| GR00002-A |
41942 |
FBgn0002783 |
mor |
DRSC15378 |
1.531556191 |
none |
|
no |
|
Lipid storage |
COPI complex is a regulator of lipid homeostasis. |
Beller et al. |
2008 |
19067489 |
Cell line |
Kc167 |
Nuclear to lipid droplet cross-sectional area |
Fluorescence |
np |
Genome-wide |
dsRNA |
B-score |
> 2 OR < -1.7 |
Additional information about a secondary screen with non-overlaping dsRNAs |
GR00002-A |
41942 |
FBgn0002783 |
mor |
DRSC15378 |
1.861209501 |
none |
|
no |
|
Lipid storage |
COPI complex is a regulator of lipid homeostasis. |
Beller et al. |
2008 |
19067489 |
Cell line |
Kc167 |
Nuclear to lipid droplet cross-sectional area |
Fluorescence |
np |
Genome-wide |
dsRNA |
B-score |
> 2 OR < -1.7 |
Additional information about a secondary screen with non-overlaping dsRNAs |
GR00031-A-1 |
41942 |
|
|
HFA15378 |
0.5 |
none |
|
yes |
|
Cell growth and viability (1) |
Genome-wide RNAi analysis of growth and viability in Drosophila cells. |
Boutros et al. |
2004 |
14764878 |
Cell line |
Kc167 |
Cell number and viability |
Luminescence |
Custom-made (HFA) |
Genome-wide |
dsRNA |
Z-score |
> |
|
GR00031-A-2 |
41942 |
|
|
HFA15378 |
0.2 |
none |
|
no |
|
Cell growth and viability (2) |
Genome-wide RNAi analysis of growth and viability in Drosophila cells. |
Boutros et al. |
2004 |
14764878 |
Cell line |
S2R+ |
Cell number and viability |
Luminescence |
Custom-made (HFA) |
Genome-wide |
dsRNA |
Z-score |
> |
|
|
41942 |
FBgn0002783 |
mor |
DRSC15378 |
weak |
Binucleate cells with microtubule extensions |
|
no |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
GR00037-A-1 |
41942 |
|
mor |
np |
> 2.5 |
Upregulation of JAK/STAT pathway |
|
no |
|
JAK/STAT pathway regulation (1) |
Genome-wide RNAi analysis of JAK/STAT signaling components in Drosophila. |
Baeg et al. |
2005 |
16055650 |
Cell line |
S2-NP |
JAK/STAT pathway reporter |
Luminescence |
rp |
Genome-wide |
dsRNA |
Fold change of relative luciferase units |
Complex criteria |
|
|
41942 |
FBgn0002783 |
mor |
LD25286 |
sp |
none |
|
no |
library: DGC2 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
41942 |
FBgn0002783 |
mor |
LD06146 |
sp |
none |
|
no |
library: DGC1 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
41942 |
CG18740 |
mor |
np |
np |
Defects in commissures; loss of neurons in peripheral nervous system |
|
no |
novel phenotype |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
GR00065-A |
41942 |
CG18740 |
mor |
mor |
np |
none |
|
no |
|
Dendrite pattern formation |
Genome-wide analyses identify transcription factors required for proper morphogenesis of Drosophila sensory neuron dendrites. |
Parrish et al. |
2006 |
16547170 |
Tissue |
GAL4221 |
mCD8 protein expression |
Fluorescence |
Custom-made |
Transcription factors |
UAS-IR construct |
np |
Phenotypes in multiple blind tests |
Additional information about secondary screens |
GR00131-A-1 |
41942 |
|
mor |
DRSC15378 |
50 - 75 |
Altered mitochondrial Ca2+ and/or H+ levels |
|
no |
|
Mitochondrial Ca2+/H+ antiporter regulation (1) |
Genome-wide RNAi screen identifies Letm1 as a mitochondrial Ca2+/H+ antiporter. |
Jiang et al. |
2009 |
19797662 |
Cell line |
S2 |
mt-pericam protein expression (reporter of mitochondrial Ca2+ and H+ levels) |
Fluorescence |
np |
Genome-wide |
dsRNA |
Percentage inhibition |
Class I: > 75; class II: 50-75; class III: 25–50 |
|
GR00131-A-1 |
41942 |
|
mor |
DRSC27980 |
50 - 75 |
Altered mitochondrial Ca2+ and/or H+ levels |
|
no |
|
Mitochondrial Ca2+/H+ antiporter regulation (1) |
Genome-wide RNAi screen identifies Letm1 as a mitochondrial Ca2+/H+ antiporter. |
Jiang et al. |
2009 |
19797662 |
Cell line |
S2 |
mt-pericam protein expression (reporter of mitochondrial Ca2+ and H+ levels) |
Fluorescence |
np |
Genome-wide |
dsRNA |
Percentage inhibition |
Class I: > 75; class II: 50-75; class III: 25–50 |
|
GR00134-A-1 |
41942 |
CG18740 |
mor |
6969 |
np |
Lethal |
|
no |
early pupal |
Muscle morphogenesis and function (1) |
Systematic genetic analysis of muscle morphogenesis and function in Drosophila. |
Schnorrer et al. |
2010 |
20220848 |
Tissue |
Mef2-GAL4 |
Posture, locomotion, flight and viability |
Visual inspection |
np |
Genome-wide |
UAS-IR construct |
rp |
S19 > 0.5 |
|
GR00135-A-1 |
41942 |
CG18740 |
mor |
6969 |
1.04 |
none |
|
yes |
|
Heat nociception (1) |
A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionarily conserved pain gene. |
Neely et al. |
2010 |
21074052 |
Organism |
elav-GAL4 |
Noxious heat avoidance and viability |
Fly count |
np |
Genome-wide |
UAS-IR construct |
Z-score |
> 1.65 |
Additional information about secondary screens (geotactic, phototaxis, and temperature sensitivity) |
GR00138-A-1 |
41942 |
CG18740 |
|
6969 |
0.63 |
Adult lethal |
|
yes |
|
Heart development and function (1) |
A global in vivo Drosophila RNAi screen identifies NOT3 as a conserved regulator of heart function. |
Neely et al. |
2010 |
20371351 |
Tissue |
TinCΔ4 12a-Gal4 |
Viability |
Fly count |
np |
Selected genes |
UAS-IR construct |
Developmental lethality |
< |
|
GR00138-A-2 |
41942 |
CG18740 |
|
6969 |
3.22 |
Decreased viability |
|
no |
|
Heart development and function (2) |
A global in vivo Drosophila RNAi screen identifies NOT3 as a conserved regulator of heart function. |
Neely et al. |
2010 |
20371351 |
Tissue |
TinCΔ4 12a-Gal4 |
Viability |
Fly count |
np |
Selected genes |
UAS-IR construct |
Z-score |
> 3 |
|
GR00139-A |
41942 |
|
mor |
6969 |
sp |
Lethal |
|
yes |
|
Fly viability and adult morphology |
A genome-wide transgenic RNAi library for conditional gene inactivation in Drosophila. |
Dietzl et al. |
2007 |
17625558 |
Organism |
Act5C-GAL4 |
Adult morphology and viability |
Visual inspection |
Custom-made |
Selected and random genes |
UAS-IR construct |
Phenotype strength |
np |
Additional information about secondary screens (MS1096-GAL4, ey-GAL4, GMR-GAL4 and pnr-GAL4) |
GR00142-A-1 |
41942 |
CG18740 |
mor |
6969 |
0.275862068965517 |
none |
|
no |
|
Serratia marcescens infection (1) |
Genome-wide RNAi screen identifies genes involved in intestinal pathogenic bacterial infection. |
Cronin et al. |
2009 |
19520911 |
Organism |
HSP70-GAL4; TubGAL80ts |
Heat shock and viability |
Fly count |
np |
Random genes |
UAS-IR construct |
Days life time (LT50) |
< -1.5 SD OR > 2 SD |
|
GR00144-A-4 |
41942 |
CG18740 |
|
6969 |
sp |
Completely lethal (pupal) |
|
no |
|
Notch pathway regulation (4) |
Genome-wide analysis of Notch signalling in Drosophila by transgenic RNAi. |
Mummery-Widmer et al. |
2009 |
19363474 |
Tissue |
pnr-GAL4 |
External sensory organ morphology and viability |
Visual inspection |
np |
Genome-wide |
UAS-IR construct |
Phenotype strength |
np |
|
GR00152-A |
41942 |
CG18740 |
mor |
np |
-2.0579 |
Downregulation of Notch pathway after Notch stimulation |
|
no |
N(delta)ecn Notch stimulation; m3-luc normalization |
Notch induced transcription |
Modifiers of notch transcriptional activity identified by genome-wide RNAi. |
Mourikis et al. |
2010 |
20959007 |
Cell line |
Kc167 |
Notch pathway reporter |
Luminescence |
np |
Genome-wide |
dsRNA |
Z-score |
< -2 OR > 2 (con-luc) OR < -1.8 OR > 1.8 (m3-luc) |
Additional information about secondary screens |
GR00152-A |
41942 |
CG18740 |
mor |
np |
1.2717 |
none |
|
no |
without Notch stimulation |
Notch induced transcription |
Modifiers of notch transcriptional activity identified by genome-wide RNAi. |
Mourikis et al. |
2010 |
20959007 |
Cell line |
Kc167 |
Notch pathway reporter |
Luminescence |
np |
Genome-wide |
dsRNA |
Z-score |
< -2 OR > 2 (con-luc) OR < -1.8 OR > 1.8 (m3-luc) |
Additional information about secondary screens |
GR00152-A |
41942 |
CG18740 |
mor |
np |
-0.58531 |
none |
|
no |
N(delta)ecn Notch stimulation; con-luc normalization |
Notch induced transcription |
Modifiers of notch transcriptional activity identified by genome-wide RNAi. |
Mourikis et al. |
2010 |
20959007 |
Cell line |
Kc167 |
Notch pathway reporter |
Luminescence |
np |
Genome-wide |
dsRNA |
Z-score |
< -2 OR > 2 (con-luc) OR < -1.8 OR > 1.8 (m3-luc) |
Additional information about secondary screens |
GR00170-A-1 |
41942 |
|
moira |
DRSC15378 |
-5.3 |
Decreased HIF dependent transcription with desferrioxamine |
|
yes |
|
HIF-dependent transcription (1) |
Drosophila genome-wide RNAi screen identifies multiple regulators of HIF-dependent transcription in hypoxia. |
Dekanty et al. |
2010 |
20585616 |
Cell line |
S2 |
Hypoxia inducible HRE reporter |
Luminescence |
DRSC 1.0 library |
Genome-wide |
dsRNA |
Z-score |
< |
|
GR00170-A-2 |
41942 |
|
moira |
DRSC32754 |
78.6 |
Decreased HIF dependent transcription with desferrioxamine |
|
yes |
group A |
HIF-dependent transcription (2) |
Drosophila genome-wide RNAi screen identifies multiple regulators of HIF-dependent transcription in hypoxia. |
Dekanty et al. |
2010 |
20585616 |
Cell line |
S2 |
Hypoxia inducible HRE reporter |
Luminescence |
DRSC 2.0 library |
Selected genes |
dsRNA |
Percentage |
Group A: > 75 %; group B: 50 – 75 % by at least one dsRNA |
|
GR00170-A-2 |
41942 |
|
moira |
DRSC32753 |
83.1 |
Decreased HIF dependent transcription with desferrioxamine |
|
yes |
group A |
HIF-dependent transcription (2) |
Drosophila genome-wide RNAi screen identifies multiple regulators of HIF-dependent transcription in hypoxia. |
Dekanty et al. |
2010 |
20585616 |
Cell line |
S2 |
Hypoxia inducible HRE reporter |
Luminescence |
DRSC 2.0 library |
Selected genes |
dsRNA |
Percentage |
Group A: > 75 %; group B: 50 – 75 % by at least one dsRNA |
|
GR00170-A-3 |
41942 |
|
Bap155/Moira |
DRSC32754 |
77.9 |
Decreased HIF-dependent transcription under hypoxia |
|
no |
|
HIF-dependent transcription (3) |
Drosophila genome-wide RNAi screen identifies multiple regulators of HIF-dependent transcription in hypoxia. |
Dekanty et al. |
2010 |
20585616 |
Cell line |
S2 |
Hypoxia inducible HRE reporter |
Luminescence |
DRSC 2.0 library |
Selected genes |
dsRNA |
Percentage |
> |
|
GR00170-A-3 |
41942 |
|
Bap155/Moira |
DRSC32753 |
77.5 |
Decreased HIF-dependent transcription under hypoxia |
|
no |
|
HIF-dependent transcription (3) |
Drosophila genome-wide RNAi screen identifies multiple regulators of HIF-dependent transcription in hypoxia. |
Dekanty et al. |
2010 |
20585616 |
Cell line |
S2 |
Hypoxia inducible HRE reporter |
Luminescence |
DRSC 2.0 library |
Selected genes |
dsRNA |
Percentage |
> |
|
GR00183-A |
41942 |
FBgn0002783 |
mor |
6969 |
sp |
Neuroblast more large cells, ganglion mother cell longer lineages, neuroblast overproliferation, lethal |
|
yes |
|
Self-renewal and differentiation in neural stem cells |
Genome-wide analysis of self-renewal in Drosophila neural stem cells by transgenic RNAi. |
Neumueller et al. |
2011 |
21549331 |
Tissue |
insc-GAL4 |
Number and size of neuroblasts, ganglion mother cells, intracellular GFP aggregates and viability |
Fluorescence |
np |
Genome-wide |
UAS-IR construct |
Phenotype strength |
> 1 |
Additional information about a secondary screen (KK library) |
GR00190-A-1 |
41942 |
FBgn0002783 |
mor |
6969 |
-0.672 |
Decreased triglyceride expression |
|
yes |
|
Adiposity regulation (1) |
Drosophila genome-wide obesity screen reveals hedgehog as a determinant of brown versus white adipose cell fate. |
Pospisilik et al. |
2010 |
20074523 |
Organism |
Hsp70-GAL4;Tub-GAL80ts |
Total fly triglyceride expression |
Colorimetrics |
np |
Genome-wide |
UAS-IR construct |
Triglyceride change |
Z-score > 1.65 after 3 screening rounds |
Additional information about the primary screen |
GR00190-A-2 |
41942 |
FBgn0002783 |
mor |
6969 |
-0.378 |
Decreased triglyceride expression |
|
no |
|
Adiposity regulation (2) |
Drosophila genome-wide obesity screen reveals hedgehog as a determinant of brown versus white adipose cell fate. |
Pospisilik et al. |
2010 |
20074523 |
Tissue |
nsyb-GAL4 |
Total fly triglyceride expression |
Colorimetrics |
np |
Selected genes |
UAS-IR construct |
Triglyceride change |
> 0.25 OR <-0.25 (change >25%) |
Additional information about the primary screen |
GR00190-A-3 |
41942 |
FBgn0002783 |
mor |
6969 |
-1 |
Decreased triglyceride expression |
|
no |
|
Adiposity regulation (3) |
Drosophila genome-wide obesity screen reveals hedgehog as a determinant of brown versus white adipose cell fate. |
Pospisilik et al. |
2010 |
20074523 |
Tissue |
C57-GAL4 |
Total fly triglyceride expression |
Colorimetrics |
np |
Selected genes |
UAS-IR construct |
Triglyceride change |
> 0.25 OR <-0.25 (change >25%) |
Additional information about the primary screen |
GR00190-A-4 |
41942 |
FBgn0002783 |
mor |
6969 |
d/l |
Lethal or developmental delay |
|
no |
|
Adiposity regulation (4) |
Drosophila genome-wide obesity screen reveals hedgehog as a determinant of brown versus white adipose cell fate. |
Pospisilik et al. |
2010 |
20074523 |
Tissue |
oe-GAL4 |
Total fly triglyceride expression |
Colorimetrics |
np |
Selected genes |
UAS-IR construct |
Triglyceride change |
> 0.25 OR <-0.25 (change >25%) |
Additional information about the primary screen |
GR00190-A-5 |
41942 |
FBgn0002783 |
mor |
6969 |
d/l |
Lethal or developmental delay |
|
no |
|
Adiposity regulation (5) |
Drosophila genome-wide obesity screen reveals hedgehog as a determinant of brown versus white adipose cell fate. |
Pospisilik et al. |
2010 |
20074523 |
Tissue |
ppl-GAL4 |
Total fly triglyceride expression |
Colorimetrics |
np |
Selected genes |
UAS-IR construct |
Triglyceride change |
> 0.25 OR <-0.25 (change >25%) |
Additional information about the primary screen |
GR00217-A-1 |
41942 |
CG18740 |
mor |
np |
medium |
Decreased WgRluc and not changed sFluc protein expression |
|
no |
|
Wg pathway regulation (1) |
A genome-wide RNA interference screen uncovers two p24 proteins as regulators of Wingless secretion. |
Port et al. |
2011 |
21886182 |
Cell line |
S2R+ |
WgRluc and sFluc protein expression |
Luminescence |
np |
Genome-wide |
dsRNA |
Phenotype strength |
Complex criteria |
Phenotype strength categories: strong: both duplicates 2 standard deviations (SD) below plate mean; medium: both duplicates 1 SD below plate mean; weak: one duplicate 2 SD below plate mean, the other not significantly changed; additional information about secondary screens (hhGAL4 and eyGAL4 GMR–GAL4) |
GR00218-S |
41942 |
CG18740 |
mor |
AMB18121 |
5.83 |
Downregulation of Hippo pathway |
|
no |
|
Hippo pathway regulation |
Salt-inducible kinases regulate growth through the Hippo signalling pathway in Drosophila |
Wehr et al. |
2013 |
23263283 |
Cell line |
S2R+ |
Hippo pathway reporter |
Luminescence |
np |
Genome-wide |
dsRNA |
Z-score |
> 3 OR < -3 |
Author-submitted data. Primary screen |
GR00245-A |
41942 |
FBgn0002783 |
mor |
DRSC15378 |
np |
Decreased formation of mutant Huntingtin (Httex1-Qn) protein aggregates |
|
yes |
validated |
Huntingtin (Htt) aggregates formation |
A genomewide RNA interference screen for modifiers of aggregates formation by mutant Huntingtin in Drosophila. |
Zhang et al. |
2010 |
20100940 |
Cell line |
S2 |
Mutant Httex1-Qn-eGFP protein expression and DNA content |
Fluorescence |
Version 1 and np |
Genome-wide |
dsRNA |
Aggregate number, size, and signal intensity |
> 2 standard deviations |
Additional information about secondary screens (reproducibility and non-overlaping dsRNAs) |
GR00273-A-1 |
41942 |
FBgn0002783 |
mor |
DRSC27980 |
3 |
Effect on Polycomb (Pc) foci |
|
|
|
Polycomb group (PcG) proteins regulation (1) |
Identification of Regulators of the Three-Dimensional Polycomb Organization by a Microscopy-Based Genome-wide RNAi Screen |
Gonzalez et al. |
2014 |
24703951 |
Cell line |
S2 |
Pc-GFP protein localization |
Fluorescence |
DRSC |
Genome-wide and transcription factors |
dsRNA |
Visual inspection |
1 |
Additional phenotypic clustering screen available. |
GR00273-A-1 |
41942 |
FBgn0002783 |
mor |
DRSC15378 |
3 |
Effect on Polycomb (Pc) foci |
|
|
|
Polycomb group (PcG) proteins regulation (1) |
Identification of Regulators of the Three-Dimensional Polycomb Organization by a Microscopy-Based Genome-wide RNAi Screen |
Gonzalez et al. |
2014 |
24703951 |
Cell line |
S2 |
Pc-GFP protein localization |
Fluorescence |
DRSC |
Genome-wide and transcription factors |
dsRNA |
Visual inspection |
1 |
Additional phenotypic clustering screen available. |
GR00273-A-2 |
41942 |
FBgn0002783 |
mor |
DRSC27980 |
np |
Increased Polycomb (Pc) foci intensity |
|
|
|
Polycomb group (PcG) proteins regulation (2) |
Identification of Regulators of the Three-Dimensional Polycomb Organization by a Microscopy-Based Genome-wide RNAi Screen |
Gonzalez et al. |
2014 |
24703951 |
Cell line |
S2 |
Polycomb-GFP protein localization |
Fluorescence |
DRSC |
Selected genes |
dsRNA |
Visual inspection |
np |
|
GR00273-A-2 |
41942 |
FBgn0002783 |
mor |
DRSC15378 |
np |
Increased Polycomb (Pc) foci intensity |
|
|
|
Polycomb group (PcG) proteins regulation (2) |
Identification of Regulators of the Three-Dimensional Polycomb Organization by a Microscopy-Based Genome-wide RNAi Screen |
Gonzalez et al. |
2014 |
24703951 |
Cell line |
S2 |
Polycomb-GFP protein localization |
Fluorescence |
DRSC |
Selected genes |
dsRNA |
Visual inspection |
np |
|
GR00282-A |
41942 |
CG18740 |
mor |
110712 |
np |
none |
|
|
|
piRNA pathway regulation |
The Genetic Makeup of the Drosophila piRNA Pathway |
Handler |
2013 |
23665231 |
Tissue |
tj-GAL4 |
Gypsy transposon expression |
Microscopy |
VDRC |
Selected genes |
UAS-IR construct |
Visual inspection |
np |
See comment for ovarian morphology data. Gene expression data shown in the comment derive from an ovarian stem cell line. VDRC library: KK and GD used, see phenotype data |
GR00282-A |
41942 |
CG18740 |
mor |
6969 |
np |
none |
|
|
|
piRNA pathway regulation |
The Genetic Makeup of the Drosophila piRNA Pathway |
Handler |
2013 |
23665231 |
Tissue |
tj-GAL4 |
Gypsy transposon expression |
Microscopy |
VDRC |
Selected genes |
UAS-IR construct |
Visual inspection |
np |
See comment for ovarian morphology data. Gene expression data shown in the comment derive from an ovarian stem cell line. VDRC library: KK and GD used, see phenotype data |
GR00284-A |
41942 |
CG18740 |
mor |
110712 |
0.06328251739200463 |
none |
|
|
|
piRNA pathway regulation |
A Transcriptome-wide RNAi Screen in the Drosophila Ovary Reveals Factors of the Germline piRNA Pathway |
Czech et al. |
2013 |
23665227 |
Tissue |
nos-GAL4 |
Transposon expression |
qPCR |
VDRC |
Selected genes |
UAS-IR construct |
Z-score |
Weak < -1.5; strong: < -2 |
KK and GD libraries used (see phenotype data) |
GR00311-A |
41942 |
FBgn0002783 |
mor |
DRSC15378 |
np |
none |
|
|
|
Actin and microtubule morphology |
Comparative RNAi screening identifies a conserved core metazoan actinome by phenotype |
Rohn et al. |
2011 |
21893601 |
Cell line |
S2R+ |
Alpha-tubulin and F-actin protein expression |
Fluorescence |
DRSC |
Genome-wide |
dsRNA |
Visual inspection |
np |
Exact phenotypes are shown in the comment section. Several genes were indicated as hits but no phenotype was provided. The screen data plus images is available at http://jcb-dataviewer.rupress.org/jcb/browse/4609/S2. |
GR00326-A |
41942 |
FBgn0002783 |
mor |
18740 |
np |
none |
|
|
|
Synapse formation and maintenance |
A large-scale RNAi screen identifies functional classes of genes shaping synaptic development and maintenance |
Valakh et al. |
2012 |
22542760 |
Tissue |
Elav-Gal4 |
Neuromuscular junction morphology |
Fluorescence |
VDRC |
Selected genes |
UAS-IR construct |
Visual inspection |
np |
For further phenotype explanations sp. |
GR00335-A |
41942 |
FBgn0002783 |
mor |
GL00477 |
np |
none |
|
|
|
Germline stem cell (GSC) regulation |
A Regulatory Network of Drosophila Germline Stem Cell Self-Renewal |
Yan et al. |
2014 |
24576427 |
Tissue |
MTD-GAL4 or UAS-dcr2; nanos-GAL4 |
Spectrin and vasa protein expression |
Fluorescence |
TRiP |
Selected genes |
UAS-IR construct |
Visual inspection |
np |
More detailed phenotypes for some genes are shown in the comment. Various VALIUM vectors were used. |
GR00335-A |
41942 |
FBgn0002783 |
mor |
GLV21027 |
np |
Embryonic lethal |
|
|
most embryonic lethal |
Germline stem cell (GSC) regulation |
A Regulatory Network of Drosophila Germline Stem Cell Self-Renewal |
Yan et al. |
2014 |
24576427 |
Tissue |
MTD-GAL4 or UAS-dcr2; nanos-GAL4 |
Spectrin and vasa protein expression |
Fluorescence |
TRiP |
Selected genes |
UAS-IR construct |
Visual inspection |
np |
More detailed phenotypes for some genes are shown in the comment. Various VALIUM vectors were used. |
GR00335-A |
41942 |
FBgn0002783 |
mor |
HMS01267 |
np |
Embryonic lethal |
|
|
|
Germline stem cell (GSC) regulation |
A Regulatory Network of Drosophila Germline Stem Cell Self-Renewal |
Yan et al. |
2014 |
24576427 |
Tissue |
MTD-GAL4 or UAS-dcr2; nanos-GAL4 |
Spectrin and vasa protein expression |
Fluorescence |
TRiP |
Selected genes |
UAS-IR construct |
Visual inspection |
np |
More detailed phenotypes for some genes are shown in the comment. Various VALIUM vectors were used. |
|
41942 |
FBgn0002783 |
np |
np |
sp |
none |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
GR00367-S |
41942 |
CG18740 |
|
6969 |
np |
liquid clearance defect |
|
|
VDRC |
Drosophila airway maturation |
Transient junction anisotropies orient annular cell polarization in the Drosophila airway tubes |
Hosono et al. |
2015 |
26551273 |
Tissue |
btl-GAL4 |
Liquid clearance defect and viability |
Visual inspection |
VDRC, Trip, NIG |
Genome-wide |
UAS-IR construct |
Frequency |
>30% |
|
GR00379-A-1 |
41942 |
CG18740 |
|
110712 |
-0.29976236809079276 |
none |
|
|
No phenotype in egg laying/hatching or larvae in egg laying or larvae |
Stem cell maintenance |
Regulation of Ribosome Biogenesis and Protein Synthesis Controls Germline Stem Cell Differentiation |
Sanchez et al. |
2016 |
26669894 |
Organism |
nanos-GAL4 |
nos and yTub37c mRNA expression |
qPCR |
VDRC |
Selected genes |
UAS-IR construct |
Z-score |
Low: 1 - 2.5; Medium: 2.5 - 4; High: > |
Selected genes are: transcriptome-wide in female Drosophila. Additional phenotypes (egg laying/hatching) noted in the comment section. Subset libraries from VDRC (KK or GD) can be found in a column next to the comment field. |
GR00388-A |
41942 |
CG18740 |
|
GD6969 |
|
Lethal |
|
|
|
Regulation of intestinal stem cells (ISC) |
Genome-wide RNAi Screen Identifies Networks Involved in Intestinal Stem Cell Regulation in Drosophila |
Zeng et al. |
2015 |
25704823 |
Tissue |
act5C-GAL4 |
Viability |
Visual inspection |
VDRC and BDSC |
Genome-wide |
UAS-IR construct |
np |
np |
Lethal transgenic lines identified from the primary screen were crossed with temperature-sensitive esg-GAL4 flies. Phenotypes of ISCs from the dissected midguts are shown in the "Comment" section. |
GR00388-A |
41942 |
CG18740 |
|
BL34919 |
|
Lethal |
|
|
|
Regulation of intestinal stem cells (ISC) |
Genome-wide RNAi Screen Identifies Networks Involved in Intestinal Stem Cell Regulation in Drosophila |
Zeng et al. |
2015 |
25704823 |
Tissue |
act5C-GAL4 |
Viability |
Visual inspection |
VDRC and BDSC |
Genome-wide |
UAS-IR construct |
np |
np |
Lethal transgenic lines identified from the primary screen were crossed with temperature-sensitive esg-GAL4 flies. Phenotypes of ISCs from the dissected midguts are shown in the "Comment" section. |