 |
negative selection |
4867173 |
48467015 |
48467037 |
3 |
- |
27760321 |
HT29 |
viability after 7 days |
GTCACCATTGTGTGCCACCAGG |
TREX1 |
ENSG00000213689 |
0.06950085763121394 |
[874,682] |
[1039,1060,1048] |
1 |
hSpCas9 |
negative selection |
4867174 |
48467036 |
48467058 |
3 |
- |
27760321 |
HT29 |
viability after 7 days |
GAGCAGGGGGAAGTCGTAGCGG |
TREX1 |
ENSG00000213689 |
0.23419457151943146 |
[236,184] |
[373,281,308] |
3 |
hSpCas9 |
negative selection |
4867175 |
48467230 |
48467252 |
3 |
+ |
27760321 |
HT29 |
viability after 7 days |
CAGACTCGCACACGGCTGAGGG |
TREX1 |
ENSG00000213689 |
0.04882657716469141 |
[632,493] |
[970,627,681] |
0 |
hSpCas9 |
negative selection |
4867176 |
48466830 |
48466852 |
3 |
- |
27760321 |
HT29 |
viability after 25 days |
TGTCTACCACACGCGGTGGTGG |
TREX1 |
ENSG00000213689 |
0.23279144859449774 |
[812,634] |
[918,1017,982] |
2 |
hSpCas9 |
negative selection |
4950635 |
48466922 |
48466944 |
3 |
+ |
27760321 |
HT29 |
viability after 25 days |
AGCTGTGCTGGCAGCGCATGGG |
TREX1 |
ENSG00000213689 |
-0.2846421546634458 |
[412,321] |
[456,230,337] |
-3 |
hSpCas9 |
negative selection |
4950636 |
48467015 |
48467037 |
3 |
- |
27760321 |
HT29 |
viability after 25 days |
GTCACCATTGTGTGCCACCAGG |
TREX1 |
ENSG00000213689 |
0.6799065397556938 |
[874,682] |
[1364,1285,1652] |
7 |
hSpCas9 |
negative selection |
4950637 |
48467036 |
48467058 |
3 |
- |
27760321 |
HT29 |
viability after 25 days |
GAGCAGGGGGAAGTCGTAGCGG |
TREX1 |
ENSG00000213689 |
0.128337085969511 |
[236,184] |
[319,226,236] |
1 |
hSpCas9 |
negative selection |
4950638 |
48467230 |
48467252 |
3 |
+ |
27760321 |
HT29 |
viability after 25 days |
CAGACTCGCACACGGCTGAGGG |
TREX1 |
ENSG00000213689 |
0.3633151504592885 |
[632,493] |
[767,983,724] |
4 |
hSpCas9 |
negative selection |
4950639 |
48466830 |
48466852 |
3 |
- |
27760321 |
HT29 |
viability after 22 days |
TGTCTACCACACGCGGTGGTGG |
TREX1 |
ENSG00000213689 |
0.07386262600042959 |
[812,634] |
[795,782,1067] |
0 |
hSpCas9 |
negative selection |
5034098 |
48466922 |
48466944 |
3 |
+ |
27760321 |
HT29 |
viability after 22 days |
AGCTGTGCTGGCAGCGCATGGG |
TREX1 |
ENSG00000213689 |
-0.10600843222576277 |
[412,321] |
[433,259,489] |
-1 |
hSpCas9 |
negative selection |
5034099 |
48467015 |
48467037 |
3 |
- |
27760321 |
HT29 |
viability after 22 days |
GTCACCATTGTGTGCCACCAGG |
TREX1 |
ENSG00000213689 |
0.42746025989478653 |
[874,682] |
[868,1314,1460] |
4 |
hSpCas9 |
negative selection |
5034100 |
48467036 |
48467058 |
3 |
- |
27760321 |
HT29 |
viability after 22 days |
GAGCAGGGGGAAGTCGTAGCGG |
TREX1 |
ENSG00000213689 |
0.5208468648967054 |
[236,184] |
[313,378,357] |
6 |
hSpCas9 |
negative selection |
5034101 |
48467230 |
48467252 |
3 |
+ |
27760321 |
HT29 |
viability after 22 days |
CAGACTCGCACACGGCTGAGGG |
TREX1 |
ENSG00000213689 |
0.12897184238623982 |
[632,493] |
[653,729,754] |
1 |
hSpCas9 |
negative selection |
5034102 |
48466830 |
48466852 |
3 |
- |
27760321 |
HT29 |
viability after 19 days |
TGTCTACCACACGCGGTGGTGG |
TREX1 |
ENSG00000213689 |
-0.37294517846971764 |
[812,634] |
[975,361,615] |
-3 |
hSpCas9 |
negative selection |
5117561 |
48466922 |
48466944 |
3 |
+ |
27760321 |
HT29 |
viability after 19 days |
AGCTGTGCTGGCAGCGCATGGG |
TREX1 |
ENSG00000213689 |
0.07828452712563172 |
[412,321] |
[717,370,276] |
0 |
hSpCas9 |
negative selection |
5117562 |
48467015 |
48467037 |
3 |
- |
27760321 |
HT29 |
viability after 19 days |
GTCACCATTGTGTGCCACCAGG |
TREX1 |
ENSG00000213689 |
0.7790083314430585 |
[874,682] |
[1093,1733,1704] |
7 |
hSpCas9 |
negative selection |
5117563 |
48467036 |
48467058 |
3 |
- |
27760321 |
HT29 |
viability after 19 days |
GAGCAGGGGGAAGTCGTAGCGG |
TREX1 |
ENSG00000213689 |
0.011821321819387554 |
[236,184] |
[233,203,288] |
0 |
hSpCas9 |
negative selection |
5117564 |
48467230 |
48467252 |
3 |
+ |
27760321 |
HT29 |
viability after 19 days |
CAGACTCGCACACGGCTGAGGG |
TREX1 |
ENSG00000213689 |
0.32475342662251616 |
[632,493] |
[687,981,740] |
3 |
hSpCas9 |
negative selection |
5117565 |
48466830 |
48466852 |
3 |
- |
27760321 |
HT29 |
viability after 16 days |
TGTCTACCACACGCGGTGGTGG |
TREX1 |
ENSG00000213689 |
-0.2445461688082582 |
[812,634] |
[624,782,634] |
-3 |
hSpCas9 |
negative selection |
5201024 |
48466922 |
48466944 |
3 |
+ |
27760321 |
HT29 |
viability after 16 days |
AGCTGTGCTGGCAGCGCATGGG |
TREX1 |
ENSG00000213689 |
-0.12006868974978936 |
[412,321] |
[416,320,401] |
-1 |
hSpCas9 |
negative selection |
5201025 |
48467015 |
48467037 |
3 |
- |
27760321 |
HT29 |
viability after 16 days |
GTCACCATTGTGTGCCACCAGG |
TREX1 |
ENSG00000213689 |
0.6063378077556045 |
[874,682] |
[1214,1585,1161] |
7 |
hSpCas9 |
negative selection |
5201026 |
48467036 |
48467058 |
3 |
- |
27760321 |
HT29 |
viability after 16 days |
GAGCAGGGGGAAGTCGTAGCGG |
TREX1 |
ENSG00000213689 |
1.0943817996920617 |
[236,184] |
[194,959,315] |
9 |
hSpCas9 |
negative selection |
5201027 |
48467230 |
48467252 |
3 |
+ |
27760321 |
HT29 |
viability after 16 days |
CAGACTCGCACACGGCTGAGGG |
TREX1 |
ENSG00000213689 |
0.7046505191808038 |
[632,493] |
[1093,1008,985] |
8 |
hSpCas9 |
negative selection |
5201028 |
48466830 |
48466852 |
3 |
- |
27760321 |
HT29 |
viability after 13 days |
TGTCTACCACACGCGGTGGTGG |
TREX1 |
ENSG00000213689 |
-0.04264714052792151 |
[812,634] |
[819,958,675] |
0 |
hSpCas9 |
negative selection |
5284487 |
48466922 |
48466944 |
3 |
+ |
27760321 |
HT29 |
viability after 13 days |
AGCTGTGCTGGCAGCGCATGGG |
TREX1 |
ENSG00000213689 |
-0.3105134148640969 |
[412,321] |
[397,321,312] |
-4 |
hSpCas9 |
negative selection |
5284488 |
48467015 |
48467037 |
3 |
- |
27760321 |
HT29 |
viability after 13 days |
GTCACCATTGTGTGCCACCAGG |
TREX1 |
ENSG00000213689 |
0.21087005449580176 |
[874,682] |
[981,1316,850] |
2 |
hSpCas9 |
negative selection |
5284489 |
48467036 |
48467058 |
3 |
- |
27760321 |
HT29 |
viability after 13 days |
GAGCAGGGGGAAGTCGTAGCGG |
TREX1 |
ENSG00000213689 |
0.1448378747588842 |
[236,184] |
[278,264,267] |
1 |
hSpCas9 |
negative selection |
5284490 |
48467230 |
48467252 |
3 |
+ |
27760321 |
HT29 |
viability after 13 days |
CAGACTCGCACACGGCTGAGGG |
TREX1 |
ENSG00000213689 |
0.18678057357298095 |
[632,493] |
[683,646,891] |
2 |
hSpCas9 |
negative selection |
5284491 |
48466830 |
48466852 |
3 |
- |
27760321 |
HT29 |
viability after 10 days |
TGTCTACCACACGCGGTGGTGG |
TREX1 |
ENSG00000213689 |
-0.13388568780352827 |
[812,634] |
[888,904,682] |
-2 |
hSpCas9 |
negative selection |
5367950 |
48466922 |
48466944 |
3 |
+ |
27760321 |
HT29 |
viability after 10 days |
AGCTGTGCTGGCAGCGCATGGG |
TREX1 |
ENSG00000213689 |
-0.12015426499918712 |
[412,321] |
[476,409,379] |
-1 |
hSpCas9 |
negative selection |
5367951 |
48467015 |
48467037 |
3 |
- |
27760321 |
HT29 |
viability after 10 days |
GTCACCATTGTGTGCCACCAGG |
TREX1 |
ENSG00000213689 |
0.12980087975152999 |
[874,682] |
[1175,1125,895] |
1 |
hSpCas9 |
negative selection |
5367952 |
48467036 |
48467058 |
3 |
- |
27760321 |
HT29 |
viability after 10 days |
GAGCAGGGGGAAGTCGTAGCGG |
TREX1 |
ENSG00000213689 |
0.9168246242323731 |
[236,184] |
[538,597,360] |
9 |
hSpCas9 |
negative selection |
5367953 |
48467230 |
48467252 |
3 |
+ |
27760321 |
HT29 |
viability after 10 days |
CAGACTCGCACACGGCTGAGGG |
TREX1 |
ENSG00000213689 |
-0.014907562416653475 |
[632,493] |
[526,834,729] |
0 |
hSpCas9 |
negative selection |
5367954 |
48466830 |
48466852 |
3 |
- |
27760321 |
MOLM13 |
viability |
TGTCTACCACACGCGGTGGTGG |
TREX1 |
ENSG00000213689 |
0.4208948143582315 |
[782,812] |
[959,303] |
3 |
hSpCas9 |
negative selection |
5451413 |
48466922 |
48466944 |
3 |
+ |
27760321 |
MOLM13 |
viability |
AGCTGTGCTGGCAGCGCATGGG |
TREX1 |
ENSG00000213689 |
-0.6542142989624282 |
[457,412] |
[162,149] |
-4 |
hSpCas9 |
negative selection |
5451414 |
48467015 |
48467037 |
3 |
- |
27760321 |
MOLM13 |
viability |
GTCACCATTGTGTGCCACCAGG |
TREX1 |
ENSG00000213689 |
0.3629839683548399 |
[1057,874] |
[1213,258] |
2 |
hSpCas9 |
negative selection |
5451415 |
48467036 |
48467058 |
3 |
- |
27760321 |
MOLM13 |
viability |
GAGCAGGGGGAAGTCGTAGCGG |
TREX1 |
ENSG00000213689 |
-1.414438345106396 |
[315,236] |
[23,86] |
-7 |
hSpCas9 |
negative selection |
5451416 |
48467230 |
48467252 |
3 |
+ |
27760321 |
MOLM13 |
viability |
CAGACTCGCACACGGCTGAGGG |
TREX1 |
ENSG00000213689 |
0.8072744689033717 |
[697,632] |
[917,433] |
5 |
hSpCas9 |
negative selection |
5451417 |
48466310 |
48466333 |
3 |
+ |
27661255 |
K562 |
viability |
GTGAGTGTGGCCCCCACAATGGG |
TREX1 |
ENSG00000213689 |
0.2159531222675585 |
[626,661] |
[632,566] |
7 |
dCas9-KRAB |
negative selection |
5519577 |
48466638 |
48466661 |
3 |
+ |
27661255 |
K562 |
viability |
GCAGGTACGTACCCAACCATGGG |
TREX1 |
ENSG00000213689 |
0.050947675949906346 |
[1681,1741] |
[1519,1326] |
1 |
dCas9-KRAB |
negative selection |
5519578 |
48466275 |
48466298 |
3 |
- |
27661255 |
K562 |
viability |
GCAGGCAGGCAGTAGTGACTCGG |
TREX1 |
ENSG00000213689 |
0.15576569558533965 |
[914,973] |
[953,741] |
5 |
dCas9-KRAB |
negative selection |
5519579 |
48467196 |
48467219 |
3 |
+ |
27260156 |
BXPC3 |
viability |
AGCATCTACACTCGCCTGTATGG |
TREX1 |
ENSG00000213689 |
0.3815833117339017 |
[455] |
[529,627,648,691] |
7 |
hSpCas9 |
negative selection |
5577453 |
48466823 |
48466846 |
3 |
+ |
27260156 |
BXPC3 |
viability |
AGTTCCTCCACCACCGCGTGTGG |
TREX1 |
ENSG00000213689 |
-0.09233478579776744 |
[1063] |
[906,1133,993,1153] |
-2 |
hSpCas9 |
negative selection |
5577454 |
48467229 |
48467252 |
3 |
- |
27260156 |
BXPC3 |
viability |
CCCTCAGCCGTGTGCGAGTCTGG |
TREX1 |
ENSG00000213689 |
0.19216824668851262 |
[683] |
[762,748,687,1105] |
4 |
hSpCas9 |
negative selection |
5577455 |
48467114 |
48467137 |
3 |
+ |
27260156 |
BXPC3 |
viability |
GGATAGCATCACTGCGCTGAAGG |
TREX1 |
ENSG00000213689 |
-0.21158581799300852 |
[366] |
[284,331,331,385] |
-5 |
hSpCas9 |
negative selection |
5641701 |
48467222 |
48467245 |
3 |
+ |
27260156 |
BXPC3 |
viability |
GTCCCCTCCAGACTCGCACACGG |
TREX1 |
ENSG00000213689 |
0.1673271378060488 |
[317] |
[366,294,353,494] |
3 |
hSpCas9 |
negative selection |
5641702 |
48466836 |
48466859 |
3 |
- |
27260156 |
BXPC3 |
viability |
GAGAGCTTGTCTACCACACGCGG |
TREX1 |
ENSG00000213689 |
-0.0956148320498002 |
[617] |
[544,612,564,709] |
-2 |
hSpCas9 |
negative selection |
5641703 |
48467196 |
48467219 |
3 |
+ |
27260156 |
A673 |
viability |
AGCATCTACACTCGCCTGTATGG |
TREX1 |
ENSG00000213689 |
-0.28896252235190517 |
[455] |
[431,492,385,479] |
-6 |
hSpCas9 |
negative selection |
5698704 |
48466823 |
48466846 |
3 |
+ |
27260156 |
A673 |
viability |
AGTTCCTCCACCACCGCGTGTGG |
TREX1 |
ENSG00000213689 |
0.03710405265195882 |
[1063] |
[1380,1268,1335,1260] |
0 |
hSpCas9 |
negative selection |
5698705 |
48467229 |
48467252 |
3 |
- |
27260156 |
A673 |
viability |
CCCTCAGCCGTGTGCGAGTCTGG |
TREX1 |
ENSG00000213689 |
0.2291948940973586 |
[683] |
[1072,850,983,955] |
5 |
hSpCas9 |
negative selection |
5698706 |
48467114 |
48467137 |
3 |
+ |
27260156 |
A673 |
viability |
GGATAGCATCACTGCGCTGAAGG |
TREX1 |
ENSG00000213689 |
-0.09600182998260265 |
[366] |
[463,317,437,437] |
-2 |
hSpCas9 |
negative selection |
5762952 |
48467222 |
48467245 |
3 |
+ |
27260156 |
A673 |
viability |
GTCCCCTCCAGACTCGCACACGG |
TREX1 |
ENSG00000213689 |
0.29019316538346285 |
[317] |
[630,502,333,414] |
6 |
hSpCas9 |
negative selection |
5762953 |
48466836 |
48466859 |
3 |
- |
27260156 |
A673 |
viability |
GAGAGCTTGTCTACCACACGCGG |
TREX1 |
ENSG00000213689 |
0.10491398075459757 |
[617] |
[762,846,694,885] |
2 |
hSpCas9 |
negative selection |
5762954 |
48467196 |
48467219 |
3 |
+ |
27260156 |
A375 |
viability |
AGCATCTACACTCGCCTGTATGG |
TREX1 |
ENSG00000213689 |
0.044132582788855 |
[455] |
[569,581,514,533] |
0 |
hSpCas9 |
negative selection |
5819955 |
48466823 |
48466846 |
3 |
+ |
27260156 |
A375 |
viability |
AGTTCCTCCACCACCGCGTGTGG |
TREX1 |
ENSG00000213689 |
-0.35866925499129687 |
[1063] |
[913,881,933,1112] |
-5 |
hSpCas9 |
negative selection |
5819956 |
48467229 |
48467252 |
3 |
- |
27260156 |
A375 |
viability |
CCCTCAGCCGTGTGCGAGTCTGG |
TREX1 |
ENSG00000213689 |
-0.026240194751980916 |
[683] |
[595,1027,717,820] |
0 |
hSpCas9 |
negative selection |
5819957 |
48467114 |
48467137 |
3 |
+ |
27260156 |
A375 |
viability |
GGATAGCATCACTGCGCTGAAGG |
TREX1 |
ENSG00000213689 |
-0.028231828252359148 |
[366] |
[533,536,345,294] |
0 |
hSpCas9 |
negative selection |
5884203 |
48467222 |
48467245 |
3 |
+ |
27260156 |
A375 |
viability |
GTCCCCTCCAGACTCGCACACGG |
TREX1 |
ENSG00000213689 |
0.14446227339904932 |
[317] |
[468,469,472,255] |
2 |
hSpCas9 |
negative selection |
5884204 |
48466836 |
48466859 |
3 |
- |
27260156 |
A375 |
viability |
GAGAGCTTGTCTACCACACGCGG |
TREX1 |
ENSG00000213689 |
-0.24423599947038047 |
[617] |
[578,833,570,495] |
-4 |
hSpCas9 |
negative selection |
5884205 |
48467196 |
48467219 |
3 |
+ |
27260156 |
COLO741 |
viability |
AGCATCTACACTCGCCTGTATGG |
TREX1 |
ENSG00000213689 |
-0.3378727873618213 |
[455] |
[460,474,446] |
-6 |
hSpCas9 |
negative selection |
5941206 |
48466823 |
48466846 |
3 |
+ |
27260156 |
COLO741 |
viability |
AGTTCCTCCACCACCGCGTGTGG |
TREX1 |
ENSG00000213689 |
-0.04273300454287687 |
[1063] |
[1504,1219,1251] |
-1 |
hSpCas9 |
negative selection |
5941207 |
48467229 |
48467252 |
3 |
- |
27260156 |
COLO741 |
viability |
CCCTCAGCCGTGTGCGAGTCTGG |
TREX1 |
ENSG00000213689 |
0.33180315820368744 |
[683] |
[961,1168,1150] |
7 |
hSpCas9 |
negative selection |
5941208 |
48467114 |
48467137 |
3 |
+ |
27260156 |
COLO741 |
viability |
GGATAGCATCACTGCGCTGAAGG |
TREX1 |
ENSG00000213689 |
-0.08523971129282437 |
[366] |
[517,491,329] |
-2 |
hSpCas9 |
negative selection |
6005454 |
48467222 |
48467245 |
3 |
+ |
27260156 |
COLO741 |
viability |
GTCCCCTCCAGACTCGCACACGG |
TREX1 |
ENSG00000213689 |
0.303671585516885 |
[317] |
[503,475,521] |
6 |
hSpCas9 |
negative selection |
6005455 |
48466836 |
48466859 |
3 |
- |
27260156 |
COLO741 |
viability |
GAGAGCTTGTCTACCACACGCGG |
TREX1 |
ENSG00000213689 |
-0.1269364570161715 |
[617] |
[802,768,610] |
-3 |
hSpCas9 |
negative selection |
6005456 |
48467196 |
48467219 |
3 |
+ |
27260156 |
CAL120 |
viability |
AGCATCTACACTCGCCTGTATGG |
TREX1 |
ENSG00000213689 |
-0.38274885677517323 |
[455] |
[425,382,493] |
-5 |
hSpCas9 |
negative selection |
6062457 |
48466823 |
48466846 |
3 |
+ |
27260156 |
CAL120 |
viability |
AGTTCCTCCACCACCGCGTGTGG |
TREX1 |
ENSG00000213689 |
-0.4876125449373301 |
[1063] |
[1155,1078,634] |
-6 |
hSpCas9 |
negative selection |
6062458 |
48467229 |
48467252 |
3 |
- |
27260156 |
CAL120 |
viability |
CCCTCAGCCGTGTGCGAGTCTGG |
TREX1 |
ENSG00000213689 |
0.444641279338028 |
[683] |
[1244,1096,1145] |
6 |
hSpCas9 |
negative selection |
6062459 |
48467114 |
48467137 |
3 |
+ |
27260156 |
CAL120 |
viability |
GGATAGCATCACTGCGCTGAAGG |
TREX1 |
ENSG00000213689 |
-0.06935736290580768 |
[366] |
[396,644,260] |
-1 |
hSpCas9 |
negative selection |
6126705 |
48467222 |
48467245 |
3 |
+ |
27260156 |
CAL120 |
viability |
GTCCCCTCCAGACTCGCACACGG |
TREX1 |
ENSG00000213689 |
0.007218823797497831 |
[317] |
[750,259,237] |
0 |
hSpCas9 |
negative selection |
6126706 |
48466836 |
48466859 |
3 |
- |
27260156 |
CAL120 |
viability |
GAGAGCTTGTCTACCACACGCGG |
TREX1 |
ENSG00000213689 |
-0.8505090621426535 |
[617] |
[405,430,438] |
-8 |
hSpCas9 |
negative selection |
6126707 |
48467196 |
48467219 |
3 |
+ |
27260156 |
CADOES1 |
viability |
AGCATCTACACTCGCCTGTATGG |
TREX1 |
ENSG00000213689 |
-0.3760819953150789 |
[455] |
[314,347,322,320] |
-6 |
hSpCas9 |
negative selection |
6183708 |
48466823 |
48466846 |
3 |
+ |
27260156 |
CADOES1 |
viability |
AGTTCCTCCACCACCGCGTGTGG |
TREX1 |
ENSG00000213689 |
-0.18268334096461136 |
[1063] |
[794,773,1058,858] |
-3 |
hSpCas9 |
negative selection |
6183709 |
48467229 |
48467252 |
3 |
- |
27260156 |
CADOES1 |
viability |
CCCTCAGCCGTGTGCGAGTCTGG |
TREX1 |
ENSG00000213689 |
0.45930502458271727 |
[683] |
[1034,808,907,740] |
7 |
hSpCas9 |
negative selection |
6183710 |
48467114 |
48467137 |
3 |
+ |
27260156 |
CADOES1 |
viability |
GGATAGCATCACTGCGCTGAAGG |
TREX1 |
ENSG00000213689 |
0.06766848234937262 |
[366] |
[279,314,502,331] |
1 |
hSpCas9 |
negative selection |
6247956 |
48467222 |
48467245 |
3 |
+ |
27260156 |
CADOES1 |
viability |
GTCCCCTCCAGACTCGCACACGG |
TREX1 |
ENSG00000213689 |
-0.33677584616771217 |
[317] |
[266,152,166,353] |
-5 |
hSpCas9 |
negative selection |
6247957 |
48466836 |
48466859 |
3 |
- |
27260156 |
CADOES1 |
viability |
GAGAGCTTGTCTACCACACGCGG |
TREX1 |
ENSG00000213689 |
-0.2479090207065565 |
[617] |
[395,333,440,775] |
-4 |
hSpCas9 |
negative selection |
6247958 |
48467196 |
48467219 |
3 |
+ |
27260156 |
EWS502 |
viability |
AGCATCTACACTCGCCTGTATGG |
TREX1 |
ENSG00000213689 |
-0.0454477348042784 |
[455] |
[440,472,388,576] |
-1 |
hSpCas9 |
negative selection |
6304959 |
48466823 |
48466846 |
3 |
+ |
27260156 |
EWS502 |
viability |
AGTTCCTCCACCACCGCGTGTGG |
TREX1 |
ENSG00000213689 |
-0.04426759929919499 |
[1063] |
[890,1080,1116,1319] |
-1 |
hSpCas9 |
negative selection |
6304960 |
48467229 |
48467252 |
3 |
- |
27260156 |
EWS502 |
viability |
CCCTCAGCCGTGTGCGAGTCTGG |
TREX1 |
ENSG00000213689 |
0.45144593464573846 |
[683] |
[972,762,1130,1113] |
7 |
hSpCas9 |
negative selection |
6304961 |
48467114 |
48467137 |
3 |
+ |
27260156 |
EWS502 |
viability |
GGATAGCATCACTGCGCTGAAGG |
TREX1 |
ENSG00000213689 |
-0.061993849232628795 |
[366] |
[333,306,272,595] |
-1 |
hSpCas9 |
negative selection |
6369207 |
48467222 |
48467245 |
3 |
+ |
27260156 |
EWS502 |
viability |
GTCCCCTCCAGACTCGCACACGG |
TREX1 |
ENSG00000213689 |
0.20916259596010017 |
[317] |
[262,245,589,487] |
3 |
hSpCas9 |
negative selection |
6369208 |
48466836 |
48466859 |
3 |
- |
27260156 |
EWS502 |
viability |
GAGAGCTTGTCTACCACACGCGG |
TREX1 |
ENSG00000213689 |
-0.04491260875477865 |
[617] |
[564,646,735,593] |
-1 |
hSpCas9 |
negative selection |
6369209 |
48467196 |
48467219 |
3 |
+ |
27260156 |
EW8 |
viability |
AGCATCTACACTCGCCTGTATGG |
TREX1 |
ENSG00000213689 |
-0.3482179106423385 |
[455] |
[296,290,314,253] |
-6 |
hSpCas9 |
negative selection |
6426210 |
48466823 |
48466846 |
3 |
+ |
27260156 |
EW8 |
viability |
AGTTCCTCCACCACCGCGTGTGG |
TREX1 |
ENSG00000213689 |
0.0406249597477899 |
[1063] |
[951,924,752,944] |
0 |
hSpCas9 |
negative selection |
6426211 |
48467229 |
48467252 |
3 |
- |
27260156 |
EW8 |
viability |
CCCTCAGCCGTGTGCGAGTCTGG |
TREX1 |
ENSG00000213689 |
0.23294410104997132 |
[683] |
[708,607,597,703] |
4 |
hSpCas9 |
negative selection |
6426212 |
48467114 |
48467137 |
3 |
+ |
27260156 |
EW8 |
viability |
GGATAGCATCACTGCGCTGAAGG |
TREX1 |
ENSG00000213689 |
-0.1536857601149006 |
[366] |
[293,276,337,150] |
-3 |
hSpCas9 |
negative selection |
6490458 |
48467222 |
48467245 |
3 |
+ |
27260156 |
EW8 |
viability |
GTCCCCTCCAGACTCGCACACGG |
TREX1 |
ENSG00000213689 |
0.24488983984394808 |
[317] |
[456,238,204,352] |
4 |
hSpCas9 |
negative selection |
6490459 |
48466836 |
48466859 |
3 |
- |
27260156 |
EW8 |
viability |
GAGAGCTTGTCTACCACACGCGG |
TREX1 |
ENSG00000213689 |
-0.034726469510608926 |
[617] |
[559,516,413,483] |
0 |
hSpCas9 |
negative selection |
6490460 |
48467196 |
48467219 |
3 |
+ |
27260156 |
CORL105 |
viability |
AGCATCTACACTCGCCTGTATGG |
TREX1 |
ENSG00000213689 |
0.5357913757295941 |
[455] |
[625,715,963,814] |
8 |
hSpCas9 |
negative selection |
6547461 |
48466823 |
48466846 |
3 |
+ |
27260156 |
CORL105 |
viability |
AGTTCCTCCACCACCGCGTGTGG |
TREX1 |
ENSG00000213689 |
-0.09778797196548727 |
[1063] |
[1167,1018,1270,1216] |
-2 |
hSpCas9 |
negative selection |
6547462 |
48467229 |
48467252 |
3 |
- |
27260156 |
CORL105 |
viability |
CCCTCAGCCGTGTGCGAGTCTGG |
TREX1 |
ENSG00000213689 |
0.2869268722020889 |
[683] |
[1261,926,950,774] |
5 |
hSpCas9 |
negative selection |
6547463 |
48467114 |
48467137 |
3 |
+ |
27260156 |
CORL105 |
viability |
GGATAGCATCACTGCGCTGAAGG |
TREX1 |
ENSG00000213689 |
-0.41183747227821693 |
[366] |
[357,264,385,294] |
-6 |
hSpCas9 |
negative selection |
6611709 |
48467222 |
48467245 |
3 |
+ |
27260156 |
CORL105 |
viability |
GTCCCCTCCAGACTCGCACACGG |
TREX1 |
ENSG00000213689 |
0.32168033024539455 |
[317] |
[441,503,543,381] |
6 |
hSpCas9 |
negative selection |
6611710 |
48466836 |
48466859 |
3 |
- |
27260156 |
CORL105 |
viability |
GAGAGCTTGTCTACCACACGCGG |
TREX1 |
ENSG00000213689 |
-0.09094629080909145 |
[617] |
[591,580,853,715] |
-2 |
hSpCas9 |
negative selection |
6611711 |
48467196 |
48467219 |
3 |
+ |
27260156 |
HS294T |
viability |
AGCATCTACACTCGCCTGTATGG |
TREX1 |
ENSG00000213689 |
0.583241349143514 |
[455] |
[245,185,254,394] |
7 |
hSpCas9 |
negative selection |
6668712 |
48466823 |
48466846 |
3 |
+ |
27260156 |
HS294T |
viability |
AGTTCCTCCACCACCGCGTGTGG |
TREX1 |
ENSG00000213689 |
-0.557269795484605 |
[1063] |
[268,278,282,288] |
-7 |
hSpCas9 |
negative selection |
6668713 |
48467229 |
48467252 |
3 |
- |
27260156 |
HS294T |
viability |
CCCTCAGCCGTGTGCGAGTCTGG |
TREX1 |
ENSG00000213689 |
0.6353915789240665 |
[683] |
[648,381,265,304] |
8 |
hSpCas9 |
negative selection |
6668714 |
48467114 |
48467137 |
3 |
+ |
27260156 |
HS294T |
viability |
GGATAGCATCACTGCGCTGAAGG |
TREX1 |
ENSG00000213689 |
-0.4400856705954314 |
[366] |
[84,123,116,90] |
-6 |
hSpCas9 |
negative selection |
6732960 |
48467222 |
48467245 |
3 |
+ |
27260156 |
HS294T |
viability |
GTCCCCTCCAGACTCGCACACGG |
TREX1 |
ENSG00000213689 |
0.2106138720340026 |
[317] |
[75,177,76,262] |
3 |
hSpCas9 |
negative selection |
6732961 |
48466836 |
48466859 |
3 |
- |
27260156 |
HS294T |
viability |
GAGAGCTTGTCTACCACACGCGG |
TREX1 |
ENSG00000213689 |
-0.18462455013848492 |
[617] |
[237,186,194,219] |
-3 |
hSpCas9 |
negative selection |
6732962 |
48467196 |
48467219 |
3 |
+ |
27260156 |
HCC44 |
viability |
AGCATCTACACTCGCCTGTATGG |
TREX1 |
ENSG00000213689 |
-0.29738659695076464 |
[455] |
[365,511,288,465] |
-5 |
hSpCas9 |
negative selection |
6789963 |
48466823 |
48466846 |
3 |
+ |
27260156 |
HCC44 |
viability |
AGTTCCTCCACCACCGCGTGTGG |
TREX1 |
ENSG00000213689 |
-0.11522115942549149 |
[1063] |
[1549,659,1196,1145] |
-2 |
hSpCas9 |
negative selection |
6789964 |
48467229 |
48467252 |
3 |
- |
27260156 |
HCC44 |
viability |
CCCTCAGCCGTGTGCGAGTCTGG |
TREX1 |
ENSG00000213689 |
0.18337005890830405 |
[683] |
[833,895,935,844] |
3 |
hSpCas9 |
negative selection |
6789965 |
48467114 |
48467137 |
3 |
+ |
27260156 |
HCC44 |
viability |
GGATAGCATCACTGCGCTGAAGG |
TREX1 |
ENSG00000213689 |
-0.3289670840395777 |
[366] |
[357,253,407,325] |
-5 |
hSpCas9 |
negative selection |
6854211 |
48467222 |
48467245 |
3 |
+ |
27260156 |
HCC44 |
viability |
GTCCCCTCCAGACTCGCACACGG |
TREX1 |
ENSG00000213689 |
-0.17012556466510476 |
[317] |
[380,341,253,290] |
-3 |
hSpCas9 |
negative selection |
6854212 |
48466836 |
48466859 |
3 |
- |
27260156 |
HCC44 |
viability |
GAGAGCTTGTCTACCACACGCGG |
TREX1 |
ENSG00000213689 |
0.22017027130866024 |
[617] |
[1132,665,806,696] |
3 |
hSpCas9 |
negative selection |
6854213 |
48467196 |
48467219 |
3 |
+ |
27260156 |
G402 |
viability |
AGCATCTACACTCGCCTGTATGG |
TREX1 |
ENSG00000213689 |
-0.3050005321381634 |
[455] |
[518,392,605,295] |
-4 |
hSpCas9 |
negative selection |
6911214 |
48466823 |
48466846 |
3 |
+ |
27260156 |
G402 |
viability |
AGTTCCTCCACCACCGCGTGTGG |
TREX1 |
ENSG00000213689 |
0.1642775700233936 |
[1063] |
[1783,948,1559,1534] |
2 |
hSpCas9 |
negative selection |
6911215 |
48467229 |
48467252 |
3 |
- |
27260156 |
G402 |
viability |
CCCTCAGCCGTGTGCGAGTCTGG |
TREX1 |
ENSG00000213689 |
0.6004327472244677 |
[683] |
[1351,1092,1512,1108] |
7 |
hSpCas9 |
negative selection |
6911216 |
48467114 |
48467137 |
3 |
+ |
27260156 |
G402 |
viability |
GGATAGCATCACTGCGCTGAAGG |
TREX1 |
ENSG00000213689 |
-0.6554826469186008 |
[366] |
[256,292,241,337] |
-7 |
hSpCas9 |
negative selection |
6975462 |
48467222 |
48467245 |
3 |
+ |
27260156 |
G402 |
viability |
GTCCCCTCCAGACTCGCACACGG |
TREX1 |
ENSG00000213689 |
0.3258623812656162 |
[317] |
[800,310,469,400] |
4 |
hSpCas9 |
negative selection |
6975463 |
48466836 |
48466859 |
3 |
- |
27260156 |
G402 |
viability |
GAGAGCTTGTCTACCACACGCGG |
TREX1 |
ENSG00000213689 |
-0.29975692286442773 |
[617] |
[705,500,718,532] |
-4 |
hSpCas9 |
negative selection |
6975464 |
48467196 |
48467219 |
3 |
+ |
27260156 |
L33 |
viability |
AGCATCTACACTCGCCTGTATGG |
TREX1 |
ENSG00000213689 |
0.5513508614458593 |
[455] |
[592,254,449,742] |
9 |
hSpCas9 |
negative selection |
7032465 |
48466823 |
48466846 |
3 |
+ |
27260156 |
L33 |
viability |
AGTTCCTCCACCACCGCGTGTGG |
TREX1 |
ENSG00000213689 |
-0.1707888606104031 |
[1063] |
[889,394,559,1035] |
-4 |
hSpCas9 |
negative selection |
7032466 |
48467229 |
48467252 |
3 |
- |
27260156 |
L33 |
viability |
CCCTCAGCCGTGTGCGAGTCTGG |
TREX1 |
ENSG00000213689 |
0.00849612547075751 |
[683] |
[752,220,380,849] |
0 |
hSpCas9 |
negative selection |
7032467 |
48467114 |
48467137 |
3 |
+ |
27260156 |
L33 |
viability |
GGATAGCATCACTGCGCTGAAGG |
TREX1 |
ENSG00000213689 |
0.009166371369930648 |
[366] |
[353,186,178,381] |
0 |
hSpCas9 |
negative selection |
7096713 |
48467222 |
48467245 |
3 |
+ |
27260156 |
L33 |
viability |
GTCCCCTCCAGACTCGCACACGG |
TREX1 |
ENSG00000213689 |
-0.24039366486630986 |
[317] |
[272,141,131,246] |
-5 |
hSpCas9 |
negative selection |
7096714 |
48466836 |
48466859 |
3 |
- |
27260156 |
L33 |
viability |
GAGAGCTTGTCTACCACACGCGG |
TREX1 |
ENSG00000213689 |
-0.35576552759324714 |
[617] |
[477,232,256,475] |
-7 |
hSpCas9 |
negative selection |
7096715 |
48467196 |
48467219 |
3 |
+ |
27260156 |
K562 |
viability |
AGCATCTACACTCGCCTGTATGG |
TREX1 |
ENSG00000213689 |
-0.004421822345330603 |
[455] |
[417,306,421,454] |
0 |
hSpCas9 |
negative selection |
7153716 |
48466823 |
48466846 |
3 |
+ |
27260156 |
K562 |
viability |
AGTTCCTCCACCACCGCGTGTGG |
TREX1 |
ENSG00000213689 |
0.051412736128562786 |
[1063] |
[1078,1225,1260,429] |
0 |
hSpCas9 |
negative selection |
7153717 |
48467229 |
48467252 |
3 |
- |
27260156 |
K562 |
viability |
CCCTCAGCCGTGTGCGAGTCTGG |
TREX1 |
ENSG00000213689 |
0.6813809363969938 |
[683] |
[1307,890,856,868] |
8 |
hSpCas9 |
negative selection |
7153718 |
48467114 |
48467137 |
3 |
+ |
27260156 |
K562 |
viability |
GGATAGCATCACTGCGCTGAAGG |
TREX1 |
ENSG00000213689 |
0.13276208361184083 |
[366] |
[499,355,192,385] |
1 |
hSpCas9 |
negative selection |
7217964 |
48467222 |
48467245 |
3 |
+ |
27260156 |
K562 |
viability |
GTCCCCTCCAGACTCGCACACGG |
TREX1 |
ENSG00000213689 |
0.8329104843789114 |
[317] |
[868,440,313,420] |
9 |
hSpCas9 |
negative selection |
7217965 |
48466836 |
48466859 |
3 |
- |
27260156 |
K562 |
viability |
GAGAGCTTGTCTACCACACGCGG |
TREX1 |
ENSG00000213689 |
-0.889913810908548 |
[617] |
[244,489,236,224] |
-7 |
hSpCas9 |
negative selection |
7217966 |
48467196 |
48467219 |
3 |
+ |
27260156 |
HT29 |
viability |
AGCATCTACACTCGCCTGTATGG |
TREX1 |
ENSG00000213689 |
-0.25894450514402245 |
[455] |
[376,467,468,521] |
-5 |
hSpCas9 |
negative selection |
7274967 |
48466823 |
48466846 |
3 |
+ |
27260156 |
HT29 |
viability |
AGTTCCTCCACCACCGCGTGTGG |
TREX1 |
ENSG00000213689 |
0.06558714585050396 |
[1063] |
[1239,1324,1409,1410] |
1 |
hSpCas9 |
negative selection |
7274968 |
48467229 |
48467252 |
3 |
- |
27260156 |
HT29 |
viability |
CCCTCAGCCGTGTGCGAGTCTGG |
TREX1 |
ENSG00000213689 |
0.11918074183139582 |
[683] |
[969,1028,874,764] |
2 |
hSpCas9 |
negative selection |
7274969 |
48467114 |
48467137 |
3 |
+ |
27260156 |
HT29 |
viability |
GGATAGCATCACTGCGCTGAAGG |
TREX1 |
ENSG00000213689 |
-0.050478139366940455 |
[366] |
[427,438,480,378] |
-1 |
hSpCas9 |
negative selection |
7339215 |
48467222 |
48467245 |
3 |
+ |
27260156 |
HT29 |
viability |
GTCCCCTCCAGACTCGCACACGG |
TREX1 |
ENSG00000213689 |
0.34830794018972755 |
[317] |
[563,386,433,566] |
6 |
hSpCas9 |
negative selection |
7339216 |
48466836 |
48466859 |
3 |
- |
27260156 |
HT29 |
viability |
GAGAGCTTGTCTACCACACGCGG |
TREX1 |
ENSG00000213689 |
0.08704080284004279 |
[617] |
[631,1112,815,656] |
1 |
hSpCas9 |
negative selection |
7339217 |
48467196 |
48467219 |
3 |
+ |
27260156 |
MHHES1 |
viability |
AGCATCTACACTCGCCTGTATGG |
TREX1 |
ENSG00000213689 |
-0.13315218027196812 |
[455] |
[491,358,456,530] |
-2 |
hSpCas9 |
negative selection |
7396218 |
48466823 |
48466846 |
3 |
+ |
27260156 |
MHHES1 |
viability |
AGTTCCTCCACCACCGCGTGTGG |
TREX1 |
ENSG00000213689 |
0.06817798300772382 |
[1063] |
[1154,1435,1349,1098] |
1 |
hSpCas9 |
negative selection |
7396219 |
48467229 |
48467252 |
3 |
- |
27260156 |
MHHES1 |
viability |
CCCTCAGCCGTGTGCGAGTCTGG |
TREX1 |
ENSG00000213689 |
0.2254828166233932 |
[683] |
[1091,909,1083,593] |
4 |
hSpCas9 |
negative selection |
7396220 |
48467114 |
48467137 |
3 |
+ |
27260156 |
MHHES1 |
viability |
GGATAGCATCACTGCGCTGAAGG |
TREX1 |
ENSG00000213689 |
-0.001378454035411092 |
[366] |
[425,488,424,330] |
0 |
hSpCas9 |
negative selection |
7460466 |
48467222 |
48467245 |
3 |
+ |
27260156 |
MHHES1 |
viability |
GTCCCCTCCAGACTCGCACACGG |
TREX1 |
ENSG00000213689 |
0.0166174282479451 |
[317] |
[494,359,426,210] |
0 |
hSpCas9 |
negative selection |
7460467 |
48466836 |
48466859 |
3 |
- |
27260156 |
MHHES1 |
viability |
GAGAGCTTGTCTACCACACGCGG |
TREX1 |
ENSG00000213689 |
-0.18025075528219894 |
[617] |
[645,568,718,528] |
-3 |
hSpCas9 |
negative selection |
7460468 |
48467196 |
48467219 |
3 |
+ |
27260156 |
MEWO |
viability |
AGCATCTACACTCGCCTGTATGG |
TREX1 |
ENSG00000213689 |
-0.3163678554999978 |
[455] |
[434,271,338] |
-6 |
hSpCas9 |
negative selection |
7517469 |
48466823 |
48466846 |
3 |
+ |
27260156 |
MEWO |
viability |
AGTTCCTCCACCACCGCGTGTGG |
TREX1 |
ENSG00000213689 |
0.180364630951378 |
[1063] |
[1306,1010,1100] |
4 |
hSpCas9 |
negative selection |
7517470 |
48467229 |
48467252 |
3 |
- |
27260156 |
MEWO |
viability |
CCCTCAGCCGTGTGCGAGTCTGG |
TREX1 |
ENSG00000213689 |
0.08470545495336057 |
[683] |
[864,641,564] |
1 |
hSpCas9 |
negative selection |
7517471 |
48467114 |
48467137 |
3 |
+ |
27260156 |
MEWO |
viability |
GGATAGCATCACTGCGCTGAAGG |
TREX1 |
ENSG00000213689 |
-0.15841249387093742 |
[366] |
[399,258,281] |
-3 |
hSpCas9 |
negative selection |
7581717 |
48467222 |
48467245 |
3 |
+ |
27260156 |
MEWO |
viability |
GTCCCCTCCAGACTCGCACACGG |
TREX1 |
ENSG00000213689 |
1.0065814661368198 |
[317] |
[677,521,608] |
9 |
hSpCas9 |
negative selection |
7581718 |
48466836 |
48466859 |
3 |
- |
27260156 |
MEWO |
viability |
GAGAGCTTGTCTACCACACGCGG |
TREX1 |
ENSG00000213689 |
0.06320573776737137 |
[617] |
[653,552,614] |
1 |
hSpCas9 |
negative selection |
7581719 |
48467196 |
48467219 |
3 |
+ |
27260156 |
LNCAPCLONEFGC |
viability |
AGCATCTACACTCGCCTGTATGG |
TREX1 |
ENSG00000213689 |
0.02131319163541562 |
[455] |
[470,388,475,349] |
0 |
hSpCas9 |
negative selection |
7638720 |
48466823 |
48466846 |
3 |
+ |
27260156 |
LNCAPCLONEFGC |
viability |
AGTTCCTCCACCACCGCGTGTGG |
TREX1 |
ENSG00000213689 |
-0.2649840652923098 |
[1063] |
[772,799,905,744] |
-4 |
hSpCas9 |
negative selection |
7638721 |
48467229 |
48467252 |
3 |
- |
27260156 |
LNCAPCLONEFGC |
viability |
CCCTCAGCCGTGTGCGAGTCTGG |
TREX1 |
ENSG00000213689 |
0.37308656896304837 |
[683] |
[927,662,720,891] |
6 |
hSpCas9 |
negative selection |
7638722 |
48467114 |
48467137 |
3 |
+ |
27260156 |
LNCAPCLONEFGC |
viability |
GGATAGCATCACTGCGCTGAAGG |
TREX1 |
ENSG00000213689 |
-0.3513654075085228 |
[366] |
[318,270,264,185] |
-5 |
hSpCas9 |
negative selection |
7702968 |
48467222 |
48467245 |
3 |
+ |
27260156 |
LNCAPCLONEFGC |
viability |
GTCCCCTCCAGACTCGCACACGG |
TREX1 |
ENSG00000213689 |
0.2598971234769793 |
[317] |
[372,314,284,398] |
4 |
hSpCas9 |
negative selection |
7702969 |
48466836 |
48466859 |
3 |
- |
27260156 |
LNCAPCLONEFGC |
viability |
GAGAGCTTGTCTACCACACGCGG |
TREX1 |
ENSG00000213689 |
-0.3040883078172574 |
[617] |
[440,328,642,436] |
-5 |
hSpCas9 |
negative selection |
7702970 |
48467196 |
48467219 |
3 |
+ |
27260156 |
PANC0327 |
viability |
AGCATCTACACTCGCCTGTATGG |
TREX1 |
ENSG00000213689 |
0.4984814205104195 |
[455] |
[738,343,614,633] |
7 |
hSpCas9 |
negative selection |
7759971 |
48466823 |
48466846 |
3 |
+ |
27260156 |
PANC0327 |
viability |
AGTTCCTCCACCACCGCGTGTGG |
TREX1 |
ENSG00000213689 |
-0.4784666958322912 |
[1063] |
[662,623,669,761] |
-6 |
hSpCas9 |
negative selection |
7759972 |
48467229 |
48467252 |
3 |
- |
27260156 |
PANC0327 |
viability |
CCCTCAGCCGTGTGCGAGTCTGG |
TREX1 |
ENSG00000213689 |
0.7129764653905926 |
[683] |
[1062,997,1053,873] |
8 |
hSpCas9 |
negative selection |
7759973 |
48467114 |
48467137 |
3 |
+ |
27260156 |
PANC0327 |
viability |
GGATAGCATCACTGCGCTGAAGG |
TREX1 |
ENSG00000213689 |
-0.22007222600487258 |
[366] |
[135,416,289,246] |
-3 |
hSpCas9 |
negative selection |
7824219 |
48467222 |
48467245 |
3 |
+ |
27260156 |
PANC0327 |
viability |
GTCCCCTCCAGACTCGCACACGG |
TREX1 |
ENSG00000213689 |
-0.01342246472841957 |
[317] |
[213,261,181,457] |
0 |
hSpCas9 |
negative selection |
7824220 |
48466836 |
48466859 |
3 |
- |
27260156 |
PANC0327 |
viability |
GAGAGCTTGTCTACCACACGCGG |
TREX1 |
ENSG00000213689 |
-0.18750303160292361 |
[617] |
[424,621,290,566] |
-3 |
hSpCas9 |
negative selection |
7824221 |
48467196 |
48467219 |
3 |
+ |
27260156 |
NCIH2009 |
viability |
AGCATCTACACTCGCCTGTATGG |
TREX1 |
ENSG00000213689 |
0.4693059589487742 |
[455] |
[1050,826,800] |
6 |
hSpCas9 |
negative selection |
7881222 |
48466823 |
48466846 |
3 |
+ |
27260156 |
NCIH2009 |
viability |
AGTTCCTCCACCACCGCGTGTGG |
TREX1 |
ENSG00000213689 |
-0.3619665785608386 |
[1063] |
[1434,1165,921] |
-5 |
hSpCas9 |
negative selection |
7881223 |
48467229 |
48467252 |
3 |
- |
27260156 |
NCIH2009 |
viability |
CCCTCAGCCGTGTGCGAGTCTGG |
TREX1 |
ENSG00000213689 |
0.5952539555064946 |
[683] |
[1639,1199,1531] |
7 |
hSpCas9 |
negative selection |
7881224 |
48467114 |
48467137 |
3 |
+ |
27260156 |
NCIH2009 |
viability |
GGATAGCATCACTGCGCTGAAGG |
TREX1 |
ENSG00000213689 |
0.01702643635320067 |
[366] |
[606,522,442] |
0 |
hSpCas9 |
negative selection |
7945470 |
48467222 |
48467245 |
3 |
+ |
27260156 |
NCIH2009 |
viability |
GTCCCCTCCAGACTCGCACACGG |
TREX1 |
ENSG00000213689 |
0.24274758239028238 |
[317] |
[658,612,328] |
3 |
hSpCas9 |
negative selection |
7945471 |
48466836 |
48466859 |
3 |
- |
27260156 |
NCIH2009 |
viability |
GAGAGCTTGTCTACCACACGCGG |
TREX1 |
ENSG00000213689 |
-0.4957831347498748 |
[617] |
[684,519,646] |
-6 |
hSpCas9 |
negative selection |
7945472 |
48467196 |
48467219 |
3 |
+ |
27260156 |
NCIH1373 |
viability |
AGCATCTACACTCGCCTGTATGG |
TREX1 |
ENSG00000213689 |
0.9819451838343367 |
[455] |
[1037,737,1132,305] |
8 |
hSpCas9 |
negative selection |
8002473 |
48466823 |
48466846 |
3 |
+ |
27260156 |
NCIH1373 |
viability |
AGTTCCTCCACCACCGCGTGTGG |
TREX1 |
ENSG00000213689 |
-0.2810102173872908 |
[1063] |
[1624,672,705,278] |
-3 |
hSpCas9 |
negative selection |
8002474 |
48467229 |
48467252 |
3 |
- |
27260156 |
NCIH1373 |
viability |
CCCTCAGCCGTGTGCGAGTCTGG |
TREX1 |
ENSG00000213689 |
0.45518627720546767 |
[683] |
[1678,742,791,295] |
4 |
hSpCas9 |
negative selection |
8002475 |
48467114 |
48467137 |
3 |
+ |
27260156 |
NCIH1373 |
viability |
GGATAGCATCACTGCGCTGAAGG |
TREX1 |
ENSG00000213689 |
0.11830121626880713 |
[366] |
[434,716,237,94] |
1 |
hSpCas9 |
negative selection |
8066721 |
48467222 |
48467245 |
3 |
+ |
27260156 |
NCIH1373 |
viability |
GTCCCCTCCAGACTCGCACACGG |
TREX1 |
ENSG00000213689 |
0.1770774581460206 |
[317] |
[527,572,115,104] |
1 |
hSpCas9 |
negative selection |
8066722 |
48466836 |
48466859 |
3 |
- |
27260156 |
NCIH1373 |
viability |
GAGAGCTTGTCTACCACACGCGG |
TREX1 |
ENSG00000213689 |
-0.7737507471951706 |
[617] |
[630,325,275,113] |
-7 |
hSpCas9 |
negative selection |
8066723 |
48467196 |
48467219 |
3 |
+ |
27260156 |
PATU8902 |
viability |
AGCATCTACACTCGCCTGTATGG |
TREX1 |
ENSG00000213689 |
0.9296387293800199 |
[455] |
[1290,957,983,1712] |
8 |
hSpCas9 |
negative selection |
8123724 |
48466823 |
48466846 |
3 |
+ |
27260156 |
PATU8902 |
viability |
AGTTCCTCCACCACCGCGTGTGG |
TREX1 |
ENSG00000213689 |
0.5014508294073174 |
[1063] |
[1402,2384,1683,3144] |
5 |
hSpCas9 |
negative selection |
8123725 |
48467229 |
48467252 |
3 |
- |
27260156 |
PATU8902 |
viability |
CCCTCAGCCGTGTGCGAGTCTGG |
TREX1 |
ENSG00000213689 |
1.0688940667281928 |
[683] |
[2364,1658,2120,1766] |
9 |
hSpCas9 |
negative selection |
8123726 |
48467114 |
48467137 |
3 |
+ |
27260156 |
PATU8902 |
viability |
GGATAGCATCACTGCGCTGAAGG |
TREX1 |
ENSG00000213689 |
0.10212144468231493 |
[366] |
[399,620,750,342] |
1 |
hSpCas9 |
negative selection |
8187972 |
48467222 |
48467245 |
3 |
+ |
27260156 |
PATU8902 |
viability |
GTCCCCTCCAGACTCGCACACGG |
TREX1 |
ENSG00000213689 |
0.3794956876011083 |
[317] |
[412,609,481,854] |
4 |
hSpCas9 |
negative selection |
8187973 |
48466836 |
48466859 |
3 |
- |
27260156 |
PATU8902 |
viability |
GAGAGCTTGTCTACCACACGCGG |
TREX1 |
ENSG00000213689 |
0.2755477017128008 |
[617] |
[1441,766,901,1082] |
3 |
hSpCas9 |
negative selection |
8187974 |
48467196 |
48467219 |
3 |
+ |
27260156 |
PANC1 |
viability |
AGCATCTACACTCGCCTGTATGG |
TREX1 |
ENSG00000213689 |
0.5937643939559898 |
[455] |
[569,552,881,379] |
8 |
hSpCas9 |
negative selection |
8244975 |
48466823 |
48466846 |
3 |
+ |
27260156 |
PANC1 |
viability |
AGTTCCTCCACCACCGCGTGTGG |
TREX1 |
ENSG00000213689 |
-0.4508667196175583 |
[1063] |
[585,725,709,656] |
-6 |
hSpCas9 |
negative selection |
8244976 |
48467229 |
48467252 |
3 |
- |
27260156 |
PANC1 |
viability |
CCCTCAGCCGTGTGCGAGTCTGG |
TREX1 |
ENSG00000213689 |
0.1865339717405312 |
[683] |
[734,797,546,615] |
3 |
hSpCas9 |
negative selection |
8244977 |
48467114 |
48467137 |
3 |
+ |
27260156 |
PANC1 |
viability |
GGATAGCATCACTGCGCTGAAGG |
TREX1 |
ENSG00000213689 |
-0.3487937816373267 |
[366] |
[291,294,172,235] |
-5 |
hSpCas9 |
negative selection |
8309223 |
48467222 |
48467245 |
3 |
+ |
27260156 |
PANC1 |
viability |
GTCCCCTCCAGACTCGCACACGG |
TREX1 |
ENSG00000213689 |
-0.23467345387603045 |
[317] |
[298,168,295,158] |
-4 |
hSpCas9 |
negative selection |
8309224 |
48466836 |
48466859 |
3 |
- |
27260156 |
PANC1 |
viability |
GAGAGCTTGTCTACCACACGCGG |
TREX1 |
ENSG00000213689 |
0.2099813662003674 |
[617] |
[616,800,585,498] |
3 |
hSpCas9 |
negative selection |
8309225 |
48467196 |
48467219 |
3 |
+ |
27260156 |
PANC0813 |
viability |
AGCATCTACACTCGCCTGTATGG |
TREX1 |
ENSG00000213689 |
0.6174374125333779 |
[455] |
[813,833,971,673] |
8 |
hSpCas9 |
negative selection |
8366226 |
48466823 |
48466846 |
3 |
+ |
27260156 |
PANC0813 |
viability |
AGTTCCTCCACCACCGCGTGTGG |
TREX1 |
ENSG00000213689 |
-0.34910563715078635 |
[1063] |
[1057,935,797,1128] |
-5 |
hSpCas9 |
negative selection |
8366227 |
48467229 |
48467252 |
3 |
- |
27260156 |
PANC0813 |
viability |
CCCTCAGCCGTGTGCGAGTCTGG |
TREX1 |
ENSG00000213689 |
0.23256690269688185 |
[683] |
[1053,991,933,811] |
4 |
hSpCas9 |
negative selection |
8366228 |
48467114 |
48467137 |
3 |
+ |
27260156 |
PANC0813 |
viability |
GGATAGCATCACTGCGCTGAAGG |
TREX1 |
ENSG00000213689 |
-0.4747831322555229 |
[366] |
[373,209,309,349] |
-6 |
hSpCas9 |
negative selection |
8430474 |
48467222 |
48467245 |
3 |
+ |
27260156 |
PANC0813 |
viability |
GTCCCCTCCAGACTCGCACACGG |
TREX1 |
ENSG00000213689 |
-0.027107093254247983 |
[317] |
[517,457,280,229] |
0 |
hSpCas9 |
negative selection |
8430475 |
48466836 |
48466859 |
3 |
- |
27260156 |
PANC0813 |
viability |
GAGAGCTTGTCTACCACACGCGG |
TREX1 |
ENSG00000213689 |
-0.32288504021042336 |
[617] |
[553,514,591,652] |
-5 |
hSpCas9 |
negative selection |
8430476 |
48467196 |
48467219 |
3 |
+ |
27260156 |
RDES |
viability |
AGCATCTACACTCGCCTGTATGG |
TREX1 |
ENSG00000213689 |
0.013178054990444457 |
[455] |
[480,597,524,492] |
0 |
hSpCas9 |
negative selection |
8487477 |
48466823 |
48466846 |
3 |
+ |
27260156 |
RDES |
viability |
AGTTCCTCCACCACCGCGTGTGG |
TREX1 |
ENSG00000213689 |
-0.17529441388359146 |
[1063] |
[902,1154,1131,1154] |
-3 |
hSpCas9 |
negative selection |
8487478 |
48467229 |
48467252 |
3 |
- |
27260156 |
RDES |
viability |
CCCTCAGCCGTGTGCGAGTCTGG |
TREX1 |
ENSG00000213689 |
0.4355688183483444 |
[683] |
[926,926,1160,1287] |
7 |
hSpCas9 |
negative selection |
8487479 |
48467114 |
48467137 |
3 |
+ |
27260156 |
RDES |
viability |
GGATAGCATCACTGCGCTGAAGG |
TREX1 |
ENSG00000213689 |
-0.019266686776906072 |
[366] |
[302,461,469,444] |
0 |
hSpCas9 |
negative selection |
8551725 |
48467222 |
48467245 |
3 |
+ |
27260156 |
RDES |
viability |
GTCCCCTCCAGACTCGCACACGG |
TREX1 |
ENSG00000213689 |
0.29162267167251404 |
[317] |
[460,391,554,359] |
5 |
hSpCas9 |
negative selection |
8551726 |
48466836 |
48466859 |
3 |
- |
27260156 |
RDES |
viability |
GAGAGCTTGTCTACCACACGCGG |
TREX1 |
ENSG00000213689 |
-0.2118857652987806 |
[617] |
[543,502,488,975] |
-4 |
hSpCas9 |
negative selection |
8551727 |
48467196 |
48467219 |
3 |
+ |
27260156 |
PC3 |
viability |
AGCATCTACACTCGCCTGTATGG |
TREX1 |
ENSG00000213689 |
-0.33354236964313805 |
[455] |
[222,336,541,441] |
-6 |
hSpCas9 |
negative selection |
8608728 |
48466823 |
48466846 |
3 |
+ |
27260156 |
PC3 |
viability |
AGTTCCTCCACCACCGCGTGTGG |
TREX1 |
ENSG00000213689 |
0.05560869272297175 |
[1063] |
[700,987,1971,1163] |
1 |
hSpCas9 |
negative selection |
8608729 |
48467229 |
48467252 |
3 |
- |
27260156 |
PC3 |
viability |
CCCTCAGCCGTGTGCGAGTCTGG |
TREX1 |
ENSG00000213689 |
0.08871746333975339 |
[683] |
[408,708,1244,818] |
2 |
hSpCas9 |
negative selection |
8608730 |
48467114 |
48467137 |
3 |
+ |
27260156 |
PC3 |
viability |
GGATAGCATCACTGCGCTGAAGG |
TREX1 |
ENSG00000213689 |
-0.04286634017424423 |
[366] |
[257,254,492,482] |
-1 |
hSpCas9 |
negative selection |
8672976 |
48467222 |
48467245 |
3 |
+ |
27260156 |
PC3 |
viability |
GTCCCCTCCAGACTCGCACACGG |
TREX1 |
ENSG00000213689 |
0.2594315766933694 |
[317] |
[221,226,938,392] |
5 |
hSpCas9 |
negative selection |
8672977 |
48466836 |
48466859 |
3 |
- |
27260156 |
PC3 |
viability |
GAGAGCTTGTCTACCACACGCGG |
TREX1 |
ENSG00000213689 |
-0.07154479908764616 |
[617] |
[352,695,821,605] |
-2 |
hSpCas9 |
negative selection |
8672978 |
48467196 |
48467219 |
3 |
+ |
27260156 |
PATU8988T |
viability |
AGCATCTACACTCGCCTGTATGG |
TREX1 |
ENSG00000213689 |
0.11047619469709076 |
[455] |
[406,562,533,399] |
2 |
hSpCas9 |
negative selection |
8729979 |
48466823 |
48466846 |
3 |
+ |
27260156 |
PATU8988T |
viability |
AGTTCCTCCACCACCGCGTGTGG |
TREX1 |
ENSG00000213689 |
-0.5103115880931257 |
[1063] |
[696,569,683,939] |
-7 |
hSpCas9 |
negative selection |
8729980 |
48467229 |
48467252 |
3 |
- |
27260156 |
PATU8988T |
viability |
CCCTCAGCCGTGTGCGAGTCTGG |
TREX1 |
ENSG00000213689 |
0.09804351724956994 |
[683] |
[679,606,682,862] |
1 |
hSpCas9 |
negative selection |
8729981 |
48467114 |
48467137 |
3 |
+ |
27260156 |
PATU8988T |
viability |
GGATAGCATCACTGCGCTGAAGG |
TREX1 |
ENSG00000213689 |
0.12165642747069644 |
[366] |
[149,294,546,553] |
2 |
hSpCas9 |
negative selection |
8794227 |
48467222 |
48467245 |
3 |
+ |
27260156 |
PATU8988T |
viability |
GTCCCCTCCAGACTCGCACACGG |
TREX1 |
ENSG00000213689 |
0.1880188644147614 |
[317] |
[208,464,448,280] |
3 |
hSpCas9 |
negative selection |
8794228 |
48466836 |
48466859 |
3 |
- |
27260156 |
PATU8988T |
viability |
GAGAGCTTGTCTACCACACGCGG |
TREX1 |
ENSG00000213689 |
-0.10566957226537216 |
[617] |
[603,510,583,512] |
-2 |
hSpCas9 |
negative selection |
8794229 |
48467196 |
48467219 |
3 |
+ |
27260156 |
T47D |
viability |
AGCATCTACACTCGCCTGTATGG |
TREX1 |
ENSG00000213689 |
-0.1650131983214937 |
[455] |
[457,461,473,502] |
-4 |
hSpCas9 |
negative selection |
8851230 |
48466823 |
48466846 |
3 |
+ |
27260156 |
T47D |
viability |
AGTTCCTCCACCACCGCGTGTGG |
TREX1 |
ENSG00000213689 |
-0.07939691327822018 |
[1063] |
[1269,1070,1072,1292] |
-2 |
hSpCas9 |
negative selection |
8851231 |
48467229 |
48467252 |
3 |
- |
27260156 |
T47D |
viability |
CCCTCAGCCGTGTGCGAGTCTGG |
TREX1 |
ENSG00000213689 |
0.2845607296213227 |
[683] |
[997,922,992,971] |
6 |
hSpCas9 |
negative selection |
8851232 |
48467114 |
48467137 |
3 |
+ |
27260156 |
T47D |
viability |
GGATAGCATCACTGCGCTGAAGG |
TREX1 |
ENSG00000213689 |
-0.08423599629007289 |
[366] |
[366,388,440,416] |
-2 |
hSpCas9 |
negative selection |
8915478 |
48467222 |
48467245 |
3 |
+ |
27260156 |
T47D |
viability |
GTCCCCTCCAGACTCGCACACGG |
TREX1 |
ENSG00000213689 |
0.17410426592469547 |
[317] |
[456,404,402,407] |
3 |
hSpCas9 |
negative selection |
8915479 |
48466836 |
48466859 |
3 |
- |
27260156 |
T47D |
viability |
GAGAGCTTGTCTACCACACGCGG |
TREX1 |
ENSG00000213689 |
-0.13482256563400224 |
[617] |
[681,609,605,731] |
-3 |
hSpCas9 |
negative selection |
8915480 |
48467196 |
48467219 |
3 |
+ |
27260156 |
SU8686 |
viability |
AGCATCTACACTCGCCTGTATGG |
TREX1 |
ENSG00000213689 |
0.5732818867492682 |
[455] |
[699,629,650,712] |
8 |
hSpCas9 |
negative selection |
8972481 |
48466823 |
48466846 |
3 |
+ |
27260156 |
SU8686 |
viability |
AGTTCCTCCACCACCGCGTGTGG |
TREX1 |
ENSG00000213689 |
-0.40088803443079446 |
[1063] |
[687,809,714,1021] |
-6 |
hSpCas9 |
negative selection |
8972482 |
48467229 |
48467252 |
3 |
- |
27260156 |
SU8686 |
viability |
CCCTCAGCCGTGTGCGAGTCTGG |
TREX1 |
ENSG00000213689 |
0.2351136345948387 |
[683] |
[783,663,767,1025] |
4 |
hSpCas9 |
negative selection |
8972483 |
48467114 |
48467137 |
3 |
+ |
27260156 |
SU8686 |
viability |
GGATAGCATCACTGCGCTGAAGG |
TREX1 |
ENSG00000213689 |
-0.18945113187648782 |
[366] |
[335,256,303,394] |
-3 |
hSpCas9 |
negative selection |
9036729 |
48467222 |
48467245 |
3 |
+ |
27260156 |
SU8686 |
viability |
GTCCCCTCCAGACTCGCACACGG |
TREX1 |
ENSG00000213689 |
0.009569373040535623 |
[317] |
[198,234,451,426] |
0 |
hSpCas9 |
negative selection |
9036730 |
48466836 |
48466859 |
3 |
- |
27260156 |
SU8686 |
viability |
GAGAGCTTGTCTACCACACGCGG |
TREX1 |
ENSG00000213689 |
-0.49943665328368547 |
[617] |
[349,316,427,703] |
-7 |
hSpCas9 |
negative selection |
9036731 |
48467196 |
48467219 |
3 |
+ |
27260156 |
SKES1 |
viability |
AGCATCTACACTCGCCTGTATGG |
TREX1 |
ENSG00000213689 |
-0.07218154402362334 |
[455] |
[382,521,470,361] |
-1 |
hSpCas9 |
negative selection |
9093732 |
48466823 |
48466846 |
3 |
+ |
27260156 |
SKES1 |
viability |
AGTTCCTCCACCACCGCGTGTGG |
TREX1 |
ENSG00000213689 |
-0.1786190583178937 |
[1063] |
[922,868,1000,936] |
-4 |
hSpCas9 |
negative selection |
9093733 |
48467229 |
48467252 |
3 |
- |
27260156 |
SKES1 |
viability |
CCCTCAGCCGTGTGCGAGTCTGG |
TREX1 |
ENSG00000213689 |
0.22578896966756234 |
[683] |
[897,985,716,638] |
5 |
hSpCas9 |
negative selection |
9093734 |
48467114 |
48467137 |
3 |
+ |
27260156 |
SKES1 |
viability |
GGATAGCATCACTGCGCTGAAGG |
TREX1 |
ENSG00000213689 |
-0.08740825085225856 |
[366] |
[436,436,267,266] |
-2 |
hSpCas9 |
negative selection |
9157980 |
48467222 |
48467245 |
3 |
+ |
27260156 |
SKES1 |
viability |
GTCCCCTCCAGACTCGCACACGG |
TREX1 |
ENSG00000213689 |
0.3958424887577661 |
[317] |
[447,438,393,393] |
7 |
hSpCas9 |
negative selection |
9157981 |
48466836 |
48466859 |
3 |
- |
27260156 |
SKES1 |
viability |
GAGAGCTTGTCTACCACACGCGG |
TREX1 |
ENSG00000213689 |
-0.0978224557917603 |
[617] |
[740,756,523,348] |
-2 |
hSpCas9 |
negative selection |
9157982 |
48467196 |
48467219 |
3 |
+ |
27260156 |
TOV112D |
viability |
AGCATCTACACTCGCCTGTATGG |
TREX1 |
ENSG00000213689 |
-0.4169802623193215 |
[455] |
[222,638,307,262] |
-7 |
hSpCas9 |
negative selection |
9214983 |
48466823 |
48466846 |
3 |
+ |
27260156 |
TOV112D |
viability |
AGTTCCTCCACCACCGCGTGTGG |
TREX1 |
ENSG00000213689 |
0.2832643632848453 |
[1063] |
[1557,1301,1324,1030] |
5 |
hSpCas9 |
negative selection |
9214984 |
48467229 |
48467252 |
3 |
- |
27260156 |
TOV112D |
viability |
CCCTCAGCCGTGTGCGAGTCTGG |
TREX1 |
ENSG00000213689 |
0.0635789548838076 |
[683] |
[831,1012,659,447] |
1 |
hSpCas9 |
negative selection |
9214985 |
48467114 |
48467137 |
3 |
+ |
27260156 |
TOV112D |
viability |
GGATAGCATCACTGCGCTGAAGG |
TREX1 |
ENSG00000213689 |
-0.558677560930881 |
[366] |
[242,391,136,259] |
-8 |
hSpCas9 |
negative selection |
9279231 |
48467222 |
48467245 |
3 |
+ |
27260156 |
TOV112D |
viability |
GTCCCCTCCAGACTCGCACACGG |
TREX1 |
ENSG00000213689 |
0.2913303761152192 |
[317] |
[438,680,333,185] |
5 |
hSpCas9 |
negative selection |
9279232 |
48466836 |
48466859 |
3 |
- |
27260156 |
TOV112D |
viability |
GAGAGCTTGTCTACCACACGCGG |
TREX1 |
ENSG00000213689 |
-0.3791352252431219 |
[617] |
[641,374,506,370] |
-6 |
hSpCas9 |
negative selection |
9279233 |
48467196 |
48467219 |
3 |
+ |
27260156 |
TC71 |
viability |
AGCATCTACACTCGCCTGTATGG |
TREX1 |
ENSG00000213689 |
-0.3827095719668248 |
[455] |
[359,405,363,369] |
-8 |
hSpCas9 |
negative selection |
9336234 |
48466823 |
48466846 |
3 |
+ |
27260156 |
TC71 |
viability |
AGTTCCTCCACCACCGCGTGTGG |
TREX1 |
ENSG00000213689 |
-0.19232851498844816 |
[1063] |
[988,1082,937,983] |
-5 |
hSpCas9 |
negative selection |
9336235 |
48467229 |
48467252 |
3 |
- |
27260156 |
TC71 |
viability |
CCCTCAGCCGTGTGCGAGTCTGG |
TREX1 |
ENSG00000213689 |
0.0654300028974818 |
[683] |
[837,745,626,866] |
1 |
hSpCas9 |
negative selection |
9336236 |
48467114 |
48467137 |
3 |
+ |
27260156 |
TC71 |
viability |
GGATAGCATCACTGCGCTGAAGG |
TREX1 |
ENSG00000213689 |
-0.10552534488038329 |
[366] |
[339,404,298,424] |
-3 |
hSpCas9 |
negative selection |
9400482 |
48467222 |
48467245 |
3 |
+ |
27260156 |
TC71 |
viability |
GTCCCCTCCAGACTCGCACACGG |
TREX1 |
ENSG00000213689 |
0.12803926929766407 |
[317] |
[347,356,334,456] |
3 |
hSpCas9 |
negative selection |
9400483 |
48466836 |
48466859 |
3 |
- |
27260156 |
TC71 |
viability |
GAGAGCTTGTCTACCACACGCGG |
TREX1 |
ENSG00000213689 |
-0.0673639075558975 |
[617] |
[682,693,505,649] |
-2 |
hSpCas9 |
negative selection |
9400484 |
48467196 |
48467219 |
3 |
+ |
27260156 |
TC32 |
viability |
AGCATCTACACTCGCCTGTATGG |
TREX1 |
ENSG00000213689 |
-0.5584273890379623 |
[455] |
[305,181,368,345] |
-8 |
hSpCas9 |
negative selection |
9457485 |
48466823 |
48466846 |
3 |
+ |
27260156 |
TC32 |
viability |
AGTTCCTCCACCACCGCGTGTGG |
TREX1 |
ENSG00000213689 |
-0.3453785310436033 |
[1063] |
[790,608,834,948] |
-6 |
hSpCas9 |
negative selection |
9457486 |
48467229 |
48467252 |
3 |
- |
27260156 |
TC32 |
viability |
CCCTCAGCCGTGTGCGAGTCTGG |
TREX1 |
ENSG00000213689 |
0.4559720404993213 |
[683] |
[620,968,1129,786] |
7 |
hSpCas9 |
negative selection |
9457487 |
48467114 |
48467137 |
3 |
+ |
27260156 |
TC32 |
viability |
GGATAGCATCACTGCGCTGAAGG |
TREX1 |
ENSG00000213689 |
0.19225460907769007 |
[366] |
[480,221,506,417] |
3 |
hSpCas9 |
negative selection |
9521733 |
48467222 |
48467245 |
3 |
+ |
27260156 |
TC32 |
viability |
GTCCCCTCCAGACTCGCACACGG |
TREX1 |
ENSG00000213689 |
0.051092704067454475 |
[317] |
[303,191,429,363] |
0 |
hSpCas9 |
negative selection |
9521734 |
48466836 |
48466859 |
3 |
- |
27260156 |
TC32 |
viability |
GAGAGCTTGTCTACCACACGCGG |
TREX1 |
ENSG00000213689 |
-0.2516908147316647 |
[617] |
[348,541,631,413] |
-4 |
hSpCas9 |
negative selection |
9521735 |
48466576 |
48466599 |
3 |
- |
27869803 |
HPAFII |
viability after 27 days |
GCCCAGTGTTAAGATCCGAAGGG |
TREX1 |
ENSG00000213689 |
-0.45702798750470774 |
[262] |
[151,57,NaN] |
-3 |
hSpCas9 |
negative selection |
9585157 |
48466577 |
48466600 |
3 |
- |
27869803 |
HPAFII |
viability after 27 days |
TGCCCAGTGTTAAGATCCGAAGG |
TREX1 |
ENSG00000213689 |
-0.06122133901943261 |
[244] |
[117,127,NaN] |
0 |
hSpCas9 |
negative selection |
9585158 |
48467050 |
48467073 |
3 |
- |
27869803 |
HPAFII |
viability after 27 days |
AGCCAGCTCTGCTTGGAGCAGGG |
TREX1 |
ENSG00000213689 |
-0.35462136219604795 |
[196] |
[74,85,NaN] |
-3 |
hSpCas9 |
negative selection |
9585159 |
48467414 |
48467437 |
3 |
- |
27869803 |
HPAFII |
viability after 27 days |
TAGTGTTCCTGGTTGTGGCCAGG |
TREX1 |
ENSG00000213689 |
1.037876822764402 |
[118] |
[140,117,NaN] |
8 |
hSpCas9 |
negative selection |
9585160 |
48467539 |
48467562 |
3 |
- |
27869803 |
HPAFII |
viability after 27 days |
GGCTACTGCCAAGGTCAGGATGG |
TREX1 |
ENSG00000213689 |
0.018701305673731072 |
[98] |
[49,54,NaN] |
0 |
hSpCas9 |
negative selection |
9585161 |
48466576 |
48466599 |
3 |
- |
27869803 |
HPAFII |
viability after 15 days |
GCCCAGTGTTAAGATCCGAAGGG |
TREX1 |
ENSG00000213689 |
0.05414971753423292 |
[262] |
[446,197,NaN] |
0 |
hSpCas9 |
negative selection |
9667606 |
48466577 |
48466600 |
3 |
- |
27869803 |
HPAFII |
viability after 15 days |
TGCCCAGTGTTAAGATCCGAAGG |
TREX1 |
ENSG00000213689 |
0.8024043540342091 |
[244] |
[584,380,NaN] |
8 |
hSpCas9 |
negative selection |
9667607 |
48467050 |
48467073 |
3 |
- |
27869803 |
HPAFII |
viability after 15 days |
AGCCAGCTCTGCTTGGAGCAGGG |
TREX1 |
ENSG00000213689 |
0.08767578574621243 |
[196] |
[269,196,NaN] |
1 |
hSpCas9 |
negative selection |
9667608 |
48467414 |
48467437 |
3 |
- |
27869803 |
HPAFII |
viability after 15 days |
TAGTGTTCCTGGTTGTGGCCAGG |
TREX1 |
ENSG00000213689 |
0.7181576568024871 |
[118] |
[321,140,NaN] |
7 |
hSpCas9 |
negative selection |
9667609 |
48467539 |
48467562 |
3 |
- |
27869803 |
HPAFII |
viability after 15 days |
GGCTACTGCCAAGGTCAGGATGG |
TREX1 |
ENSG00000213689 |
-0.11078749613766004 |
[98] |
[100,96,NaN] |
-1 |
hSpCas9 |
negative selection |
9667610 |
48466576 |
48466599 |
3 |
- |
27869803 |
ASPC1 |
viability after 36 days |
GCCCAGTGTTAAGATCCGAAGGG |
TREX1 |
ENSG00000213689 |
0.04305774718779589 |
[643] |
[206,371,134] |
0 |
hSpCas9 |
negative selection |
9750055 |
48466577 |
48466600 |
3 |
- |
27869803 |
ASPC1 |
viability after 36 days |
TGCCCAGTGTTAAGATCCGAAGG |
TREX1 |
ENSG00000213689 |
-0.9079723725691786 |
[671] |
[179,167,50] |
-7 |
hSpCas9 |
negative selection |
9750056 |
48467050 |
48467073 |
3 |
- |
27869803 |
ASPC1 |
viability after 36 days |
AGCCAGCTCTGCTTGGAGCAGGG |
TREX1 |
ENSG00000213689 |
-0.6183158270968874 |
[560] |
[8,311,62] |
-6 |
hSpCas9 |
negative selection |
9750057 |
48467414 |
48467437 |
3 |
- |
27869803 |
ASPC1 |
viability after 36 days |
TAGTGTTCCTGGTTGTGGCCAGG |
TREX1 |
ENSG00000213689 |
1.0494321824205333 |
[353] |
[366,86,308] |
8 |
hSpCas9 |
negative selection |
9750058 |
48467539 |
48467562 |
3 |
- |
27869803 |
ASPC1 |
viability after 36 days |
GGCTACTGCCAAGGTCAGGATGG |
TREX1 |
ENSG00000213689 |
0.7328663092862806 |
[250] |
[321,9,127] |
7 |
hSpCas9 |
negative selection |
9750059 |
48466576 |
48466599 |
3 |
- |
27869803 |
PATU8988S |
viability after 35 days |
GCCCAGTGTTAAGATCCGAAGGG |
TREX1 |
ENSG00000213689 |
-0.14112738766100175 |
[507] |
[198,171,NaN] |
-1 |
hSpCas9 |
negative selection |
9832504 |
48466577 |
48466600 |
3 |
- |
27869803 |
PATU8988S |
viability after 35 days |
TGCCCAGTGTTAAGATCCGAAGG |
TREX1 |
ENSG00000213689 |
0.8350905761483597 |
[541] |
[355,422,NaN] |
8 |
hSpCas9 |
negative selection |
9832505 |
48467050 |
48467073 |
3 |
- |
27869803 |
PATU8988S |
viability after 35 days |
AGCCAGCTCTGCTTGGAGCAGGG |
TREX1 |
ENSG00000213689 |
0.6444440941413209 |
[670] |
[391,452,NaN] |
7 |
hSpCas9 |
negative selection |
9832506 |
48467414 |
48467437 |
3 |
- |
27869803 |
PATU8988S |
viability after 35 days |
TAGTGTTCCTGGTTGTGGCCAGG |
TREX1 |
ENSG00000213689 |
-0.1374344451981936 |
[328] |
[104,135,NaN] |
-1 |
hSpCas9 |
negative selection |
9832507 |
48467539 |
48467562 |
3 |
- |
27869803 |
PATU8988S |
viability after 35 days |
GGCTACTGCCAAGGTCAGGATGG |
TREX1 |
ENSG00000213689 |
0.8018087197162328 |
[194] |
[97,175,NaN] |
8 |
hSpCas9 |
negative selection |
9832508 |
48466576 |
48466599 |
3 |
- |
27869803 |
PATU8988S |
viability after 31 days |
GCCCAGTGTTAAGATCCGAAGGG |
TREX1 |
ENSG00000213689 |
-0.014033176347233348 |
[507] |
[204,194,NaN] |
0 |
hSpCas9 |
negative selection |
9914953 |
48466577 |
48466600 |
3 |
- |
27869803 |
PATU8988S |
viability after 31 days |
TGCCCAGTGTTAAGATCCGAAGG |
TREX1 |
ENSG00000213689 |
0.6510799363463785 |
[541] |
[246,456,NaN] |
7 |
hSpCas9 |
negative selection |
9914954 |
48467050 |
48467073 |
3 |
- |
27869803 |
PATU8988S |
viability after 31 days |
AGCCAGCTCTGCTTGGAGCAGGG |
TREX1 |
ENSG00000213689 |
0.4739964812678513 |
[670] |
[291,472,NaN] |
6 |
hSpCas9 |
negative selection |
9914955 |
48467414 |
48467437 |
3 |
- |
27869803 |
PATU8988S |
viability after 31 days |
TAGTGTTCCTGGTTGTGGCCAGG |
TREX1 |
ENSG00000213689 |
-0.12673337353585223 |
[328] |
[91,155,NaN] |
-1 |
hSpCas9 |
negative selection |
9914956 |
48467539 |
48467562 |
3 |
- |
27869803 |
PATU8988S |
viability after 31 days |
GGCTACTGCCAAGGTCAGGATGG |
TREX1 |
ENSG00000213689 |
0.7290448192050303 |
[194] |
[138,115,NaN] |
8 |
hSpCas9 |
negative selection |
9914957 |
48466576 |
48466599 |
3 |
- |
27869803 |
HPAFII |
viability after 35 days |
GCCCAGTGTTAAGATCCGAAGGG |
TREX1 |
ENSG00000213689 |
-1.0953864614192403 |
[262] |
[98,20,NaN] |
-6 |
hSpCas9 |
negative selection |
9997402 |
48466577 |
48466600 |
3 |
- |
27869803 |
HPAFII |
viability after 35 days |
TGCCCAGTGTTAAGATCCGAAGG |
TREX1 |
ENSG00000213689 |
0.33432124638768757 |
[244] |
[201,104,NaN] |
2 |
hSpCas9 |
negative selection |
9997403 |
48467050 |
48467073 |
3 |
- |
27869803 |
HPAFII |
viability after 35 days |
AGCCAGCTCTGCTTGGAGCAGGG |
TREX1 |
ENSG00000213689 |
0.010662813293038698 |
[196] |
[99,100,NaN] |
0 |
hSpCas9 |
negative selection |
9997404 |
48467414 |
48467437 |
3 |
- |
27869803 |
HPAFII |
viability after 35 days |
TAGTGTTCCTGGTTGTGGCCAGG |
TREX1 |
ENSG00000213689 |
1.028440211222848 |
[118] |
[128,115,NaN] |
7 |
hSpCas9 |
negative selection |
9997405 |
48467539 |
48467562 |
3 |
- |
27869803 |
HPAFII |
viability after 35 days |
GGCTACTGCCAAGGTCAGGATGG |
TREX1 |
ENSG00000213689 |
0.10465962592801503 |
[98] |
[67,37,NaN] |
0 |
hSpCas9 |
negative selection |
9997406 |
48466576 |
48466599 |
3 |
- |
27869803 |
HPAFII |
viability after 31 days |
GCCCAGTGTTAAGATCCGAAGGG |
TREX1 |
ENSG00000213689 |
-0.35647784839686836 |
[262] |
[143,83,NaN] |
-2 |
hSpCas9 |
negative selection |
10079851 |
48466577 |
48466600 |
3 |
- |
27869803 |
HPAFII |
viability after 31 days |
TGCCCAGTGTTAAGATCCGAAGG |
TREX1 |
ENSG00000213689 |
-0.15373180631030062 |
[244] |
[136,108,NaN] |
-1 |
hSpCas9 |
negative selection |
10079852 |
48467050 |
48467073 |
3 |
- |
27869803 |
HPAFII |
viability after 31 days |
AGCCAGCTCTGCTTGGAGCAGGG |
TREX1 |
ENSG00000213689 |
0.4514973940575323 |
[196] |
[132,170,NaN] |
3 |
hSpCas9 |
negative selection |
10079853 |
48467414 |
48467437 |
3 |
- |
27869803 |
HPAFII |
viability after 31 days |
TAGTGTTCCTGGTTGTGGCCAGG |
TREX1 |
ENSG00000213689 |
1.3302573379627314 |
[118] |
[210,120,NaN] |
8 |
hSpCas9 |
negative selection |
10079854 |
48467539 |
48467562 |
3 |
- |
27869803 |
HPAFII |
viability after 31 days |
GGCTACTGCCAAGGTCAGGATGG |
TREX1 |
ENSG00000213689 |
0.41416405864745875 |
[98] |
[85,60,NaN] |
3 |
hSpCas9 |
negative selection |
10079855 |
48467523 |
48467546 |
3 |
- |
28162770 |
P31FUJ |
viability |
AGGATGGCCAGCAGACCCAGTGG |
TREX1 |
ENSG00000213689 |
0.3251932487065081 |
[107] |
[158] |
3 |
hSpCas9 |
negative selection |
10256483 |
48466766 |
48466789 |
3 |
+ |
28162770 |
P31FUJ |
viability |
GGCTGTCCACAGATGTGCCCTGG |
TREX1 |
ENSG00000213689 |
0.14658759379244113 |
[378] |
[492] |
1 |
hSpCas9 |
negative selection |
10256484 |
48466812 |
48466835 |
3 |
- |
28162770 |
P31FUJ |
viability |
GGTGGAGGAACTGTGGGAGGTGG |
TREX1 |
ENSG00000213689 |
-2.180334784520243 |
[296] |
[76] |
-8 |
hSpCas9 |
negative selection |
10256485 |
48466833 |
48466856 |
3 |
- |
28162770 |
P31FUJ |
viability |
AGCTTGTCTACCACACGCGGTGG |
TREX1 |
ENSG00000213689 |
0.19604109438949568 |
[77] |
[104] |
2 |
hSpCas9 |
negative selection |
10256486 |
48467388 |
48467411 |
3 |
- |
28162770 |
P31FUJ |
viability |
GCAGTGGTTGTGACAGCAGATGG |
TREX1 |
ENSG00000213689 |
0.23330252535424245 |
[450] |
[622] |
2 |
hSpCas9 |
negative selection |
10256487 |
48467086 |
48467109 |
3 |
- |
28162770 |
P31FUJ |
viability |
GAAGGCACCATCCAGAGCACTGG |
TREX1 |
ENSG00000213689 |
-0.21912726751730208 |
[209] |
[211] |
-2 |
hSpCas9 |
negative selection |
10256488 |
48467104 |
48467127 |
3 |
- |
28162770 |
P31FUJ |
viability |
AGTGATGCTATCCACACAGAAGG |
TREX1 |
ENSG00000213689 |
0.0864763120590345 |
[326] |
[407] |
0 |
hSpCas9 |
negative selection |
10256489 |
48467284 |
48467307 |
3 |
+ |
28162770 |
P31FUJ |
viability |
GGAGACCACAGGCCCTGCTGCGG |
TREX1 |
ENSG00000213689 |
-0.044099995941438166 |
[228] |
[260] |
0 |
hSpCas9 |
negative selection |
10256490 |
48467404 |
48467427 |
3 |
- |
28162770 |
P31FUJ |
viability |
GGTTGTGGCCAGGTGTGCAGTGG |
TREX1 |
ENSG00000213689 |
0.07721912378880968 |
[291] |
[361] |
0 |
hSpCas9 |
negative selection |
10256491 |
48466736 |
48466759 |
3 |
- |
28162770 |
P31FUJ |
viability |
ACAGCTCCGTGACCTTGGGCTGG |
TREX1 |
ENSG00000213689 |
-0.32636464540587373 |
[636] |
[596] |
-3 |
hSpCas9 |
negative selection |
10256492 |
48467523 |
48467546 |
3 |
- |
28162770 |
TF1 |
viability |
AGGATGGCCAGCAGACCCAGTGG |
TREX1 |
ENSG00000213689 |
NaN |
[NaN] |
[60] |
1 |
hSpCas9 |
negative selection |
10425849 |
48466766 |
48466789 |
3 |
+ |
28162770 |
TF1 |
viability |
GGCTGTCCACAGATGTGCCCTGG |
TREX1 |
ENSG00000213689 |
NaN |
[NaN] |
[259] |
1 |
hSpCas9 |
negative selection |
10425850 |
48466812 |
48466835 |
3 |
- |
28162770 |
TF1 |
viability |
GGTGGAGGAACTGTGGGAGGTGG |
TREX1 |
ENSG00000213689 |
NaN |
[NaN] |
[103] |
1 |
hSpCas9 |
negative selection |
10425851 |
48466833 |
48466856 |
3 |
- |
28162770 |
TF1 |
viability |
AGCTTGTCTACCACACGCGGTGG |
TREX1 |
ENSG00000213689 |
NaN |
[NaN] |
[59] |
1 |
hSpCas9 |
negative selection |
10425852 |
48467388 |
48467411 |
3 |
- |
28162770 |
TF1 |
viability |
GCAGTGGTTGTGACAGCAGATGG |
TREX1 |
ENSG00000213689 |
NaN |
[NaN] |
[316] |
1 |
hSpCas9 |
negative selection |
10425853 |
48467086 |
48467109 |
3 |
- |
28162770 |
TF1 |
viability |
GAAGGCACCATCCAGAGCACTGG |
TREX1 |
ENSG00000213689 |
NaN |
[NaN] |
[135] |
1 |
hSpCas9 |
negative selection |
10425854 |
48467104 |
48467127 |
3 |
- |
28162770 |
TF1 |
viability |
AGTGATGCTATCCACACAGAAGG |
TREX1 |
ENSG00000213689 |
NaN |
[NaN] |
[147] |
1 |
hSpCas9 |
negative selection |
10425855 |
48467284 |
48467307 |
3 |
+ |
28162770 |
TF1 |
viability |
GGAGACCACAGGCCCTGCTGCGG |
TREX1 |
ENSG00000213689 |
NaN |
[NaN] |
[85] |
1 |
hSpCas9 |
negative selection |
10425856 |
48467404 |
48467427 |
3 |
- |
28162770 |
TF1 |
viability |
GGTTGTGGCCAGGTGTGCAGTGG |
TREX1 |
ENSG00000213689 |
NaN |
[NaN] |
[167] |
1 |
hSpCas9 |
negative selection |
10425857 |
48466736 |
48466759 |
3 |
- |
28162770 |
TF1 |
viability |
ACAGCTCCGTGACCTTGGGCTGG |
TREX1 |
ENSG00000213689 |
NaN |
[NaN] |
[670] |
1 |
hSpCas9 |
negative selection |
10425858 |
48467523 |
48467546 |
3 |
- |
28162770 |
SKM1 |
viability |
AGGATGGCCAGCAGACCCAGTGG |
TREX1 |
ENSG00000213689 |
0.2999888263566051 |
[33] |
[73] |
3 |
hSpCas9 |
negative selection |
10595215 |
48466766 |
48466789 |
3 |
+ |
28162770 |
SKM1 |
viability |
GGCTGTCCACAGATGTGCCCTGG |
TREX1 |
ENSG00000213689 |
0.09827110950726015 |
[92] |
[175] |
0 |
hSpCas9 |
negative selection |
10595216 |
48466812 |
48466835 |
3 |
- |
28162770 |
SKM1 |
viability |
GGTGGAGGAACTGTGGGAGGTGG |
TREX1 |
ENSG00000213689 |
-2.030109893352206 |
[66] |
[28] |
-8 |
hSpCas9 |
negative selection |
10595217 |
48466833 |
48466856 |
3 |
- |
28162770 |
SKM1 |
viability |
AGCTTGTCTACCACACGCGGTGG |
TREX1 |
ENSG00000213689 |
-1.342833861323446 |
[32] |
[22] |
-7 |
hSpCas9 |
negative selection |
10595218 |
48467388 |
48467411 |
3 |
- |
28162770 |
SKM1 |
viability |
GCAGTGGTTGTGACAGCAGATGG |
TREX1 |
ENSG00000213689 |
0.16151017918942534 |
[131] |
[260] |
1 |
hSpCas9 |
negative selection |
10595219 |
48467086 |
48467109 |
3 |
- |
28162770 |
SKM1 |
viability |
GAAGGCACCATCCAGAGCACTGG |
TREX1 |
ENSG00000213689 |
0.09184165822827989 |
[68] |
[129] |
0 |
hSpCas9 |
negative selection |
10595220 |
48467104 |
48467127 |
3 |
- |
28162770 |
SKM1 |
viability |
AGTGATGCTATCCACACAGAAGG |
TREX1 |
ENSG00000213689 |
0.5381738662223201 |
[66] |
[171] |
5 |
hSpCas9 |
negative selection |
10595221 |
48467284 |
48467307 |
3 |
+ |
28162770 |
SKM1 |
viability |
GGAGACCACAGGCCCTGCTGCGG |
TREX1 |
ENSG00000213689 |
-0.5875364443849825 |
[50] |
[59] |
-5 |
hSpCas9 |
negative selection |
10595222 |
48467404 |
48467427 |
3 |
- |
28162770 |
SKM1 |
viability |
GGTTGTGGCCAGGTGTGCAGTGG |
TREX1 |
ENSG00000213689 |
0.22724182099784346 |
[71] |
[148] |
2 |
hSpCas9 |
negative selection |
10595223 |
48466736 |
48466759 |
3 |
- |
28162770 |
SKM1 |
viability |
ACAGCTCCGTGACCTTGGGCTGG |
TREX1 |
ENSG00000213689 |
-0.3573334310185612 |
[149] |
[206] |
-3 |
hSpCas9 |
negative selection |
10595224 |
48467523 |
48467546 |
3 |
- |
28162770 |
SKM1 |
viability |
AGGATGGCCAGCAGACCCAGTGG |
TREX1 |
ENSG00000213689 |
0.2999888263566051 |
[33] |
[73] |
3 |
hSpCas9 |
negative selection |
10764581 |
48466766 |
48466789 |
3 |
+ |
28162770 |
SKM1 |
viability |
GGCTGTCCACAGATGTGCCCTGG |
TREX1 |
ENSG00000213689 |
0.09827110950726015 |
[92] |
[175] |
0 |
hSpCas9 |
negative selection |
10764582 |
48466812 |
48466835 |
3 |
- |
28162770 |
SKM1 |
viability |
GGTGGAGGAACTGTGGGAGGTGG |
TREX1 |
ENSG00000213689 |
-2.030109893352206 |
[66] |
[28] |
-8 |
hSpCas9 |
negative selection |
10764583 |
48466833 |
48466856 |
3 |
- |
28162770 |
SKM1 |
viability |
AGCTTGTCTACCACACGCGGTGG |
TREX1 |
ENSG00000213689 |
-1.342833861323446 |
[32] |
[22] |
-7 |
hSpCas9 |
negative selection |
10764584 |
48467388 |
48467411 |
3 |
- |
28162770 |
SKM1 |
viability |
GCAGTGGTTGTGACAGCAGATGG |
TREX1 |
ENSG00000213689 |
0.16151017918942534 |
[131] |
[260] |
1 |
hSpCas9 |
negative selection |
10764585 |
48467086 |
48467109 |
3 |
- |
28162770 |
SKM1 |
viability |
GAAGGCACCATCCAGAGCACTGG |
TREX1 |
ENSG00000213689 |
0.09184165822827989 |
[68] |
[129] |
0 |
hSpCas9 |
negative selection |
10764586 |
48467104 |
48467127 |
3 |
- |
28162770 |
SKM1 |
viability |
AGTGATGCTATCCACACAGAAGG |
TREX1 |
ENSG00000213689 |
0.5381738662223201 |
[66] |
[171] |
5 |
hSpCas9 |
negative selection |
10764587 |
48467284 |
48467307 |
3 |
+ |
28162770 |
SKM1 |
viability |
GGAGACCACAGGCCCTGCTGCGG |
TREX1 |
ENSG00000213689 |
-0.5875364443849825 |
[50] |
[59] |
-5 |
hSpCas9 |
negative selection |
10764588 |
48467404 |
48467427 |
3 |
- |
28162770 |
SKM1 |
viability |
GGTTGTGGCCAGGTGTGCAGTGG |
TREX1 |
ENSG00000213689 |
0.22724182099784346 |
[71] |
[148] |
2 |
hSpCas9 |
negative selection |
10764589 |
48466736 |
48466759 |
3 |
- |
28162770 |
SKM1 |
viability |
ACAGCTCCGTGACCTTGGGCTGG |
TREX1 |
ENSG00000213689 |
-0.3573334310185612 |
[149] |
[206] |
-3 |
hSpCas9 |
negative selection |
10764590 |
48467523 |
48467546 |
3 |
- |
28162770 |
PL21 |
viability |
AGGATGGCCAGCAGACCCAGTGG |
TREX1 |
ENSG00000213689 |
-0.384822886231836 |
[113] |
[37] |
-3 |
hSpCas9 |
negative selection |
10933947 |
48466766 |
48466789 |
3 |
+ |
28162770 |
PL21 |
viability |
GGCTGTCCACAGATGTGCCCTGG |
TREX1 |
ENSG00000213689 |
-0.06183046444936369 |
[270] |
[112] |
0 |
hSpCas9 |
negative selection |
10933948 |
48466812 |
48466835 |
3 |
- |
28162770 |
PL21 |
viability |
GGTGGAGGAACTGTGGGAGGTGG |
TREX1 |
ENSG00000213689 |
-0.4639930996654437 |
[205] |
[64] |
-3 |
hSpCas9 |
negative selection |
10933949 |
48466833 |
48466856 |
3 |
- |
28162770 |
PL21 |
viability |
AGCTTGTCTACCACACGCGGTGG |
TREX1 |
ENSG00000213689 |
-0.5822689504380532 |
[85] |
[24] |
-4 |
hSpCas9 |
negative selection |
10933950 |
48467388 |
48467411 |
3 |
- |
28162770 |
PL21 |
viability |
GCAGTGGTTGTGACAGCAGATGG |
TREX1 |
ENSG00000213689 |
0.38901490967299246 |
[478] |
[272] |
3 |
hSpCas9 |
negative selection |
10933951 |
48467086 |
48467109 |
3 |
- |
28162770 |
PL21 |
viability |
GAAGGCACCATCCAGAGCACTGG |
TREX1 |
ENSG00000213689 |
-0.26414140380937273 |
[297] |
[107] |
-2 |
hSpCas9 |
negative selection |
10933952 |
48467104 |
48467127 |
3 |
- |
28162770 |
PL21 |
viability |
AGTGATGCTATCCACACAGAAGG |
TREX1 |
ENSG00000213689 |
-0.9881639162678466 |
[236] |
[51] |
-6 |
hSpCas9 |
negative selection |
10933953 |
48467284 |
48467307 |
3 |
+ |
28162770 |
PL21 |
viability |
GGAGACCACAGGCCCTGCTGCGG |
TREX1 |
ENSG00000213689 |
-0.8126844258682635 |
[225] |
[55] |
-5 |
hSpCas9 |
negative selection |
10933954 |
48467404 |
48467427 |
3 |
- |
28162770 |
PL21 |
viability |
GGTTGTGGCCAGGTGTGCAGTGG |
TREX1 |
ENSG00000213689 |
-1.378128233657828 |
[214] |
[35] |
-7 |
hSpCas9 |
negative selection |
10933955 |
48466736 |
48466759 |
3 |
- |
28162770 |
PL21 |
viability |
ACAGCTCCGTGACCTTGGGCTGG |
TREX1 |
ENSG00000213689 |
0.49370281812332073 |
[451] |
[276] |
4 |
hSpCas9 |
negative selection |
10933956 |
48467523 |
48467546 |
3 |
- |
28162770 |
P31FUJ |
viability |
AGGATGGCCAGCAGACCCAGTGG |
TREX1 |
ENSG00000213689 |
0.3251932487065081 |
[107] |
[158] |
3 |
hSpCas9 |
negative selection |
11103313 |
48466766 |
48466789 |
3 |
+ |
28162770 |
P31FUJ |
viability |
GGCTGTCCACAGATGTGCCCTGG |
TREX1 |
ENSG00000213689 |
0.14658759379244113 |
[378] |
[492] |
1 |
hSpCas9 |
negative selection |
11103314 |
48466812 |
48466835 |
3 |
- |
28162770 |
P31FUJ |
viability |
GGTGGAGGAACTGTGGGAGGTGG |
TREX1 |
ENSG00000213689 |
-2.180334784520243 |
[296] |
[76] |
-8 |
hSpCas9 |
negative selection |
11103315 |
48466833 |
48466856 |
3 |
- |
28162770 |
P31FUJ |
viability |
AGCTTGTCTACCACACGCGGTGG |
TREX1 |
ENSG00000213689 |
0.19604109438949568 |
[77] |
[104] |
2 |
hSpCas9 |
negative selection |
11103316 |
48467388 |
48467411 |
3 |
- |
28162770 |
P31FUJ |
viability |
GCAGTGGTTGTGACAGCAGATGG |
TREX1 |
ENSG00000213689 |
0.23330252535424245 |
[450] |
[622] |
2 |
hSpCas9 |
negative selection |
11103317 |
48467086 |
48467109 |
3 |
- |
28162770 |
P31FUJ |
viability |
GAAGGCACCATCCAGAGCACTGG |
TREX1 |
ENSG00000213689 |
-0.21912726751730208 |
[209] |
[211] |
-2 |
hSpCas9 |
negative selection |
11103318 |
48467104 |
48467127 |
3 |
- |
28162770 |
P31FUJ |
viability |
AGTGATGCTATCCACACAGAAGG |
TREX1 |
ENSG00000213689 |
0.0864763120590345 |
[326] |
[407] |
0 |
hSpCas9 |
negative selection |
11103319 |
48467284 |
48467307 |
3 |
+ |
28162770 |
P31FUJ |
viability |
GGAGACCACAGGCCCTGCTGCGG |
TREX1 |
ENSG00000213689 |
-0.044099995941438166 |
[228] |
[260] |
0 |
hSpCas9 |
negative selection |
11103320 |
48467404 |
48467427 |
3 |
- |
28162770 |
P31FUJ |
viability |
GGTTGTGGCCAGGTGTGCAGTGG |
TREX1 |
ENSG00000213689 |
0.07721912378880968 |
[291] |
[361] |
0 |
hSpCas9 |
negative selection |
11103321 |
48466736 |
48466759 |
3 |
- |
28162770 |
P31FUJ |
viability |
ACAGCTCCGTGACCTTGGGCTGG |
TREX1 |
ENSG00000213689 |
-0.32636464540587373 |
[636] |
[596] |
-3 |
hSpCas9 |
negative selection |
11103322 |
48467523 |
48467546 |
3 |
- |
28162770 |
OCIAML5 |
viability |
AGGATGGCCAGCAGACCCAGTGG |
TREX1 |
ENSG00000213689 |
0.8108984418584324 |
[53] |
[170] |
7 |
hSpCas9 |
negative selection |
11272679 |
48466766 |
48466789 |
3 |
+ |
28162770 |
OCIAML5 |
viability |
GGCTGTCCACAGATGTGCCCTGG |
TREX1 |
ENSG00000213689 |
1.0651448304222417 |
[129] |
[490] |
8 |
hSpCas9 |
negative selection |
11272680 |
48466812 |
48466835 |
3 |
- |
28162770 |
OCIAML5 |
viability |
GGTGGAGGAACTGTGGGAGGTGG |
TREX1 |
ENSG00000213689 |
-1.822319227469945 |
[95] |
[48] |
-7 |
hSpCas9 |
negative selection |
11272681 |
48466833 |
48466856 |
3 |
- |
28162770 |
OCIAML5 |
viability |
AGCTTGTCTACCACACGCGGTGG |
TREX1 |
ENSG00000213689 |
-0.4597491480852367 |
[79] |
[104] |
-3 |
hSpCas9 |
negative selection |
11272682 |
48467388 |
48467411 |
3 |
- |
28162770 |
OCIAML5 |
viability |
GCAGTGGTTGTGACAGCAGATGG |
TREX1 |
ENSG00000213689 |
0.28270198516469924 |
[239] |
[526] |
2 |
hSpCas9 |
negative selection |
11272683 |
48467086 |
48467109 |
3 |
- |
28162770 |
OCIAML5 |
viability |
GAAGGCACCATCCAGAGCACTGG |
TREX1 |
ENSG00000213689 |
-1.4150027652551542 |
[129] |
[87] |
-7 |
hSpCas9 |
negative selection |
11272684 |
48467104 |
48467127 |
3 |
- |
28162770 |
OCIAML5 |
viability |
AGTGATGCTATCCACACAGAAGG |
TREX1 |
ENSG00000213689 |
0.041018225219490945 |
[223] |
[415] |
0 |
hSpCas9 |
negative selection |
11272685 |
48467284 |
48467307 |
3 |
+ |
28162770 |
OCIAML5 |
viability |
GGAGACCACAGGCCCTGCTGCGG |
TREX1 |
ENSG00000213689 |
-0.35403970691412157 |
[113] |
[160] |
-3 |
hSpCas9 |
negative selection |
11272686 |
48467404 |
48467427 |
3 |
- |
28162770 |
OCIAML5 |
viability |
GGTTGTGGCCAGGTGTGCAGTGG |
TREX1 |
ENSG00000213689 |
-0.5890321650302032 |
[144] |
[173] |
-4 |
hSpCas9 |
negative selection |
11272687 |
48466736 |
48466759 |
3 |
- |
28162770 |
OCIAML5 |
viability |
ACAGCTCCGTGACCTTGGGCTGG |
TREX1 |
ENSG00000213689 |
-0.9672363412841782 |
[390] |
[360] |
-6 |
hSpCas9 |
negative selection |
11272688 |
48467523 |
48467546 |
3 |
- |
28162770 |
EOL1 |
viability |
AGGATGGCCAGCAGACCCAGTGG |
TREX1 |
ENSG00000213689 |
-0.20392678637827466 |
[222] |
[101] |
-1 |
hSpCas9 |
negative selection |
11442045 |
48466766 |
48466789 |
3 |
+ |
28162770 |
EOL1 |
viability |
GGCTGTCCACAGATGTGCCCTGG |
TREX1 |
ENSG00000213689 |
-0.8258043762105818 |
[396] |
[117] |
-5 |
hSpCas9 |
negative selection |
11442046 |
48466812 |
48466835 |
3 |
- |
28162770 |
EOL1 |
viability |
GGTGGAGGAACTGTGGGAGGTGG |
TREX1 |
ENSG00000213689 |
0.4662841694921569 |
[462] |
[336] |
4 |
hSpCas9 |
negative selection |
11442047 |
48466833 |
48466856 |
3 |
- |
28162770 |
EOL1 |
viability |
AGCTTGTCTACCACACGCGGTGG |
TREX1 |
ENSG00000213689 |
-2.5779525689586484 |
[203] |
[17] |
-9 |
hSpCas9 |
negative selection |
11442048 |
48467388 |
48467411 |
3 |
- |
28162770 |
EOL1 |
viability |
GCAGTGGTTGTGACAGCAGATGG |
TREX1 |
ENSG00000213689 |
0.3975492521787032 |
[682] |
[473] |
3 |
hSpCas9 |
negative selection |
11442049 |
48467086 |
48467109 |
3 |
- |
28162770 |
EOL1 |
viability |
GAAGGCACCATCCAGAGCACTGG |
TREX1 |
ENSG00000213689 |
-0.509653732244534 |
[580] |
[214] |
-4 |
hSpCas9 |
negative selection |
11442050 |
48467104 |
48467127 |
3 |
- |
28162770 |
EOL1 |
viability |
AGTGATGCTATCCACACAGAAGG |
TREX1 |
ENSG00000213689 |
-0.4677696512082256 |
[314] |
[119] |
-3 |
hSpCas9 |
negative selection |
11442051 |
48467284 |
48467307 |
3 |
+ |
28162770 |
EOL1 |
viability |
GGAGACCACAGGCCCTGCTGCGG |
TREX1 |
ENSG00000213689 |
-1.67061049625651 |
[283] |
[46] |
-8 |
hSpCas9 |
negative selection |
11442052 |
48467404 |
48467427 |
3 |
- |
28162770 |
EOL1 |
viability |
GGTTGTGGCCAGGTGTGCAGTGG |
TREX1 |
ENSG00000213689 |
-0.814220065229657 |
[266] |
[79] |
-5 |
hSpCas9 |
negative selection |
11442053 |
48466736 |
48466759 |
3 |
- |
28162770 |
EOL1 |
viability |
ACAGCTCCGTGACCTTGGGCTGG |
TREX1 |
ENSG00000213689 |
-0.37196790414381353 |
[618] |
[251] |
-3 |
hSpCas9 |
negative selection |
11442054 |
48467523 |
48467546 |
3 |
- |
28162770 |
MOLM13 |
viability |
AGGATGGCCAGCAGACCCAGTGG |
TREX1 |
ENSG00000213689 |
-0.035279028012930036 |
[179] |
[126] |
0 |
hSpCas9 |
negative selection |
11611411 |
48466766 |
48466789 |
3 |
+ |
28162770 |
MOLM13 |
viability |
GGCTGTCCACAGATGTGCCCTGG |
TREX1 |
ENSG00000213689 |
-1.065358082632422 |
[410] |
[141] |
-5 |
hSpCas9 |
negative selection |
11611412 |
48466812 |
48466835 |
3 |
- |
28162770 |
MOLM13 |
viability |
GGTGGAGGAACTGTGGGAGGTGG |
TREX1 |
ENSG00000213689 |
-2.738962188896091 |
[276] |
[29] |
-8 |
hSpCas9 |
negative selection |
11611413 |
48466833 |
48466856 |
3 |
- |
28162770 |
MOLM13 |
viability |
AGCTTGTCTACCACACGCGGTGG |
TREX1 |
ENSG00000213689 |
1.1410790652774703 |
[147] |
[235] |
8 |
hSpCas9 |
negative selection |
11611414 |
48467388 |
48467411 |
3 |
- |
28162770 |
MOLM13 |
viability |
GCAGTGGTTGTGACAGCAGATGG |
TREX1 |
ENSG00000213689 |
1.3443470525541739 |
[724] |
[1330] |
8 |
hSpCas9 |
negative selection |
11611415 |
48467086 |
48467109 |
3 |
- |
28162770 |
MOLM13 |
viability |
GAAGGCACCATCCAGAGCACTGG |
TREX1 |
ENSG00000213689 |
-0.13909942550657617 |
[395] |
[259] |
-1 |
hSpCas9 |
negative selection |
11611416 |
48467104 |
48467127 |
3 |
- |
28162770 |
MOLM13 |
viability |
AGTGATGCTATCCACACAGAAGG |
TREX1 |
ENSG00000213689 |
0.06290554692965789 |
[428] |
[323] |
0 |
hSpCas9 |
negative selection |
11611417 |
48467284 |
48467307 |
3 |
+ |
28162770 |
MOLM13 |
viability |
GGAGACCACAGGCCCTGCTGCGG |
TREX1 |
ENSG00000213689 |
-3.0764311346792312 |
[244] |
[20] |
-8 |
hSpCas9 |
negative selection |
11611418 |
48467404 |
48467427 |
3 |
- |
28162770 |
MOLM13 |
viability |
GGTTGTGGCCAGGTGTGCAGTGG |
TREX1 |
ENSG00000213689 |
0.058245141035953456 |
[266] |
[200] |
0 |
hSpCas9 |
negative selection |
11611419 |
48466736 |
48466759 |
3 |
- |
28162770 |
MOLM13 |
viability |
ACAGCTCCGTGACCTTGGGCTGG |
TREX1 |
ENSG00000213689 |
-1.0716301484154103 |
[624] |
[214] |
-5 |
hSpCas9 |
negative selection |
11611420 |
48467523 |
48467546 |
3 |
- |
28162770 |
HEL |
viability |
AGGATGGCCAGCAGACCCAGTGG |
TREX1 |
ENSG00000213689 |
-0.9625436531003951 |
[142] |
[46] |
-5 |
hSpCas9 |
negative selection |
11780777 |
48466766 |
48466789 |
3 |
+ |
28162770 |
HEL |
viability |
GGCTGTCCACAGATGTGCCCTGG |
TREX1 |
ENSG00000213689 |
-0.77872493643792 |
[374] |
[139] |
-5 |
hSpCas9 |
negative selection |
11780778 |
48466812 |
48466835 |
3 |
- |
28162770 |
HEL |
viability |
GGTGGAGGAACTGTGGGAGGTGG |
TREX1 |
ENSG00000213689 |
-1.2249009475256678 |
[280] |
[76] |
-6 |
hSpCas9 |
negative selection |
11780779 |
48466833 |
48466856 |
3 |
- |
28162770 |
HEL |
viability |
AGCTTGTCTACCACACGCGGTGG |
TREX1 |
ENSG00000213689 |
0.07526375800804208 |
[122] |
[82] |
0 |
hSpCas9 |
negative selection |
11780780 |
48467388 |
48467411 |
3 |
- |
28162770 |
HEL |
viability |
GCAGTGGTTGTGACAGCAGATGG |
TREX1 |
ENSG00000213689 |
0.5707752364804244 |
[595] |
[566] |
5 |
hSpCas9 |
negative selection |
11780781 |
48467086 |
48467109 |
3 |
- |
28162770 |
HEL |
viability |
GAAGGCACCATCCAGAGCACTGG |
TREX1 |
ENSG00000213689 |
0.15120319524746972 |
[425] |
[302] |
1 |
hSpCas9 |
negative selection |
11780782 |
48467104 |
48467127 |
3 |
- |
28162770 |
HEL |
viability |
AGTGATGCTATCCACACAGAAGG |
TREX1 |
ENSG00000213689 |
0.28140235255475926 |
[333] |
[259] |
2 |
hSpCas9 |
negative selection |
11780783 |
48467284 |
48467307 |
3 |
+ |
28162770 |
HEL |
viability |
GGAGACCACAGGCCCTGCTGCGG |
TREX1 |
ENSG00000213689 |
-0.954660771959022 |
[232] |
[76] |
-5 |
hSpCas9 |
negative selection |
11780784 |
48467404 |
48467427 |
3 |
- |
28162770 |
HEL |
viability |
GGTTGTGGCCAGGTGTGCAGTGG |
TREX1 |
ENSG00000213689 |
0.2504214092215966 |
[251] |
[191] |
2 |
hSpCas9 |
negative selection |
11780785 |
48466736 |
48466759 |
3 |
- |
28162770 |
HEL |
viability |
ACAGCTCCGTGACCTTGGGCTGG |
TREX1 |
ENSG00000213689 |
0.28298376822270255 |
[511] |
[398] |
2 |
hSpCas9 |
negative selection |
11780786 |
48467523 |
48467546 |
3 |
- |
28162770 |
MV411 |
viability |
AGGATGGCCAGCAGACCCAGTGG |
TREX1 |
ENSG00000213689 |
-0.039085207973388325 |
[160] |
[131] |
0 |
hSpCas9 |
negative selection |
11950143 |
48466766 |
48466789 |
3 |
+ |
28162770 |
MV411 |
viability |
GGCTGTCCACAGATGTGCCCTGG |
TREX1 |
ENSG00000213689 |
0.07055978869869606 |
[285] |
[252] |
0 |
hSpCas9 |
negative selection |
11950144 |
48466812 |
48466835 |
3 |
- |
28162770 |
MV411 |
viability |
GGTGGAGGAACTGTGGGAGGTGG |
TREX1 |
ENSG00000213689 |
-1.3598927629668354 |
[194] |
[63] |
-7 |
hSpCas9 |
negative selection |
11950145 |
48466833 |
48466856 |
3 |
- |
28162770 |
MV411 |
viability |
AGCTTGTCTACCACACGCGGTGG |
TREX1 |
ENSG00000213689 |
0.012972297145752432 |
[79] |
[67] |
0 |
hSpCas9 |
negative selection |
11950146 |
48467388 |
48467411 |
3 |
- |
28162770 |
MV411 |
viability |
GCAGTGGTTGTGACAGCAGATGG |
TREX1 |
ENSG00000213689 |
0.22096533942158425 |
[439] |
[431] |
2 |
hSpCas9 |
negative selection |
11950147 |
48467086 |
48467109 |
3 |
- |
28162770 |
MV411 |
viability |
GAAGGCACCATCCAGAGCACTGG |
TREX1 |
ENSG00000213689 |
-0.26521074512249077 |
[320] |
[224] |
-2 |
hSpCas9 |
negative selection |
11950148 |
48467104 |
48467127 |
3 |
- |
28162770 |
MV411 |
viability |
AGTGATGCTATCCACACAGAAGG |
TREX1 |
ENSG00000213689 |
0.5487061751040446 |
[210] |
[259] |
5 |
hSpCas9 |
negative selection |
11950149 |
48467284 |
48467307 |
3 |
+ |
28162770 |
MV411 |
viability |
GGAGACCACAGGCCCTGCTGCGG |
TREX1 |
ENSG00000213689 |
-0.7439493189125166 |
[166] |
[83] |
-5 |
hSpCas9 |
negative selection |
11950150 |
48467404 |
48467427 |
3 |
- |
28162770 |
MV411 |
viability |
GGTTGTGGCCAGGTGTGCAGTGG |
TREX1 |
ENSG00000213689 |
-0.07610159401057254 |
[223] |
[178] |
0 |
hSpCas9 |
negative selection |
11950151 |
48466736 |
48466759 |
3 |
- |
28162770 |
MV411 |
viability |
ACAGCTCCGTGACCTTGGGCTGG |
TREX1 |
ENSG00000213689 |
-0.17227643570554185 |
[411] |
[307] |
-1 |
hSpCas9 |
negative selection |
11950152 |
48467523 |
48467546 |
3 |
- |
28162770 |
MONOMAC1 |
viability |
AGGATGGCCAGCAGACCCAGTGG |
TREX1 |
ENSG00000213689 |
-0.2313883518503308 |
[84] |
[82] |
-2 |
hSpCas9 |
negative selection |
12119509 |
48466766 |
48466789 |
3 |
+ |
28162770 |
MONOMAC1 |
viability |
GGCTGTCCACAGATGTGCCCTGG |
TREX1 |
ENSG00000213689 |
-0.06579231378130107 |
[167] |
[183] |
0 |
hSpCas9 |
negative selection |
12119510 |
48466812 |
48466835 |
3 |
- |
28162770 |
MONOMAC1 |
viability |
GGTGGAGGAACTGTGGGAGGTGG |
TREX1 |
ENSG00000213689 |
-0.4653269783448429 |
[164] |
[136] |
-4 |
hSpCas9 |
negative selection |
12119511 |
48466833 |
48466856 |
3 |
- |
28162770 |
MONOMAC1 |
viability |
AGCTTGTCTACCACACGCGGTGG |
TREX1 |
ENSG00000213689 |
-0.07365443155427132 |
[55] |
[60] |
0 |
hSpCas9 |
negative selection |
12119512 |
48467388 |
48467411 |
3 |
- |
28162770 |
MONOMAC1 |
viability |
GCAGTGGTTGTGACAGCAGATGG |
TREX1 |
ENSG00000213689 |
0.6977809162483897 |
[255] |
[475] |
6 |
hSpCas9 |
negative selection |
12119513 |
48467086 |
48467109 |
3 |
- |
28162770 |
MONOMAC1 |
viability |
GAAGGCACCATCCAGAGCACTGG |
TREX1 |
ENSG00000213689 |
0.5279561054405766 |
[120] |
[199] |
5 |
hSpCas9 |
negative selection |
12119514 |
48467104 |
48467127 |
3 |
- |
28162770 |
MONOMAC1 |
viability |
AGTGATGCTATCCACACAGAAGG |
TREX1 |
ENSG00000213689 |
0.5399287471066524 |
[179] |
[299] |
5 |
hSpCas9 |
negative selection |
12119515 |
48467284 |
48467307 |
3 |
+ |
28162770 |
MONOMAC1 |
viability |
GGAGACCACAGGCCCTGCTGCGG |
TREX1 |
ENSG00000213689 |
-0.017713147614991653 |
[203] |
[230] |
0 |
hSpCas9 |
negative selection |
12119516 |
48467404 |
48467427 |
3 |
- |
28162770 |
MONOMAC1 |
viability |
GGTTGTGGCCAGGTGTGCAGTGG |
TREX1 |
ENSG00000213689 |
0.40530773188983904 |
[109] |
[166] |
4 |
hSpCas9 |
negative selection |
12119517 |
48466736 |
48466759 |
3 |
- |
28162770 |
MONOMAC1 |
viability |
ACAGCTCCGTGACCTTGGGCTGG |
TREX1 |
ENSG00000213689 |
-0.15894367588747893 |
[298] |
[306] |
-1 |
hSpCas9 |
negative selection |
12119518 |
48467523 |
48467546 |
3 |
- |
28162770 |
OCIAML2 |
viability |
AGGATGGCCAGCAGACCCAGTGG |
TREX1 |
ENSG00000213689 |
-0.3153515997642502 |
[21] |
[97] |
-3 |
hSpCas9 |
negative selection |
12288875 |
48466766 |
48466789 |
3 |
+ |
28162770 |
OCIAML2 |
viability |
GGCTGTCCACAGATGTGCCCTGG |
TREX1 |
ENSG00000213689 |
0.0900851292323176 |
[49] |
[294] |
0 |
hSpCas9 |
negative selection |
12288876 |
48466812 |
48466835 |
3 |
- |
28162770 |
OCIAML2 |
viability |
GGTGGAGGAACTGTGGGAGGTGG |
TREX1 |
ENSG00000213689 |
-1.4706298252421612 |
[36] |
[73] |
-7 |
hSpCas9 |
negative selection |
12288877 |
48466833 |
48466856 |
3 |
- |
28162770 |
OCIAML2 |
viability |
AGCTTGTCTACCACACGCGGTGG |
TREX1 |
ENSG00000213689 |
-0.2742326124386578 |
[11] |
[54] |
-2 |
hSpCas9 |
negative selection |
12288878 |
48467388 |
48467411 |
3 |
- |
28162770 |
OCIAML2 |
viability |
GCAGTGGTTGTGACAGCAGATGG |
TREX1 |
ENSG00000213689 |
0.28651365086167546 |
[70] |
[479] |
2 |
hSpCas9 |
negative selection |
12288879 |
48467086 |
48467109 |
3 |
- |
28162770 |
OCIAML2 |
viability |
GAAGGCACCATCCAGAGCACTGG |
TREX1 |
ENSG00000213689 |
-0.46357506770821066 |
[50] |
[204] |
-4 |
hSpCas9 |
negative selection |
12288880 |
48467104 |
48467127 |
3 |
- |
28162770 |
OCIAML2 |
viability |
AGTGATGCTATCCACACAGAAGG |
TREX1 |
ENSG00000213689 |
-0.8223413891521758 |
[51] |
[162] |
-5 |
hSpCas9 |
negative selection |
12288881 |
48467284 |
48467307 |
3 |
+ |
28162770 |
OCIAML2 |
viability |
GGAGACCACAGGCCCTGCTGCGG |
TREX1 |
ENSG00000213689 |
-1.0895396578866552 |
[42] |
[111] |
-6 |
hSpCas9 |
negative selection |
12288882 |
48467404 |
48467427 |
3 |
- |
28162770 |
OCIAML2 |
viability |
GGTTGTGGCCAGGTGTGCAGTGG |
TREX1 |
ENSG00000213689 |
-0.18905946797093992 |
[28] |
[140] |
-1 |
hSpCas9 |
negative selection |
12288883 |
48466736 |
48466759 |
3 |
- |
28162770 |
OCIAML2 |
viability |
ACAGCTCCGTGACCTTGGGCTGG |
TREX1 |
ENSG00000213689 |
-0.6096062383909717 |
[97] |
[355] |
-4 |
hSpCas9 |
negative selection |
12288884 |
48467523 |
48467546 |
3 |
- |
28162770 |
OCIAML3 |
viability |
AGGATGGCCAGCAGACCCAGTGG |
TREX1 |
ENSG00000213689 |
-0.08210860179273027 |
[26] |
[76] |
0 |
hSpCas9 |
negative selection |
12458241 |
48466766 |
48466789 |
3 |
+ |
28162770 |
OCIAML3 |
viability |
GGCTGTCCACAGATGTGCCCTGG |
TREX1 |
ENSG00000213689 |
-0.3685875262901471 |
[67] |
[158] |
-3 |
hSpCas9 |
negative selection |
12458242 |
48466812 |
48466835 |
3 |
- |
28162770 |
OCIAML3 |
viability |
GGTGGAGGAACTGTGGGAGGTGG |
TREX1 |
ENSG00000213689 |
-0.786652718266559 |
[59] |
[104] |
-5 |
hSpCas9 |
negative selection |
12458243 |
48466833 |
48466856 |
3 |
- |
28162770 |
OCIAML3 |
viability |
AGCTTGTCTACCACACGCGGTGG |
TREX1 |
ENSG00000213689 |
-0.009045139603007124 |
[20] |
[62] |
0 |
hSpCas9 |
negative selection |
12458244 |
48467388 |
48467411 |
3 |
- |
28162770 |
OCIAML3 |
viability |
GCAGTGGTTGTGACAGCAGATGG |
TREX1 |
ENSG00000213689 |
0.1756465725482177 |
[143] |
[490] |
1 |
hSpCas9 |
negative selection |
12458245 |
48467086 |
48467109 |
3 |
- |
28162770 |
OCIAML3 |
viability |
GAAGGCACCATCCAGAGCACTGG |
TREX1 |
ENSG00000213689 |
-0.0714416767408741 |
[62] |
[180] |
0 |
hSpCas9 |
negative selection |
12458246 |
48467104 |
48467127 |
3 |
- |
28162770 |
OCIAML3 |
viability |
AGTGATGCTATCCACACAGAAGG |
TREX1 |
ENSG00000213689 |
-0.4785304229042273 |
[83] |
[181] |
-4 |
hSpCas9 |
negative selection |
12458247 |
48467284 |
48467307 |
3 |
+ |
28162770 |
OCIAML3 |
viability |
GGAGACCACAGGCCCTGCTGCGG |
TREX1 |
ENSG00000213689 |
-0.5334660983891124 |
[69] |
[145] |
-4 |
hSpCas9 |
negative selection |
12458248 |
48467404 |
48467427 |
3 |
- |
28162770 |
OCIAML3 |
viability |
GGTTGTGGCCAGGTGTGCAGTGG |
TREX1 |
ENSG00000213689 |
0.21906093292783474 |
[71] |
[252] |
2 |
hSpCas9 |
negative selection |
12458249 |
48466736 |
48466759 |
3 |
- |
28162770 |
OCIAML3 |
viability |
ACAGCTCCGTGACCTTGGGCTGG |
TREX1 |
ENSG00000213689 |
-0.03601218720327637 |
[125] |
[370] |
0 |
hSpCas9 |
negative selection |
12458250 |