| 119965637 |
119965660 |
2 |
- |
26472758 |
Jiyoye |
viability |
GGAAAACAGAGTACCTGCAATGG |
PTPN4 |
ENSG00000088179 |
-0.4305531895952497 |
[251] |
[140] |
-3 |
hSpCas9 |
negative selection |
131053 |
119965627 |
119965650 |
2 |
- |
26472758 |
Jiyoye |
viability |
GTACCTGCAATGGACAACAACGG |
PTPN4 |
ENSG00000088179 |
-1.0571056367928193 |
[148] |
[53] |
-6 |
hSpCas9 |
negative selection |
131054 |
119932530 |
119932553 |
2 |
- |
26472758 |
Jiyoye |
viability |
TACTGATTAGGAGTTCCCGGTGG |
PTPN4 |
ENSG00000088179 |
0.046919167959411645 |
[266] |
[207] |
0 |
hSpCas9 |
negative selection |
131055 |
119955257 |
119955280 |
2 |
- |
26472758 |
Jiyoye |
viability |
GCTGGATCATTGACTCCCGCAGG |
PTPN4 |
ENSG00000088179 |
0.23606346511311888 |
[151] |
[134] |
1 |
hSpCas9 |
negative selection |
131056 |
119809919 |
119809942 |
2 |
+ |
26472758 |
Jiyoye |
viability |
AGACAGACAGCATACTGAAGTGG |
PTPN4 |
ENSG00000088179 |
1.5279275409664836 |
[62] |
[136] |
8 |
hSpCas9 |
negative selection |
131057 |
119882101 |
119882124 |
2 |
- |
26472758 |
Jiyoye |
viability |
GCAGCAGTATTAGAAGGACAGGG |
PTPN4 |
ENSG00000088179 |
1.3531355417929847 |
[67] |
[130] |
7 |
hSpCas9 |
negative selection |
131058 |
119932518 |
119932541 |
2 |
- |
26472758 |
Jiyoye |
viability |
GTTCCCGGTGGAGATCGTGATGG |
PTPN4 |
ENSG00000088179 |
-2.255789631216556 |
[75] |
[11] |
-8 |
hSpCas9 |
negative selection |
131059 |
119945082 |
119945105 |
2 |
+ |
26472758 |
Jiyoye |
viability |
TCACAAGAGACCCCTGGAGATGG |
PTPN4 |
ENSG00000088179 |
0.28561340162495996 |
[98] |
[90] |
2 |
hSpCas9 |
negative selection |
131060 |
119946539 |
119946562 |
2 |
- |
26472758 |
Jiyoye |
viability |
GCTACTCGAGACACAATCACAGG |
PTPN4 |
ENSG00000088179 |
-0.3297902126603327 |
[134] |
[80] |
-2 |
hSpCas9 |
negative selection |
131061 |
119951982 |
119952005 |
2 |
+ |
26472758 |
Jiyoye |
viability |
TGTGTCCCTAGACTGAATGAAGG |
PTPN4 |
ENSG00000088179 |
0.40717538150587274 |
[0] |
[0] |
3 |
hSpCas9 |
negative selection |
131062 |
119965637 |
119965660 |
2 |
- |
26472758 |
KBM7 |
viability |
GGAAAACAGAGTACCTGCAATGG |
PTPN4 |
ENSG00000088179 |
0.39073235639491105 |
[648,530] |
[441,289] |
4 |
hSpCas9 |
negative selection |
322171 |
119965627 |
119965650 |
2 |
- |
26472758 |
KBM7 |
viability |
GTACCTGCAATGGACAACAACGG |
PTPN4 |
ENSG00000088179 |
-0.40287324833881666 |
[406,535] |
[154,184] |
-4 |
hSpCas9 |
negative selection |
322172 |
119932530 |
119932553 |
2 |
- |
26472758 |
KBM7 |
viability |
TACTGATTAGGAGTTCCCGGTGG |
PTPN4 |
ENSG00000088179 |
0.27621236614710365 |
[985,497] |
[469,356] |
3 |
hSpCas9 |
negative selection |
322173 |
119955257 |
119955280 |
2 |
- |
26472758 |
KBM7 |
viability |
GCTGGATCATTGACTCCCGCAGG |
PTPN4 |
ENSG00000088179 |
0.5982721474657192 |
[604,405] |
[366,342] |
6 |
hSpCas9 |
negative selection |
322174 |
119809919 |
119809942 |
2 |
+ |
26472758 |
KBM7 |
viability |
AGACAGACAGCATACTGAAGTGG |
PTPN4 |
ENSG00000088179 |
0.03002319547485973 |
[545,427] |
[287,181] |
0 |
hSpCas9 |
negative selection |
322175 |
119882101 |
119882124 |
2 |
- |
26472758 |
KBM7 |
viability |
GCAGCAGTATTAGAAGGACAGGG |
PTPN4 |
ENSG00000088179 |
0.5001546147794187 |
[483,459] |
[510,138] |
5 |
hSpCas9 |
negative selection |
322176 |
119932518 |
119932541 |
2 |
- |
26472758 |
KBM7 |
viability |
GTTCCCGGTGGAGATCGTGATGG |
PTPN4 |
ENSG00000088179 |
-0.17690935228358406 |
[149,129] |
[46,67] |
-2 |
hSpCas9 |
negative selection |
322177 |
119945082 |
119945105 |
2 |
+ |
26472758 |
KBM7 |
viability |
TCACAAGAGACCCCTGGAGATGG |
PTPN4 |
ENSG00000088179 |
0.33167650800636994 |
[407,326] |
[195,233] |
3 |
hSpCas9 |
negative selection |
322178 |
119946539 |
119946562 |
2 |
- |
26472758 |
KBM7 |
viability |
GCTACTCGAGACACAATCACAGG |
PTPN4 |
ENSG00000088179 |
1.1306822758186992 |
[338,559] |
[652,318] |
9 |
hSpCas9 |
negative selection |
322179 |
119951982 |
119952005 |
2 |
+ |
26472758 |
KBM7 |
viability |
TGTGTCCCTAGACTGAATGAAGG |
PTPN4 |
ENSG00000088179 |
1.236266064419004 |
[12,0] |
[4,8] |
9 |
hSpCas9 |
negative selection |
322180 |
119965637 |
119965660 |
2 |
- |
26472758 |
Raji |
viability |
GGAAAACAGAGTACCTGCAATGG |
PTPN4 |
ENSG00000088179 |
1.751799886304998 |
[205] |
[160] |
9 |
hSpCas9 |
negative selection |
513289 |
119965627 |
119965650 |
2 |
- |
26472758 |
Raji |
viability |
GTACCTGCAATGGACAACAACGG |
PTPN4 |
ENSG00000088179 |
0.3087634232936041 |
[246] |
[70] |
3 |
hSpCas9 |
negative selection |
513290 |
119932530 |
119932553 |
2 |
- |
26472758 |
Raji |
viability |
TACTGATTAGGAGTTCCCGGTGG |
PTPN4 |
ENSG00000088179 |
0.593460371584298 |
[316] |
[110] |
5 |
hSpCas9 |
negative selection |
513291 |
119955257 |
119955280 |
2 |
- |
26472758 |
Raji |
viability |
GCTGGATCATTGACTCCCGCAGG |
PTPN4 |
ENSG00000088179 |
0.3483916348773945 |
[263] |
[77] |
3 |
hSpCas9 |
negative selection |
513292 |
119809919 |
119809942 |
2 |
+ |
26472758 |
Raji |
viability |
AGACAGACAGCATACTGAAGTGG |
PTPN4 |
ENSG00000088179 |
0.02131258524993196 |
[258] |
[60] |
0 |
hSpCas9 |
negative selection |
513293 |
119882101 |
119882124 |
2 |
- |
26472758 |
Raji |
viability |
GCAGCAGTATTAGAAGGACAGGG |
PTPN4 |
ENSG00000088179 |
1.1414913896938639 |
[208] |
[106] |
8 |
hSpCas9 |
negative selection |
513294 |
119932518 |
119932541 |
2 |
- |
26472758 |
Raji |
viability |
GTTCCCGGTGGAGATCGTGATGG |
PTPN4 |
ENSG00000088179 |
-0.5141048413726705 |
[79] |
[12] |
-4 |
hSpCas9 |
negative selection |
513295 |
119945082 |
119945105 |
2 |
+ |
26472758 |
Raji |
viability |
TCACAAGAGACCCCTGGAGATGG |
PTPN4 |
ENSG00000088179 |
0.13496936704549903 |
[258] |
[65] |
1 |
hSpCas9 |
negative selection |
513296 |
119946539 |
119946562 |
2 |
- |
26472758 |
Raji |
viability |
GCTACTCGAGACACAATCACAGG |
PTPN4 |
ENSG00000088179 |
0.5928103625438411 |
[159] |
[55] |
5 |
hSpCas9 |
negative selection |
513297 |
119951982 |
119952005 |
2 |
+ |
26472758 |
Raji |
viability |
TGTGTCCCTAGACTGAATGAAGG |
PTPN4 |
ENSG00000088179 |
-0.47757896534755684 |
[5] |
[0] |
-4 |
hSpCas9 |
negative selection |
513298 |
119965637 |
119965660 |
2 |
- |
26472758 |
K562 |
viability |
GGAAAACAGAGTACCTGCAATGG |
PTPN4 |
ENSG00000088179 |
-0.11342894147585825 |
[609] |
[475] |
-1 |
hSpCas9 |
negative selection |
704407 |
119965627 |
119965650 |
2 |
- |
26472758 |
K562 |
viability |
GTACCTGCAATGGACAACAACGG |
PTPN4 |
ENSG00000088179 |
1.1716623852311328 |
[304] |
[579] |
8 |
hSpCas9 |
negative selection |
704408 |
119932530 |
119932553 |
2 |
- |
26472758 |
K562 |
viability |
TACTGATTAGGAGTTCCCGGTGG |
PTPN4 |
ENSG00000088179 |
0.5040625442994664 |
[496] |
[594] |
4 |
hSpCas9 |
negative selection |
704409 |
119955257 |
119955280 |
2 |
- |
26472758 |
K562 |
viability |
GCTGGATCATTGACTCCCGCAGG |
PTPN4 |
ENSG00000088179 |
0.09595103430542895 |
[316] |
[285] |
0 |
hSpCas9 |
negative selection |
704410 |
119809919 |
119809942 |
2 |
+ |
26472758 |
K562 |
viability |
AGACAGACAGCATACTGAAGTGG |
PTPN4 |
ENSG00000088179 |
-0.048134765087402 |
[631] |
[515] |
0 |
hSpCas9 |
negative selection |
704411 |
119882101 |
119882124 |
2 |
- |
26472758 |
K562 |
viability |
GCAGCAGTATTAGAAGGACAGGG |
PTPN4 |
ENSG00000088179 |
0.7526240294035653 |
[385] |
[548] |
6 |
hSpCas9 |
negative selection |
704412 |
119932518 |
119932541 |
2 |
- |
26472758 |
K562 |
viability |
GTTCCCGGTGGAGATCGTGATGG |
PTPN4 |
ENSG00000088179 |
-0.7830620087556606 |
[158] |
[77] |
-4 |
hSpCas9 |
negative selection |
704413 |
119945082 |
119945105 |
2 |
+ |
26472758 |
K562 |
viability |
TCACAAGAGACCCCTGGAGATGG |
PTPN4 |
ENSG00000088179 |
-0.6700055406274791 |
[359] |
[190] |
-4 |
hSpCas9 |
negative selection |
704414 |
119946539 |
119946562 |
2 |
- |
26472758 |
K562 |
viability |
GCTACTCGAGACACAATCACAGG |
PTPN4 |
ENSG00000088179 |
0.4193969568350447 |
[379] |
[428] |
3 |
hSpCas9 |
negative selection |
704415 |
119951982 |
119952005 |
2 |
+ |
26472758 |
K562 |
viability |
TGTGTCCCTAGACTGAATGAAGG |
PTPN4 |
ENSG00000088179 |
4.888274917441171 |
[0] |
[24] |
9 |
hSpCas9 |
negative selection |
704416 |
119809875 |
119809898 |
2 |
- |
26627737 |
DLD1 |
viability |
ACATTGTAGGTTCTGCCAGCAGG |
PTPN4 |
ENSG00000088179 |
-0.513075176376711 |
[286] |
[27,68,87] |
-5 |
hSpCas9 |
negative selection |
808445 |
119862577 |
119862600 |
2 |
+ |
26627737 |
DLD1 |
viability |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
0.8585407079607179 |
[279] |
[89,222,164] |
8 |
hSpCas9 |
negative selection |
808446 |
119882102 |
119882125 |
2 |
- |
26627737 |
DLD1 |
viability |
GGCAGCAGTATTAGAAGGACAGG |
PTPN4 |
ENSG00000088179 |
1.1341935496342526 |
[144] |
[132,64,98] |
9 |
hSpCas9 |
negative selection |
808447 |
119932515 |
119932538 |
2 |
+ |
26627737 |
DLD1 |
viability |
CTTCCATCACGATCTCCACCGGG |
PTPN4 |
ENSG00000088179 |
0.6552054631524593 |
[505] |
[238,138,348] |
6 |
hSpCas9 |
negative selection |
808448 |
119934829 |
119934852 |
2 |
- |
26627737 |
DLD1 |
viability |
AACTGAAGATGGTCGTAACCGGG |
PTPN4 |
ENSG00000088179 |
0.14710578804296914 |
[464] |
[114,301,83] |
1 |
hSpCas9 |
negative selection |
808449 |
119946545 |
119946568 |
2 |
+ |
26627737 |
DLD1 |
viability |
ATTGTGTCTCGAGTAGCACCAGG |
PTPN4 |
ENSG00000088179 |
0.7994594895678209 |
[206] |
[85,168,88] |
7 |
hSpCas9 |
negative selection |
808450 |
119809875 |
119809898 |
2 |
- |
26627737 |
GBM cells |
viability after 5 days |
ACATTGTAGGTTCTGCCAGCAGG |
PTPN4 |
ENSG00000088179 |
-0.16058713686297627 |
[197] |
[107,81] |
-2 |
hSpCas9 |
negative selection |
890760 |
119862577 |
119862600 |
2 |
+ |
26627737 |
GBM cells |
viability after 5 days |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
0.11128437688707307 |
[226] |
[143,118] |
1 |
hSpCas9 |
negative selection |
890761 |
119882102 |
119882125 |
2 |
- |
26627737 |
GBM cells |
viability after 5 days |
GGCAGCAGTATTAGAAGGACAGG |
PTPN4 |
ENSG00000088179 |
0.7821002099029353 |
[89] |
[87,77] |
9 |
hSpCas9 |
negative selection |
890762 |
119932515 |
119932538 |
2 |
+ |
26627737 |
GBM cells |
viability after 5 days |
CTTCCATCACGATCTCCACCGGG |
PTPN4 |
ENSG00000088179 |
-0.031924100606918665 |
[223] |
[100,133] |
0 |
hSpCas9 |
negative selection |
890763 |
119934829 |
119934852 |
2 |
- |
26627737 |
GBM cells |
viability after 5 days |
AACTGAAGATGGTCGTAACCGGG |
PTPN4 |
ENSG00000088179 |
0.3005806107960705 |
[270] |
[226,130] |
4 |
hSpCas9 |
negative selection |
890764 |
119946545 |
119946568 |
2 |
+ |
26627737 |
GBM cells |
viability after 5 days |
ATTGTGTCTCGAGTAGCACCAGG |
PTPN4 |
ENSG00000088179 |
1.2614839542703937 |
[48] |
[53,71] |
9 |
hSpCas9 |
negative selection |
890765 |
119809875 |
119809898 |
2 |
- |
26627737 |
GBM cells |
viability after 13 days |
ACATTGTAGGTTCTGCCAGCAGG |
PTPN4 |
ENSG00000088179 |
0.5596793653777192 |
[197] |
[159,156] |
7 |
hSpCas9 |
negative selection |
973075 |
119862577 |
119862600 |
2 |
+ |
26627737 |
GBM cells |
viability after 13 days |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
0.22267757134662364 |
[226] |
[135,149] |
3 |
hSpCas9 |
negative selection |
973076 |
119882102 |
119882125 |
2 |
- |
26627737 |
GBM cells |
viability after 13 days |
GGCAGCAGTATTAGAAGGACAGG |
PTPN4 |
ENSG00000088179 |
0.4144119330356846 |
[89] |
[90,43] |
5 |
hSpCas9 |
negative selection |
973077 |
119932515 |
119932538 |
2 |
+ |
26627737 |
GBM cells |
viability after 13 days |
CTTCCATCACGATCTCCACCGGG |
PTPN4 |
ENSG00000088179 |
-0.11562551141673985 |
[223] |
[120,104] |
-1 |
hSpCas9 |
negative selection |
973078 |
119934829 |
119934852 |
2 |
- |
26627737 |
GBM cells |
viability after 13 days |
AACTGAAGATGGTCGTAACCGGG |
PTPN4 |
ENSG00000088179 |
0.26636048417030417 |
[270] |
[156,192] |
3 |
hSpCas9 |
negative selection |
973079 |
119946545 |
119946568 |
2 |
+ |
26627737 |
GBM cells |
viability after 13 days |
ATTGTGTCTCGAGTAGCACCAGG |
PTPN4 |
ENSG00000088179 |
1.632815135699516 |
[48] |
[82,81] |
9 |
hSpCas9 |
negative selection |
973080 |
119809875 |
119809898 |
2 |
- |
26627737 |
GBM cells |
viability after 21 days |
ACATTGTAGGTTCTGCCAGCAGG |
PTPN4 |
ENSG00000088179 |
0.5015435548676732 |
[197] |
[168,136] |
5 |
hSpCas9 |
negative selection |
1055390 |
119862577 |
119862600 |
2 |
+ |
26627737 |
GBM cells |
viability after 21 days |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
0.031346350703459314 |
[226] |
[136,115] |
0 |
hSpCas9 |
negative selection |
1055391 |
119882102 |
119882125 |
2 |
- |
26627737 |
GBM cells |
viability after 21 days |
GGCAGCAGTATTAGAAGGACAGG |
PTPN4 |
ENSG00000088179 |
1.126247200193722 |
[89] |
[112,100] |
9 |
hSpCas9 |
negative selection |
1055392 |
119932515 |
119932538 |
2 |
+ |
26627737 |
GBM cells |
viability after 21 days |
CTTCCATCACGATCTCCACCGGG |
PTPN4 |
ENSG00000088179 |
0.6162539626426755 |
[223] |
[208,165] |
6 |
hSpCas9 |
negative selection |
1055393 |
119934829 |
119934852 |
2 |
- |
26627737 |
GBM cells |
viability after 21 days |
AACTGAAGATGGTCGTAACCGGG |
PTPN4 |
ENSG00000088179 |
0.6763736414275106 |
[270] |
[251,219] |
6 |
hSpCas9 |
negative selection |
1055394 |
119946545 |
119946568 |
2 |
+ |
26627737 |
GBM cells |
viability after 21 days |
ATTGTGTCTCGAGTAGCACCAGG |
PTPN4 |
ENSG00000088179 |
1.6051755442561015 |
[48] |
[92,69] |
9 |
hSpCas9 |
negative selection |
1055395 |
119809875 |
119809898 |
2 |
- |
26627737 |
RPE1 |
viability after 9 days |
ACATTGTAGGTTCTGCCAGCAGG |
PTPN4 |
ENSG00000088179 |
0.3659528133883658 |
[527] |
[195,234] |
2 |
hSpCas9 |
negative selection |
1137705 |
119862577 |
119862600 |
2 |
+ |
26627737 |
RPE1 |
viability after 9 days |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
-0.9025911216396059 |
[965] |
[80,265] |
-6 |
hSpCas9 |
negative selection |
1137706 |
119882102 |
119882125 |
2 |
- |
26627737 |
RPE1 |
viability after 9 days |
GGCAGCAGTATTAGAAGGACAGG |
PTPN4 |
ENSG00000088179 |
0.2816141077773339 |
[571] |
[180,264] |
2 |
hSpCas9 |
negative selection |
1137707 |
119932515 |
119932538 |
2 |
+ |
26627737 |
RPE1 |
viability after 9 days |
CTTCCATCACGATCTCCACCGGG |
PTPN4 |
ENSG00000088179 |
-0.09619702563080279 |
[577] |
[215,108] |
0 |
hSpCas9 |
negative selection |
1137708 |
119934829 |
119934852 |
2 |
- |
26627737 |
RPE1 |
viability after 9 days |
AACTGAAGATGGTCGTAACCGGG |
PTPN4 |
ENSG00000088179 |
1.0500821525983917 |
[572] |
[439,282] |
6 |
hSpCas9 |
negative selection |
1137709 |
119946545 |
119946568 |
2 |
+ |
26627737 |
RPE1 |
viability after 9 days |
ATTGTGTCTCGAGTAGCACCAGG |
PTPN4 |
ENSG00000088179 |
-0.8720255402254651 |
[496] |
[29,155] |
-6 |
hSpCas9 |
negative selection |
1137710 |
119809875 |
119809898 |
2 |
- |
26627737 |
RPE1 |
viability after 12 days |
ACATTGTAGGTTCTGCCAGCAGG |
PTPN4 |
ENSG00000088179 |
-0.101080877338391 |
[527] |
[72,194] |
0 |
hSpCas9 |
negative selection |
1220020 |
119862577 |
119862600 |
2 |
+ |
26627737 |
RPE1 |
viability after 12 days |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
-0.6993864456314101 |
[965] |
[102,219] |
-5 |
hSpCas9 |
negative selection |
1220021 |
119882102 |
119882125 |
2 |
- |
26627737 |
RPE1 |
viability after 12 days |
GGCAGCAGTATTAGAAGGACAGG |
PTPN4 |
ENSG00000088179 |
0.09580140440711832 |
[571] |
[86,245] |
0 |
hSpCas9 |
negative selection |
1220022 |
119932515 |
119932538 |
2 |
+ |
26627737 |
RPE1 |
viability after 12 days |
CTTCCATCACGATCTCCACCGGG |
PTPN4 |
ENSG00000088179 |
0.34825053774407894 |
[577] |
[271,118] |
2 |
hSpCas9 |
negative selection |
1220023 |
119934829 |
119934852 |
2 |
- |
26627737 |
RPE1 |
viability after 12 days |
AACTGAAGATGGTCGTAACCGGG |
PTPN4 |
ENSG00000088179 |
1.8855702039336006 |
[572] |
[528,610] |
8 |
hSpCas9 |
negative selection |
1220024 |
119946545 |
119946568 |
2 |
+ |
26627737 |
RPE1 |
viability after 12 days |
ATTGTGTCTCGAGTAGCACCAGG |
PTPN4 |
ENSG00000088179 |
-1.3821138739657401 |
[496] |
[41,60] |
-7 |
hSpCas9 |
negative selection |
1220025 |
119809875 |
119809898 |
2 |
- |
26627737 |
RPE1 |
viability after 15 days |
ACATTGTAGGTTCTGCCAGCAGG |
PTPN4 |
ENSG00000088179 |
-0.6312032852158092 |
[527] |
[43,146] |
-4 |
hSpCas9 |
negative selection |
1302335 |
119862577 |
119862600 |
2 |
+ |
26627737 |
RPE1 |
viability after 15 days |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
-0.6574095428980256 |
[965] |
[130,213] |
-4 |
hSpCas9 |
negative selection |
1302336 |
119882102 |
119882125 |
2 |
- |
26627737 |
RPE1 |
viability after 15 days |
GGCAGCAGTATTAGAAGGACAGG |
PTPN4 |
ENSG00000088179 |
-0.2898020355883337 |
[571] |
[83,178] |
-2 |
hSpCas9 |
negative selection |
1302337 |
119932515 |
119932538 |
2 |
+ |
26627737 |
RPE1 |
viability after 15 days |
CTTCCATCACGATCTCCACCGGG |
PTPN4 |
ENSG00000088179 |
0.5861098776581825 |
[577] |
[416,79] |
3 |
hSpCas9 |
negative selection |
1302338 |
119934829 |
119934852 |
2 |
- |
26627737 |
RPE1 |
viability after 15 days |
AACTGAAGATGGTCGTAACCGGG |
PTPN4 |
ENSG00000088179 |
1.5254546046696502 |
[572] |
[459,472] |
7 |
hSpCas9 |
negative selection |
1302339 |
119946545 |
119946568 |
2 |
+ |
26627737 |
RPE1 |
viability after 15 days |
ATTGTGTCTCGAGTAGCACCAGG |
PTPN4 |
ENSG00000088179 |
-0.4512313109970423 |
[496] |
[27,174] |
-3 |
hSpCas9 |
negative selection |
1302340 |
119809875 |
119809898 |
2 |
- |
26627737 |
RPE1 |
viability after 18 days |
ACATTGTAGGTTCTGCCAGCAGG |
PTPN4 |
ENSG00000088179 |
0.6497569324520633 |
[527] |
[195,252] |
4 |
hSpCas9 |
negative selection |
1384650 |
119862577 |
119862600 |
2 |
+ |
26627737 |
RPE1 |
viability after 18 days |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
-0.47453474415612906 |
[965] |
[161,214] |
-3 |
hSpCas9 |
negative selection |
1384651 |
119882102 |
119882125 |
2 |
- |
26627737 |
RPE1 |
viability after 18 days |
GGCAGCAGTATTAGAAGGACAGG |
PTPN4 |
ENSG00000088179 |
-0.21189068518465165 |
[571] |
[53,217] |
-1 |
hSpCas9 |
negative selection |
1384652 |
119932515 |
119932538 |
2 |
+ |
26627737 |
RPE1 |
viability after 18 days |
CTTCCATCACGATCTCCACCGGG |
PTPN4 |
ENSG00000088179 |
-0.07027082942744389 |
[577] |
[237,52] |
0 |
hSpCas9 |
negative selection |
1384653 |
119934829 |
119934852 |
2 |
- |
26627737 |
RPE1 |
viability after 18 days |
AACTGAAGATGGTCGTAACCGGG |
PTPN4 |
ENSG00000088179 |
2.135802876041163 |
[572] |
[623,738] |
8 |
hSpCas9 |
negative selection |
1384654 |
119946545 |
119946568 |
2 |
+ |
26627737 |
RPE1 |
viability after 18 days |
ATTGTGTCTCGAGTAGCACCAGG |
PTPN4 |
ENSG00000088179 |
-0.5899344586836823 |
[496] |
[33,147] |
-4 |
hSpCas9 |
negative selection |
1384655 |
119809875 |
119809898 |
2 |
- |
26627737 |
HeLa |
viability after 8 days |
ACATTGTAGGTTCTGCCAGCAGG |
PTPN4 |
ENSG00000088179 |
-0.6568237645032317 |
[332] |
[203,57,41] |
-6 |
hSpCas9 |
negative selection |
1466965 |
119862577 |
119862600 |
2 |
+ |
26627737 |
HeLa |
viability after 8 days |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
1.1512192168135011 |
[164] |
[219,160,113] |
8 |
hSpCas9 |
negative selection |
1466966 |
119882102 |
119882125 |
2 |
- |
26627737 |
HeLa |
viability after 8 days |
GGCAGCAGTATTAGAAGGACAGG |
PTPN4 |
ENSG00000088179 |
0.2717331546712517 |
[185] |
[93,95,101] |
2 |
hSpCas9 |
negative selection |
1466967 |
119932515 |
119932538 |
2 |
+ |
26627737 |
HeLa |
viability after 8 days |
CTTCCATCACGATCTCCACCGGG |
PTPN4 |
ENSG00000088179 |
1.4292455767734917 |
[139] |
[247,88,172] |
8 |
hSpCas9 |
negative selection |
1466968 |
119934829 |
119934852 |
2 |
- |
26627737 |
HeLa |
viability after 8 days |
AACTGAAGATGGTCGTAACCGGG |
PTPN4 |
ENSG00000088179 |
2.8284863983575432 |
[68] |
[225,134,276] |
9 |
hSpCas9 |
negative selection |
1466969 |
119946545 |
119946568 |
2 |
+ |
26627737 |
HeLa |
viability after 8 days |
ATTGTGTCTCGAGTAGCACCAGG |
PTPN4 |
ENSG00000088179 |
-1.8672231467957237 |
[357] |
[28,66,29] |
-9 |
hSpCas9 |
negative selection |
1466970 |
119809875 |
119809898 |
2 |
- |
26627737 |
HeLa |
viability after 12 days |
ACATTGTAGGTTCTGCCAGCAGG |
PTPN4 |
ENSG00000088179 |
0.24341645236301124 |
[332] |
[130,245,101] |
2 |
hSpCas9 |
negative selection |
1549280 |
119862577 |
119862600 |
2 |
+ |
26627737 |
HeLa |
viability after 12 days |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
1.4626561664480573 |
[164] |
[324,119,129] |
8 |
hSpCas9 |
negative selection |
1549281 |
119882102 |
119882125 |
2 |
- |
26627737 |
HeLa |
viability after 12 days |
GGCAGCAGTATTAGAAGGACAGG |
PTPN4 |
ENSG00000088179 |
0.7160218820283906 |
[185] |
[67,164,139] |
6 |
hSpCas9 |
negative selection |
1549282 |
119932515 |
119932538 |
2 |
+ |
26627737 |
HeLa |
viability after 12 days |
CTTCCATCACGATCTCCACCGGG |
PTPN4 |
ENSG00000088179 |
1.1268773179143563 |
[139] |
[129,108,141] |
7 |
hSpCas9 |
negative selection |
1549283 |
119934829 |
119934852 |
2 |
- |
26627737 |
HeLa |
viability after 12 days |
AACTGAAGATGGTCGTAACCGGG |
PTPN4 |
ENSG00000088179 |
2.9588083125531286 |
[68] |
[174,190,300] |
9 |
hSpCas9 |
negative selection |
1549284 |
119946545 |
119946568 |
2 |
+ |
26627737 |
HeLa |
viability after 12 days |
ATTGTGTCTCGAGTAGCACCAGG |
PTPN4 |
ENSG00000088179 |
-1.3498500074619981 |
[357] |
[62,88,18] |
-8 |
hSpCas9 |
negative selection |
1549285 |
119809875 |
119809898 |
2 |
- |
26627737 |
HeLa |
viability after 15 days |
ACATTGTAGGTTCTGCCAGCAGG |
PTPN4 |
ENSG00000088179 |
0.4468440170948421 |
[332] |
[193,141,220] |
3 |
hSpCas9 |
negative selection |
1631595 |
119862577 |
119862600 |
2 |
+ |
26627737 |
HeLa |
viability after 15 days |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
1.27169778291247 |
[164] |
[253,133,91] |
8 |
hSpCas9 |
negative selection |
1631596 |
119882102 |
119882125 |
2 |
- |
26627737 |
HeLa |
viability after 15 days |
GGCAGCAGTATTAGAAGGACAGG |
PTPN4 |
ENSG00000088179 |
0.5992368951873961 |
[185] |
[139,122,77] |
5 |
hSpCas9 |
negative selection |
1631597 |
119932515 |
119932538 |
2 |
+ |
26627737 |
HeLa |
viability after 15 days |
CTTCCATCACGATCTCCACCGGG |
PTPN4 |
ENSG00000088179 |
0.6969449169709127 |
[139] |
[146,78,46] |
5 |
hSpCas9 |
negative selection |
1631598 |
119934829 |
119934852 |
2 |
- |
26627737 |
HeLa |
viability after 15 days |
AACTGAAGATGGTCGTAACCGGG |
PTPN4 |
ENSG00000088179 |
3.069850753469959 |
[68] |
[140,184,394] |
9 |
hSpCas9 |
negative selection |
1631599 |
119946545 |
119946568 |
2 |
+ |
26627737 |
HeLa |
viability after 15 days |
ATTGTGTCTCGAGTAGCACCAGG |
PTPN4 |
ENSG00000088179 |
-1.559283661018522 |
[357] |
[117,21,3] |
-8 |
hSpCas9 |
negative selection |
1631600 |
119809875 |
119809898 |
2 |
- |
26627737 |
HeLa |
viability after 18 days |
ACATTGTAGGTTCTGCCAGCAGG |
PTPN4 |
ENSG00000088179 |
0.44752044414995057 |
[332] |
[125,122,220] |
3 |
hSpCas9 |
negative selection |
1713910 |
119862577 |
119862600 |
2 |
+ |
26627737 |
HeLa |
viability after 18 days |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
1.2243277720873704 |
[164] |
[164,104,91] |
8 |
hSpCas9 |
negative selection |
1713911 |
119882102 |
119882125 |
2 |
- |
26627737 |
HeLa |
viability after 18 days |
GGCAGCAGTATTAGAAGGACAGG |
PTPN4 |
ENSG00000088179 |
0.6107438388000921 |
[185] |
[89,108,77] |
5 |
hSpCas9 |
negative selection |
1713912 |
119932515 |
119932538 |
2 |
+ |
26627737 |
HeLa |
viability after 18 days |
CTTCCATCACGATCTCCACCGGG |
PTPN4 |
ENSG00000088179 |
0.6940241774085706 |
[139] |
[92,71,46] |
5 |
hSpCas9 |
negative selection |
1713913 |
119934829 |
119934852 |
2 |
- |
26627737 |
HeLa |
viability after 18 days |
AACTGAAGATGGTCGTAACCGGG |
PTPN4 |
ENSG00000088179 |
3.082516887923441 |
[68] |
[93,158,394] |
9 |
hSpCas9 |
negative selection |
1713914 |
119946545 |
119946568 |
2 |
+ |
26627737 |
HeLa |
viability after 18 days |
ATTGTGTCTCGAGTAGCACCAGG |
PTPN4 |
ENSG00000088179 |
-1.4213288052179336 |
[357] |
[88,17,3] |
-8 |
hSpCas9 |
negative selection |
1713915 |
119809875 |
119809898 |
2 |
- |
26627737 |
HCT116 |
viability after 6 days |
ACATTGTAGGTTCTGCCAGCAGG |
PTPN4 |
ENSG00000088179 |
1.1974167684169643 |
[399] |
[363,22] |
6 |
hSpCas9 |
negative selection |
1796225 |
119862577 |
119862600 |
2 |
+ |
26627737 |
HCT116 |
viability after 6 days |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
4.0292332452164175 |
[135] |
[914,36] |
9 |
hSpCas9 |
negative selection |
1796226 |
119882102 |
119882125 |
2 |
- |
26627737 |
HCT116 |
viability after 6 days |
GGCAGCAGTATTAGAAGGACAGG |
PTPN4 |
ENSG00000088179 |
1.2686722095387757 |
[190] |
[130,39] |
6 |
hSpCas9 |
negative selection |
1796227 |
119932515 |
119932538 |
2 |
+ |
26627737 |
HCT116 |
viability after 6 days |
CTTCCATCACGATCTCCACCGGG |
PTPN4 |
ENSG00000088179 |
0.24811447311048251 |
[386] |
[137,35] |
1 |
hSpCas9 |
negative selection |
1796228 |
119934829 |
119934852 |
2 |
- |
26627737 |
HCT116 |
viability after 6 days |
AACTGAAGATGGTCGTAACCGGG |
PTPN4 |
ENSG00000088179 |
0.5128275449356359 |
[515] |
[49,151] |
3 |
hSpCas9 |
negative selection |
1796229 |
119946545 |
119946568 |
2 |
+ |
26627737 |
HCT116 |
viability after 6 days |
ATTGTGTCTCGAGTAGCACCAGG |
PTPN4 |
ENSG00000088179 |
-0.0055987529957918225 |
[354] |
[101,29] |
0 |
hSpCas9 |
negative selection |
1796230 |
119809875 |
119809898 |
2 |
- |
26627737 |
HCT116 |
viability after 8 days |
ACATTGTAGGTTCTGCCAGCAGG |
PTPN4 |
ENSG00000088179 |
-0.08918135540282417 |
[311] |
[171,148,163] |
-1 |
hSpCas9 |
negative selection |
1878540 |
119862577 |
119862600 |
2 |
+ |
26627737 |
HCT116 |
viability after 8 days |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
-0.7329761470339518 |
[350] |
[119,98,129] |
-7 |
hSpCas9 |
negative selection |
1878541 |
119882102 |
119882125 |
2 |
- |
26627737 |
HCT116 |
viability after 8 days |
GGCAGCAGTATTAGAAGGACAGG |
PTPN4 |
ENSG00000088179 |
0.19199514285481056 |
[189] |
[114,147,95] |
2 |
hSpCas9 |
negative selection |
1878542 |
119932515 |
119932538 |
2 |
+ |
26627737 |
HCT116 |
viability after 8 days |
CTTCCATCACGATCTCCACCGGG |
PTPN4 |
ENSG00000088179 |
0.02436590413827988 |
[185] |
[97,60,152] |
0 |
hSpCas9 |
negative selection |
1878543 |
119934829 |
119934852 |
2 |
- |
26627737 |
HCT116 |
viability after 8 days |
AACTGAAGATGGTCGTAACCGGG |
PTPN4 |
ENSG00000088179 |
-1.0076955743434566 |
[546] |
[195,142,111] |
-8 |
hSpCas9 |
negative selection |
1878544 |
119946545 |
119946568 |
2 |
+ |
26627737 |
HCT116 |
viability after 8 days |
ATTGTGTCTCGAGTAGCACCAGG |
PTPN4 |
ENSG00000088179 |
-0.2592330180922511 |
[130] |
[42,107,29] |
-3 |
hSpCas9 |
negative selection |
1878545 |
119809875 |
119809898 |
2 |
- |
26627737 |
HCT116 |
viability after 9 days |
ACATTGTAGGTTCTGCCAGCAGG |
PTPN4 |
ENSG00000088179 |
1.4768524405552288 |
[399] |
[160,404] |
8 |
hSpCas9 |
negative selection |
1960855 |
119862577 |
119862600 |
2 |
+ |
26627737 |
HCT116 |
viability after 9 days |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
1.1620228218957667 |
[135] |
[73,86] |
7 |
hSpCas9 |
negative selection |
1960856 |
119882102 |
119882125 |
2 |
- |
26627737 |
HCT116 |
viability after 9 days |
GGCAGCAGTATTAGAAGGACAGG |
PTPN4 |
ENSG00000088179 |
-0.19568369189261325 |
[190] |
[48,40] |
-1 |
hSpCas9 |
negative selection |
1960857 |
119932515 |
119932538 |
2 |
+ |
26627737 |
HCT116 |
viability after 9 days |
CTTCCATCACGATCTCCACCGGG |
PTPN4 |
ENSG00000088179 |
0.1460159947765901 |
[386] |
[91,131] |
1 |
hSpCas9 |
negative selection |
1960858 |
119934829 |
119934852 |
2 |
- |
26627737 |
HCT116 |
viability after 9 days |
AACTGAAGATGGTCGTAACCGGG |
PTPN4 |
ENSG00000088179 |
0.8584546580617721 |
[515] |
[408,123] |
6 |
hSpCas9 |
negative selection |
1960859 |
119946545 |
119946568 |
2 |
+ |
26627737 |
HCT116 |
viability after 9 days |
ATTGTGTCTCGAGTAGCACCAGG |
PTPN4 |
ENSG00000088179 |
-1.472358020490423 |
[354] |
[65,8] |
-8 |
hSpCas9 |
negative selection |
1960860 |
119809875 |
119809898 |
2 |
- |
26627737 |
HCT116 |
viability after 12 days |
ACATTGTAGGTTCTGCCAGCAGG |
PTPN4 |
ENSG00000088179 |
-0.8102639827817618 |
[311] |
[44,143,96] |
-7 |
hSpCas9 |
negative selection |
2043170 |
119862577 |
119862600 |
2 |
+ |
26627737 |
HCT116 |
viability after 12 days |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
-0.9288459678885552 |
[350] |
[57,92,142] |
-7 |
hSpCas9 |
negative selection |
2043171 |
119882102 |
119882125 |
2 |
- |
26627737 |
HCT116 |
viability after 12 days |
GGCAGCAGTATTAGAAGGACAGG |
PTPN4 |
ENSG00000088179 |
0.5126270045359491 |
[189] |
[177,132,112] |
5 |
hSpCas9 |
negative selection |
2043172 |
119932515 |
119932538 |
2 |
+ |
26627737 |
HCT116 |
viability after 12 days |
CTTCCATCACGATCTCCACCGGG |
PTPN4 |
ENSG00000088179 |
0.7571498631326421 |
[185] |
[258,107,118] |
6 |
hSpCas9 |
negative selection |
2043173 |
119934829 |
119934852 |
2 |
- |
26627737 |
HCT116 |
viability after 12 days |
AACTGAAGATGGTCGTAACCGGG |
PTPN4 |
ENSG00000088179 |
-0.7933038458782634 |
[546] |
[182,119,191] |
-7 |
hSpCas9 |
negative selection |
2043174 |
119946545 |
119946568 |
2 |
+ |
26627737 |
HCT116 |
viability after 12 days |
ATTGTGTCTCGAGTAGCACCAGG |
PTPN4 |
ENSG00000088179 |
0.26473726571497347 |
[130] |
[73,86,87] |
2 |
hSpCas9 |
negative selection |
2043175 |
119809875 |
119809898 |
2 |
- |
26627737 |
HCT116 |
viability after 15 days |
ACATTGTAGGTTCTGCCAGCAGG |
PTPN4 |
ENSG00000088179 |
-0.37177472495734243 |
[311] |
[127,134,150] |
-4 |
hSpCas9 |
negative selection |
2125485 |
119862577 |
119862600 |
2 |
+ |
26627737 |
HCT116 |
viability after 15 days |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
-0.7475131303904159 |
[350] |
[96,107,151] |
-6 |
hSpCas9 |
negative selection |
2125486 |
119882102 |
119882125 |
2 |
- |
26627737 |
HCT116 |
viability after 15 days |
GGCAGCAGTATTAGAAGGACAGG |
PTPN4 |
ENSG00000088179 |
0.5453904881240625 |
[189] |
[262,120,106] |
5 |
hSpCas9 |
negative selection |
2125487 |
119932515 |
119932538 |
2 |
+ |
26627737 |
HCT116 |
viability after 15 days |
CTTCCATCACGATCTCCACCGGG |
PTPN4 |
ENSG00000088179 |
0.6580132521897223 |
[185] |
[329,84,110] |
6 |
hSpCas9 |
negative selection |
2125488 |
119934829 |
119934852 |
2 |
- |
26627737 |
HCT116 |
viability after 15 days |
AACTGAAGATGGTCGTAACCGGG |
PTPN4 |
ENSG00000088179 |
-1.1397370201700623 |
[546] |
[142,161,122] |
-8 |
hSpCas9 |
negative selection |
2125489 |
119946545 |
119946568 |
2 |
+ |
26627737 |
HCT116 |
viability after 15 days |
ATTGTGTCTCGAGTAGCACCAGG |
PTPN4 |
ENSG00000088179 |
0.8412850070493191 |
[130] |
[99,153,145] |
7 |
hSpCas9 |
negative selection |
2125490 |
119809875 |
119809898 |
2 |
- |
26627737 |
HCT116 |
viability after 18 days |
ACATTGTAGGTTCTGCCAGCAGG |
PTPN4 |
ENSG00000088179 |
-0.4134691700990144 |
[311] |
[66,112,161] |
-4 |
hSpCas9 |
negative selection |
2207800 |
119862577 |
119862600 |
2 |
+ |
26627737 |
HCT116 |
viability after 18 days |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
-1.444006319426853 |
[350] |
[42,36,110] |
-8 |
hSpCas9 |
negative selection |
2207801 |
119882102 |
119882125 |
2 |
- |
26627737 |
HCT116 |
viability after 18 days |
GGCAGCAGTATTAGAAGGACAGG |
PTPN4 |
ENSG00000088179 |
0.8076422197353476 |
[189] |
[221,129,130] |
6 |
hSpCas9 |
negative selection |
2207802 |
119932515 |
119932538 |
2 |
+ |
26627737 |
HCT116 |
viability after 18 days |
CTTCCATCACGATCTCCACCGGG |
PTPN4 |
ENSG00000088179 |
0.6515080037047484 |
[185] |
[289,0,141] |
5 |
hSpCas9 |
negative selection |
2207803 |
119934829 |
119934852 |
2 |
- |
26627737 |
HCT116 |
viability after 18 days |
AACTGAAGATGGTCGTAACCGGG |
PTPN4 |
ENSG00000088179 |
-0.4985266332046015 |
[546] |
[172,231,151] |
-4 |
hSpCas9 |
negative selection |
2207804 |
119946545 |
119946568 |
2 |
+ |
26627737 |
HCT116 |
viability after 18 days |
ATTGTGTCTCGAGTAGCACCAGG |
PTPN4 |
ENSG00000088179 |
0.8411150039267756 |
[130] |
[106,84,151] |
6 |
hSpCas9 |
negative selection |
2207805 |
119860924 |
119860947 |
2 |
- |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
GTCTCAGCCTCCTGAGTAGCCAG |
PTPN4 |
ENSG00000088179 |
-0.29935217365489764 |
[71,81] |
[9,16] |
-1 |
dCas9-VP64 |
positive selection |
2389874 |
119791171 |
119791194 |
2 |
- |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
TGTGCCACTGCACTCCAACCCAG |
PTPN4 |
ENSG00000088179 |
-0.3603328806955275 |
[13,219] |
[8,31] |
-2 |
dCas9-VP64 |
positive selection |
2442213 |
119883990 |
119884013 |
2 |
- |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
CAGGAGAATGGCATGAACCCGGG |
PTPN4 |
ENSG00000088179 |
-0.6383309141464126 |
[28,8] |
[1,1] |
-3 |
dCas9-VP64 |
positive selection |
2452417 |
119860924 |
119860947 |
2 |
- |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
GTCTCAGCCTCCTGAGTAGCCAG |
PTPN4 |
ENSG00000088179 |
0.6576184974956476 |
[246,231] |
[69,172] |
5 |
dCas9-VP64 |
positive selection |
2485129 |
119791171 |
119791194 |
2 |
- |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
TGTGCCACTGCACTCCAACCCAG |
PTPN4 |
ENSG00000088179 |
2.8983611220710697 |
[175,93] |
[650,31] |
9 |
dCas9-VP64 |
positive selection |
2537468 |
119883990 |
119884013 |
2 |
- |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
CAGGAGAATGGCATGAACCCGGG |
PTPN4 |
ENSG00000088179 |
4.9253728466972815 |
[108,193] |
[3088,18] |
9 |
dCas9-VP64 |
positive selection |
2547672 |
119885862 |
119885885 |
2 |
+ |
27453484 |
HT29 |
resistance to T3SS1-dependent cytotoxicity |
AGTTGAATTCCACTATGCAAGGG |
PTPN4 |
ENSG00000088179 |
0.3672541433066896 |
[3,3] |
[4,3] |
7 |
hSpCas9 |
positive selection |
3014722 |
119882101 |
119882124 |
2 |
- |
27453484 |
HT29 |
resistance to T3SS1-dependent cytotoxicity |
GCAGCAGTATTAGAAGGACAGGG |
PTPN4 |
ENSG00000088179 |
0.743270245549517 |
[3,2] |
[4,4] |
9 |
hSpCas9 |
positive selection |
3014723 |
119932530 |
119932553 |
2 |
- |
27453484 |
HT29 |
resistance to T3SS1-dependent cytotoxicity |
TACTGATTAGGAGTTCCCGGTGG |
PTPN4 |
ENSG00000088179 |
0.432219517686234 |
[4,3] |
[3,5] |
8 |
hSpCas9 |
positive selection |
3014724 |
119809861 |
119809884 |
2 |
+ |
27453484 |
HT29 |
resistance to T3SS1-dependent cytotoxicity |
TCACGTTTCCGATTGCCTGCTGG |
PTPN4 |
ENSG00000088179 |
0.21709391507023926 |
[3,3] |
[3,3] |
4 |
hSpCas9 |
positive selection |
3014725 |
119885862 |
119885885 |
2 |
+ |
27453484 |
HT29 |
resistance to T3SS2-dependent cytotoxicity |
AGTTGAATTCCACTATGCAAGGG |
PTPN4 |
ENSG00000088179 |
-0.45964365250583367 |
[3,3] |
[1,1] |
-6 |
hSpCas9 |
positive selection |
3082580 |
119882101 |
119882124 |
2 |
- |
27453484 |
HT29 |
resistance to T3SS2-dependent cytotoxicity |
GCAGCAGTATTAGAAGGACAGGG |
PTPN4 |
ENSG00000088179 |
0.4890180540722025 |
[3,3] |
[3,2] |
8 |
hSpCas9 |
positive selection |
3082581 |
119932530 |
119932553 |
2 |
- |
27453484 |
HT29 |
resistance to T3SS2-dependent cytotoxicity |
TACTGATTAGGAGTTCCCGGTGG |
PTPN4 |
ENSG00000088179 |
-0.09283552919514379 |
[4,4] |
[3,1] |
-1 |
hSpCas9 |
positive selection |
3082582 |
119809861 |
119809884 |
2 |
+ |
27453484 |
HT29 |
resistance to T3SS2-dependent cytotoxicity |
TCACGTTTCCGATTGCCTGCTGG |
PTPN4 |
ENSG00000088179 |
0.4068973959275934 |
[3,3] |
[3,3] |
7 |
hSpCas9 |
positive selection |
3082583 |
119809858 |
119809881 |
|
- |
24336571 |
A375 |
resistance to PLX after 7 days |
AGCAGGCAATCGGAAACGTGAGG |
PTPN4 |
ENSG00000088179 |
-0.010872260197291594 |
[7,8] |
[6,9] |
0 |
hSpCas9 |
positive selection |
3138812 |
119809892 |
119809915 |
|
+ |
24336571 |
A375 |
resistance to PLX after 7 days |
CAATGTACGAGCATCAGAGTTGG |
PTPN4 |
ENSG00000088179 |
-0.0973777900265379 |
[17,22] |
[16,20] |
-3 |
hSpCas9 |
positive selection |
3138813 |
119862577 |
119862600 |
|
+ |
24336571 |
A375 |
resistance to PLX after 7 days |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
-0.1802776665945931 |
[8,8] |
[6,7] |
-6 |
hSpCas9 |
positive selection |
3138814 |
119809860 |
119809883 |
|
+ |
24336571 |
A375 |
resistance to PLX after 7 days |
TCACGTTTCCGATTGCCTGCTGG |
PTPN4 |
ENSG00000088179 |
-0.12937363628529241 |
[31,22] |
[23,25] |
-4 |
hSpCas9 |
positive selection |
3138815 |
119809858 |
119809881 |
|
- |
24336571 |
A375 |
resistance to PLX after 14 days |
AGCAGGCAATCGGAAACGTGAGG |
PTPN4 |
ENSG00000088179 |
-1.1206365316931177 |
[14,7] |
[1,1] |
-9 |
hSpCas9 |
positive selection |
3196605 |
119809892 |
119809915 |
|
+ |
24336571 |
A375 |
resistance to PLX after 14 days |
CAATGTACGAGCATCAGAGTTGG |
PTPN4 |
ENSG00000088179 |
0.7862603623734075 |
[12,15] |
[10,11] |
6 |
hSpCas9 |
positive selection |
3196606 |
119862577 |
119862600 |
|
+ |
24336571 |
A375 |
resistance to PLX after 14 days |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
-0.41264205866326376 |
[9,13] |
[3,3] |
-5 |
hSpCas9 |
positive selection |
3196607 |
119809860 |
119809883 |
|
+ |
24336571 |
A375 |
resistance to PLX after 14 days |
TCACGTTTCCGATTGCCTGCTGG |
PTPN4 |
ENSG00000088179 |
0.2442713651135845 |
[23,26] |
[10,16] |
2 |
hSpCas9 |
positive selection |
3196608 |
119809858 |
119809881 |
|
- |
24336571 |
A375 |
viability after 7 days |
AGCAGGCAATCGGAAACGTGAGG |
PTPN4 |
ENSG00000088179 |
-0.1258259829036163 |
[9] |
[7,8] |
-2 |
hSpCas9 |
negative selection |
3254398 |
119809892 |
119809915 |
|
+ |
24336571 |
A375 |
viability after 7 days |
CAATGTACGAGCATCAGAGTTGG |
PTPN4 |
ENSG00000088179 |
-0.3091196740227339 |
[26] |
[17,22] |
-4 |
hSpCas9 |
negative selection |
3254399 |
119862577 |
119862600 |
|
+ |
24336571 |
A375 |
viability after 7 days |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
-0.3343595096178149 |
[11] |
[8,8] |
-5 |
hSpCas9 |
negative selection |
3254400 |
119809860 |
119809883 |
|
+ |
24336571 |
A375 |
viability after 7 days |
TCACGTTTCCGATTGCCTGCTGG |
PTPN4 |
ENSG00000088179 |
0.3520992582348529 |
[21] |
[31,22] |
5 |
hSpCas9 |
negative selection |
3254401 |
119809858 |
119809881 |
|
- |
24336571 |
A375 |
viability after 14 days |
AGCAGGCAATCGGAAACGTGAGG |
PTPN4 |
ENSG00000088179 |
0.31160012576280277 |
[9] |
[14,7] |
4 |
hSpCas9 |
negative selection |
3312191 |
119809892 |
119809915 |
|
+ |
24336571 |
A375 |
viability after 14 days |
CAATGTACGAGCATCAGAGTTGG |
PTPN4 |
ENSG00000088179 |
-0.7706172957183803 |
[26] |
[12,15] |
-7 |
hSpCas9 |
negative selection |
3312192 |
119862577 |
119862600 |
|
+ |
24336571 |
A375 |
viability after 14 days |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
0.0959306197181887 |
[11] |
[9,13] |
1 |
hSpCas9 |
negative selection |
3312193 |
119809860 |
119809883 |
|
+ |
24336571 |
A375 |
viability after 14 days |
TCACGTTTCCGATTGCCTGCTGG |
PTPN4 |
ENSG00000088179 |
0.2765501373530974 |
[21] |
[23,26] |
3 |
hSpCas9 |
negative selection |
3312194 |
119877330 |
119877353 |
2 |
+ |
27383988 |
293T |
resistance to West Nile virus (flavivirus) |
TGGATCCAAACAAACCAATAAGG |
PTPN4 |
ENSG00000088179 |
0.4371472490306473 |
[112,112] |
[0,0] |
2 |
hSpCas9 |
positive selection |
3388273 |
119862630 |
119862653 |
2 |
- |
27383988 |
293T |
resistance to West Nile virus (flavivirus) |
TACACTTACTGGGTTATCTGTGG |
PTPN4 |
ENSG00000088179 |
0.06750165256581787 |
[145,145] |
[0,0] |
0 |
hSpCas9 |
positive selection |
3388274 |
119877344 |
119877367 |
2 |
- |
27383988 |
293T |
resistance to West Nile virus (flavivirus) |
CTCTTTAGCTGCTTCCTTATTGG |
PTPN4 |
ENSG00000088179 |
-1.0691032756764678 |
[320,320] |
[0,0] |
-7 |
hSpCas9 |
positive selection |
3388275 |
119885861 |
119885884 |
2 |
+ |
26780180 |
HT29 |
viability (Avana library 4 designs) |
AGTTGAATTCCACTATGCAAGGG |
PTPN4 |
ENSG00000088179 |
1.29894013917359 |
[] |
[] |
5 |
hSpCas9 |
negative selection |
3452972 |
119882101 |
119882124 |
2 |
- |
26780180 |
HT29 |
viability (Avana library 4 designs) |
GCAGCAGTATTAGAAGGACAGGG |
PTPN4 |
ENSG00000088179 |
-0.301183138815123 |
[] |
[] |
-5 |
hSpCas9 |
negative selection |
3452973 |
119932530 |
119932553 |
2 |
- |
26780180 |
HT29 |
viability (Avana library 4 designs) |
TACTGATTAGGAGTTCCCGGTGG |
PTPN4 |
ENSG00000088179 |
-0.0702721301330213 |
[] |
[] |
-1 |
hSpCas9 |
negative selection |
3452974 |
119809860 |
119809883 |
2 |
+ |
26780180 |
HT29 |
viability (Avana library 4 designs) |
TCACGTTTCCGATTGCCTGCTGG |
PTPN4 |
ENSG00000088179 |
1.25259472731537 |
[] |
[] |
5 |
hSpCas9 |
negative selection |
3452975 |
119882101 |
119882124 |
2 |
- |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
GCAGCAGTATTAGAAGGACAGGG |
PTPN4 |
ENSG00000088179 |
3.5927843414972 |
[] |
[] |
6 |
hSpCas9 |
negative selection |
3549605 |
119932530 |
119932553 |
2 |
- |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
TACTGATTAGGAGTTCCCGGTGG |
PTPN4 |
ENSG00000088179 |
-0.523203738220889 |
[] |
[] |
0 |
hSpCas9 |
negative selection |
3549606 |
119885861 |
119885884 |
2 |
+ |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
AGTTGAATTCCACTATGCAAGGG |
PTPN4 |
ENSG00000088179 |
-5.13026007710618 |
[] |
[] |
-5 |
hSpCas9 |
negative selection |
3549607 |
119809860 |
119809883 |
2 |
+ |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
TCACGTTTCCGATTGCCTGCTGG |
PTPN4 |
ENSG00000088179 |
0.722200883603216 |
[] |
[] |
1 |
hSpCas9 |
negative selection |
3549608 |
119932518 |
119932541 |
2 |
- |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
GTTCCCGGTGGAGATCGTGATGG |
PTPN4 |
ENSG00000088179 |
2.67155691918917 |
[] |
[] |
4 |
hSpCas9 |
negative selection |
3549609 |
119926634 |
119926657 |
2 |
+ |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
AGAAAAGGCAAATAAAGACAGGG |
PTPN4 |
ENSG00000088179 |
-6.97032587026405 |
[] |
[] |
-6 |
hSpCas9 |
negative selection |
3549610 |
119882101 |
119882124 |
2 |
- |
26780180 |
A375 |
viability (Avana lentiGuide) |
GCAGCAGTATTAGAAGGACAGGG |
PTPN4 |
ENSG00000088179 |
-2.55974788895165 |
[] |
[] |
-4 |
hSpCas9 |
negative selection |
3658264 |
119932530 |
119932553 |
2 |
- |
26780180 |
A375 |
viability (Avana lentiGuide) |
TACTGATTAGGAGTTCCCGGTGG |
PTPN4 |
ENSG00000088179 |
-1.39953325038562 |
[] |
[] |
-2 |
hSpCas9 |
negative selection |
3658265 |
119885861 |
119885884 |
2 |
+ |
26780180 |
A375 |
viability (Avana lentiGuide) |
AGTTGAATTCCACTATGCAAGGG |
PTPN4 |
ENSG00000088179 |
-0.866066052311467 |
[] |
[] |
-1 |
hSpCas9 |
negative selection |
3658266 |
119809860 |
119809883 |
2 |
+ |
26780180 |
A375 |
viability (Avana lentiGuide) |
TCACGTTTCCGATTGCCTGCTGG |
PTPN4 |
ENSG00000088179 |
-1.19810900913312 |
[] |
[] |
-2 |
hSpCas9 |
negative selection |
3658267 |
119932518 |
119932541 |
2 |
- |
26780180 |
A375 |
viability (Avana lentiGuide) |
GTTCCCGGTGGAGATCGTGATGG |
PTPN4 |
ENSG00000088179 |
1.90976753473073 |
[] |
[] |
2 |
hSpCas9 |
negative selection |
3658268 |
119926634 |
119926657 |
2 |
+ |
26780180 |
A375 |
viability (Avana lentiGuide) |
AGAAAAGGCAAATAAAGACAGGG |
PTPN4 |
ENSG00000088179 |
0.77814039515178 |
[] |
[] |
0 |
hSpCas9 |
negative selection |
3658269 |
119882101 |
119882124 |
2 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
GCAGCAGTATTAGAAGGACAGGG |
PTPN4 |
ENSG00000088179 |
0.14071075425057544 |
[4] |
[5,4] |
4 |
hSpCas9 |
positive selection |
3766871 |
119932530 |
119932553 |
2 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
TACTGATTAGGAGTTCCCGGTGG |
PTPN4 |
ENSG00000088179 |
-0.19758717697735423 |
[5] |
[5,3] |
-3 |
hSpCas9 |
positive selection |
3766872 |
119885861 |
119885884 |
2 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
AGTTGAATTCCACTATGCAAGGG |
PTPN4 |
ENSG00000088179 |
-0.613099460974311 |
[6] |
[4,2] |
-7 |
hSpCas9 |
positive selection |
3766873 |
119809860 |
119809883 |
2 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
TCACGTTTCCGATTGCCTGCTGG |
PTPN4 |
ENSG00000088179 |
0.045486067051915144 |
[5] |
[5,4] |
1 |
hSpCas9 |
positive selection |
3766874 |
119932518 |
119932541 |
2 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
GTTCCCGGTGGAGATCGTGATGG |
PTPN4 |
ENSG00000088179 |
0.11698269593307778 |
[5] |
[5,5] |
3 |
hSpCas9 |
positive selection |
3766875 |
119926634 |
119926657 |
2 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
AGAAAAGGCAAATAAAGACAGGG |
PTPN4 |
ENSG00000088179 |
-0.6038770608296415 |
[6] |
[3,3] |
-7 |
hSpCas9 |
positive selection |
3766876 |
119882101 |
119882124 |
2 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
GCAGCAGTATTAGAAGGACAGGG |
PTPN4 |
ENSG00000088179 |
-0.14510993034369557 |
[4] |
[2,4] |
-2 |
hSpCas9 |
positive selection |
3875478 |
119932530 |
119932553 |
2 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
TACTGATTAGGAGTTCCCGGTGG |
PTPN4 |
ENSG00000088179 |
0.010358297862200452 |
[5] |
[4,4] |
0 |
hSpCas9 |
positive selection |
3875479 |
119885861 |
119885884 |
2 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
AGTTGAATTCCACTATGCAAGGG |
PTPN4 |
ENSG00000088179 |
-0.16534756455964822 |
[5] |
[4,2] |
-2 |
hSpCas9 |
positive selection |
3875480 |
119809860 |
119809883 |
2 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
TCACGTTTCCGATTGCCTGCTGG |
PTPN4 |
ENSG00000088179 |
0.3516534791536107 |
[5] |
[6,6] |
9 |
hSpCas9 |
positive selection |
3875481 |
119932518 |
119932541 |
2 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
GTTCCCGGTGGAGATCGTGATGG |
PTPN4 |
ENSG00000088179 |
0.12732203398570047 |
[4] |
[3,5] |
3 |
hSpCas9 |
positive selection |
3875482 |
119926634 |
119926657 |
2 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
AGAAAAGGCAAATAAAGACAGGG |
PTPN4 |
ENSG00000088179 |
0.03424735393059894 |
[5] |
[5,2] |
0 |
hSpCas9 |
positive selection |
3875483 |
119809858 |
119809881 |
2 |
- |
26780180 |
A375 |
viability |
AGCAGGCAATCGGAAACGTGAGG |
PTPN4 |
ENSG00000088179 |
1.11592682967745 |
[] |
[] |
5 |
hSpCas9 |
negative selection |
3985886 |
119809892 |
119809915 |
2 |
+ |
26780180 |
A375 |
viability |
CAATGTACGAGCATCAGAGTTGG |
PTPN4 |
ENSG00000088179 |
1.3645571510318 |
[] |
[] |
7 |
hSpCas9 |
negative selection |
3985887 |
119877344 |
119877367 |
2 |
- |
26780180 |
A375 |
viability |
CTCTTTAGCTGCTTCCTTATTGG |
PTPN4 |
ENSG00000088179 |
-0.238884733001307 |
[] |
[] |
-6 |
hSpCas9 |
negative selection |
3985888 |
119862577 |
119862600 |
2 |
+ |
26780180 |
A375 |
viability |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
0.646365156245952 |
[] |
[] |
2 |
hSpCas9 |
negative selection |
3985889 |
119862630 |
119862653 |
2 |
- |
26780180 |
A375 |
viability |
TACACTTACTGGGTTATCTGTGG |
PTPN4 |
ENSG00000088179 |
0.640539442162488 |
[] |
[] |
2 |
hSpCas9 |
negative selection |
3985890 |
119877330 |
119877353 |
2 |
+ |
26780180 |
A375 |
viability |
TGGATCCAAACAAACCAATAAGG |
PTPN4 |
ENSG00000088179 |
0.781680292100378 |
[] |
[] |
3 |
hSpCas9 |
negative selection |
3985891 |
119809858 |
119809881 |
2 |
- |
26780180 |
HT29 |
viability (GeCKOv2 library) |
AGCAGGCAATCGGAAACGTGAGG |
PTPN4 |
ENSG00000088179 |
0.0818414886783936 |
[] |
[] |
0 |
hSpCas9 |
negative selection |
4093852 |
119809892 |
119809915 |
2 |
+ |
26780180 |
HT29 |
viability (GeCKOv2 library) |
CAATGTACGAGCATCAGAGTTGG |
PTPN4 |
ENSG00000088179 |
1.05939272395018 |
[] |
[] |
5 |
hSpCas9 |
negative selection |
4093853 |
119877344 |
119877367 |
2 |
- |
26780180 |
HT29 |
viability (GeCKOv2 library) |
CTCTTTAGCTGCTTCCTTATTGG |
PTPN4 |
ENSG00000088179 |
0.530111244757379 |
[] |
[] |
1 |
hSpCas9 |
negative selection |
4093854 |
119862577 |
119862600 |
2 |
+ |
26780180 |
HT29 |
viability (GeCKOv2 library) |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
1.01402315981153 |
[] |
[] |
4 |
hSpCas9 |
negative selection |
4093855 |
119862630 |
119862653 |
2 |
- |
26780180 |
HT29 |
viability (GeCKOv2 library) |
TACACTTACTGGGTTATCTGTGG |
PTPN4 |
ENSG00000088179 |
1.2951035295971 |
[] |
[] |
6 |
hSpCas9 |
negative selection |
4093856 |
119877330 |
119877353 |
2 |
+ |
26780180 |
HT29 |
viability (GeCKOv2 library) |
TGGATCCAAACAAACCAATAAGG |
PTPN4 |
ENSG00000088179 |
1.49926069452845 |
[] |
[] |
7 |
hSpCas9 |
negative selection |
4093857 |
119809858 |
119809881 |
2 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiCRISPRv1) |
AGCAGGCAATCGGAAACGTGAGG |
PTPN4 |
ENSG00000088179 |
-0.484523228514738 |
[2] |
[1,0] |
-8 |
hSpCas9 |
positive selection |
4164099 |
119809892 |
119809915 |
2 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiCRISPRv1) |
CAATGTACGAGCATCAGAGTTGG |
PTPN4 |
ENSG00000088179 |
0.29902025461140075 |
[3] |
[3,3] |
7 |
hSpCas9 |
positive selection |
4164100 |
119862577 |
119862600 |
2 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiCRISPRv1) |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
0.3658155799126896 |
[2] |
[1,1] |
8 |
hSpCas9 |
positive selection |
4164101 |
119809860 |
119809883 |
2 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiCRISPRv1) |
TCACGTTTCCGATTGCCTGCTGG |
PTPN4 |
ENSG00000088179 |
0.08969914312666272 |
[4] |
[2,3] |
2 |
hSpCas9 |
positive selection |
4164102 |
119809858 |
119809881 |
2 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiGuide) |
AGCAGGCAATCGGAAACGTGAGG |
PTPN4 |
ENSG00000088179 |
-0.11375132741287941 |
[2] |
[2,0,1,0] |
-2 |
hSpCas9 |
positive selection |
4228121 |
119809892 |
119809915 |
2 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiGuide) |
CAATGTACGAGCATCAGAGTTGG |
PTPN4 |
ENSG00000088179 |
0.6261931608944751 |
[5] |
[3,3,2,3] |
4 |
hSpCas9 |
positive selection |
4228122 |
119862577 |
119862600 |
2 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiGuide) |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
0.4268941054800634 |
[3] |
[4,0,5,0] |
3 |
hSpCas9 |
positive selection |
4228123 |
119809860 |
119809883 |
2 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiGuide) |
TCACGTTTCCGATTGCCTGCTGG |
PTPN4 |
ENSG00000088179 |
0.12904479043231165 |
[4] |
[1,4,3,0] |
1 |
hSpCas9 |
positive selection |
4228124 |
119809858 |
119809881 |
2 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
AGCAGGCAATCGGAAACGTGAGG |
PTPN4 |
ENSG00000088179 |
0.2316558007702666 |
[4] |
[4,3] |
4 |
hSpCas9 |
positive selection |
4293101 |
119809892 |
119809915 |
2 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
CAATGTACGAGCATCAGAGTTGG |
PTPN4 |
ENSG00000088179 |
-0.44208298851623895 |
[3] |
[3,0] |
-7 |
hSpCas9 |
positive selection |
4293102 |
119862577 |
119862600 |
2 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
-0.3825854726928404 |
[0] |
[0,0] |
-7 |
hSpCas9 |
positive selection |
4293103 |
119877330 |
119877353 |
2 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
TGGATCCAAACAAACCAATAAGG |
PTPN4 |
ENSG00000088179 |
0.30573541723833597 |
[2] |
[2,1] |
6 |
hSpCas9 |
positive selection |
4357359 |
119862630 |
119862653 |
2 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
TACACTTACTGGGTTATCTGTGG |
PTPN4 |
ENSG00000088179 |
0.042837635029138475 |
[2] |
[3,1] |
0 |
hSpCas9 |
positive selection |
4357360 |
119877344 |
119877367 |
2 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
CTCTTTAGCTGCTTCCTTATTGG |
PTPN4 |
ENSG00000088179 |
0.5772099007030655 |
[3] |
[3,4] |
9 |
hSpCas9 |
positive selection |
4357361 |
119920221 |
119920243 |
2 |
+ |
27760321 |
OCIAML3 |
viability |
AGGTTCAAAATTCCGGTACTGG |
PTPN4 |
ENSG00000088179 |
-0.32353882418544877 |
[325,268] |
[178,192] |
-3 |
hSpCas9 |
negative selection |
4431914 |
119932437 |
119932459 |
2 |
- |
27760321 |
OCIAML3 |
viability |
CCATTAATTTCCGTGCCAAGGG |
PTPN4 |
ENSG00000088179 |
0.024065177423125028 |
[554,501] |
[323,544] |
0 |
hSpCas9 |
negative selection |
4431915 |
119932530 |
119932552 |
2 |
- |
27760321 |
OCIAML3 |
viability |
ACTGATTAGGAGTTCCCGGTGG |
PTPN4 |
ENSG00000088179 |
0.8091236113170499 |
[619,529] |
[804,759] |
8 |
hSpCas9 |
negative selection |
4431916 |
119934801 |
119934823 |
2 |
+ |
27760321 |
OCIAML3 |
viability |
CGAAATTCTACATTCACGCAGG |
PTPN4 |
ENSG00000088179 |
-0.20225476140986703 |
[714,579] |
[472,391] |
-2 |
hSpCas9 |
negative selection |
4431917 |
119934829 |
119934851 |
2 |
- |
27760321 |
OCIAML3 |
viability |
ACTGAAGATGGTCGTAACCGGG |
PTPN4 |
ENSG00000088179 |
0.31603089631615633 |
[273,219] |
[229,250] |
3 |
hSpCas9 |
negative selection |
4431918 |
119920221 |
119920243 |
2 |
+ |
27760321 |
OCIAML2 |
viability |
AGGTTCAAAATTCCGGTACTGG |
PTPN4 |
ENSG00000088179 |
0.18125596563794255 |
[325,268] |
[199,365] |
2 |
hSpCas9 |
negative selection |
4515377 |
119932437 |
119932459 |
2 |
- |
27760321 |
OCIAML2 |
viability |
CCATTAATTTCCGTGCCAAGGG |
PTPN4 |
ENSG00000088179 |
0.3293604169890139 |
[554,501] |
[512,567] |
4 |
hSpCas9 |
negative selection |
4515378 |
119932530 |
119932552 |
2 |
- |
27760321 |
OCIAML2 |
viability |
ACTGATTAGGAGTTCCCGGTGG |
PTPN4 |
ENSG00000088179 |
0.26318491823199125 |
[619,529] |
[401,759] |
3 |
hSpCas9 |
negative selection |
4515379 |
119934801 |
119934823 |
2 |
+ |
27760321 |
OCIAML2 |
viability |
CGAAATTCTACATTCACGCAGG |
PTPN4 |
ENSG00000088179 |
-0.11874991734753099 |
[714,579] |
[456,509] |
-1 |
hSpCas9 |
negative selection |
4515380 |
119934829 |
119934851 |
2 |
- |
27760321 |
OCIAML2 |
viability |
ACTGAAGATGGTCGTAACCGGG |
PTPN4 |
ENSG00000088179 |
-0.43196468692586554 |
[273,219] |
[107,198] |
-5 |
hSpCas9 |
negative selection |
4515381 |
119920221 |
119920243 |
2 |
+ |
27760321 |
MV411 |
viability |
AGGTTCAAAATTCCGGTACTGG |
PTPN4 |
ENSG00000088179 |
-0.48155499550062264 |
[325,268] |
[93,208] |
-3 |
hSpCas9 |
negative selection |
4598840 |
119932437 |
119932459 |
2 |
- |
27760321 |
MV411 |
viability |
CCATTAATTTCCGTGCCAAGGG |
PTPN4 |
ENSG00000088179 |
0.8097370555299053 |
[554,501] |
[400,925] |
6 |
hSpCas9 |
negative selection |
4598841 |
119932530 |
119932552 |
2 |
- |
27760321 |
MV411 |
viability |
ACTGATTAGGAGTTCCCGGTGG |
PTPN4 |
ENSG00000088179 |
0.1927317219935813 |
[619,529] |
[568,226] |
1 |
hSpCas9 |
negative selection |
4598842 |
119934801 |
119934823 |
2 |
+ |
27760321 |
MV411 |
viability |
CGAAATTCTACATTCACGCAGG |
PTPN4 |
ENSG00000088179 |
0.8202831308534999 |
[714,579] |
[873,564] |
6 |
hSpCas9 |
negative selection |
4598843 |
119934829 |
119934851 |
2 |
- |
27760321 |
MV411 |
viability |
ACTGAAGATGGTCGTAACCGGG |
PTPN4 |
ENSG00000088179 |
0.027342804948943367 |
[273,219] |
[127,220] |
0 |
hSpCas9 |
negative selection |
4598844 |
119920221 |
119920243 |
2 |
+ |
27760321 |
HL60 |
viability |
AGGTTCAAAATTCCGGTACTGG |
PTPN4 |
ENSG00000088179 |
0.23701128399876165 |
[325,268] |
[304,263] |
3 |
hSpCas9 |
negative selection |
4682303 |
119932437 |
119932459 |
2 |
- |
27760321 |
HL60 |
viability |
CCATTAATTTCCGTGCCAAGGG |
PTPN4 |
ENSG00000088179 |
0.19359915859032095 |
[554,501] |
[486,499] |
2 |
hSpCas9 |
negative selection |
4682304 |
119932530 |
119932552 |
2 |
- |
27760321 |
HL60 |
viability |
ACTGATTAGGAGTTCCCGGTGG |
PTPN4 |
ENSG00000088179 |
0.34642411220067776 |
[619,529] |
[472,724] |
4 |
hSpCas9 |
negative selection |
4682305 |
119934801 |
119934823 |
2 |
+ |
27760321 |
HL60 |
viability |
CGAAATTCTACATTCACGCAGG |
PTPN4 |
ENSG00000088179 |
-0.5396709797387762 |
[714,579] |
[326,398] |
-5 |
hSpCas9 |
negative selection |
4682306 |
119934829 |
119934851 |
2 |
- |
27760321 |
HL60 |
viability |
ACTGAAGATGGTCGTAACCGGG |
PTPN4 |
ENSG00000088179 |
0.03626675400453816 |
[273,219] |
[262,144] |
0 |
hSpCas9 |
negative selection |
4682307 |
119920221 |
119920243 |
2 |
+ |
27760321 |
HT1080 |
viability |
AGGTTCAAAATTCCGGTACTGG |
PTPN4 |
ENSG00000088179 |
1.8437617845843235 |
[268,209] |
[362,319] |
8 |
hSpCas9 |
negative selection |
4765766 |
119932437 |
119932459 |
2 |
- |
27760321 |
HT1080 |
viability |
CCATTAATTTCCGTGCCAAGGG |
PTPN4 |
ENSG00000088179 |
0.44665045416085375 |
[501,391] |
[151,341] |
2 |
hSpCas9 |
negative selection |
4765767 |
119932530 |
119932552 |
2 |
- |
27760321 |
HT1080 |
viability |
ACTGATTAGGAGTTCCCGGTGG |
PTPN4 |
ENSG00000088179 |
-0.6163166589567545 |
[529,413] |
[83,164] |
-3 |
hSpCas9 |
negative selection |
4765768 |
119934801 |
119934823 |
2 |
+ |
27760321 |
HT1080 |
viability |
CGAAATTCTACATTCACGCAGG |
PTPN4 |
ENSG00000088179 |
0.4416248440701408 |
[579,452] |
[246,314] |
2 |
hSpCas9 |
negative selection |
4765769 |
119934829 |
119934851 |
2 |
- |
27760321 |
HT1080 |
viability |
ACTGAAGATGGTCGTAACCGGG |
PTPN4 |
ENSG00000088179 |
-0.32912658579272536 |
[219,171] |
[54,69] |
-1 |
hSpCas9 |
negative selection |
4765770 |
119920221 |
119920243 |
2 |
+ |
27760321 |
HT29 |
viability after 7 days |
AGGTTCAAAATTCCGGTACTGG |
PTPN4 |
ENSG00000088179 |
0.0722819445490187 |
[268,209] |
[479,345,171] |
1 |
hSpCas9 |
negative selection |
4849229 |
119932437 |
119932459 |
2 |
- |
27760321 |
HT29 |
viability after 7 days |
CCATTAATTTCCGTGCCAAGGG |
PTPN4 |
ENSG00000088179 |
0.004368647831563766 |
[501,391] |
[762,536,458] |
0 |
hSpCas9 |
negative selection |
4849230 |
119932530 |
119932552 |
2 |
- |
27760321 |
HT29 |
viability after 7 days |
ACTGATTAGGAGTTCCCGGTGG |
PTPN4 |
ENSG00000088179 |
-0.019466451128438866 |
[529,413] |
[784,407,627] |
0 |
hSpCas9 |
negative selection |
4849231 |
119934801 |
119934823 |
2 |
+ |
27760321 |
HT29 |
viability after 7 days |
CGAAATTCTACATTCACGCAGG |
PTPN4 |
ENSG00000088179 |
-0.7988781293983052 |
[579,452] |
[462,463,233] |
-8 |
hSpCas9 |
negative selection |
4849232 |
119934829 |
119934851 |
2 |
- |
27760321 |
HT29 |
viability after 7 days |
ACTGAAGATGGTCGTAACCGGG |
PTPN4 |
ENSG00000088179 |
-0.7874759101508405 |
[219,171] |
[226,127,95] |
-8 |
hSpCas9 |
negative selection |
4849233 |
119920221 |
119920243 |
2 |
+ |
27760321 |
HT29 |
viability after 25 days |
AGGTTCAAAATTCCGGTACTGG |
PTPN4 |
ENSG00000088179 |
-0.01982157647879501 |
[268,209] |
[191,269,361] |
0 |
hSpCas9 |
negative selection |
4932692 |
119932437 |
119932459 |
2 |
- |
27760321 |
HT29 |
viability after 25 days |
CCATTAATTTCCGTGCCAAGGG |
PTPN4 |
ENSG00000088179 |
0.33445623260197893 |
[501,391] |
[626,665,638] |
3 |
hSpCas9 |
negative selection |
4932693 |
119932530 |
119932552 |
2 |
- |
27760321 |
HT29 |
viability after 25 days |
ACTGATTAGGAGTTCCCGGTGG |
PTPN4 |
ENSG00000088179 |
0.16758727364726161 |
[529,413] |
[595,566,659] |
1 |
hSpCas9 |
negative selection |
4932694 |
119934801 |
119934823 |
2 |
+ |
27760321 |
HT29 |
viability after 25 days |
CGAAATTCTACATTCACGCAGG |
PTPN4 |
ENSG00000088179 |
-0.09265713447586582 |
[579,452] |
[520,560,582] |
-1 |
hSpCas9 |
negative selection |
4932695 |
119934829 |
119934851 |
2 |
- |
27760321 |
HT29 |
viability after 25 days |
ACTGAAGATGGTCGTAACCGGG |
PTPN4 |
ENSG00000088179 |
-0.4864187214956496 |
[219,171] |
[130,166,185] |
-4 |
hSpCas9 |
negative selection |
4932696 |
119920221 |
119920243 |
2 |
+ |
27760321 |
HT29 |
viability after 22 days |
AGGTTCAAAATTCCGGTACTGG |
PTPN4 |
ENSG00000088179 |
-0.042840549490301805 |
[268,209] |
[332,263,206] |
0 |
hSpCas9 |
negative selection |
5016155 |
119932437 |
119932459 |
2 |
- |
27760321 |
HT29 |
viability after 22 days |
CCATTAATTTCCGTGCCAAGGG |
PTPN4 |
ENSG00000088179 |
0.1988103704887157 |
[501,391] |
[584,660,532] |
2 |
hSpCas9 |
negative selection |
5016156 |
119932530 |
119932552 |
2 |
- |
27760321 |
HT29 |
viability after 22 days |
ACTGATTAGGAGTTCCCGGTGG |
PTPN4 |
ENSG00000088179 |
0.13611940640547165 |
[529,413] |
[746,450,596] |
1 |
hSpCas9 |
negative selection |
5016157 |
119934801 |
119934823 |
2 |
+ |
27760321 |
HT29 |
viability after 22 days |
CGAAATTCTACATTCACGCAGG |
PTPN4 |
ENSG00000088179 |
-0.2670688036694198 |
[579,452] |
[400,614,474] |
-3 |
hSpCas9 |
negative selection |
5016158 |
119934829 |
119934851 |
2 |
- |
27760321 |
HT29 |
viability after 22 days |
ACTGAAGATGGTCGTAACCGGG |
PTPN4 |
ENSG00000088179 |
-0.62790244422187 |
[219,171] |
[77,193,169] |
-5 |
hSpCas9 |
negative selection |
5016159 |
119920221 |
119920243 |
2 |
+ |
27760321 |
HT29 |
viability after 19 days |
AGGTTCAAAATTCCGGTACTGG |
PTPN4 |
ENSG00000088179 |
-0.1354066209791447 |
[268,209] |
[303,208,240] |
-1 |
hSpCas9 |
negative selection |
5099618 |
119932437 |
119932459 |
2 |
- |
27760321 |
HT29 |
viability after 19 days |
CCATTAATTTCCGTGCCAAGGG |
PTPN4 |
ENSG00000088179 |
0.6836181407902613 |
[501,391] |
[717,857,873] |
7 |
hSpCas9 |
negative selection |
5099619 |
119932530 |
119932552 |
2 |
- |
27760321 |
HT29 |
viability after 19 days |
ACTGATTAGGAGTTCCCGGTGG |
PTPN4 |
ENSG00000088179 |
-0.4775863687145264 |
[529,413] |
[415,527,227] |
-4 |
hSpCas9 |
negative selection |
5099620 |
119934801 |
119934823 |
2 |
+ |
27760321 |
HT29 |
viability after 19 days |
CGAAATTCTACATTCACGCAGG |
PTPN4 |
ENSG00000088179 |
-0.4682002646804547 |
[579,452] |
[426,271,575] |
-4 |
hSpCas9 |
negative selection |
5099621 |
119934829 |
119934851 |
2 |
- |
27760321 |
HT29 |
viability after 19 days |
ACTGAAGATGGTCGTAACCGGG |
PTPN4 |
ENSG00000088179 |
-0.030234460876388702 |
[219,171] |
[424,89,166] |
0 |
hSpCas9 |
negative selection |
5099622 |
119920221 |
119920243 |
2 |
+ |
27760321 |
HT29 |
viability after 16 days |
AGGTTCAAAATTCCGGTACTGG |
PTPN4 |
ENSG00000088179 |
0.25160218244527033 |
[268,209] |
[430,263,273] |
2 |
hSpCas9 |
negative selection |
5183081 |
119932437 |
119932459 |
2 |
- |
27760321 |
HT29 |
viability after 16 days |
CCATTAATTTCCGTGCCAAGGG |
PTPN4 |
ENSG00000088179 |
0.331410683279078 |
[501,391] |
[879,644,385] |
3 |
hSpCas9 |
negative selection |
5183082 |
119932530 |
119932552 |
2 |
- |
27760321 |
HT29 |
viability after 16 days |
ACTGATTAGGAGTTCCCGGTGG |
PTPN4 |
ENSG00000088179 |
0.33783298320842564 |
[529,413] |
[553,648,788] |
4 |
hSpCas9 |
negative selection |
5183083 |
119934801 |
119934823 |
2 |
+ |
27760321 |
HT29 |
viability after 16 days |
CGAAATTCTACATTCACGCAGG |
PTPN4 |
ENSG00000088179 |
-0.2515498597517807 |
[579,452] |
[583,542,336] |
-3 |
hSpCas9 |
negative selection |
5183084 |
119934829 |
119934851 |
2 |
- |
27760321 |
HT29 |
viability after 16 days |
ACTGAAGATGGTCGTAACCGGG |
PTPN4 |
ENSG00000088179 |
-0.44798864198247046 |
[219,171] |
[158,164,157] |
-4 |
hSpCas9 |
negative selection |
5183085 |
119920221 |
119920243 |
2 |
+ |
27760321 |
HT29 |
viability after 13 days |
AGGTTCAAAATTCCGGTACTGG |
PTPN4 |
ENSG00000088179 |
-0.6239409410989157 |
[268,209] |
[98,260,180] |
-6 |
hSpCas9 |
negative selection |
5266544 |
119932437 |
119932459 |
2 |
- |
27760321 |
HT29 |
viability after 13 days |
CCATTAATTTCCGTGCCAAGGG |
PTPN4 |
ENSG00000088179 |
0.5436885879102038 |
[501,391] |
[1100,684,496] |
7 |
hSpCas9 |
negative selection |
5266545 |
119932530 |
119932552 |
2 |
- |
27760321 |
HT29 |
viability after 13 days |
ACTGATTAGGAGTTCCCGGTGG |
PTPN4 |
ENSG00000088179 |
0.04748157182942769 |
[529,413] |
[760,400,536] |
0 |
hSpCas9 |
negative selection |
5266546 |
119934801 |
119934823 |
2 |
+ |
27760321 |
HT29 |
viability after 13 days |
CGAAATTCTACATTCACGCAGG |
PTPN4 |
ENSG00000088179 |
-0.5565460233077287 |
[579,452] |
[238,599,384] |
-6 |
hSpCas9 |
negative selection |
5266547 |
119934829 |
119934851 |
2 |
- |
27760321 |
HT29 |
viability after 13 days |
ACTGAAGATGGTCGTAACCGGG |
PTPN4 |
ENSG00000088179 |
-0.25631936295372737 |
[219,171] |
[69,303,196] |
-3 |
hSpCas9 |
negative selection |
5266548 |
119920221 |
119920243 |
2 |
+ |
27760321 |
HT29 |
viability after 10 days |
AGGTTCAAAATTCCGGTACTGG |
PTPN4 |
ENSG00000088179 |
-0.6594542386787118 |
[268,209] |
[297,181,89] |
-6 |
hSpCas9 |
negative selection |
5350007 |
119932437 |
119932459 |
2 |
- |
27760321 |
HT29 |
viability after 10 days |
CCATTAATTTCCGTGCCAAGGG |
PTPN4 |
ENSG00000088179 |
0.044152814267783336 |
[501,391] |
[584,544,594] |
0 |
hSpCas9 |
negative selection |
5350008 |
119932530 |
119932552 |
2 |
- |
27760321 |
HT29 |
viability after 10 days |
ACTGATTAGGAGTTCCCGGTGG |
PTPN4 |
ENSG00000088179 |
0.13439523881993504 |
[529,413] |
[688,696,557] |
1 |
hSpCas9 |
negative selection |
5350009 |
119934801 |
119934823 |
2 |
+ |
27760321 |
HT29 |
viability after 10 days |
CGAAATTCTACATTCACGCAGG |
PTPN4 |
ENSG00000088179 |
-0.4748089378974016 |
[579,452] |
[467,580,348] |
-5 |
hSpCas9 |
negative selection |
5350010 |
119934829 |
119934851 |
2 |
- |
27760321 |
HT29 |
viability after 10 days |
ACTGAAGATGGTCGTAACCGGG |
PTPN4 |
ENSG00000088179 |
-0.06368646254127786 |
[219,171] |
[136,287,277] |
-1 |
hSpCas9 |
negative selection |
5350011 |
119920221 |
119920243 |
2 |
+ |
27760321 |
MOLM13 |
viability |
AGGTTCAAAATTCCGGTACTGG |
PTPN4 |
ENSG00000088179 |
0.532258816078681 |
[325,268] |
[212,265] |
3 |
hSpCas9 |
negative selection |
5433470 |
119932437 |
119932459 |
2 |
- |
27760321 |
MOLM13 |
viability |
CCATTAATTTCCGTGCCAAGGG |
PTPN4 |
ENSG00000088179 |
0.2148331712777421 |
[554,501] |
[321,365] |
1 |
hSpCas9 |
negative selection |
5433471 |
119932530 |
119932552 |
2 |
- |
27760321 |
MOLM13 |
viability |
ACTGATTAGGAGTTCCCGGTGG |
PTPN4 |
ENSG00000088179 |
0.7932391633580189 |
[619,529] |
[668,467] |
5 |
hSpCas9 |
negative selection |
5433472 |
119934801 |
119934823 |
2 |
+ |
27760321 |
MOLM13 |
viability |
CGAAATTCTACATTCACGCAGG |
PTPN4 |
ENSG00000088179 |
0.39923431993847003 |
[714,579] |
[744,252] |
2 |
hSpCas9 |
negative selection |
5433473 |
119934829 |
119934851 |
2 |
- |
27760321 |
MOLM13 |
viability |
ACTGAAGATGGTCGTAACCGGG |
PTPN4 |
ENSG00000088179 |
-1.3303573524578454 |
[273,219] |
[46,61] |
-6 |
hSpCas9 |
negative selection |
5433474 |
119760277 |
119760300 |
2 |
+ |
27661255 |
K562 |
viability |
GCTGAGGTAGCCCCCCGGAGCGG |
PTPN4 |
ENSG00000088179 |
0.040054377710807956 |
[707,808] |
[682,568] |
1 |
dCas9-KRAB |
negative selection |
5505251 |
119760363 |
119760386 |
2 |
+ |
27661255 |
K562 |
viability |
GACGCGGCTGTGATATACGAAGG |
PTPN4 |
ENSG00000088179 |
0.03700552163517737 |
[895,904] |
[813,672] |
1 |
dCas9-KRAB |
negative selection |
5505252 |
119759919 |
119759942 |
2 |
- |
27661255 |
K562 |
viability |
GTGAGCTGGCGGGTAATCCTGGG |
PTPN4 |
ENSG00000088179 |
0.08555253624091463 |
[1424,1650] |
[1331,1272] |
3 |
dCas9-KRAB |
negative selection |
5505253 |
119759933 |
119759956 |
2 |
- |
27661255 |
K562 |
viability |
GCGCACTGCGCGGCGTGAGCTGG |
PTPN4 |
ENSG00000088179 |
0.1710771909494203 |
[593,758] |
[615,596] |
6 |
dCas9-KRAB |
negative selection |
5505254 |
119759980 |
119760003 |
2 |
- |
27661255 |
K562 |
viability |
GAGTCCTGAGAGAACAATGTTGG |
PTPN4 |
ENSG00000088179 |
0.0161961798444179 |
[1164,947] |
[915,805] |
0 |
dCas9-KRAB |
negative selection |
5505255 |
119809858 |
119809881 |
2 |
- |
27260156 |
BXPC3 |
viability |
AGCAGGCAATCGGAAACGTGAGG |
PTPN4 |
ENSG00000088179 |
0.0462836069002206 |
[1078] |
[952,1192,1189,1361] |
1 |
hSpCas9 |
negative selection |
5565561 |
119809892 |
119809915 |
2 |
+ |
27260156 |
BXPC3 |
viability |
CAATGTACGAGCATCAGAGTTGG |
PTPN4 |
ENSG00000088179 |
0.013109022898517897 |
[769] |
[700,753,747,1089] |
0 |
hSpCas9 |
negative selection |
5565562 |
119862577 |
119862600 |
2 |
+ |
27260156 |
BXPC3 |
viability |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
1.2445305885584084 |
[51] |
[92,110,182,133] |
9 |
hSpCas9 |
negative selection |
5565563 |
119877330 |
119877353 |
2 |
+ |
27260156 |
BXPC3 |
viability |
TGGATCCAAACAAACCAATAAGG |
PTPN4 |
ENSG00000088179 |
0.19661076863790095 |
[226] |
[363,201,270,238] |
4 |
hSpCas9 |
negative selection |
5629819 |
119862630 |
119862653 |
2 |
- |
27260156 |
BXPC3 |
viability |
TACACTTACTGGGTTATCTGTGG |
PTPN4 |
ENSG00000088179 |
0.08719561118096061 |
[435] |
[421,445,490,597] |
2 |
hSpCas9 |
negative selection |
5629820 |
119877344 |
119877367 |
2 |
- |
27260156 |
BXPC3 |
viability |
CTCTTTAGCTGCTTCCTTATTGG |
PTPN4 |
ENSG00000088179 |
0.3686370906922568 |
[696] |
[942,852,890,1092] |
7 |
hSpCas9 |
negative selection |
5629821 |
119809858 |
119809881 |
2 |
- |
27260156 |
A673 |
viability |
AGCAGGCAATCGGAAACGTGAGG |
PTPN4 |
ENSG00000088179 |
-0.041617015405957414 |
[1078] |
[1401,1068,1226,1361] |
-1 |
hSpCas9 |
negative selection |
5686812 |
119809892 |
119809915 |
2 |
+ |
27260156 |
A673 |
viability |
CAATGTACGAGCATCAGAGTTGG |
PTPN4 |
ENSG00000088179 |
-0.09709769179277872 |
[769] |
[944,863,861,789] |
-2 |
hSpCas9 |
negative selection |
5686813 |
119862577 |
119862600 |
2 |
+ |
27260156 |
A673 |
viability |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
0.39824109379536976 |
[51] |
[78,103,65,78] |
8 |
hSpCas9 |
negative selection |
5686814 |
119877330 |
119877353 |
2 |
+ |
27260156 |
A673 |
viability |
TGGATCCAAACAAACCAATAAGG |
PTPN4 |
ENSG00000088179 |
0.02945515974464885 |
[226] |
[400,291,215,213] |
0 |
hSpCas9 |
negative selection |
5751070 |
119862630 |
119862653 |
2 |
- |
27260156 |
A673 |
viability |
TACACTTACTGGGTTATCTGTGG |
PTPN4 |
ENSG00000088179 |
0.1563010573170223 |
[435] |
[649,543,569,576] |
4 |
hSpCas9 |
negative selection |
5751071 |
119877344 |
119877367 |
2 |
- |
27260156 |
A673 |
viability |
CTCTTTAGCTGCTTCCTTATTGG |
PTPN4 |
ENSG00000088179 |
0.27046782092542987 |
[696] |
[1102,974,887,1086] |
6 |
hSpCas9 |
negative selection |
5751072 |
119809858 |
119809881 |
2 |
- |
27260156 |
A375 |
viability |
AGCAGGCAATCGGAAACGTGAGG |
PTPN4 |
ENSG00000088179 |
-0.10343164353885981 |
[1078] |
[1065,1421,1147,1094] |
-1 |
hSpCas9 |
negative selection |
5808063 |
119809892 |
119809915 |
2 |
+ |
27260156 |
A375 |
viability |
CAATGTACGAGCATCAGAGTTGG |
PTPN4 |
ENSG00000088179 |
-0.010862881135102254 |
[769] |
[896,964,1126,620] |
0 |
hSpCas9 |
negative selection |
5808064 |
119862577 |
119862600 |
2 |
+ |
27260156 |
A375 |
viability |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
0.8679486151086779 |
[51] |
[123,138,54,126] |
9 |
hSpCas9 |
negative selection |
5808065 |
119877330 |
119877353 |
2 |
+ |
27260156 |
A375 |
viability |
TGGATCCAAACAAACCAATAAGG |
PTPN4 |
ENSG00000088179 |
0.01170817796140633 |
[226] |
[143,400,228,306] |
0 |
hSpCas9 |
negative selection |
5872321 |
119862630 |
119862653 |
2 |
- |
27260156 |
A375 |
viability |
TACACTTACTGGGTTATCTGTGG |
PTPN4 |
ENSG00000088179 |
0.33004426743903614 |
[435] |
[621,1064,492,458] |
5 |
hSpCas9 |
negative selection |
5872322 |
119877344 |
119877367 |
2 |
- |
27260156 |
A375 |
viability |
CTCTTTAGCTGCTTCCTTATTGG |
PTPN4 |
ENSG00000088179 |
0.7257394691198571 |
[696] |
[1351,1629,1345,1118] |
9 |
hSpCas9 |
negative selection |
5872323 |
119809858 |
119809881 |
2 |
- |
27260156 |
COLO741 |
viability |
AGCAGGCAATCGGAAACGTGAGG |
PTPN4 |
ENSG00000088179 |
0.311538459298093 |
[1078] |
[2095,1230,1824] |
6 |
hSpCas9 |
negative selection |
5929314 |
119809892 |
119809915 |
2 |
+ |
27260156 |
COLO741 |
viability |
CAATGTACGAGCATCAGAGTTGG |
PTPN4 |
ENSG00000088179 |
-0.24034413512825203 |
[769] |
[902,884,722] |
-5 |
hSpCas9 |
negative selection |
5929315 |
119862577 |
119862600 |
2 |
+ |
27260156 |
COLO741 |
viability |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
0.49479897839893283 |
[51] |
[83,131,65] |
8 |
hSpCas9 |
negative selection |
5929316 |
119877330 |
119877353 |
2 |
+ |
27260156 |
COLO741 |
viability |
TGGATCCAAACAAACCAATAAGG |
PTPN4 |
ENSG00000088179 |
0.40797993380526854 |
[226] |
[457,376,328] |
8 |
hSpCas9 |
negative selection |
5993572 |
119862630 |
119862653 |
2 |
- |
27260156 |
COLO741 |
viability |
TACACTTACTGGGTTATCTGTGG |
PTPN4 |
ENSG00000088179 |
0.033562222956789595 |
[435] |
[748,556,428] |
0 |
hSpCas9 |
negative selection |
5993573 |
119877344 |
119877367 |
2 |
- |
27260156 |
COLO741 |
viability |
CTCTTTAGCTGCTTCCTTATTGG |
PTPN4 |
ENSG00000088179 |
0.5471650524557816 |
[696] |
[1385,1220,1300] |
9 |
hSpCas9 |
negative selection |
5993574 |
119809858 |
119809881 |
2 |
- |
27260156 |
CAL120 |
viability |
AGCAGGCAATCGGAAACGTGAGG |
PTPN4 |
ENSG00000088179 |
-0.21207690824113645 |
[1078] |
[1183,987,1305] |
-3 |
hSpCas9 |
negative selection |
6050565 |
119809892 |
119809915 |
2 |
+ |
27260156 |
CAL120 |
viability |
CAATGTACGAGCATCAGAGTTGG |
PTPN4 |
ENSG00000088179 |
0.0097232908775432 |
[769] |
[1169,1154,605] |
0 |
hSpCas9 |
negative selection |
6050566 |
119862577 |
119862600 |
2 |
+ |
27260156 |
CAL120 |
viability |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
1.1094007707545166 |
[51] |
[231,134,66] |
9 |
hSpCas9 |
negative selection |
6050567 |
119877330 |
119877353 |
2 |
+ |
27260156 |
CAL120 |
viability |
TGGATCCAAACAAACCAATAAGG |
PTPN4 |
ENSG00000088179 |
-0.23182840331195909 |
[226] |
[332,248,154] |
-3 |
hSpCas9 |
negative selection |
6114823 |
119862630 |
119862653 |
2 |
- |
27260156 |
CAL120 |
viability |
TACACTTACTGGGTTATCTGTGG |
PTPN4 |
ENSG00000088179 |
0.581979988604092 |
[435] |
[777,562,1084] |
8 |
hSpCas9 |
negative selection |
6114824 |
119877344 |
119877367 |
2 |
- |
27260156 |
CAL120 |
viability |
CTCTTTAGCTGCTTCCTTATTGG |
PTPN4 |
ENSG00000088179 |
0.586598034718854 |
[696] |
[1387,1241,1289] |
8 |
hSpCas9 |
negative selection |
6114825 |
119809858 |
119809881 |
2 |
- |
27260156 |
CADOES1 |
viability |
AGCAGGCAATCGGAAACGTGAGG |
PTPN4 |
ENSG00000088179 |
-0.2755406231013253 |
[1078] |
[973,684,841,813] |
-5 |
hSpCas9 |
negative selection |
6171816 |
119809892 |
119809915 |
2 |
+ |
27260156 |
CADOES1 |
viability |
CAATGTACGAGCATCAGAGTTGG |
PTPN4 |
ENSG00000088179 |
-0.061563793354161955 |
[769] |
[790,644,585,723] |
-1 |
hSpCas9 |
negative selection |
6171817 |
119862577 |
119862600 |
2 |
+ |
27260156 |
CADOES1 |
viability |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
1.0933601405667877 |
[51] |
[102,48,71,191] |
9 |
hSpCas9 |
negative selection |
6171818 |
119877330 |
119877353 |
2 |
+ |
27260156 |
CADOES1 |
viability |
TGGATCCAAACAAACCAATAAGG |
PTPN4 |
ENSG00000088179 |
0.2575519703421789 |
[226] |
[358,242,161,244] |
4 |
hSpCas9 |
negative selection |
6236074 |
119862630 |
119862653 |
2 |
- |
27260156 |
CADOES1 |
viability |
TACACTTACTGGGTTATCTGTGG |
PTPN4 |
ENSG00000088179 |
0.31611558843812315 |
[435] |
[523,498,524,469] |
5 |
hSpCas9 |
negative selection |
6236075 |
119877344 |
119877367 |
2 |
- |
27260156 |
CADOES1 |
viability |
CTCTTTAGCTGCTTCCTTATTGG |
PTPN4 |
ENSG00000088179 |
0.5760423821161291 |
[696] |
[617,920,1111,1224] |
8 |
hSpCas9 |
negative selection |
6236076 |
119809858 |
119809881 |
2 |
- |
27260156 |
EWS502 |
viability |
AGCAGGCAATCGGAAACGTGAGG |
PTPN4 |
ENSG00000088179 |
-0.06172645521763287 |
[1078] |
[871,1244,1103,1181] |
-1 |
hSpCas9 |
negative selection |
6293067 |
119809892 |
119809915 |
2 |
+ |
27260156 |
EWS502 |
viability |
CAATGTACGAGCATCAGAGTTGG |
PTPN4 |
ENSG00000088179 |
-0.3370528019949588 |
[769] |
[557,827,613,577] |
-5 |
hSpCas9 |
negative selection |
6293068 |
119862577 |
119862600 |
2 |
+ |
27260156 |
EWS502 |
viability |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
0.8975055678595227 |
[51] |
[40,162,93,117] |
9 |
hSpCas9 |
negative selection |
6293069 |
119877330 |
119877353 |
2 |
+ |
27260156 |
EWS502 |
viability |
TGGATCCAAACAAACCAATAAGG |
PTPN4 |
ENSG00000088179 |
0.4651296596050791 |
[226] |
[421,224,338,333] |
7 |
hSpCas9 |
negative selection |
6357325 |
119862630 |
119862653 |
2 |
- |
27260156 |
EWS502 |
viability |
TACACTTACTGGGTTATCTGTGG |
PTPN4 |
ENSG00000088179 |
0.10085874263842547 |
[435] |
[424,684,390,475] |
1 |
hSpCas9 |
negative selection |
6357326 |
119877344 |
119877367 |
2 |
- |
27260156 |
EWS502 |
viability |
CTCTTTAGCTGCTTCCTTATTGG |
PTPN4 |
ENSG00000088179 |
0.6057423686702144 |
[696] |
[1089,914,1287,1217] |
9 |
hSpCas9 |
negative selection |
6357327 |
119809858 |
119809881 |
2 |
- |
27260156 |
EW8 |
viability |
AGCAGGCAATCGGAAACGTGAGG |
PTPN4 |
ENSG00000088179 |
-0.25632406775353744 |
[1078] |
[687,695,797,727] |
-5 |
hSpCas9 |
negative selection |
6414318 |
119809892 |
119809915 |
2 |
+ |
27260156 |
EW8 |
viability |
CAATGTACGAGCATCAGAGTTGG |
PTPN4 |
ENSG00000088179 |
-0.5586793293310253 |
[769] |
[270,494,343,579] |
-7 |
hSpCas9 |
negative selection |
6414319 |
119862577 |
119862600 |
2 |
+ |
27260156 |
EW8 |
viability |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
1.096999711743127 |
[51] |
[79,64,149,53] |
9 |
hSpCas9 |
negative selection |
6414320 |
119877330 |
119877353 |
2 |
+ |
27260156 |
EW8 |
viability |
TGGATCCAAACAAACCAATAAGG |
PTPN4 |
ENSG00000088179 |
-0.07680647560986098 |
[226] |
[245,150,198,104] |
-1 |
hSpCas9 |
negative selection |
6478576 |
119862630 |
119862653 |
2 |
- |
27260156 |
EW8 |
viability |
TACACTTACTGGGTTATCTGTGG |
PTPN4 |
ENSG00000088179 |
0.08426145715286615 |
[435] |
[427,386,316,380] |
1 |
hSpCas9 |
negative selection |
6478577 |
119877344 |
119877367 |
2 |
- |
27260156 |
EW8 |
viability |
CTCTTTAGCTGCTTCCTTATTGG |
PTPN4 |
ENSG00000088179 |
0.5143452499586654 |
[696] |
[805,727,837,846] |
8 |
hSpCas9 |
negative selection |
6478578 |
119809858 |
119809881 |
2 |
- |
27260156 |
CORL105 |
viability |
AGCAGGCAATCGGAAACGTGAGG |
PTPN4 |
ENSG00000088179 |
-0.16473126697768237 |
[1078] |
[1217,1300,1058,918] |
-3 |
hSpCas9 |
negative selection |
6535569 |
119809892 |
119809915 |
2 |
+ |
27260156 |
CORL105 |
viability |
CAATGTACGAGCATCAGAGTTGG |
PTPN4 |
ENSG00000088179 |
-0.1251193568169393 |
[769] |
[702,1068,767,747] |
-2 |
hSpCas9 |
negative selection |
6535570 |
119862577 |
119862600 |
2 |
+ |
27260156 |
CORL105 |
viability |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
0.998109111367846 |
[51] |
[57,153,87,177] |
9 |
hSpCas9 |
negative selection |
6535571 |
119877330 |
119877353 |
2 |
+ |
27260156 |
CORL105 |
viability |
TGGATCCAAACAAACCAATAAGG |
PTPN4 |
ENSG00000088179 |
-0.10202601166028491 |
[226] |
[181,338,188,266] |
-2 |
hSpCas9 |
negative selection |
6599827 |
119862630 |
119862653 |
2 |
- |
27260156 |
CORL105 |
viability |
TACACTTACTGGGTTATCTGTGG |
PTPN4 |
ENSG00000088179 |
0.17640788956173611 |
[435] |
[435,601,562,697] |
3 |
hSpCas9 |
negative selection |
6599828 |
119877344 |
119877367 |
2 |
- |
27260156 |
CORL105 |
viability |
CTCTTTAGCTGCTTCCTTATTGG |
PTPN4 |
ENSG00000088179 |
0.5323957472968404 |
[696] |
[1007,1111,1344,1275] |
8 |
hSpCas9 |
negative selection |
6599829 |
119809858 |
119809881 |
2 |
- |
27260156 |
HS294T |
viability |
AGCAGGCAATCGGAAACGTGAGG |
PTPN4 |
ENSG00000088179 |
0.01908782374960949 |
[1078] |
[308,438,534,415] |
0 |
hSpCas9 |
negative selection |
6656820 |
119809892 |
119809915 |
2 |
+ |
27260156 |
HS294T |
viability |
CAATGTACGAGCATCAGAGTTGG |
PTPN4 |
ENSG00000088179 |
-0.03437385059583742 |
[769] |
[264,302,294,302] |
0 |
hSpCas9 |
negative selection |
6656821 |
119862577 |
119862600 |
2 |
+ |
27260156 |
HS294T |
viability |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
1.0342444783007352 |
[51] |
[64,32,20,43] |
9 |
hSpCas9 |
negative selection |
6656822 |
119877330 |
119877353 |
2 |
+ |
27260156 |
HS294T |
viability |
TGGATCCAAACAAACCAATAAGG |
PTPN4 |
ENSG00000088179 |
0.6834227367350649 |
[226] |
[128,208,123,91] |
8 |
hSpCas9 |
negative selection |
6721078 |
119862630 |
119862653 |
2 |
- |
27260156 |
HS294T |
viability |
TACACTTACTGGGTTATCTGTGG |
PTPN4 |
ENSG00000088179 |
-0.38116123393701745 |
[435] |
[89,78,183,177] |
-5 |
hSpCas9 |
negative selection |
6721079 |
119877344 |
119877367 |
2 |
- |
27260156 |
HS294T |
viability |
CTCTTTAGCTGCTTCCTTATTGG |
PTPN4 |
ENSG00000088179 |
0.8372288260974743 |
[696] |
[578,487,328,525] |
9 |
hSpCas9 |
negative selection |
6721080 |
119809858 |
119809881 |
2 |
- |
27260156 |
HCC44 |
viability |
AGCAGGCAATCGGAAACGTGAGG |
PTPN4 |
ENSG00000088179 |
-0.2423231819752707 |
[1078] |
[1112,1010,1094,923] |
-4 |
hSpCas9 |
negative selection |
6778071 |
119809892 |
119809915 |
2 |
+ |
27260156 |
HCC44 |
viability |
CAATGTACGAGCATCAGAGTTGG |
PTPN4 |
ENSG00000088179 |
-0.5470096977778564 |
[769] |
[713,586,647,455] |
-7 |
hSpCas9 |
negative selection |
6778072 |
119862577 |
119862600 |
2 |
+ |
27260156 |
HCC44 |
viability |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
0.7281411103939268 |
[51] |
[69,78,184,70] |
9 |
hSpCas9 |
negative selection |
6778073 |
119877330 |
119877353 |
2 |
+ |
27260156 |
HCC44 |
viability |
TGGATCCAAACAAACCAATAAGG |
PTPN4 |
ENSG00000088179 |
0.09265312317102214 |
[226] |
[398,169,298,255] |
1 |
hSpCas9 |
negative selection |
6842329 |
119862630 |
119862653 |
2 |
- |
27260156 |
HCC44 |
viability |
TACACTTACTGGGTTATCTGTGG |
PTPN4 |
ENSG00000088179 |
-0.16467017468161943 |
[435] |
[370,464,438,469] |
-3 |
hSpCas9 |
negative selection |
6842330 |
119877344 |
119877367 |
2 |
- |
27260156 |
HCC44 |
viability |
CTCTTTAGCTGCTTCCTTATTGG |
PTPN4 |
ENSG00000088179 |
0.45538883349181725 |
[696] |
[1030,1024,1352,959] |
7 |
hSpCas9 |
negative selection |
6842331 |
119809858 |
119809881 |
2 |
- |
27260156 |
G402 |
viability |
AGCAGGCAATCGGAAACGTGAGG |
PTPN4 |
ENSG00000088179 |
-0.27242584670014436 |
[1078] |
[1562,1281,830,774] |
-3 |
hSpCas9 |
negative selection |
6899322 |
119809892 |
119809915 |
2 |
+ |
27260156 |
G402 |
viability |
CAATGTACGAGCATCAGAGTTGG |
PTPN4 |
ENSG00000088179 |
0.11809382415683656 |
[769] |
[686,899,1331,1096] |
1 |
hSpCas9 |
negative selection |
6899323 |
119862577 |
119862600 |
2 |
+ |
27260156 |
G402 |
viability |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
1.072601041469592 |
[51] |
[111,126,118,169] |
9 |
hSpCas9 |
negative selection |
6899324 |
119877330 |
119877353 |
2 |
+ |
27260156 |
G402 |
viability |
TGGATCCAAACAAACCAATAAGG |
PTPN4 |
ENSG00000088179 |
-0.6281608757458319 |
[226] |
[289,134,197,109] |
-6 |
hSpCas9 |
negative selection |
6963580 |
119862630 |
119862653 |
2 |
- |
27260156 |
G402 |
viability |
TACACTTACTGGGTTATCTGTGG |
PTPN4 |
ENSG00000088179 |
0.2078459770015873 |
[435] |
[924,670,429,483] |
2 |
hSpCas9 |
negative selection |
6963581 |
119877344 |
119877367 |
2 |
- |
27260156 |
G402 |
viability |
CTCTTTAGCTGCTTCCTTATTGG |
PTPN4 |
ENSG00000088179 |
0.712107767916003 |
[696] |
[2269,1502,966,980] |
8 |
hSpCas9 |
negative selection |
6963582 |
119809858 |
119809881 |
2 |
- |
27260156 |
L33 |
viability |
AGCAGGCAATCGGAAACGTGAGG |
PTPN4 |
ENSG00000088179 |
0.10508752315749637 |
[1078] |
[1064,565,623,1203] |
2 |
hSpCas9 |
negative selection |
7020573 |
119809892 |
119809915 |
2 |
+ |
27260156 |
L33 |
viability |
CAATGTACGAGCATCAGAGTTGG |
PTPN4 |
ENSG00000088179 |
-0.003337254640109477 |
[769] |
[798,352,449,695] |
0 |
hSpCas9 |
negative selection |
7020574 |
119862577 |
119862600 |
2 |
+ |
27260156 |
L33 |
viability |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
0.04990225263459003 |
[51] |
[85,35,14,16] |
1 |
hSpCas9 |
negative selection |
7020575 |
119877330 |
119877353 |
2 |
+ |
27260156 |
L33 |
viability |
TGGATCCAAACAAACCAATAAGG |
PTPN4 |
ENSG00000088179 |
0.08531353363645988 |
[226] |
[264,115,113,232] |
2 |
hSpCas9 |
negative selection |
7084831 |
119862630 |
119862653 |
2 |
- |
27260156 |
L33 |
viability |
TACACTTACTGGGTTATCTGTGG |
PTPN4 |
ENSG00000088179 |
-0.19687014589085672 |
[435] |
[372,162,241,365] |
-4 |
hSpCas9 |
negative selection |
7084832 |
119877344 |
119877367 |
2 |
- |
27260156 |
L33 |
viability |
CTCTTTAGCTGCTTCCTTATTGG |
PTPN4 |
ENSG00000088179 |
0.16175453134124296 |
[696] |
[827,317,456,785] |
3 |
hSpCas9 |
negative selection |
7084833 |
119809858 |
119809881 |
2 |
- |
27260156 |
K562 |
viability |
AGCAGGCAATCGGAAACGTGAGG |
PTPN4 |
ENSG00000088179 |
0.20056996210449518 |
[1078] |
[903,1030,2001,509] |
2 |
hSpCas9 |
negative selection |
7141824 |
119809892 |
119809915 |
2 |
+ |
27260156 |
K562 |
viability |
CAATGTACGAGCATCAGAGTTGG |
PTPN4 |
ENSG00000088179 |
-0.45715411775237513 |
[769] |
[542,386,419,621] |
-5 |
hSpCas9 |
negative selection |
7141825 |
119862577 |
119862600 |
2 |
+ |
27260156 |
K562 |
viability |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
-0.4766229833519753 |
[51] |
[73,1,22,34] |
-5 |
hSpCas9 |
negative selection |
7141826 |
119877330 |
119877353 |
2 |
+ |
27260156 |
K562 |
viability |
TGGATCCAAACAAACCAATAAGG |
PTPN4 |
ENSG00000088179 |
0.5184271285573377 |
[226] |
[307,252,522,91] |
6 |
hSpCas9 |
negative selection |
7206082 |
119862630 |
119862653 |
2 |
- |
27260156 |
K562 |
viability |
TACACTTACTGGGTTATCTGTGG |
PTPN4 |
ENSG00000088179 |
0.0253393163492263 |
[435] |
[662,268,414,257] |
0 |
hSpCas9 |
negative selection |
7206083 |
119877344 |
119877367 |
2 |
- |
27260156 |
K562 |
viability |
CTCTTTAGCTGCTTCCTTATTGG |
PTPN4 |
ENSG00000088179 |
0.4300072963371129 |
[696] |
[1146,833,904,507] |
5 |
hSpCas9 |
negative selection |
7206084 |
119809858 |
119809881 |
2 |
- |
27260156 |
HT29 |
viability |
AGCAGGCAATCGGAAACGTGAGG |
PTPN4 |
ENSG00000088179 |
-0.03900873961374174 |
[1078] |
[1397,1302,1248,1171] |
-1 |
hSpCas9 |
negative selection |
7263075 |
119809892 |
119809915 |
2 |
+ |
27260156 |
HT29 |
viability |
CAATGTACGAGCATCAGAGTTGG |
PTPN4 |
ENSG00000088179 |
-0.2913883230527801 |
[769] |
[893,750,719,704] |
-5 |
hSpCas9 |
negative selection |
7263076 |
119862577 |
119862600 |
2 |
+ |
27260156 |
HT29 |
viability |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
0.786142806668654 |
[51] |
[119,104,148,66] |
9 |
hSpCas9 |
negative selection |
7263077 |
119877330 |
119877353 |
2 |
+ |
27260156 |
HT29 |
viability |
TGGATCCAAACAAACCAATAAGG |
PTPN4 |
ENSG00000088179 |
0.5284595136039139 |
[226] |
[302,587,226,470] |
8 |
hSpCas9 |
negative selection |
7327333 |
119862630 |
119862653 |
2 |
- |
27260156 |
HT29 |
viability |
TACACTTACTGGGTTATCTGTGG |
PTPN4 |
ENSG00000088179 |
0.21586722312911005 |
[435] |
[737,462,708,551] |
4 |
hSpCas9 |
negative selection |
7327334 |
119877344 |
119877367 |
2 |
- |
27260156 |
HT29 |
viability |
CTCTTTAGCTGCTTCCTTATTGG |
PTPN4 |
ENSG00000088179 |
0.5296537936584524 |
[696] |
[1317,1097,1266,1199] |
8 |
hSpCas9 |
negative selection |
7327335 |
119809858 |
119809881 |
2 |
- |
27260156 |
MHHES1 |
viability |
AGCAGGCAATCGGAAACGTGAGG |
PTPN4 |
ENSG00000088179 |
-0.24823067804720456 |
[1078] |
[1157,1239,1018,753] |
-5 |
hSpCas9 |
negative selection |
7384326 |
119809892 |
119809915 |
2 |
+ |
27260156 |
MHHES1 |
viability |
CAATGTACGAGCATCAGAGTTGG |
PTPN4 |
ENSG00000088179 |
-0.08505208537146047 |
[769] |
[1016,639,1196,484] |
-1 |
hSpCas9 |
negative selection |
7384327 |
119862577 |
119862600 |
2 |
+ |
27260156 |
MHHES1 |
viability |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
-0.010922958424466778 |
[51] |
[25,57,67,71] |
0 |
hSpCas9 |
negative selection |
7384328 |
119877330 |
119877353 |
2 |
+ |
27260156 |
MHHES1 |
viability |
TGGATCCAAACAAACCAATAAGG |
PTPN4 |
ENSG00000088179 |
-0.34832618705439344 |
[226] |
[242,150,240,170] |
-6 |
hSpCas9 |
negative selection |
7448584 |
119862630 |
119862653 |
2 |
- |
27260156 |
MHHES1 |
viability |
TACACTTACTGGGTTATCTGTGG |
PTPN4 |
ENSG00000088179 |
0.10459565796306466 |
[435] |
[584,718,462,390] |
2 |
hSpCas9 |
negative selection |
7448585 |
119877344 |
119877367 |
2 |
- |
27260156 |
MHHES1 |
viability |
CTCTTTAGCTGCTTCCTTATTGG |
PTPN4 |
ENSG00000088179 |
0.5329105646342651 |
[696] |
[972,1227,1217,1096] |
8 |
hSpCas9 |
negative selection |
7448586 |
119809858 |
119809881 |
2 |
- |
27260156 |
MEWO |
viability |
AGCAGGCAATCGGAAACGTGAGG |
PTPN4 |
ENSG00000088179 |
-0.12657553868936366 |
[1078] |
[1152,732,932] |
-3 |
hSpCas9 |
negative selection |
7505577 |
119809892 |
119809915 |
2 |
+ |
27260156 |
MEWO |
viability |
CAATGTACGAGCATCAGAGTTGG |
PTPN4 |
ENSG00000088179 |
-0.11098312630673102 |
[769] |
[798,573,653] |
-2 |
hSpCas9 |
negative selection |
7505578 |
119862577 |
119862600 |
2 |
+ |
27260156 |
MEWO |
viability |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
0.3805121134481726 |
[51] |
[63,85,39] |
7 |
hSpCas9 |
negative selection |
7505579 |
119877330 |
119877353 |
2 |
+ |
27260156 |
MEWO |
viability |
TGGATCCAAACAAACCAATAAGG |
PTPN4 |
ENSG00000088179 |
0.42891956014323696 |
[226] |
[419,207,255] |
8 |
hSpCas9 |
negative selection |
7569835 |
119862630 |
119862653 |
2 |
- |
27260156 |
MEWO |
viability |
TACACTTACTGGGTTATCTGTGG |
PTPN4 |
ENSG00000088179 |
0.1816149739041012 |
[435] |
[489,478,423] |
4 |
hSpCas9 |
negative selection |
7569836 |
119877344 |
119877367 |
2 |
- |
27260156 |
MEWO |
viability |
CTCTTTAGCTGCTTCCTTATTGG |
PTPN4 |
ENSG00000088179 |
0.5248942835992192 |
[696] |
[968,829,1021] |
9 |
hSpCas9 |
negative selection |
7569837 |
119809858 |
119809881 |
2 |
- |
27260156 |
LNCAPCLONEFGC |
viability |
AGCAGGCAATCGGAAACGTGAGG |
PTPN4 |
ENSG00000088179 |
-0.3007256682444712 |
[1078] |
[705,780,826,866] |
-5 |
hSpCas9 |
negative selection |
7626828 |
119809892 |
119809915 |
2 |
+ |
27260156 |
LNCAPCLONEFGC |
viability |
CAATGTACGAGCATCAGAGTTGG |
PTPN4 |
ENSG00000088179 |
-0.13664317322684316 |
[769] |
[454,714,737,642] |
-2 |
hSpCas9 |
negative selection |
7626829 |
119862577 |
119862600 |
2 |
+ |
27260156 |
LNCAPCLONEFGC |
viability |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
1.6971094543972693 |
[51] |
[237,147,81,130] |
9 |
hSpCas9 |
negative selection |
7626830 |
119877330 |
119877353 |
2 |
+ |
27260156 |
LNCAPCLONEFGC |
viability |
TGGATCCAAACAAACCAATAAGG |
PTPN4 |
ENSG00000088179 |
0.25525874521866854 |
[226] |
[266,284,241,183] |
4 |
hSpCas9 |
negative selection |
7691086 |
119862630 |
119862653 |
2 |
- |
27260156 |
LNCAPCLONEFGC |
viability |
TACACTTACTGGGTTATCTGTGG |
PTPN4 |
ENSG00000088179 |
0.37279172750185086 |
[435] |
[463,422,719,475] |
6 |
hSpCas9 |
negative selection |
7691087 |
119877344 |
119877367 |
2 |
- |
27260156 |
LNCAPCLONEFGC |
viability |
CTCTTTAGCTGCTTCCTTATTGG |
PTPN4 |
ENSG00000088179 |
0.5950471763591312 |
[696] |
[953,791,1041,1049] |
8 |
hSpCas9 |
negative selection |
7691088 |
119809858 |
119809881 |
2 |
- |
27260156 |
PANC0327 |
viability |
AGCAGGCAATCGGAAACGTGAGG |
PTPN4 |
ENSG00000088179 |
0.11206990412775997 |
[1078] |
[1021,942,994,1193] |
1 |
hSpCas9 |
negative selection |
7748079 |
119809892 |
119809915 |
2 |
+ |
27260156 |
PANC0327 |
viability |
CAATGTACGAGCATCAGAGTTGG |
PTPN4 |
ENSG00000088179 |
0.003399567761566691 |
[769] |
[1085,627,386,680] |
0 |
hSpCas9 |
negative selection |
7748080 |
119862577 |
119862600 |
2 |
+ |
27260156 |
PANC0327 |
viability |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
0.9674535993233473 |
[51] |
[60,165,34,86] |
9 |
hSpCas9 |
negative selection |
7748081 |
119877330 |
119877353 |
2 |
+ |
27260156 |
PANC0327 |
viability |
TGGATCCAAACAAACCAATAAGG |
PTPN4 |
ENSG00000088179 |
0.7333005854924735 |
[226] |
[375,482,251,213] |
9 |
hSpCas9 |
negative selection |
7812337 |
119862630 |
119862653 |
2 |
- |
27260156 |
PANC0327 |
viability |
TACACTTACTGGGTTATCTGTGG |
PTPN4 |
ENSG00000088179 |
0.5288394046434098 |
[435] |
[443,816,406,523] |
7 |
hSpCas9 |
negative selection |
7812338 |
119877344 |
119877367 |
2 |
- |
27260156 |
PANC0327 |
viability |
CTCTTTAGCTGCTTCCTTATTGG |
PTPN4 |
ENSG00000088179 |
0.2580469328367999 |
[696] |
[637,545,767,1025] |
4 |
hSpCas9 |
negative selection |
7812339 |
119809858 |
119809881 |
2 |
- |
27260156 |
NCIH2009 |
viability |
AGCAGGCAATCGGAAACGTGAGG |
PTPN4 |
ENSG00000088179 |
0.179245174847672 |
[1078] |
[2080,1647,1463] |
2 |
hSpCas9 |
negative selection |
7869330 |
119809892 |
119809915 |
2 |
+ |
27260156 |
NCIH2009 |
viability |
CAATGTACGAGCATCAGAGTTGG |
PTPN4 |
ENSG00000088179 |
0.19603976393402756 |
[769] |
[1556,1080,1123] |
2 |
hSpCas9 |
negative selection |
7869331 |
119862577 |
119862600 |
2 |
+ |
27260156 |
NCIH2009 |
viability |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
0.032740884427174155 |
[51] |
[101,35,90] |
0 |
hSpCas9 |
negative selection |
7869332 |
119877330 |
119877353 |
2 |
+ |
27260156 |
NCIH2009 |
viability |
TGGATCCAAACAAACCAATAAGG |
PTPN4 |
ENSG00000088179 |
-0.6368900159050144 |
[226] |
[396,131,121] |
-7 |
hSpCas9 |
negative selection |
7933588 |
119862630 |
119862653 |
2 |
- |
27260156 |
NCIH2009 |
viability |
TACACTTACTGGGTTATCTGTGG |
PTPN4 |
ENSG00000088179 |
0.07011615662000477 |
[435] |
[601,528,780] |
1 |
hSpCas9 |
negative selection |
7933589 |
119877344 |
119877367 |
2 |
- |
27260156 |
NCIH2009 |
viability |
CTCTTTAGCTGCTTCCTTATTGG |
PTPN4 |
ENSG00000088179 |
0.6112459869988152 |
[696] |
[1524,1080,1868] |
8 |
hSpCas9 |
negative selection |
7933590 |
119809858 |
119809881 |
2 |
- |
27260156 |
NCIH1373 |
viability |
AGCAGGCAATCGGAAACGTGAGG |
PTPN4 |
ENSG00000088179 |
-0.15980109617467253 |
[1078] |
[840,1653,625,292] |
-1 |
hSpCas9 |
negative selection |
7990581 |
119809892 |
119809915 |
2 |
+ |
27260156 |
NCIH1373 |
viability |
CAATGTACGAGCATCAGAGTTGG |
PTPN4 |
ENSG00000088179 |
-0.34000296706640365 |
[769] |
[707,624,480,246] |
-3 |
hSpCas9 |
negative selection |
7990582 |
119862577 |
119862600 |
2 |
+ |
27260156 |
NCIH1373 |
viability |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
1.2378828041626009 |
[51] |
[183,69,227,19] |
9 |
hSpCas9 |
negative selection |
7990583 |
119877330 |
119877353 |
2 |
+ |
27260156 |
NCIH1373 |
viability |
TGGATCCAAACAAACCAATAAGG |
PTPN4 |
ENSG00000088179 |
-0.646592354799074 |
[226] |
[295,85,227,15] |
-6 |
hSpCas9 |
negative selection |
8054839 |
119862630 |
119862653 |
2 |
- |
27260156 |
NCIH1373 |
viability |
TACACTTACTGGGTTATCTGTGG |
PTPN4 |
ENSG00000088179 |
0.7058677955736362 |
[435] |
[556,553,1312,192] |
7 |
hSpCas9 |
negative selection |
8054840 |
119877344 |
119877367 |
2 |
- |
27260156 |
NCIH1373 |
viability |
CTCTTTAGCTGCTTCCTTATTGG |
PTPN4 |
ENSG00000088179 |
0.9720764135425608 |
[696] |
[1631,1569,1578,351] |
8 |
hSpCas9 |
negative selection |
8054841 |
119809858 |
119809881 |
2 |
- |
27260156 |
PATU8902 |
viability |
AGCAGGCAATCGGAAACGTGAGG |
PTPN4 |
ENSG00000088179 |
0.021418291020387503 |
[1078] |
[1736,2411,927,1117] |
0 |
hSpCas9 |
negative selection |
8111832 |
119809892 |
119809915 |
2 |
+ |
27260156 |
PATU8902 |
viability |
CAATGTACGAGCATCAGAGTTGG |
PTPN4 |
ENSG00000088179 |
-0.6909146384304563 |
[769] |
[726,783,417,802] |
-6 |
hSpCas9 |
negative selection |
8111833 |
119862577 |
119862600 |
2 |
+ |
27260156 |
PATU8902 |
viability |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
1.649226348269594 |
[51] |
[153,169,419,97] |
9 |
hSpCas9 |
negative selection |
8111834 |
119877330 |
119877353 |
2 |
+ |
27260156 |
PATU8902 |
viability |
TGGATCCAAACAAACCAATAAGG |
PTPN4 |
ENSG00000088179 |
0.367772434162698 |
[226] |
[470,304,333,553] |
4 |
hSpCas9 |
negative selection |
8176090 |
119862630 |
119862653 |
2 |
- |
27260156 |
PATU8902 |
viability |
TACACTTACTGGGTTATCTGTGG |
PTPN4 |
ENSG00000088179 |
0.9277268686014218 |
[435] |
[1756,951,342,1843] |
8 |
hSpCas9 |
negative selection |
8176091 |
119877344 |
119877367 |
2 |
- |
27260156 |
PATU8902 |
viability |
CTCTTTAGCTGCTTCCTTATTGG |
PTPN4 |
ENSG00000088179 |
0.8711888598807602 |
[696] |
[1715,2010,1262,2294] |
8 |
hSpCas9 |
negative selection |
8176092 |
119809858 |
119809881 |
2 |
- |
27260156 |
PANC1 |
viability |
AGCAGGCAATCGGAAACGTGAGG |
PTPN4 |
ENSG00000088179 |
-0.2728726989093774 |
[1078] |
[626,1120,734,664] |
-4 |
hSpCas9 |
negative selection |
8233083 |
119809892 |
119809915 |
2 |
+ |
27260156 |
PANC1 |
viability |
CAATGTACGAGCATCAGAGTTGG |
PTPN4 |
ENSG00000088179 |
-0.11897153617198464 |
[769] |
[593,705,546,599] |
-2 |
hSpCas9 |
negative selection |
8233084 |
119862577 |
119862600 |
2 |
+ |
27260156 |
PANC1 |
viability |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
0.33926528546261503 |
[51] |
[89,35,50,44] |
5 |
hSpCas9 |
negative selection |
8233085 |
119877330 |
119877353 |
2 |
+ |
27260156 |
PANC1 |
viability |
TGGATCCAAACAAACCAATAAGG |
PTPN4 |
ENSG00000088179 |
1.5542738160012408 |
[226] |
[230,1905,148,315] |
9 |
hSpCas9 |
negative selection |
8297341 |
119862630 |
119862653 |
2 |
- |
27260156 |
PANC1 |
viability |
TACACTTACTGGGTTATCTGTGG |
PTPN4 |
ENSG00000088179 |
0.35325420415306996 |
[435] |
[387,799,324,461] |
6 |
hSpCas9 |
negative selection |
8297342 |
119877344 |
119877367 |
2 |
- |
27260156 |
PANC1 |
viability |
CTCTTTAGCTGCTTCCTTATTGG |
PTPN4 |
ENSG00000088179 |
0.5699506270183168 |
[696] |
[865,1111,785,830] |
8 |
hSpCas9 |
negative selection |
8297343 |
119809858 |
119809881 |
2 |
- |
27260156 |
PANC0813 |
viability |
AGCAGGCAATCGGAAACGTGAGG |
PTPN4 |
ENSG00000088179 |
0.24459179814771104 |
[1078] |
[1999,1464,1458,1145] |
4 |
hSpCas9 |
negative selection |
8354334 |
119809892 |
119809915 |
2 |
+ |
27260156 |
PANC0813 |
viability |
CAATGTACGAGCATCAGAGTTGG |
PTPN4 |
ENSG00000088179 |
0.028121619421122457 |
[769] |
[1056,822,983,840] |
0 |
hSpCas9 |
negative selection |
8354335 |
119862577 |
119862600 |
2 |
+ |
27260156 |
PANC0813 |
viability |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
0.08993150324261112 |
[51] |
[32,115,79,29] |
1 |
hSpCas9 |
negative selection |
8354336 |
119877330 |
119877353 |
2 |
+ |
27260156 |
PANC0813 |
viability |
TGGATCCAAACAAACCAATAAGG |
PTPN4 |
ENSG00000088179 |
-0.13497468256397016 |
[226] |
[362,124,248,244] |
-2 |
hSpCas9 |
negative selection |
8418592 |
119862630 |
119862653 |
2 |
- |
27260156 |
PANC0813 |
viability |
TACACTTACTGGGTTATCTGTGG |
PTPN4 |
ENSG00000088179 |
-0.1322370717779512 |
[435] |
[525,556,321,467] |
-2 |
hSpCas9 |
negative selection |
8418593 |
119877344 |
119877367 |
2 |
- |
27260156 |
PANC0813 |
viability |
CTCTTTAGCTGCTTCCTTATTGG |
PTPN4 |
ENSG00000088179 |
0.40984256170960376 |
[696] |
[1287,1179,807,1089] |
6 |
hSpCas9 |
negative selection |
8418594 |
119809858 |
119809881 |
2 |
- |
27260156 |
RDES |
viability |
AGCAGGCAATCGGAAACGTGAGG |
PTPN4 |
ENSG00000088179 |
-0.26337411197280136 |
[1078] |
[779,1190,918,1287] |
-4 |
hSpCas9 |
negative selection |
8475585 |
119809892 |
119809915 |
2 |
+ |
27260156 |
RDES |
viability |
CAATGTACGAGCATCAGAGTTGG |
PTPN4 |
ENSG00000088179 |
-0.4089733501366727 |
[769] |
[537,579,792,797] |
-6 |
hSpCas9 |
negative selection |
8475586 |
119862577 |
119862600 |
2 |
+ |
27260156 |
RDES |
viability |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
1.0275953268114923 |
[51] |
[68,120,153,158] |
9 |
hSpCas9 |
negative selection |
8475587 |
119877330 |
119877353 |
2 |
+ |
27260156 |
RDES |
viability |
TGGATCCAAACAAACCAATAAGG |
PTPN4 |
ENSG00000088179 |
0.15842964031863227 |
[226] |
[162,332,416,269] |
2 |
hSpCas9 |
negative selection |
8539843 |
119862630 |
119862653 |
2 |
- |
27260156 |
RDES |
viability |
TACACTTACTGGGTTATCTGTGG |
PTPN4 |
ENSG00000088179 |
0.34706979907220176 |
[435] |
[437,636,633,908] |
5 |
hSpCas9 |
negative selection |
8539844 |
119877344 |
119877367 |
2 |
- |
27260156 |
RDES |
viability |
CTCTTTAGCTGCTTCCTTATTGG |
PTPN4 |
ENSG00000088179 |
0.6317852948941214 |
[696] |
[923,1268,1195,1672] |
8 |
hSpCas9 |
negative selection |
8539845 |
119809858 |
119809881 |
2 |
- |
27260156 |
PC3 |
viability |
AGCAGGCAATCGGAAACGTGAGG |
PTPN4 |
ENSG00000088179 |
-0.23605910416597387 |
[1078] |
[782,733,1354,901] |
-5 |
hSpCas9 |
negative selection |
8596836 |
119809892 |
119809915 |
2 |
+ |
27260156 |
PC3 |
viability |
CAATGTACGAGCATCAGAGTTGG |
PTPN4 |
ENSG00000088179 |
-0.2156656407893025 |
[769] |
[358,710,1067,739] |
-5 |
hSpCas9 |
negative selection |
8596837 |
119862577 |
119862600 |
2 |
+ |
27260156 |
PC3 |
viability |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
0.8896170199307196 |
[51] |
[47,17,136,220] |
9 |
hSpCas9 |
negative selection |
8596838 |
119877330 |
119877353 |
2 |
+ |
27260156 |
PC3 |
viability |
TGGATCCAAACAAACCAATAAGG |
PTPN4 |
ENSG00000088179 |
0.33809978414241226 |
[226] |
[131,261,368,468] |
7 |
hSpCas9 |
negative selection |
8661094 |
119862630 |
119862653 |
2 |
- |
27260156 |
PC3 |
viability |
TACACTTACTGGGTTATCTGTGG |
PTPN4 |
ENSG00000088179 |
0.12412333765862565 |
[435] |
[292,441,839,498] |
2 |
hSpCas9 |
negative selection |
8661095 |
119877344 |
119877367 |
2 |
- |
27260156 |
PC3 |
viability |
CTCTTTAGCTGCTTCCTTATTGG |
PTPN4 |
ENSG00000088179 |
0.3710170193022124 |
[696] |
[573,933,1104,1120] |
7 |
hSpCas9 |
negative selection |
8661096 |
119809858 |
119809881 |
2 |
- |
27260156 |
PATU8988T |
viability |
AGCAGGCAATCGGAAACGTGAGG |
PTPN4 |
ENSG00000088179 |
0.04946448623949795 |
[1078] |
[907,1679,760,1022] |
0 |
hSpCas9 |
negative selection |
8718087 |
119809892 |
119809915 |
2 |
+ |
27260156 |
PATU8988T |
viability |
CAATGTACGAGCATCAGAGTTGG |
PTPN4 |
ENSG00000088179 |
-0.0008050725450520213 |
[769] |
[664,852,702,765] |
0 |
hSpCas9 |
negative selection |
8718088 |
119862577 |
119862600 |
2 |
+ |
27260156 |
PATU8988T |
viability |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
0.6148718407301592 |
[51] |
[56,77,91,80] |
8 |
hSpCas9 |
negative selection |
8718089 |
119877330 |
119877353 |
2 |
+ |
27260156 |
PATU8988T |
viability |
TGGATCCAAACAAACCAATAAGG |
PTPN4 |
ENSG00000088179 |
0.5042340751889651 |
[226] |
[412,319,258,248] |
8 |
hSpCas9 |
negative selection |
8782345 |
119862630 |
119862653 |
2 |
- |
27260156 |
PATU8988T |
viability |
TACACTTACTGGGTTATCTGTGG |
PTPN4 |
ENSG00000088179 |
0.506353666852065 |
[435] |
[664,668,401,672] |
8 |
hSpCas9 |
negative selection |
8782346 |
119877344 |
119877367 |
2 |
- |
27260156 |
PATU8988T |
viability |
CTCTTTAGCTGCTTCCTTATTGG |
PTPN4 |
ENSG00000088179 |
0.2757927043323869 |
[696] |
[784,1018,668,808] |
5 |
hSpCas9 |
negative selection |
8782347 |
119809858 |
119809881 |
2 |
- |
27260156 |
T47D |
viability |
AGCAGGCAATCGGAAACGTGAGG |
PTPN4 |
ENSG00000088179 |
0.026915063904703107 |
[1078] |
[1372,1207,1292,1253] |
0 |
hSpCas9 |
negative selection |
8839338 |
119809892 |
119809915 |
2 |
+ |
27260156 |
T47D |
viability |
CAATGTACGAGCATCAGAGTTGG |
PTPN4 |
ENSG00000088179 |
-0.007295489661514054 |
[769] |
[970,820,938,842] |
0 |
hSpCas9 |
negative selection |
8839339 |
119862577 |
119862600 |
2 |
+ |
27260156 |
T47D |
viability |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
0.7732891254140628 |
[51] |
[93,103,150,62] |
9 |
hSpCas9 |
negative selection |
8839340 |
119877330 |
119877353 |
2 |
+ |
27260156 |
T47D |
viability |
TGGATCCAAACAAACCAATAAGG |
PTPN4 |
ENSG00000088179 |
0.08907815141732556 |
[226] |
[225,308,326,258] |
1 |
hSpCas9 |
negative selection |
8903596 |
119862630 |
119862653 |
2 |
- |
27260156 |
T47D |
viability |
TACACTTACTGGGTTATCTGTGG |
PTPN4 |
ENSG00000088179 |
0.25081703971938696 |
[435] |
[634,527,539,725] |
5 |
hSpCas9 |
negative selection |
8903597 |
119877344 |
119877367 |
2 |
- |
27260156 |
T47D |
viability |
CTCTTTAGCTGCTTCCTTATTGG |
PTPN4 |
ENSG00000088179 |
0.5635141469666456 |
[696] |
[1051,1164,1142,1450] |
9 |
hSpCas9 |
negative selection |
8903598 |
119809858 |
119809881 |
2 |
- |
27260156 |
SU8686 |
viability |
AGCAGGCAATCGGAAACGTGAGG |
PTPN4 |
ENSG00000088179 |
-0.1165938005868945 |
[1078] |
[864,941,1078,1092] |
-2 |
hSpCas9 |
negative selection |
8960589 |
119809892 |
119809915 |
2 |
+ |
27260156 |
SU8686 |
viability |
CAATGTACGAGCATCAGAGTTGG |
PTPN4 |
ENSG00000088179 |
0.12859420466275362 |
[769] |
[780,641,802,1194] |
2 |
hSpCas9 |
negative selection |
8960590 |
119862577 |
119862600 |
2 |
+ |
27260156 |
SU8686 |
viability |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
1.0225962698265008 |
[51] |
[169,106,64,59] |
9 |
hSpCas9 |
negative selection |
8960591 |
119877330 |
119877353 |
2 |
+ |
27260156 |
SU8686 |
viability |
TGGATCCAAACAAACCAATAAGG |
PTPN4 |
ENSG00000088179 |
0.0594995877740182 |
[226] |
[181,238,276,246] |
1 |
hSpCas9 |
negative selection |
9024847 |
119862630 |
119862653 |
2 |
- |
27260156 |
SU8686 |
viability |
TACACTTACTGGGTTATCTGTGG |
PTPN4 |
ENSG00000088179 |
0.2596043887469527 |
[435] |
[422,459,701,501] |
4 |
hSpCas9 |
negative selection |
9024848 |
119877344 |
119877367 |
2 |
- |
27260156 |
SU8686 |
viability |
CTCTTTAGCTGCTTCCTTATTGG |
PTPN4 |
ENSG00000088179 |
0.3542607318804155 |
[696] |
[734,675,1182,1004] |
6 |
hSpCas9 |
negative selection |
9024849 |
119809858 |
119809881 |
2 |
- |
27260156 |
SKES1 |
viability |
AGCAGGCAATCGGAAACGTGAGG |
PTPN4 |
ENSG00000088179 |
-0.1866924387568749 |
[1078] |
[1060,932,968,836] |
-4 |
hSpCas9 |
negative selection |
9081840 |
119809892 |
119809915 |
2 |
+ |
27260156 |
SKES1 |
viability |
CAATGTACGAGCATCAGAGTTGG |
PTPN4 |
ENSG00000088179 |
-0.34942658171268265 |
[769] |
[678,650,552,545] |
-6 |
hSpCas9 |
negative selection |
9081841 |
119862577 |
119862600 |
2 |
+ |
27260156 |
SKES1 |
viability |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
0.6164394799057966 |
[51] |
[44,181,43,56] |
9 |
hSpCas9 |
negative selection |
9081842 |
119877330 |
119877353 |
2 |
+ |
27260156 |
SKES1 |
viability |
TGGATCCAAACAAACCAATAAGG |
PTPN4 |
ENSG00000088179 |
-0.19345596519658215 |
[226] |
[176,241,199,175] |
-4 |
hSpCas9 |
negative selection |
9146098 |
119862630 |
119862653 |
2 |
- |
27260156 |
SKES1 |
viability |
TACACTTACTGGGTTATCTGTGG |
PTPN4 |
ENSG00000088179 |
0.30656975678377524 |
[435] |
[704,603,480,403] |
6 |
hSpCas9 |
negative selection |
9146099 |
119877344 |
119877367 |
2 |
- |
27260156 |
SKES1 |
viability |
CTCTTTAGCTGCTTCCTTATTGG |
PTPN4 |
ENSG00000088179 |
0.4633533662474183 |
[696] |
[969,1079,842,949] |
8 |
hSpCas9 |
negative selection |
9146100 |
119809858 |
119809881 |
2 |
- |
27260156 |
TOV112D |
viability |
AGCAGGCAATCGGAAACGTGAGG |
PTPN4 |
ENSG00000088179 |
-0.17888929472552717 |
[1078] |
[1002,1230,805,851] |
-3 |
hSpCas9 |
negative selection |
9203091 |
119809892 |
119809915 |
2 |
+ |
27260156 |
TOV112D |
viability |
CAATGTACGAGCATCAGAGTTGG |
PTPN4 |
ENSG00000088179 |
-0.3096932932955532 |
[769] |
[518,776,663,558] |
-6 |
hSpCas9 |
negative selection |
9203092 |
119862577 |
119862600 |
2 |
+ |
27260156 |
TOV112D |
viability |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
0.8173075845102185 |
[51] |
[88,51,90,123] |
9 |
hSpCas9 |
negative selection |
9203093 |
119877330 |
119877353 |
2 |
+ |
27260156 |
TOV112D |
viability |
TGGATCCAAACAAACCAATAAGG |
PTPN4 |
ENSG00000088179 |
0.1709584770573861 |
[226] |
[212,157,271,349] |
3 |
hSpCas9 |
negative selection |
9267349 |
119862630 |
119862653 |
2 |
- |
27260156 |
TOV112D |
viability |
TACACTTACTGGGTTATCTGTGG |
PTPN4 |
ENSG00000088179 |
0.1551424956769627 |
[435] |
[417,673,454,438] |
3 |
hSpCas9 |
negative selection |
9267350 |
119877344 |
119877367 |
2 |
- |
27260156 |
TOV112D |
viability |
CTCTTTAGCTGCTTCCTTATTGG |
PTPN4 |
ENSG00000088179 |
0.4017712403459438 |
[696] |
[868,1466,773,712] |
7 |
hSpCas9 |
negative selection |
9267351 |
119809858 |
119809881 |
2 |
- |
27260156 |
TC71 |
viability |
AGCAGGCAATCGGAAACGTGAGG |
PTPN4 |
ENSG00000088179 |
-0.104002547174888 |
[1078] |
[1103,1120,908,1181] |
-3 |
hSpCas9 |
negative selection |
9324342 |
119809892 |
119809915 |
2 |
+ |
27260156 |
TC71 |
viability |
CAATGTACGAGCATCAGAGTTGG |
PTPN4 |
ENSG00000088179 |
-0.3423476452145834 |
[769] |
[514,707,665,721] |
-7 |
hSpCas9 |
negative selection |
9324343 |
119862577 |
119862600 |
2 |
+ |
27260156 |
TC71 |
viability |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
0.8339722089647488 |
[51] |
[69,106,104,116] |
9 |
hSpCas9 |
negative selection |
9324344 |
119877330 |
119877353 |
2 |
+ |
27260156 |
TC71 |
viability |
TGGATCCAAACAAACCAATAAGG |
PTPN4 |
ENSG00000088179 |
-0.04587049185130998 |
[226] |
[175,249,257,260] |
-1 |
hSpCas9 |
negative selection |
9388600 |
119862630 |
119862653 |
2 |
- |
27260156 |
TC71 |
viability |
TACACTTACTGGGTTATCTGTGG |
PTPN4 |
ENSG00000088179 |
0.1750833305304087 |
[435] |
[512,538,469,594] |
4 |
hSpCas9 |
negative selection |
9388601 |
119877344 |
119877367 |
2 |
- |
27260156 |
TC71 |
viability |
CTCTTTAGCTGCTTCCTTATTGG |
PTPN4 |
ENSG00000088179 |
0.3947680746981217 |
[696] |
[1094,995,853,985] |
8 |
hSpCas9 |
negative selection |
9388602 |
119809858 |
119809881 |
2 |
- |
27260156 |
TC32 |
viability |
AGCAGGCAATCGGAAACGTGAGG |
PTPN4 |
ENSG00000088179 |
-0.2402818440539658 |
[1078] |
[821,553,1084,1095] |
-4 |
hSpCas9 |
negative selection |
9445593 |
119809892 |
119809915 |
2 |
+ |
27260156 |
TC32 |
viability |
CAATGTACGAGCATCAGAGTTGG |
PTPN4 |
ENSG00000088179 |
-0.3021189343939644 |
[769] |
[518,544,591,684] |
-5 |
hSpCas9 |
negative selection |
9445594 |
119862577 |
119862600 |
2 |
+ |
27260156 |
TC32 |
viability |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
1.2671823483338613 |
[51] |
[111,117,148,87] |
9 |
hSpCas9 |
negative selection |
9445595 |
119877330 |
119877353 |
2 |
+ |
27260156 |
TC32 |
viability |
TGGATCCAAACAAACCAATAAGG |
PTPN4 |
ENSG00000088179 |
0.06755580585752075 |
[226] |
[162,232,308,191] |
1 |
hSpCas9 |
negative selection |
9509851 |
119862630 |
119862653 |
2 |
- |
27260156 |
TC32 |
viability |
TACACTTACTGGGTTATCTGTGG |
PTPN4 |
ENSG00000088179 |
0.0749273440153641 |
[435] |
[318,448,538,416] |
1 |
hSpCas9 |
negative selection |
9509852 |
119877344 |
119877367 |
2 |
- |
27260156 |
TC32 |
viability |
CTCTTTAGCTGCTTCCTTATTGG |
PTPN4 |
ENSG00000088179 |
0.7444079401133175 |
[696] |
[1044,794,1404,1262] |
9 |
hSpCas9 |
negative selection |
9509853 |
119809875 |
119809898 |
2 |
- |
27869803 |
HPAFII |
viability after 27 days |
ACATTGTAGGTTCTGCCAGCAGG |
PTPN4 |
ENSG00000088179 |
-0.21594685700200134 |
[143] |
[56,71,NaN] |
-2 |
hSpCas9 |
negative selection |
9571487 |
119862577 |
119862600 |
2 |
+ |
27869803 |
HPAFII |
viability after 27 days |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
1.133369501745264 |
[184] |
[172,246,NaN] |
8 |
hSpCas9 |
negative selection |
9571488 |
119882102 |
119882125 |
2 |
- |
27869803 |
HPAFII |
viability after 27 days |
GGCAGCAGTATTAGAAGGACAGG |
PTPN4 |
ENSG00000088179 |
1.466467699357589 |
[160] |
[468,37,NaN] |
9 |
hSpCas9 |
negative selection |
9571489 |
119932515 |
119932538 |
2 |
+ |
27869803 |
HPAFII |
viability after 27 days |
CTTCCATCACGATCTCCACCGGG |
PTPN4 |
ENSG00000088179 |
-0.19249326324785532 |
[180] |
[151,25,NaN] |
-1 |
hSpCas9 |
negative selection |
9571490 |
119934829 |
119934852 |
2 |
- |
27869803 |
HPAFII |
viability after 27 days |
AACTGAAGATGGTCGTAACCGGG |
PTPN4 |
ENSG00000088179 |
-0.27535316002365495 |
[211] |
[54,122,NaN] |
-2 |
hSpCas9 |
negative selection |
9571491 |
119946545 |
119946568 |
2 |
+ |
27869803 |
HPAFII |
viability after 27 days |
ATTGTGTCTCGAGTAGCACCAGG |
PTPN4 |
ENSG00000088179 |
-1.2939873341627057 |
[105] |
[43,4,NaN] |
-7 |
hSpCas9 |
negative selection |
9571492 |
119809875 |
119809898 |
2 |
- |
27869803 |
HPAFII |
viability after 15 days |
ACATTGTAGGTTCTGCCAGCAGG |
PTPN4 |
ENSG00000088179 |
0.044918950446371175 |
[143] |
[216,123,NaN] |
0 |
hSpCas9 |
negative selection |
9653936 |
119862577 |
119862600 |
2 |
+ |
27869803 |
HPAFII |
viability after 15 days |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
0.6355379925223842 |
[184] |
[253,342,NaN] |
7 |
hSpCas9 |
negative selection |
9653937 |
119882102 |
119882125 |
2 |
- |
27869803 |
HPAFII |
viability after 15 days |
GGCAGCAGTATTAGAAGGACAGG |
PTPN4 |
ENSG00000088179 |
0.5295058374499593 |
[160] |
[525,77,NaN] |
6 |
hSpCas9 |
negative selection |
9653938 |
119932515 |
119932538 |
2 |
+ |
27869803 |
HPAFII |
viability after 15 days |
CTTCCATCACGATCTCCACCGGG |
PTPN4 |
ENSG00000088179 |
-0.16059837026943147 |
[180] |
[350,63,NaN] |
-2 |
hSpCas9 |
negative selection |
9653939 |
119934829 |
119934852 |
2 |
- |
27869803 |
HPAFII |
viability after 15 days |
AACTGAAGATGGTCGTAACCGGG |
PTPN4 |
ENSG00000088179 |
-0.5973438590649711 |
[211] |
[120,168,NaN] |
-6 |
hSpCas9 |
negative selection |
9653940 |
119946545 |
119946568 |
2 |
+ |
27869803 |
HPAFII |
viability after 15 days |
ATTGTGTCTCGAGTAGCACCAGG |
PTPN4 |
ENSG00000088179 |
-0.6086605050092841 |
[105] |
[181,7,NaN] |
-6 |
hSpCas9 |
negative selection |
9653941 |
119809875 |
119809898 |
2 |
- |
27869803 |
ASPC1 |
viability after 36 days |
ACATTGTAGGTTCTGCCAGCAGG |
PTPN4 |
ENSG00000088179 |
0.47029939442783875 |
[400] |
[430,45,142] |
5 |
hSpCas9 |
negative selection |
9736385 |
119862577 |
119862600 |
2 |
+ |
27869803 |
ASPC1 |
viability after 36 days |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
0.8561339952634466 |
[504] |
[349,521,132] |
7 |
hSpCas9 |
negative selection |
9736386 |
119882102 |
119882125 |
2 |
- |
27869803 |
ASPC1 |
viability after 36 days |
GGCAGCAGTATTAGAAGGACAGG |
PTPN4 |
ENSG00000088179 |
-0.8943378793473293 |
[243] |
[77,8,51] |
-7 |
hSpCas9 |
negative selection |
9736387 |
119932515 |
119932538 |
2 |
+ |
27869803 |
ASPC1 |
viability after 36 days |
CTTCCATCACGATCTCCACCGGG |
PTPN4 |
ENSG00000088179 |
0.5619329849367343 |
[509] |
[448,86,268] |
5 |
hSpCas9 |
negative selection |
9736388 |
119934829 |
119934852 |
2 |
- |
27869803 |
ASPC1 |
viability after 36 days |
AACTGAAGATGGTCGTAACCGGG |
PTPN4 |
ENSG00000088179 |
-0.5341897516792434 |
[622] |
[27,239,162] |
-5 |
hSpCas9 |
negative selection |
9736389 |
119946545 |
119946568 |
2 |
+ |
27869803 |
ASPC1 |
viability after 36 days |
ATTGTGTCTCGAGTAGCACCAGG |
PTPN4 |
ENSG00000088179 |
-0.9290009074973307 |
[269] |
[26,86,34] |
-7 |
hSpCas9 |
negative selection |
9736390 |
119809875 |
119809898 |
2 |
- |
27869803 |
PATU8988S |
viability after 35 days |
ACATTGTAGGTTCTGCCAGCAGG |
PTPN4 |
ENSG00000088179 |
0.8204318705933119 |
[264] |
[177,198,NaN] |
8 |
hSpCas9 |
negative selection |
9818834 |
119862577 |
119862600 |
2 |
+ |
27869803 |
PATU8988S |
viability after 35 days |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
0.12393918517782172 |
[481] |
[228,193,NaN] |
1 |
hSpCas9 |
negative selection |
9818835 |
119882102 |
119882125 |
2 |
- |
27869803 |
PATU8988S |
viability after 35 days |
GGCAGCAGTATTAGAAGGACAGG |
PTPN4 |
ENSG00000088179 |
0.15102011278588667 |
[297] |
[29,236,NaN] |
1 |
hSpCas9 |
negative selection |
9818836 |
119932515 |
119932538 |
2 |
+ |
27869803 |
PATU8988S |
viability after 35 days |
CTTCCATCACGATCTCCACCGGG |
PTPN4 |
ENSG00000088179 |
-0.5743131465087421 |
[485] |
[112,149,NaN] |
-5 |
hSpCas9 |
negative selection |
9818837 |
119934829 |
119934852 |
2 |
- |
27869803 |
PATU8988S |
viability after 35 days |
AACTGAAGATGGTCGTAACCGGG |
PTPN4 |
ENSG00000088179 |
-0.0964286829897674 |
[523] |
[151,242,NaN] |
-1 |
hSpCas9 |
negative selection |
9818838 |
119946545 |
119946568 |
2 |
+ |
27869803 |
PATU8988S |
viability after 35 days |
ATTGTGTCTCGAGTAGCACCAGG |
PTPN4 |
ENSG00000088179 |
-0.034901216462353224 |
[214] |
[93,74,NaN] |
0 |
hSpCas9 |
negative selection |
9818839 |
119809875 |
119809898 |
2 |
- |
27869803 |
PATU8988S |
viability after 31 days |
ACATTGTAGGTTCTGCCAGCAGG |
PTPN4 |
ENSG00000088179 |
0.34014212834708035 |
[264] |
[142,121,NaN] |
4 |
hSpCas9 |
negative selection |
9901283 |
119862577 |
119862600 |
2 |
+ |
27869803 |
PATU8988S |
viability after 31 days |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
0.17990017273289427 |
[481] |
[211,224,NaN] |
2 |
hSpCas9 |
negative selection |
9901284 |
119882102 |
119882125 |
2 |
- |
27869803 |
PATU8988S |
viability after 31 days |
GGCAGCAGTATTAGAAGGACAGG |
PTPN4 |
ENSG00000088179 |
0.8464095369856052 |
[297] |
[71,393,NaN] |
8 |
hSpCas9 |
negative selection |
9901285 |
119932515 |
119932538 |
2 |
+ |
27869803 |
PATU8988S |
viability after 31 days |
CTTCCATCACGATCTCCACCGGG |
PTPN4 |
ENSG00000088179 |
-0.5831926291690126 |
[485] |
[87,181,NaN] |
-6 |
hSpCas9 |
negative selection |
9901286 |
119934829 |
119934852 |
2 |
- |
27869803 |
PATU8988S |
viability after 31 days |
AACTGAAGATGGTCGTAACCGGG |
PTPN4 |
ENSG00000088179 |
0.2672831661120262 |
[523] |
[199,316,NaN] |
3 |
hSpCas9 |
negative selection |
9901287 |
119946545 |
119946568 |
2 |
+ |
27869803 |
PATU8988S |
viability after 31 days |
ATTGTGTCTCGAGTAGCACCAGG |
PTPN4 |
ENSG00000088179 |
-0.0726563534829543 |
[214] |
[77,85,NaN] |
-1 |
hSpCas9 |
negative selection |
9901288 |
119809875 |
119809898 |
2 |
- |
27869803 |
HPAFII |
viability after 35 days |
ACATTGTAGGTTCTGCCAGCAGG |
PTPN4 |
ENSG00000088179 |
0.39552137369841506 |
[143] |
[117,70,NaN] |
2 |
hSpCas9 |
negative selection |
9983732 |
119862577 |
119862600 |
2 |
+ |
27869803 |
HPAFII |
viability after 35 days |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
1.4567087907501957 |
[184] |
[273,237,NaN] |
8 |
hSpCas9 |
negative selection |
9983733 |
119882102 |
119882125 |
2 |
- |
27869803 |
HPAFII |
viability after 35 days |
GGCAGCAGTATTAGAAGGACAGG |
PTPN4 |
ENSG00000088179 |
1.6616251479596214 |
[160] |
[453,36,NaN] |
9 |
hSpCas9 |
negative selection |
9983734 |
119932515 |
119932538 |
2 |
+ |
27869803 |
HPAFII |
viability after 35 days |
CTTCCATCACGATCTCCACCGGG |
PTPN4 |
ENSG00000088179 |
-0.17214609858449015 |
[180] |
[141,12,NaN] |
-1 |
hSpCas9 |
negative selection |
9983735 |
119934829 |
119934852 |
2 |
- |
27869803 |
HPAFII |
viability after 35 days |
AACTGAAGATGGTCGTAACCGGG |
PTPN4 |
ENSG00000088179 |
-0.5833709122513191 |
[211] |
[33,113,NaN] |
-4 |
hSpCas9 |
negative selection |
9983736 |
119946545 |
119946568 |
2 |
+ |
27869803 |
HPAFII |
viability after 35 days |
ATTGTGTCTCGAGTAGCACCAGG |
PTPN4 |
ENSG00000088179 |
-1.1115876115147294 |
[105] |
[45,0,NaN] |
-6 |
hSpCas9 |
negative selection |
9983737 |
119809875 |
119809898 |
2 |
- |
27869803 |
HPAFII |
viability after 31 days |
ACATTGTAGGTTCTGCCAGCAGG |
PTPN4 |
ENSG00000088179 |
0.04973983338393573 |
[143] |
[86,79,NaN] |
0 |
hSpCas9 |
negative selection |
10066181 |
119862577 |
119862600 |
2 |
+ |
27869803 |
HPAFII |
viability after 31 days |
GCATCTAGATTTGACTGAGCAGG |
PTPN4 |
ENSG00000088179 |
1.322176007273844 |
[184] |
[194,329,NaN] |
8 |
hSpCas9 |
negative selection |
10066182 |
119882102 |
119882125 |
2 |
- |
27869803 |
HPAFII |
viability after 31 days |
GGCAGCAGTATTAGAAGGACAGG |
PTPN4 |
ENSG00000088179 |
1.3121994863789275 |
[160] |
[388,44,NaN] |
8 |
hSpCas9 |
negative selection |
10066183 |
119932515 |
119932538 |
2 |
+ |
27869803 |
HPAFII |
viability after 31 days |
CTTCCATCACGATCTCCACCGGG |
PTPN4 |
ENSG00000088179 |
-0.9192407577879146 |
[180] |
[91,11,NaN] |
-5 |
hSpCas9 |
negative selection |
10066184 |
119934829 |
119934852 |
2 |
- |
27869803 |
HPAFII |
viability after 31 days |
AACTGAAGATGGTCGTAACCGGG |
PTPN4 |
ENSG00000088179 |
-0.6586034225813631 |
[211] |
[38,114,NaN] |
-4 |
hSpCas9 |
negative selection |
10066185 |
119946545 |
119946568 |
2 |
+ |
27869803 |
HPAFII |
viability after 31 days |
ATTGTGTCTCGAGTAGCACCAGG |
PTPN4 |
ENSG00000088179 |
-0.9780726104502249 |
[105] |
[56,0,NaN] |
-6 |
hSpCas9 |
negative selection |
10066186 |
119965637 |
119965660 |
2 |
- |
28162770 |
P31FUJ |
viability |
GGAAAACAGAGTACCTGCAATGG |
PTPN4 |
ENSG00000088179 |
0.19914867780081166 |
[211] |
[285] |
2 |
hSpCas9 |
negative selection |
10219849 |
119965627 |
119965650 |
2 |
- |
28162770 |
P31FUJ |
viability |
GTACCTGCAATGGACAACAACGG |
PTPN4 |
ENSG00000088179 |
-0.10425808379331769 |
[278] |
[304] |
-1 |
hSpCas9 |
negative selection |
10219850 |
119932530 |
119932553 |
2 |
- |
28162770 |
P31FUJ |
viability |
TACTGATTAGGAGTTCCCGGTGG |
PTPN4 |
ENSG00000088179 |
-0.12664865209895648 |
[405] |
[436] |
-1 |
hSpCas9 |
negative selection |
10219851 |
119955257 |
119955280 |
2 |
- |
28162770 |
P31FUJ |
viability |
GCTGGATCATTGACTCCCGCAGG |
PTPN4 |
ENSG00000088179 |
0.6608458144132876 |
[196] |
[365] |
7 |
hSpCas9 |
negative selection |
10219852 |
119809919 |
119809942 |
2 |
+ |
28162770 |
P31FUJ |
viability |
AGACAGACAGCATACTGAAGTGG |
PTPN4 |
ENSG00000088179 |
-0.015210769341751806 |
[128] |
[149] |
0 |
hSpCas9 |
negative selection |
10219853 |
119882101 |
119882124 |
2 |
- |
28162770 |
P31FUJ |
viability |
GCAGCAGTATTAGAAGGACAGGG |
PTPN4 |
ENSG00000088179 |
1.0671833375923065 |
[105] |
[260] |
9 |
hSpCas9 |
negative selection |
10219854 |
119932518 |
119932541 |
2 |
- |
28162770 |
P31FUJ |
viability |
GTTCCCGGTGGAGATCGTGATGG |
PTPN4 |
ENSG00000088179 |
1.0016630492226442 |
[50] |
[119] |
9 |
hSpCas9 |
negative selection |
10219855 |
119945082 |
119945105 |
2 |
+ |
28162770 |
P31FUJ |
viability |
TCACAAGAGACCCCTGGAGATGG |
PTPN4 |
ENSG00000088179 |
0.13589658019759532 |
[260] |
[336] |
1 |
hSpCas9 |
negative selection |
10219856 |
119946539 |
119946562 |
2 |
- |
28162770 |
P31FUJ |
viability |
GCTACTCGAGACACAATCACAGG |
PTPN4 |
ENSG00000088179 |
0.17798582186310738 |
[254] |
[338] |
1 |
hSpCas9 |
negative selection |
10219857 |
119951982 |
119952005 |
2 |
+ |
28162770 |
P31FUJ |
viability |
TGTGTCCCTAGACTGAATGAAGG |
PTPN4 |
ENSG00000088179 |
-1.8177647051355343 |
[2] |
[0] |
-8 |
hSpCas9 |
negative selection |
10219858 |
119965637 |
119965660 |
2 |
- |
28162770 |
TF1 |
viability |
GGAAAACAGAGTACCTGCAATGG |
PTPN4 |
ENSG00000088179 |
NaN |
[NaN] |
[145] |
1 |
hSpCas9 |
negative selection |
10389215 |
119965627 |
119965650 |
2 |
- |
28162770 |
TF1 |
viability |
GTACCTGCAATGGACAACAACGG |
PTPN4 |
ENSG00000088179 |
NaN |
[NaN] |
[118] |
1 |
hSpCas9 |
negative selection |
10389216 |
119932530 |
119932553 |
2 |
- |
28162770 |
TF1 |
viability |
TACTGATTAGGAGTTCCCGGTGG |
PTPN4 |
ENSG00000088179 |
NaN |
[NaN] |
[102] |
1 |
hSpCas9 |
negative selection |
10389217 |
119955257 |
119955280 |
2 |
- |
28162770 |
TF1 |
viability |
GCTGGATCATTGACTCCCGCAGG |
PTPN4 |
ENSG00000088179 |
NaN |
[NaN] |
[161] |
1 |
hSpCas9 |
negative selection |
10389218 |
119809919 |
119809942 |
2 |
+ |
28162770 |
TF1 |
viability |
AGACAGACAGCATACTGAAGTGG |
PTPN4 |
ENSG00000088179 |
NaN |
[NaN] |
[166] |
1 |
hSpCas9 |
negative selection |
10389219 |
119882101 |
119882124 |
2 |
- |
28162770 |
TF1 |
viability |
GCAGCAGTATTAGAAGGACAGGG |
PTPN4 |
ENSG00000088179 |
NaN |
[NaN] |
[119] |
1 |
hSpCas9 |
negative selection |
10389220 |
119932518 |
119932541 |
2 |
- |
28162770 |
TF1 |
viability |
GTTCCCGGTGGAGATCGTGATGG |
PTPN4 |
ENSG00000088179 |
NaN |
[NaN] |
[29] |
1 |
hSpCas9 |
negative selection |
10389221 |
119945082 |
119945105 |
2 |
+ |
28162770 |
TF1 |
viability |
TCACAAGAGACCCCTGGAGATGG |
PTPN4 |
ENSG00000088179 |
NaN |
[NaN] |
[232] |
1 |
hSpCas9 |
negative selection |
10389222 |
119946539 |
119946562 |
2 |
- |
28162770 |
TF1 |
viability |
GCTACTCGAGACACAATCACAGG |
PTPN4 |
ENSG00000088179 |
NaN |
[NaN] |
[293] |
1 |
hSpCas9 |
negative selection |
10389223 |
119951982 |
119952005 |
2 |
+ |
28162770 |
TF1 |
viability |
TGTGTCCCTAGACTGAATGAAGG |
PTPN4 |
ENSG00000088179 |
NaN |
[NaN] |
[8] |
1 |
hSpCas9 |
negative selection |
10389224 |
119965637 |
119965660 |
2 |
- |
28162770 |
SKM1 |
viability |
GGAAAACAGAGTACCTGCAATGG |
PTPN4 |
ENSG00000088179 |
-0.4683647434073049 |
[53] |
[68] |
-4 |
hSpCas9 |
negative selection |
10558581 |
119965627 |
119965650 |
2 |
- |
28162770 |
SKM1 |
viability |
GTACCTGCAATGGACAACAACGG |
PTPN4 |
ENSG00000088179 |
1.0580376779370817 |
[46] |
[172] |
8 |
hSpCas9 |
negative selection |
10558582 |
119932530 |
119932553 |
2 |
- |
28162770 |
SKM1 |
viability |
TACTGATTAGGAGTTCCCGGTGG |
PTPN4 |
ENSG00000088179 |
1.7223188182018045 |
[71] |
[419] |
9 |
hSpCas9 |
negative selection |
10558583 |
119955257 |
119955280 |
2 |
- |
28162770 |
SKM1 |
viability |
GCTGGATCATTGACTCCCGCAGG |
PTPN4 |
ENSG00000088179 |
0.3579073919929291 |
[63] |
[144] |
3 |
hSpCas9 |
negative selection |
10558584 |
119809919 |
119809942 |
2 |
+ |
28162770 |
SKM1 |
viability |
AGACAGACAGCATACTGAAGTGG |
PTPN4 |
ENSG00000088179 |
-0.21933719556739037 |
[53] |
[81] |
-2 |
hSpCas9 |
negative selection |
10558585 |
119882101 |
119882124 |
2 |
- |
28162770 |
SKM1 |
viability |
GCAGCAGTATTAGAAGGACAGGG |
PTPN4 |
ENSG00000088179 |
1.0336083926428197 |
[41] |
[151] |
8 |
hSpCas9 |
negative selection |
10558586 |
119932518 |
119932541 |
2 |
- |
28162770 |
SKM1 |
viability |
GTTCCCGGTGGAGATCGTGATGG |
PTPN4 |
ENSG00000088179 |
-0.302627538928426 |
[29] |
[42] |
-3 |
hSpCas9 |
negative selection |
10558587 |
119945082 |
119945105 |
2 |
+ |
28162770 |
SKM1 |
viability |
TCACAAGAGACCCCTGGAGATGG |
PTPN4 |
ENSG00000088179 |
0.590124205836935 |
[61] |
[164] |
6 |
hSpCas9 |
negative selection |
10558588 |
119946539 |
119946562 |
2 |
- |
28162770 |
SKM1 |
viability |
GCTACTCGAGACACAATCACAGG |
PTPN4 |
ENSG00000088179 |
-0.2256344340285999 |
[83] |
[126] |
-2 |
hSpCas9 |
negative selection |
10558589 |
119951982 |
119952005 |
2 |
+ |
28162770 |
SKM1 |
viability |
TGTGTCCCTAGACTGAATGAAGG |
PTPN4 |
ENSG00000088179 |
-0.8220016980220048 |
[0] |
[0] |
-6 |
hSpCas9 |
negative selection |
10558590 |
119965637 |
119965660 |
2 |
- |
28162770 |
SKM1 |
viability |
GGAAAACAGAGTACCTGCAATGG |
PTPN4 |
ENSG00000088179 |
-0.4683647434073049 |
[53] |
[68] |
-4 |
hSpCas9 |
negative selection |
10727947 |
119965627 |
119965650 |
2 |
- |
28162770 |
SKM1 |
viability |
GTACCTGCAATGGACAACAACGG |
PTPN4 |
ENSG00000088179 |
1.0580376779370817 |
[46] |
[172] |
8 |
hSpCas9 |
negative selection |
10727948 |
119932530 |
119932553 |
2 |
- |
28162770 |
SKM1 |
viability |
TACTGATTAGGAGTTCCCGGTGG |
PTPN4 |
ENSG00000088179 |
1.7223188182018045 |
[71] |
[419] |
9 |
hSpCas9 |
negative selection |
10727949 |
119955257 |
119955280 |
2 |
- |
28162770 |
SKM1 |
viability |
GCTGGATCATTGACTCCCGCAGG |
PTPN4 |
ENSG00000088179 |
0.3579073919929291 |
[63] |
[144] |
3 |
hSpCas9 |
negative selection |
10727950 |
119809919 |
119809942 |
2 |
+ |
28162770 |
SKM1 |
viability |
AGACAGACAGCATACTGAAGTGG |
PTPN4 |
ENSG00000088179 |
-0.21933719556739037 |
[53] |
[81] |
-2 |
hSpCas9 |
negative selection |
10727951 |
119882101 |
119882124 |
2 |
- |
28162770 |
SKM1 |
viability |
GCAGCAGTATTAGAAGGACAGGG |
PTPN4 |
ENSG00000088179 |
1.0336083926428197 |
[41] |
[151] |
8 |
hSpCas9 |
negative selection |
10727952 |
119932518 |
119932541 |
2 |
- |
28162770 |
SKM1 |
viability |
GTTCCCGGTGGAGATCGTGATGG |
PTPN4 |
ENSG00000088179 |
-0.302627538928426 |
[29] |
[42] |
-3 |
hSpCas9 |
negative selection |
10727953 |
119945082 |
119945105 |
2 |
+ |
28162770 |
SKM1 |
viability |
TCACAAGAGACCCCTGGAGATGG |
PTPN4 |
ENSG00000088179 |
0.590124205836935 |
[61] |
[164] |
6 |
hSpCas9 |
negative selection |
10727954 |
119946539 |
119946562 |
2 |
- |
28162770 |
SKM1 |
viability |
GCTACTCGAGACACAATCACAGG |
PTPN4 |
ENSG00000088179 |
-0.2256344340285999 |
[83] |
[126] |
-2 |
hSpCas9 |
negative selection |
10727955 |
119951982 |
119952005 |
2 |
+ |
28162770 |
SKM1 |
viability |
TGTGTCCCTAGACTGAATGAAGG |
PTPN4 |
ENSG00000088179 |
-0.8220016980220048 |
[0] |
[0] |
-6 |
hSpCas9 |
negative selection |
10727956 |
119965637 |
119965660 |
2 |
- |
28162770 |
PL21 |
viability |
GGAAAACAGAGTACCTGCAATGG |
PTPN4 |
ENSG00000088179 |
0.8013427562176872 |
[264] |
[200] |
7 |
hSpCas9 |
negative selection |
10897313 |
119965627 |
119965650 |
2 |
- |
28162770 |
PL21 |
viability |
GTACCTGCAATGGACAACAACGG |
PTPN4 |
ENSG00000088179 |
1.2611690478868796 |
[161] |
[168] |
9 |
hSpCas9 |
negative selection |
10897314 |
119932530 |
119932553 |
2 |
- |
28162770 |
PL21 |
viability |
TACTGATTAGGAGTTCCCGGTGG |
PTPN4 |
ENSG00000088179 |
0.08399801988016709 |
[361] |
[166] |
0 |
hSpCas9 |
negative selection |
10897315 |
119955257 |
119955280 |
2 |
- |
28162770 |
PL21 |
viability |
GCTGGATCATTGACTCCCGCAGG |
PTPN4 |
ENSG00000088179 |
-0.22209338619372765 |
[267] |
[99] |
-2 |
hSpCas9 |
negative selection |
10897316 |
119809919 |
119809942 |
2 |
+ |
28162770 |
PL21 |
viability |
AGACAGACAGCATACTGAAGTGG |
PTPN4 |
ENSG00000088179 |
-0.1921778082894403 |
[188] |
[71] |
-1 |
hSpCas9 |
negative selection |
10897317 |
119882101 |
119882124 |
2 |
- |
28162770 |
PL21 |
viability |
GCAGCAGTATTAGAAGGACAGGG |
PTPN4 |
ENSG00000088179 |
0.7750484505465534 |
[191] |
[142] |
6 |
hSpCas9 |
negative selection |
10897318 |
119932518 |
119932541 |
2 |
- |
28162770 |
PL21 |
viability |
GTTCCCGGTGGAGATCGTGATGG |
PTPN4 |
ENSG00000088179 |
-1.9962575983141835 |
[54] |
[5] |
-8 |
hSpCas9 |
negative selection |
10897319 |
119945082 |
119945105 |
2 |
+ |
28162770 |
PL21 |
viability |
TCACAAGAGACCCCTGGAGATGG |
PTPN4 |
ENSG00000088179 |
0.5895513060926696 |
[141] |
[92] |
5 |
hSpCas9 |
negative selection |
10897320 |
119946539 |
119946562 |
2 |
- |
28162770 |
PL21 |
viability |
GCTACTCGAGACACAATCACAGG |
PTPN4 |
ENSG00000088179 |
0.7458269664770362 |
[210] |
[153] |
6 |
hSpCas9 |
negative selection |
10897321 |
119951982 |
119952005 |
2 |
+ |
28162770 |
PL21 |
viability |
TGTGTCCCTAGACTGAATGAAGG |
PTPN4 |
ENSG00000088179 |
0.20013961448931994 |
[1] |
[0] |
1 |
hSpCas9 |
negative selection |
10897322 |
119965637 |
119965660 |
2 |
- |
28162770 |
P31FUJ |
viability |
GGAAAACAGAGTACCTGCAATGG |
PTPN4 |
ENSG00000088179 |
0.19914867780081166 |
[211] |
[285] |
2 |
hSpCas9 |
negative selection |
11066679 |
119965627 |
119965650 |
2 |
- |
28162770 |
P31FUJ |
viability |
GTACCTGCAATGGACAACAACGG |
PTPN4 |
ENSG00000088179 |
-0.10425808379331769 |
[278] |
[304] |
-1 |
hSpCas9 |
negative selection |
11066680 |
119932530 |
119932553 |
2 |
- |
28162770 |
P31FUJ |
viability |
TACTGATTAGGAGTTCCCGGTGG |
PTPN4 |
ENSG00000088179 |
-0.12664865209895648 |
[405] |
[436] |
-1 |
hSpCas9 |
negative selection |
11066681 |
119955257 |
119955280 |
2 |
- |
28162770 |
P31FUJ |
viability |
GCTGGATCATTGACTCCCGCAGG |
PTPN4 |
ENSG00000088179 |
0.6608458144132876 |
[196] |
[365] |
7 |
hSpCas9 |
negative selection |
11066682 |
119809919 |
119809942 |
2 |
+ |
28162770 |
P31FUJ |
viability |
AGACAGACAGCATACTGAAGTGG |
PTPN4 |
ENSG00000088179 |
-0.015210769341751806 |
[128] |
[149] |
0 |
hSpCas9 |
negative selection |
11066683 |
119882101 |
119882124 |
2 |
- |
28162770 |
P31FUJ |
viability |
GCAGCAGTATTAGAAGGACAGGG |
PTPN4 |
ENSG00000088179 |
1.0671833375923065 |
[105] |
[260] |
9 |
hSpCas9 |
negative selection |
11066684 |
119932518 |
119932541 |
2 |
- |
28162770 |
P31FUJ |
viability |
GTTCCCGGTGGAGATCGTGATGG |
PTPN4 |
ENSG00000088179 |
1.0016630492226442 |
[50] |
[119] |
9 |
hSpCas9 |
negative selection |
11066685 |
119945082 |
119945105 |
2 |
+ |
28162770 |
P31FUJ |
viability |
TCACAAGAGACCCCTGGAGATGG |
PTPN4 |
ENSG00000088179 |
0.13589658019759532 |
[260] |
[336] |
1 |
hSpCas9 |
negative selection |
11066686 |
119946539 |
119946562 |
2 |
- |
28162770 |
P31FUJ |
viability |
GCTACTCGAGACACAATCACAGG |
PTPN4 |
ENSG00000088179 |
0.17798582186310738 |
[254] |
[338] |
1 |
hSpCas9 |
negative selection |
11066687 |
119951982 |
119952005 |
2 |
+ |
28162770 |
P31FUJ |
viability |
TGTGTCCCTAGACTGAATGAAGG |
PTPN4 |
ENSG00000088179 |
-1.8177647051355343 |
[2] |
[0] |
-8 |
hSpCas9 |
negative selection |
11066688 |
119965637 |
119965660 |
2 |
- |
28162770 |
OCIAML5 |
viability |
GGAAAACAGAGTACCTGCAATGG |
PTPN4 |
ENSG00000088179 |
-0.026640075884374947 |
[135] |
[240] |
0 |
hSpCas9 |
negative selection |
11236045 |
119965627 |
119965650 |
2 |
- |
28162770 |
OCIAML5 |
viability |
GTACCTGCAATGGACAACAACGG |
PTPN4 |
ENSG00000088179 |
0.4100963791650517 |
[137] |
[330] |
3 |
hSpCas9 |
negative selection |
11236046 |
119932530 |
119932553 |
2 |
- |
28162770 |
OCIAML5 |
viability |
TACTGATTAGGAGTTCCCGGTGG |
PTPN4 |
ENSG00000088179 |
0.08918084185191344 |
[212] |
[408] |
0 |
hSpCas9 |
negative selection |
11236047 |
119955257 |
119955280 |
2 |
- |
28162770 |
OCIAML5 |
viability |
GCTGGATCATTGACTCCCGCAGG |
PTPN4 |
ENSG00000088179 |
-0.32964553621155357 |
[164] |
[236] |
-2 |
hSpCas9 |
negative selection |
11236048 |
119809919 |
119809942 |
2 |
+ |
28162770 |
OCIAML5 |
viability |
AGACAGACAGCATACTGAAGTGG |
PTPN4 |
ENSG00000088179 |
1.4887205512746815 |
[75] |
[384] |
9 |
hSpCas9 |
negative selection |
11236049 |
119882101 |
119882124 |
2 |
- |
28162770 |
OCIAML5 |
viability |
GCAGCAGTATTAGAAGGACAGGG |
PTPN4 |
ENSG00000088179 |
0.18573546184838735 |
[112] |
[231] |
1 |
hSpCas9 |
negative selection |
11236050 |
119932518 |
119932541 |
2 |
- |
28162770 |
OCIAML5 |
viability |
GTTCCCGGTGGAGATCGTGATGG |
PTPN4 |
ENSG00000088179 |
0.8301931312120743 |
[42] |
[137] |
7 |
hSpCas9 |
negative selection |
11236051 |
119945082 |
119945105 |
2 |
+ |
28162770 |
OCIAML5 |
viability |
TCACAAGAGACCCCTGGAGATGG |
PTPN4 |
ENSG00000088179 |
-0.14617928788323423 |
[121] |
[198] |
-1 |
hSpCas9 |
negative selection |
11236052 |
119946539 |
119946562 |
2 |
- |
28162770 |
OCIAML5 |
viability |
GCTACTCGAGACACAATCACAGG |
PTPN4 |
ENSG00000088179 |
0.7942964745213026 |
[160] |
[503] |
7 |
hSpCas9 |
negative selection |
11236053 |
119951982 |
119952005 |
2 |
+ |
28162770 |
OCIAML5 |
viability |
TGTGTCCCTAGACTGAATGAAGG |
PTPN4 |
ENSG00000088179 |
-0.8520665708639967 |
[0] |
[0] |
-5 |
hSpCas9 |
negative selection |
11236054 |
119965637 |
119965660 |
2 |
- |
28162770 |
EOL1 |
viability |
GGAAAACAGAGTACCTGCAATGG |
PTPN4 |
ENSG00000088179 |
-0.40200188105720536 |
[468] |
[186] |
-3 |
hSpCas9 |
negative selection |
11405411 |
119965627 |
119965650 |
2 |
- |
28162770 |
EOL1 |
viability |
GTACCTGCAATGGACAACAACGG |
PTPN4 |
ENSG00000088179 |
0.26719934546769636 |
[234] |
[148] |
2 |
hSpCas9 |
negative selection |
11405412 |
119932530 |
119932553 |
2 |
- |
28162770 |
EOL1 |
viability |
TACTGATTAGGAGTTCCCGGTGG |
PTPN4 |
ENSG00000088179 |
0.004537869744208445 |
[648] |
[342] |
0 |
hSpCas9 |
negative selection |
11405413 |
119955257 |
119955280 |
2 |
- |
28162770 |
EOL1 |
viability |
GCTGGATCATTGACTCCCGCAGG |
PTPN4 |
ENSG00000088179 |
0.49887872056180405 |
[453] |
[337] |
4 |
hSpCas9 |
negative selection |
11405414 |
119809919 |
119809942 |
2 |
+ |
28162770 |
EOL1 |
viability |
AGACAGACAGCATACTGAAGTGG |
PTPN4 |
ENSG00000088179 |
-0.5510312696433602 |
[291] |
[104] |
-4 |
hSpCas9 |
negative selection |
11405415 |
119882101 |
119882124 |
2 |
- |
28162770 |
EOL1 |
viability |
GCAGCAGTATTAGAAGGACAGGG |
PTPN4 |
ENSG00000088179 |
1.275264289882522 |
[257] |
[328] |
9 |
hSpCas9 |
negative selection |
11405416 |
119932518 |
119932541 |
2 |
- |
28162770 |
EOL1 |
viability |
GTTCCCGGTGGAGATCGTGATGG |
PTPN4 |
ENSG00000088179 |
-0.16084371966011002 |
[86] |
[40] |
-1 |
hSpCas9 |
negative selection |
11405417 |
119945082 |
119945105 |
2 |
+ |
28162770 |
EOL1 |
viability |
TCACAAGAGACCCCTGGAGATGG |
PTPN4 |
ENSG00000088179 |
0.8684046935330009 |
[261] |
[251] |
7 |
hSpCas9 |
negative selection |
11405418 |
119946539 |
119946562 |
2 |
- |
28162770 |
EOL1 |
viability |
GCTACTCGAGACACAATCACAGG |
PTPN4 |
ENSG00000088179 |
0.9703514611836594 |
[247] |
[255] |
8 |
hSpCas9 |
negative selection |
11405419 |
119951982 |
119952005 |
2 |
+ |
28162770 |
EOL1 |
viability |
TGTGTCCCTAGACTGAATGAAGG |
PTPN4 |
ENSG00000088179 |
0.18758217740432848 |
[4] |
[2] |
1 |
hSpCas9 |
negative selection |
11405420 |
119965637 |
119965660 |
2 |
- |
28162770 |
MOLM13 |
viability |
GGAAAACAGAGTACCTGCAATGG |
PTPN4 |
ENSG00000088179 |
0.3850483126069245 |
[447] |
[422] |
3 |
hSpCas9 |
negative selection |
11574777 |
119965627 |
119965650 |
2 |
- |
28162770 |
MOLM13 |
viability |
GTACCTGCAATGGACAACAACGG |
PTPN4 |
ENSG00000088179 |
-0.7627235465968374 |
[351] |
[149] |
-4 |
hSpCas9 |
negative selection |
11574778 |
119932530 |
119932553 |
2 |
- |
28162770 |
MOLM13 |
viability |
TACTGATTAGGAGTTCCCGGTGG |
PTPN4 |
ENSG00000088179 |
0.9182474165564141 |
[463] |
[633] |
7 |
hSpCas9 |
negative selection |
11574779 |
119955257 |
119955280 |
2 |
- |
28162770 |
MOLM13 |
viability |
GCTGGATCATTGACTCCCGCAGG |
PTPN4 |
ENSG00000088179 |
0.6198924749896288 |
[305] |
[339] |
4 |
hSpCas9 |
negative selection |
11574780 |
119809919 |
119809942 |
2 |
+ |
28162770 |
MOLM13 |
viability |
AGACAGACAGCATACTGAAGTGG |
PTPN4 |
ENSG00000088179 |
0.7674496634034866 |
[207] |
[255] |
6 |
hSpCas9 |
negative selection |
11574781 |
119882101 |
119882124 |
2 |
- |
28162770 |
MOLM13 |
viability |
GCAGCAGTATTAGAAGGACAGGG |
PTPN4 |
ENSG00000088179 |
1.7178676345529262 |
[184] |
[439] |
9 |
hSpCas9 |
negative selection |
11574782 |
119932518 |
119932541 |
2 |
- |
28162770 |
MOLM13 |
viability |
GTTCCCGGTGGAGATCGTGATGG |
PTPN4 |
ENSG00000088179 |
0.13446564781938708 |
[62] |
[49] |
0 |
hSpCas9 |
negative selection |
11574783 |
119945082 |
119945105 |
2 |
+ |
28162770 |
MOLM13 |
viability |
TCACAAGAGACCCCTGGAGATGG |
PTPN4 |
ENSG00000088179 |
-0.3341712408435122 |
[203] |
[116] |
-2 |
hSpCas9 |
negative selection |
11574784 |
119946539 |
119946562 |
2 |
- |
28162770 |
MOLM13 |
viability |
GCTACTCGAGACACAATCACAGG |
PTPN4 |
ENSG00000088179 |
-0.2892044141225754 |
[408] |
[241] |
-2 |
hSpCas9 |
negative selection |
11574785 |
119951982 |
119952005 |
2 |
+ |
28162770 |
MOLM13 |
viability |
TGTGTCCCTAGACTGAATGAAGG |
PTPN4 |
ENSG00000088179 |
-2.9915422370927187 |
[10] |
[0] |
-8 |
hSpCas9 |
negative selection |
11574786 |
119965637 |
119965660 |
2 |
- |
28162770 |
HEL |
viability |
GGAAAACAGAGTACCTGCAATGG |
PTPN4 |
ENSG00000088179 |
-0.057198642431262936 |
[358] |
[220] |
0 |
hSpCas9 |
negative selection |
11744143 |
119965627 |
119965650 |
2 |
- |
28162770 |
HEL |
viability |
GTACCTGCAATGGACAACAACGG |
PTPN4 |
ENSG00000088179 |
-0.27897641105158505 |
[268] |
[141] |
-2 |
hSpCas9 |
negative selection |
11744144 |
119932530 |
119932553 |
2 |
- |
28162770 |
HEL |
viability |
TACTGATTAGGAGTTCCCGGTGG |
PTPN4 |
ENSG00000088179 |
0.44430366585444747 |
[427] |
[372] |
4 |
hSpCas9 |
negative selection |
11744145 |
119955257 |
119955280 |
2 |
- |
28162770 |
HEL |
viability |
GCTGGATCATTGACTCCCGCAGG |
PTPN4 |
ENSG00000088179 |
1.4704698900897453 |
[230] |
[409] |
9 |
hSpCas9 |
negative selection |
11744146 |
119809919 |
119809942 |
2 |
+ |
28162770 |
HEL |
viability |
AGACAGACAGCATACTGAAGTGG |
PTPN4 |
ENSG00000088179 |
0.912499101022464 |
[213] |
[257] |
7 |
hSpCas9 |
negative selection |
11744147 |
119882101 |
119882124 |
2 |
- |
28162770 |
HEL |
viability |
GCAGCAGTATTAGAAGGACAGGG |
PTPN4 |
ENSG00000088179 |
0.7591483241156675 |
[237] |
[257] |
6 |
hSpCas9 |
negative selection |
11744148 |
119932518 |
119932541 |
2 |
- |
28162770 |
HEL |
viability |
GTTCCCGGTGGAGATCGTGATGG |
PTPN4 |
ENSG00000088179 |
0.016553668552687695 |
[70] |
[45] |
0 |
hSpCas9 |
negative selection |
11744149 |
119945082 |
119945105 |
2 |
+ |
28162770 |
HEL |
viability |
TCACAAGAGACCCCTGGAGATGG |
PTPN4 |
ENSG00000088179 |
0.7883441542472562 |
[225] |
[249] |
6 |
hSpCas9 |
negative selection |
11744150 |
119946539 |
119946562 |
2 |
- |
28162770 |
HEL |
viability |
GCTACTCGAGACACAATCACAGG |
PTPN4 |
ENSG00000088179 |
-0.927350392239269 |
[385] |
[129] |
-5 |
hSpCas9 |
negative selection |
11744151 |
119951982 |
119952005 |
2 |
+ |
28162770 |
HEL |
viability |
TGTGTCCCTAGACTGAATGAAGG |
PTPN4 |
ENSG00000088179 |
-2.6791892628870055 |
[9] |
[0] |
-8 |
hSpCas9 |
negative selection |
11744152 |
119965637 |
119965660 |
2 |
- |
28162770 |
MV411 |
viability |
GGAAAACAGAGTACCTGCAATGG |
PTPN4 |
ENSG00000088179 |
0.1875246493654542 |
[294] |
[282] |
1 |
hSpCas9 |
negative selection |
11913509 |
119965627 |
119965650 |
2 |
- |
28162770 |
MV411 |
viability |
GTACCTGCAATGGACAACAACGG |
PTPN4 |
ENSG00000088179 |
1.2474375507827753 |
[120] |
[241] |
9 |
hSpCas9 |
negative selection |
11913510 |
119932530 |
119932553 |
2 |
- |
28162770 |
MV411 |
viability |
TACTGATTAGGAGTTCCCGGTGG |
PTPN4 |
ENSG00000088179 |
0.3330825778629538 |
[326] |
[346] |
3 |
hSpCas9 |
negative selection |
11913511 |
119955257 |
119955280 |
2 |
- |
28162770 |
MV411 |
viability |
GCTGGATCATTGACTCCCGCAGG |
PTPN4 |
ENSG00000088179 |
0.27390976214396623 |
[215] |
[219] |
2 |
hSpCas9 |
negative selection |
11913512 |
119809919 |
119809942 |
2 |
+ |
28162770 |
MV411 |
viability |
AGACAGACAGCATACTGAAGTGG |
PTPN4 |
ENSG00000088179 |
0.2174843286811476 |
[145] |
[142] |
2 |
hSpCas9 |
negative selection |
11913513 |
119882101 |
119882124 |
2 |
- |
28162770 |
MV411 |
viability |
GCAGCAGTATTAGAAGGACAGGG |
PTPN4 |
ENSG00000088179 |
1.2235117115372949 |
[151] |
[298] |
9 |
hSpCas9 |
negative selection |
11913514 |
119932518 |
119932541 |
2 |
- |
28162770 |
MV411 |
viability |
GTTCCCGGTGGAGATCGTGATGG |
PTPN4 |
ENSG00000088179 |
0.10447959694073239 |
[52] |
[47] |
0 |
hSpCas9 |
negative selection |
11913515 |
119945082 |
119945105 |
2 |
+ |
28162770 |
MV411 |
viability |
TCACAAGAGACCCCTGGAGATGG |
PTPN4 |
ENSG00000088179 |
0.4140874201922266 |
[146] |
[164] |
3 |
hSpCas9 |
negative selection |
11913516 |
119946539 |
119946562 |
2 |
- |
28162770 |
MV411 |
viability |
GCTACTCGAGACACAATCACAGG |
PTPN4 |
ENSG00000088179 |
0.28733027790628796 |
[213] |
[219] |
2 |
hSpCas9 |
negative selection |
11913517 |
119951982 |
119952005 |
2 |
+ |
28162770 |
MV411 |
viability |
TGTGTCCCTAGACTGAATGAAGG |
PTPN4 |
ENSG00000088179 |
-2.559917371274829 |
[6] |
[0] |
-9 |
hSpCas9 |
negative selection |
11913518 |
119965637 |
119965660 |
2 |
- |
28162770 |
MONOMAC1 |
viability |
GGAAAACAGAGTACCTGCAATGG |
PTPN4 |
ENSG00000088179 |
-0.6850537916955031 |
[222] |
[158] |
-5 |
hSpCas9 |
negative selection |
12082875 |
119965627 |
119965650 |
2 |
- |
28162770 |
MONOMAC1 |
viability |
GTACCTGCAATGGACAACAACGG |
PTPN4 |
ENSG00000088179 |
0.3123280347674433 |
[110] |
[157] |
3 |
hSpCas9 |
negative selection |
12082876 |
119932530 |
119932553 |
2 |
- |
28162770 |
MONOMAC1 |
viability |
TACTGATTAGGAGTTCCCGGTGG |
PTPN4 |
ENSG00000088179 |
0.45444084804137086 |
[218] |
[343] |
4 |
hSpCas9 |
negative selection |
12082877 |
119955257 |
119955280 |
2 |
- |
28162770 |
MONOMAC1 |
viability |
GCTGGATCATTGACTCCCGCAGG |
PTPN4 |
ENSG00000088179 |
-0.13606882976812662 |
[138] |
[144] |
-1 |
hSpCas9 |
negative selection |
12082878 |
119809919 |
119809942 |
2 |
+ |
28162770 |
MONOMAC1 |
viability |
AGACAGACAGCATACTGAAGTGG |
PTPN4 |
ENSG00000088179 |
-0.11573674495770574 |
[137] |
[145] |
-1 |
hSpCas9 |
negative selection |
12082879 |
119882101 |
119882124 |
2 |
- |
28162770 |
MONOMAC1 |
viability |
GCAGCAGTATTAGAAGGACAGGG |
PTPN4 |
ENSG00000088179 |
0.5619550534366513 |
[103] |
[175] |
5 |
hSpCas9 |
negative selection |
12082880 |
119932518 |
119932541 |
2 |
- |
28162770 |
MONOMAC1 |
viability |
GTTCCCGGTGGAGATCGTGATGG |
PTPN4 |
ENSG00000088179 |
1.5684978993034235 |
[19] |
[67] |
9 |
hSpCas9 |
negative selection |
12082881 |
119945082 |
119945105 |
2 |
+ |
28162770 |
MONOMAC1 |
viability |
TCACAAGAGACCCCTGGAGATGG |
PTPN4 |
ENSG00000088179 |
0.026927994095647792 |
[130] |
[152] |
0 |
hSpCas9 |
negative selection |
12082882 |
119946539 |
119946562 |
2 |
- |
28162770 |
MONOMAC1 |
viability |
GCTACTCGAGACACAATCACAGG |
PTPN4 |
ENSG00000088179 |
-1.0450337536145038 |
[134] |
[74] |
-7 |
hSpCas9 |
negative selection |
12082883 |
119951982 |
119952005 |
2 |
+ |
28162770 |
MONOMAC1 |
viability |
TGTGTCCCTAGACTGAATGAAGG |
PTPN4 |
ENSG00000088179 |
-0.19703684705955382 |
[0] |
[0] |
-2 |
hSpCas9 |
negative selection |
12082884 |
119965637 |
119965660 |
2 |
- |
28162770 |
OCIAML2 |
viability |
GGAAAACAGAGTACCTGCAATGG |
PTPN4 |
ENSG00000088179 |
-0.004311821019624018 |
[56] |
[314] |
0 |
hSpCas9 |
negative selection |
12252241 |
119965627 |
119965650 |
2 |
- |
28162770 |
OCIAML2 |
viability |
GTACCTGCAATGGACAACAACGG |
PTPN4 |
ENSG00000088179 |
0.8572970102666442 |
[23] |
[240] |
8 |
hSpCas9 |
negative selection |
12252242 |
119932530 |
119932553 |
2 |
- |
28162770 |
OCIAML2 |
viability |
TACTGATTAGGAGTTCCCGGTGG |
PTPN4 |
ENSG00000088179 |
0.9099741769728087 |
[52] |
[551] |
8 |
hSpCas9 |
negative selection |
12252243 |
119955257 |
119955280 |
2 |
- |
28162770 |
OCIAML2 |
viability |
GCTGGATCATTGACTCCCGCAGG |
PTPN4 |
ENSG00000088179 |
0.8451460426636059 |
[46] |
[467] |
7 |
hSpCas9 |
negative selection |
12252244 |
119809919 |
119809942 |
2 |
+ |
28162770 |
OCIAML2 |
viability |
AGACAGACAGCATACTGAAGTGG |
PTPN4 |
ENSG00000088179 |
0.3553407749827899 |
[43] |
[311] |
3 |
hSpCas9 |
negative selection |
12252245 |
119882101 |
119882124 |
2 |
- |
28162770 |
OCIAML2 |
viability |
GCAGCAGTATTAGAAGGACAGGG |
PTPN4 |
ENSG00000088179 |
1.2196856756252237 |
[32] |
[425] |
9 |
hSpCas9 |
negative selection |
12252246 |
119932518 |
119932541 |
2 |
- |
28162770 |
OCIAML2 |
viability |
GTTCCCGGTGGAGATCGTGATGG |
PTPN4 |
ENSG00000088179 |
-1.0783124024634008 |
[7] |
[20] |
-6 |
hSpCas9 |
negative selection |
12252247 |
119945082 |
119945105 |
2 |
+ |
28162770 |
OCIAML2 |
viability |
TCACAAGAGACCCCTGGAGATGG |
PTPN4 |
ENSG00000088179 |
0.67621156308711 |
[34] |
[309] |
6 |
hSpCas9 |
negative selection |
12252248 |
119946539 |
119946562 |
2 |
- |
28162770 |
OCIAML2 |
viability |
GCTACTCGAGACACAATCACAGG |
PTPN4 |
ENSG00000088179 |
0.4640439268798954 |
[47] |
[366] |
4 |
hSpCas9 |
negative selection |
12252249 |
119951982 |
119952005 |
2 |
+ |
28162770 |
OCIAML2 |
viability |
TGTGTCCCTAGACTGAATGAAGG |
PTPN4 |
ENSG00000088179 |
-1.4706298252421615 |
[0] |
[1] |
-7 |
hSpCas9 |
negative selection |
12252250 |
119965637 |
119965660 |
2 |
- |
28162770 |
OCIAML3 |
viability |
GGAAAACAGAGTACCTGCAATGG |
PTPN4 |
ENSG00000088179 |
0.7234745495320071 |
[64] |
[323] |
6 |
hSpCas9 |
negative selection |
12421607 |
119965627 |
119965650 |
2 |
- |
28162770 |
OCIAML3 |
viability |
GTACCTGCAATGGACAACAACGG |
PTPN4 |
ENSG00000088179 |
-0.04968712410035281 |
[35] |
[104] |
0 |
hSpCas9 |
negative selection |
12421608 |
119932530 |
119932553 |
2 |
- |
28162770 |
OCIAML3 |
viability |
TACTGATTAGGAGTTCCCGGTGG |
PTPN4 |
ENSG00000088179 |
-0.10858081315392143 |
[109] |
[307] |
-1 |
hSpCas9 |
negative selection |
12421609 |
119955257 |
119955280 |
2 |
- |
28162770 |
OCIAML3 |
viability |
GCTGGATCATTGACTCCCGCAGG |
PTPN4 |
ENSG00000088179 |
1.2607944441359011 |
[46] |
[339] |
9 |
hSpCas9 |
negative selection |
12421610 |
119809919 |
119809942 |
2 |
+ |
28162770 |
OCIAML3 |
viability |
AGACAGACAGCATACTGAAGTGG |
PTPN4 |
ENSG00000088179 |
0.8998069723387977 |
[48] |
[275] |
7 |
hSpCas9 |
negative selection |
12421611 |
119882101 |
119882124 |
2 |
- |
28162770 |
OCIAML3 |
viability |
GCAGCAGTATTAGAAGGACAGGG |
PTPN4 |
ENSG00000088179 |
1.03277503609162 |
[50] |
[314] |
8 |
hSpCas9 |
negative selection |
12421612 |
119932518 |
119932541 |
2 |
- |
28162770 |
OCIAML3 |
viability |
GTTCCCGGTGGAGATCGTGATGG |
PTPN4 |
ENSG00000088179 |
-1.030106755130837 |
[22] |
[33] |
-6 |
hSpCas9 |
negative selection |
12421613 |
119945082 |
119945105 |
2 |
+ |
28162770 |
OCIAML3 |
viability |
TCACAAGAGACCCCTGGAGATGG |
PTPN4 |
ENSG00000088179 |
0.09630786054322149 |
[43] |
[141] |
0 |
hSpCas9 |
negative selection |
12421614 |
119946539 |
119946562 |
2 |
- |
28162770 |
OCIAML3 |
viability |
GCTACTCGAGACACAATCACAGG |
PTPN4 |
ENSG00000088179 |
0.06203795845847565 |
[65] |
[207] |
0 |
hSpCas9 |
negative selection |
12421615 |
119951982 |
119952005 |
2 |
+ |
28162770 |
OCIAML3 |
viability |
TGTGTCCCTAGACTGAATGAAGG |
PTPN4 |
ENSG00000088179 |
-2.594007640324163 |
[1] |
[0] |
-9 |
hSpCas9 |
negative selection |
12421616 |