3224028 |
3224051 |
4 |
+ |
26472758 |
Jiyoye |
viability |
GGAGCAAGAGATTCAAGCAATGG |
HTT |
ENSG00000197386 |
2.622188272476724 |
[13] |
[64] |
9 |
hSpCas9 |
negative selection |
75341 |
3132665 |
3132688 |
4 |
+ |
26472758 |
Jiyoye |
viability |
CAGCAGGTCCCGCTTCCACGTGG |
HTT |
ENSG00000197386 |
0.18261512348671516 |
[110] |
[94] |
1 |
hSpCas9 |
negative selection |
75342 |
3235669 |
3235692 |
4 |
- |
26472758 |
Jiyoye |
viability |
CCAGCGATTCTGCATCCAGGCGG |
HTT |
ENSG00000197386 |
-0.49189570964334584 |
[68] |
[36] |
-4 |
hSpCas9 |
negative selection |
75343 |
3074961 |
3074984 |
4 |
- |
26472758 |
Jiyoye |
viability |
TGAGGAAGCTGAGGAGGCGGCGG |
HTT |
ENSG00000197386 |
-0.1907261749227811 |
[55] |
[36] |
-1 |
hSpCas9 |
negative selection |
75344 |
3105365 |
3105388 |
4 |
- |
26472758 |
Jiyoye |
viability |
GGGCAGCACGCAAACTCCGAGGG |
HTT |
ENSG00000197386 |
0.09683526089372274 |
[61] |
[49] |
0 |
hSpCas9 |
negative selection |
75345 |
3127339 |
3127362 |
4 |
+ |
26472758 |
Jiyoye |
viability |
ACATCATCACAGAACAGCCACGG |
HTT |
ENSG00000197386 |
-0.5403571985999909 |
[215] |
[111] |
-4 |
hSpCas9 |
negative selection |
75346 |
3130004 |
3130027 |
4 |
+ |
26472758 |
Jiyoye |
viability |
TCTTCCTGATGAAGCCTCGGAGG |
HTT |
ENSG00000197386 |
-0.7448277119391766 |
[199] |
[89] |
-5 |
hSpCas9 |
negative selection |
75347 |
3131684 |
3131707 |
4 |
- |
26472758 |
Jiyoye |
viability |
CAGCTGCTCCCACACAGCTGAGG |
HTT |
ENSG00000197386 |
1.2872147574649606 |
[93] |
[172] |
7 |
hSpCas9 |
negative selection |
75348 |
3132609 |
3132632 |
4 |
- |
26472758 |
Jiyoye |
viability |
GCAGTGGCTCCTCGAACCTGTGG |
HTT |
ENSG00000197386 |
-0.35962544220109594 |
[227] |
[133] |
-3 |
hSpCas9 |
negative selection |
75349 |
3132625 |
3132648 |
4 |
- |
26472758 |
Jiyoye |
viability |
GGTCCCACAGAGAATGGCAGTGG |
HTT |
ENSG00000197386 |
-0.7448277119391764 |
[79] |
[35] |
-5 |
hSpCas9 |
negative selection |
75350 |
3224028 |
3224051 |
4 |
+ |
26472758 |
KBM7 |
viability |
GGAGCAAGAGATTCAAGCAATGG |
HTT |
ENSG00000197386 |
-1.2466328666398356 |
[388,242] |
[71,51] |
-7 |
hSpCas9 |
negative selection |
266459 |
3132665 |
3132688 |
4 |
+ |
26472758 |
KBM7 |
viability |
CAGCAGGTCCCGCTTCCACGTGG |
HTT |
ENSG00000197386 |
0.12659284541070576 |
[642,394] |
[266,255] |
1 |
hSpCas9 |
negative selection |
266460 |
3235669 |
3235692 |
4 |
- |
26472758 |
KBM7 |
viability |
CCAGCGATTCTGCATCCAGGCGG |
HTT |
ENSG00000197386 |
0.09269825473198579 |
[341,130] |
[127,100] |
0 |
hSpCas9 |
negative selection |
266461 |
3074961 |
3074984 |
4 |
- |
26472758 |
KBM7 |
viability |
TGAGGAAGCTGAGGAGGCGGCGG |
HTT |
ENSG00000197386 |
-1.2774254665019145 |
[207,186] |
[13,59] |
-7 |
hSpCas9 |
negative selection |
266462 |
3105365 |
3105388 |
4 |
- |
26472758 |
KBM7 |
viability |
GGGCAGCACGCAAACTCCGAGGG |
HTT |
ENSG00000197386 |
-0.8641535296992666 |
[477,279] |
[71,116] |
-6 |
hSpCas9 |
negative selection |
266463 |
3127339 |
3127362 |
4 |
+ |
26472758 |
KBM7 |
viability |
ACATCATCACAGAACAGCCACGG |
HTT |
ENSG00000197386 |
0.14506435324437694 |
[640,468] |
[447,139] |
1 |
hSpCas9 |
negative selection |
266464 |
3130004 |
3130027 |
4 |
+ |
26472758 |
KBM7 |
viability |
TCTTCCTGATGAAGCCTCGGAGG |
HTT |
ENSG00000197386 |
0.049477437102356414 |
[736,616] |
[298,353] |
0 |
hSpCas9 |
negative selection |
266465 |
3131684 |
3131707 |
4 |
- |
26472758 |
KBM7 |
viability |
CAGCTGCTCCCACACAGCTGAGG |
HTT |
ENSG00000197386 |
1.1555135244896346 |
[556,461] |
[631,440] |
9 |
hSpCas9 |
negative selection |
266466 |
3132609 |
3132632 |
4 |
- |
26472758 |
KBM7 |
viability |
GCAGTGGCTCCTCGAACCTGTGG |
HTT |
ENSG00000197386 |
0.0012568275464550638 |
[849,716] |
[370,363] |
0 |
hSpCas9 |
negative selection |
266467 |
3132625 |
3132648 |
4 |
- |
26472758 |
KBM7 |
viability |
GGTCCCACAGAGAATGGCAGTGG |
HTT |
ENSG00000197386 |
-1.901515005001033 |
[430,331] |
[54,40] |
-8 |
hSpCas9 |
negative selection |
266468 |
3224028 |
3224051 |
4 |
+ |
26472758 |
Raji |
viability |
GGAGCAAGAGATTCAAGCAATGG |
HTT |
ENSG00000197386 |
0.0004683314570875785 |
[167] |
[38] |
0 |
hSpCas9 |
negative selection |
457577 |
3132665 |
3132688 |
4 |
+ |
26472758 |
Raji |
viability |
CAGCAGGTCCCGCTTCCACGTGG |
HTT |
ENSG00000197386 |
0.5726067918206601 |
[225] |
[77] |
5 |
hSpCas9 |
negative selection |
457578 |
3235669 |
3235692 |
4 |
- |
26472758 |
Raji |
viability |
CCAGCGATTCTGCATCCAGGCGG |
HTT |
ENSG00000197386 |
1.0788143831768287 |
[101] |
[49] |
8 |
hSpCas9 |
negative selection |
457579 |
3074961 |
3074984 |
4 |
- |
26472758 |
Raji |
viability |
TGAGGAAGCTGAGGAGGCGGCGG |
HTT |
ENSG00000197386 |
-1.4574010834099265 |
[141] |
[11] |
-7 |
hSpCas9 |
negative selection |
457580 |
3105365 |
3105388 |
4 |
- |
26472758 |
Raji |
viability |
GGGCAGCACGCAAACTCCGAGGG |
HTT |
ENSG00000197386 |
0.1940951685669301 |
[112] |
[29] |
1 |
hSpCas9 |
negative selection |
457581 |
3127339 |
3127362 |
4 |
+ |
26472758 |
Raji |
viability |
ACATCATCACAGAACAGCCACGG |
HTT |
ENSG00000197386 |
-0.16563495903281655 |
[231] |
[47] |
-1 |
hSpCas9 |
negative selection |
457582 |
3130004 |
3130027 |
4 |
+ |
26472758 |
Raji |
viability |
TCTTCCTGATGAAGCCTCGGAGG |
HTT |
ENSG00000197386 |
-0.0071024796432865855 |
[484] |
[111] |
0 |
hSpCas9 |
negative selection |
457583 |
3131684 |
3131707 |
4 |
- |
26472758 |
Raji |
viability |
CAGCTGCTCCCACACAGCTGAGG |
HTT |
ENSG00000197386 |
0.6639376209090015 |
[358] |
[131] |
6 |
hSpCas9 |
negative selection |
457584 |
3132609 |
3132632 |
4 |
- |
26472758 |
Raji |
viability |
GCAGTGGCTCCTCGAACCTGTGG |
HTT |
ENSG00000197386 |
-0.4969442902144877 |
[449] |
[73] |
-4 |
hSpCas9 |
negative selection |
457585 |
3132625 |
3132648 |
4 |
- |
26472758 |
Raji |
viability |
GGTCCCACAGAGAATGGCAGTGG |
HTT |
ENSG00000197386 |
-0.9265637965497382 |
[171] |
[20] |
-6 |
hSpCas9 |
negative selection |
457586 |
3224028 |
3224051 |
4 |
+ |
26472758 |
K562 |
viability |
GGAGCAAGAGATTCAAGCAATGG |
HTT |
ENSG00000197386 |
1.9078735367069024 |
[154] |
[490] |
9 |
hSpCas9 |
negative selection |
648695 |
3132665 |
3132688 |
4 |
+ |
26472758 |
K562 |
viability |
CAGCAGGTCCCGCTTCCACGTGG |
HTT |
ENSG00000197386 |
1.0899848079666348 |
[329] |
[592] |
8 |
hSpCas9 |
negative selection |
648696 |
3235669 |
3235692 |
4 |
- |
26472758 |
K562 |
viability |
CCAGCGATTCTGCATCCAGGCGG |
HTT |
ENSG00000197386 |
-0.13021641755175972 |
[222] |
[171] |
-1 |
hSpCas9 |
negative selection |
648697 |
3074961 |
3074984 |
4 |
- |
26472758 |
K562 |
viability |
TGAGGAAGCTGAGGAGGCGGCGG |
HTT |
ENSG00000197386 |
-1.0266084689208776 |
[180] |
[74] |
-5 |
hSpCas9 |
negative selection |
648698 |
3105365 |
3105388 |
4 |
- |
26472758 |
K562 |
viability |
GGGCAGCACGCAAACTCCGAGGG |
HTT |
ENSG00000197386 |
-0.43228634168228475 |
[210] |
[131] |
-3 |
hSpCas9 |
negative selection |
648699 |
3127339 |
3127362 |
4 |
+ |
26472758 |
K562 |
viability |
ACATCATCACAGAACAGCCACGG |
HTT |
ENSG00000197386 |
1.2145172419525851 |
[389] |
[763] |
8 |
hSpCas9 |
negative selection |
648700 |
3130004 |
3130027 |
4 |
+ |
26472758 |
K562 |
viability |
TCTTCCTGATGAAGCCTCGGAGG |
HTT |
ENSG00000197386 |
0.5633063682337581 |
[569] |
[710] |
4 |
hSpCas9 |
negative selection |
648701 |
3131684 |
3131707 |
4 |
- |
26472758 |
K562 |
viability |
CAGCTGCTCCCACACAGCTGAGG |
HTT |
ENSG00000197386 |
1.0668245053295369 |
[612] |
[1083] |
8 |
hSpCas9 |
negative selection |
648702 |
3132609 |
3132632 |
4 |
- |
26472758 |
K562 |
viability |
GCAGTGGCTCCTCGAACCTGTGG |
HTT |
ENSG00000197386 |
0.06754096558236766 |
[597] |
[528] |
0 |
hSpCas9 |
negative selection |
648703 |
3132625 |
3132648 |
4 |
- |
26472758 |
K562 |
viability |
GGTCCCACAGAGAATGGCAGTGG |
HTT |
ENSG00000197386 |
0.5209996653381884 |
[264] |
[320] |
4 |
hSpCas9 |
negative selection |
648704 |
3099340 |
3099363 |
4 |
+ |
26627737 |
DLD1 |
viability |
CGCAGAGTCAGATGTCAGGATGG |
HTT |
ENSG00000197386 |
-0.43032320992726725 |
[811] |
[226,186,155] |
-4 |
hSpCas9 |
negative selection |
824939 |
3105386 |
3105409 |
4 |
- |
26627737 |
DLD1 |
viability |
CCAGCTCAGCAAACCTCCACAGG |
HTT |
ENSG00000197386 |
-0.7862783830112714 |
[901] |
[158,140,185] |
-6 |
hSpCas9 |
negative selection |
824940 |
3107291 |
3107314 |
4 |
- |
26627737 |
DLD1 |
viability |
GGCACGGCAGAAGGTTCACCAGG |
HTT |
ENSG00000197386 |
2.2609908461690056 |
[35] |
[86,40,35] |
9 |
hSpCas9 |
negative selection |
824941 |
3115349 |
3115372 |
4 |
+ |
26627737 |
DLD1 |
viability |
ACCATTCGGCGGACAGCGGCTGG |
HTT |
ENSG00000197386 |
-0.9190258295294715 |
[388] |
[102,57,35] |
-7 |
hSpCas9 |
negative selection |
824944 |
3116199 |
3116222 |
4 |
+ |
26627737 |
DLD1 |
viability |
AAGGCAGCTTCGGAGTGACAAGG |
HTT |
ENSG00000197386 |
-0.9342401278351385 |
[282] |
[7,128,10] |
-7 |
hSpCas9 |
negative selection |
824945 |
3121365 |
3121388 |
4 |
+ |
26627737 |
DLD1 |
viability |
GCAGCTCACCGCTGCTAAGGAGG |
HTT |
ENSG00000197386 |
0.15935204632840028 |
[213] |
[86,110,33] |
1 |
hSpCas9 |
negative selection |
824946 |
3099340 |
3099363 |
4 |
+ |
26627737 |
GBM cells |
viability after 5 days |
CGCAGAGTCAGATGTCAGGATGG |
HTT |
ENSG00000197386 |
-0.04611966589638583 |
[514] |
[241,292] |
0 |
hSpCas9 |
negative selection |
907254 |
3105386 |
3105409 |
4 |
- |
26627737 |
GBM cells |
viability after 5 days |
CCAGCTCAGCAAACCTCCACAGG |
HTT |
ENSG00000197386 |
-0.004301062579434856 |
[489] |
[195,327] |
0 |
hSpCas9 |
negative selection |
907255 |
3107291 |
3107314 |
4 |
- |
26627737 |
GBM cells |
viability after 5 days |
GGCACGGCAGAAGGTTCACCAGG |
HTT |
ENSG00000197386 |
-0.8975527310291822 |
[32] |
[8,9] |
-8 |
hSpCas9 |
negative selection |
907256 |
3115349 |
3115372 |
4 |
+ |
26627737 |
GBM cells |
viability after 5 days |
ACCATTCGGCGGACAGCGGCTGG |
HTT |
ENSG00000197386 |
0.5354066762469237 |
[109] |
[65,104] |
7 |
hSpCas9 |
negative selection |
907259 |
3116199 |
3116222 |
4 |
+ |
26627737 |
GBM cells |
viability after 5 days |
AAGGCAGCTTCGGAGTGACAAGG |
HTT |
ENSG00000197386 |
0.16968392949908462 |
[154] |
[100,85] |
2 |
hSpCas9 |
negative selection |
907260 |
3121365 |
3121388 |
4 |
+ |
26627737 |
GBM cells |
viability after 5 days |
GCAGCTCACCGCTGCTAAGGAGG |
HTT |
ENSG00000197386 |
0.09921252537151659 |
[93] |
[48,58] |
1 |
hSpCas9 |
negative selection |
907261 |
3099340 |
3099363 |
4 |
+ |
26627737 |
GBM cells |
viability after 13 days |
CGCAGAGTCAGATGTCAGGATGG |
HTT |
ENSG00000197386 |
-0.8607793930652423 |
[514] |
[165,143] |
-7 |
hSpCas9 |
negative selection |
989569 |
3105386 |
3105409 |
4 |
- |
26627737 |
GBM cells |
viability after 13 days |
CCAGCTCAGCAAACCTCCACAGG |
HTT |
ENSG00000197386 |
-0.49375243846725175 |
[489] |
[222,160] |
-5 |
hSpCas9 |
negative selection |
989570 |
3107291 |
3107314 |
4 |
- |
26627737 |
GBM cells |
viability after 13 days |
GGCACGGCAGAAGGTTCACCAGG |
HTT |
ENSG00000197386 |
-3.5286546483231596 |
[32] |
[0,1] |
-9 |
hSpCas9 |
negative selection |
989571 |
3115349 |
3115372 |
4 |
+ |
26627737 |
GBM cells |
viability after 13 days |
ACCATTCGGCGGACAGCGGCTGG |
HTT |
ENSG00000197386 |
0.07633853242693767 |
[109] |
[52,70] |
1 |
hSpCas9 |
negative selection |
989574 |
3116199 |
3116222 |
4 |
+ |
26627737 |
GBM cells |
viability after 13 days |
AAGGCAGCTTCGGAGTGACAAGG |
HTT |
ENSG00000197386 |
-0.17030346289277454 |
[154] |
[98,54] |
-2 |
hSpCas9 |
negative selection |
989575 |
3121365 |
3121388 |
4 |
+ |
26627737 |
GBM cells |
viability after 13 days |
GCAGCTCACCGCTGCTAAGGAGG |
HTT |
ENSG00000197386 |
0.7162913369743218 |
[93] |
[85,81] |
8 |
hSpCas9 |
negative selection |
989576 |
3099340 |
3099363 |
4 |
+ |
26627737 |
GBM cells |
viability after 21 days |
CGCAGAGTCAGATGTCAGGATGG |
HTT |
ENSG00000197386 |
-0.4922152657736154 |
[514] |
[200,196] |
-4 |
hSpCas9 |
negative selection |
1071884 |
3105386 |
3105409 |
4 |
- |
26627737 |
GBM cells |
viability after 21 days |
CCAGCTCAGCAAACCTCCACAGG |
HTT |
ENSG00000197386 |
-1.208407732831962 |
[489] |
[133,97] |
-7 |
hSpCas9 |
negative selection |
1071885 |
3107291 |
3107314 |
4 |
- |
26627737 |
GBM cells |
viability after 21 days |
GGCACGGCAGAAGGTTCACCAGG |
HTT |
ENSG00000197386 |
-0.365995069139851 |
[32] |
[15,11] |
-3 |
hSpCas9 |
negative selection |
1071886 |
3115349 |
3115372 |
4 |
+ |
26627737 |
GBM cells |
viability after 21 days |
ACCATTCGGCGGACAGCGGCTGG |
HTT |
ENSG00000197386 |
0.1723606169697789 |
[109] |
[70,63] |
1 |
hSpCas9 |
negative selection |
1071889 |
3116199 |
3116222 |
4 |
+ |
26627737 |
GBM cells |
viability after 21 days |
AAGGCAGCTTCGGAGTGACAAGG |
HTT |
ENSG00000197386 |
0.06990201323015632 |
[154] |
[90,85] |
0 |
hSpCas9 |
negative selection |
1071890 |
3121365 |
3121388 |
4 |
+ |
26627737 |
GBM cells |
viability after 21 days |
GCAGCTCACCGCTGCTAAGGAGG |
HTT |
ENSG00000197386 |
-0.07114134678460005 |
[93] |
[45,50] |
0 |
hSpCas9 |
negative selection |
1071891 |
3099340 |
3099363 |
4 |
+ |
26627737 |
RPE1 |
viability after 9 days |
CGCAGAGTCAGATGTCAGGATGG |
HTT |
ENSG00000197386 |
1.8369116131099794 |
[575] |
[624,668] |
8 |
hSpCas9 |
negative selection |
1154199 |
3105386 |
3105409 |
4 |
- |
26627737 |
RPE1 |
viability after 9 days |
CCAGCTCAGCAAACCTCCACAGG |
HTT |
ENSG00000197386 |
-0.12779901920071696 |
[910] |
[119,442] |
-1 |
hSpCas9 |
negative selection |
1154200 |
3107291 |
3107314 |
4 |
- |
26627737 |
RPE1 |
viability after 9 days |
GGCACGGCAGAAGGTTCACCAGG |
HTT |
ENSG00000197386 |
1.5142194533549191 |
[68] |
[7,130] |
8 |
hSpCas9 |
negative selection |
1154201 |
3115349 |
3115372 |
4 |
+ |
26627737 |
RPE1 |
viability after 9 days |
ACCATTCGGCGGACAGCGGCTGG |
HTT |
ENSG00000197386 |
1.2074469740661735 |
[244] |
[84,295] |
7 |
hSpCas9 |
negative selection |
1154204 |
3116199 |
3116222 |
4 |
+ |
26627737 |
RPE1 |
viability after 9 days |
AAGGCAGCTTCGGAGTGACAAGG |
HTT |
ENSG00000197386 |
0.6603756865253224 |
[533] |
[189,359] |
4 |
hSpCas9 |
negative selection |
1154205 |
3121365 |
3121388 |
4 |
+ |
26627737 |
RPE1 |
viability after 9 days |
GCAGCTCACCGCTGCTAAGGAGG |
HTT |
ENSG00000197386 |
1.7355024359271995 |
[222] |
[221,245] |
8 |
hSpCas9 |
negative selection |
1154206 |
3099340 |
3099363 |
4 |
+ |
26627737 |
RPE1 |
viability after 12 days |
CGCAGAGTCAGATGTCAGGATGG |
HTT |
ENSG00000197386 |
1.9153755916756015 |
[575] |
[472,700] |
8 |
hSpCas9 |
negative selection |
1236514 |
3105386 |
3105409 |
4 |
- |
26627737 |
RPE1 |
viability after 12 days |
CCAGCTCAGCAAACCTCCACAGG |
HTT |
ENSG00000197386 |
0.5445844319001868 |
[910] |
[237,482] |
3 |
hSpCas9 |
negative selection |
1236515 |
3107291 |
3107314 |
4 |
- |
26627737 |
RPE1 |
viability after 12 days |
GGCACGGCAGAAGGTTCACCAGG |
HTT |
ENSG00000197386 |
2.0409279645249185 |
[68] |
[0,155] |
8 |
hSpCas9 |
negative selection |
1236516 |
3115349 |
3115372 |
4 |
+ |
26627737 |
RPE1 |
viability after 12 days |
ACCATTCGGCGGACAGCGGCTGG |
HTT |
ENSG00000197386 |
1.566803786420178 |
[244] |
[211,176] |
8 |
hSpCas9 |
negative selection |
1236519 |
3116199 |
3116222 |
4 |
+ |
26627737 |
RPE1 |
viability after 12 days |
AAGGCAGCTTCGGAGTGACAAGG |
HTT |
ENSG00000197386 |
1.1206855778677602 |
[533] |
[327,294] |
6 |
hSpCas9 |
negative selection |
1236520 |
3121365 |
3121388 |
4 |
+ |
26627737 |
RPE1 |
viability after 12 days |
GCAGCTCACCGCTGCTAAGGAGG |
HTT |
ENSG00000197386 |
1.5511257900678908 |
[222] |
[160,190] |
8 |
hSpCas9 |
negative selection |
1236521 |
3099340 |
3099363 |
4 |
+ |
26627737 |
RPE1 |
viability after 15 days |
CGCAGAGTCAGATGTCAGGATGG |
HTT |
ENSG00000197386 |
1.9712558971099958 |
[575] |
[672,605] |
8 |
hSpCas9 |
negative selection |
1318829 |
3105386 |
3105409 |
4 |
- |
26627737 |
RPE1 |
viability after 15 days |
CCAGCTCAGCAAACCTCCACAGG |
HTT |
ENSG00000197386 |
0.3702708117816572 |
[910] |
[270,392] |
2 |
hSpCas9 |
negative selection |
1318830 |
3107291 |
3107314 |
4 |
- |
26627737 |
RPE1 |
viability after 15 days |
GGCACGGCAGAAGGTTCACCAGG |
HTT |
ENSG00000197386 |
1.7499326074885762 |
[68] |
[0,127] |
8 |
hSpCas9 |
negative selection |
1318831 |
3115349 |
3115372 |
4 |
+ |
26627737 |
RPE1 |
viability after 15 days |
ACCATTCGGCGGACAGCGGCTGG |
HTT |
ENSG00000197386 |
1.737015397243344 |
[244] |
[313,150] |
8 |
hSpCas9 |
negative selection |
1318834 |
3116199 |
3116222 |
4 |
+ |
26627737 |
RPE1 |
viability after 15 days |
AAGGCAGCTTCGGAGTGACAAGG |
HTT |
ENSG00000197386 |
1.0317129466088675 |
[533] |
[205,407] |
6 |
hSpCas9 |
negative selection |
1318835 |
3121365 |
3121388 |
4 |
+ |
26627737 |
RPE1 |
viability after 15 days |
GCAGCTCACCGCTGCTAAGGAGG |
HTT |
ENSG00000197386 |
1.748523066656115 |
[222] |
[213,209] |
8 |
hSpCas9 |
negative selection |
1318836 |
3099340 |
3099363 |
4 |
+ |
26627737 |
RPE1 |
viability after 18 days |
CGCAGAGTCAGATGTCAGGATGG |
HTT |
ENSG00000197386 |
2.1069949583767213 |
[575] |
[498,851] |
8 |
hSpCas9 |
negative selection |
1401144 |
3105386 |
3105409 |
4 |
- |
26627737 |
RPE1 |
viability after 18 days |
CCAGCTCAGCAAACCTCCACAGG |
HTT |
ENSG00000197386 |
0.4502510371958226 |
[910] |
[128,556] |
3 |
hSpCas9 |
negative selection |
1401145 |
3107291 |
3107314 |
4 |
- |
26627737 |
RPE1 |
viability after 18 days |
GGCACGGCAGAAGGTTCACCAGG |
HTT |
ENSG00000197386 |
2.291490823799366 |
[68] |
[22,163] |
9 |
hSpCas9 |
negative selection |
1401146 |
3115349 |
3115372 |
4 |
+ |
26627737 |
RPE1 |
viability after 18 days |
ACCATTCGGCGGACAGCGGCTGG |
HTT |
ENSG00000197386 |
2.0890859947567804 |
[244] |
[275,286] |
8 |
hSpCas9 |
negative selection |
1401149 |
3116199 |
3116222 |
4 |
+ |
26627737 |
RPE1 |
viability after 18 days |
AAGGCAGCTTCGGAGTGACAAGG |
HTT |
ENSG00000197386 |
1.3842520302275705 |
[533] |
[293,463] |
7 |
hSpCas9 |
negative selection |
1401150 |
3121365 |
3121388 |
4 |
+ |
26627737 |
RPE1 |
viability after 18 days |
GCAGCTCACCGCTGCTAAGGAGG |
HTT |
ENSG00000197386 |
1.803795085414526 |
[222] |
[227,190] |
8 |
hSpCas9 |
negative selection |
1401151 |
3099340 |
3099363 |
4 |
+ |
26627737 |
HeLa |
viability after 8 days |
CGCAGAGTCAGATGTCAGGATGG |
HTT |
ENSG00000197386 |
0.013260877014122485 |
[972] |
[223,568,442] |
0 |
hSpCas9 |
negative selection |
1483459 |
3105386 |
3105409 |
4 |
- |
26627737 |
HeLa |
viability after 8 days |
CCAGCTCAGCAAACCTCCACAGG |
HTT |
ENSG00000197386 |
0.19137864861646625 |
[786] |
[452,331,400] |
1 |
hSpCas9 |
negative selection |
1483460 |
3107291 |
3107314 |
4 |
- |
26627737 |
HeLa |
viability after 8 days |
GGCACGGCAGAAGGTTCACCAGG |
HTT |
ENSG00000197386 |
0.13779900692388414 |
[138] |
[53,92,50] |
1 |
hSpCas9 |
negative selection |
1483461 |
3115349 |
3115372 |
4 |
+ |
26627737 |
HeLa |
viability after 8 days |
ACCATTCGGCGGACAGCGGCTGG |
HTT |
ENSG00000197386 |
0.7802052224742814 |
[159] |
[201,27,144] |
6 |
hSpCas9 |
negative selection |
1483464 |
3116199 |
3116222 |
4 |
+ |
26627737 |
HeLa |
viability after 8 days |
AAGGCAGCTTCGGAGTGACAAGG |
HTT |
ENSG00000197386 |
-0.8698048389225197 |
[320] |
[138,70,35] |
-7 |
hSpCas9 |
negative selection |
1483465 |
3121365 |
3121388 |
4 |
+ |
26627737 |
HeLa |
viability after 8 days |
GCAGCTCACCGCTGCTAAGGAGG |
HTT |
ENSG00000197386 |
1.5180103065928996 |
[66] |
[133,49,77] |
9 |
hSpCas9 |
negative selection |
1483466 |
3099340 |
3099363 |
4 |
+ |
26627737 |
HeLa |
viability after 12 days |
CGCAGAGTCAGATGTCAGGATGG |
HTT |
ENSG00000197386 |
-0.13134435280737944 |
[972] |
[371,333,398] |
-1 |
hSpCas9 |
negative selection |
1565774 |
3105386 |
3105409 |
4 |
- |
26627737 |
HeLa |
viability after 12 days |
CCAGCTCAGCAAACCTCCACAGG |
HTT |
ENSG00000197386 |
-0.4820133004707553 |
[786] |
[247,185,269] |
-4 |
hSpCas9 |
negative selection |
1565775 |
3107291 |
3107314 |
4 |
- |
26627737 |
HeLa |
viability after 12 days |
GGCACGGCAGAAGGTTCACCAGG |
HTT |
ENSG00000197386 |
-5.844082945522194 |
[138] |
[0,0,0] |
-9 |
hSpCas9 |
negative selection |
1565776 |
3115349 |
3115372 |
4 |
+ |
26627737 |
HeLa |
viability after 12 days |
ACCATTCGGCGGACAGCGGCTGG |
HTT |
ENSG00000197386 |
1.0324126470709938 |
[159] |
[44,277,64] |
7 |
hSpCas9 |
negative selection |
1565779 |
3116199 |
3116222 |
4 |
+ |
26627737 |
HeLa |
viability after 12 days |
AAGGCAGCTTCGGAGTGACAAGG |
HTT |
ENSG00000197386 |
-1.1635154435402693 |
[320] |
[81,33,64] |
-8 |
hSpCas9 |
negative selection |
1565780 |
3121365 |
3121388 |
4 |
+ |
26627737 |
HeLa |
viability after 12 days |
GCAGCTCACCGCTGCTAAGGAGG |
HTT |
ENSG00000197386 |
1.9108223092138577 |
[66] |
[72,79,160] |
9 |
hSpCas9 |
negative selection |
1565781 |
3099340 |
3099363 |
4 |
+ |
26627737 |
HeLa |
viability after 15 days |
CGCAGAGTCAGATGTCAGGATGG |
HTT |
ENSG00000197386 |
0.02022696999660245 |
[972] |
[346,466,390] |
0 |
hSpCas9 |
negative selection |
1648089 |
3105386 |
3105409 |
4 |
- |
26627737 |
HeLa |
viability after 15 days |
CCAGCTCAGCAAACCTCCACAGG |
HTT |
ENSG00000197386 |
-0.2364919258155016 |
[786] |
[399,204,203] |
-2 |
hSpCas9 |
negative selection |
1648090 |
3107291 |
3107314 |
4 |
- |
26627737 |
HeLa |
viability after 15 days |
GGCACGGCAGAAGGTTCACCAGG |
HTT |
ENSG00000197386 |
-1.1030847209017205 |
[138] |
[56,14,4] |
-7 |
hSpCas9 |
negative selection |
1648091 |
3115349 |
3115372 |
4 |
+ |
26627737 |
HeLa |
viability after 15 days |
ACCATTCGGCGGACAGCGGCTGG |
HTT |
ENSG00000197386 |
0.6557054550351522 |
[159] |
[55,118,135] |
5 |
hSpCas9 |
negative selection |
1648094 |
3116199 |
3116222 |
4 |
+ |
26627737 |
HeLa |
viability after 15 days |
AAGGCAGCTTCGGAGTGACAAGG |
HTT |
ENSG00000197386 |
-0.9099770807624272 |
[320] |
[110,52,41] |
-7 |
hSpCas9 |
negative selection |
1648095 |
3121365 |
3121388 |
4 |
+ |
26627737 |
HeLa |
viability after 15 days |
GCAGCTCACCGCTGCTAAGGAGG |
HTT |
ENSG00000197386 |
1.8480323819456332 |
[66] |
[80,64,152] |
9 |
hSpCas9 |
negative selection |
1648096 |
3099340 |
3099363 |
4 |
+ |
26627737 |
HeLa |
viability after 18 days |
CGCAGAGTCAGATGTCAGGATGG |
HTT |
ENSG00000197386 |
0.006543361957426663 |
[972] |
[221,390,390] |
0 |
hSpCas9 |
negative selection |
1730404 |
3105386 |
3105409 |
4 |
- |
26627737 |
HeLa |
viability after 18 days |
CCAGCTCAGCAAACCTCCACAGG |
HTT |
ENSG00000197386 |
-0.23100217410920487 |
[786] |
[270,168,203] |
-2 |
hSpCas9 |
negative selection |
1730405 |
3107291 |
3107314 |
4 |
- |
26627737 |
HeLa |
viability after 18 days |
GGCACGGCAGAAGGTTCACCAGG |
HTT |
ENSG00000197386 |
-1.1836039973988246 |
[138] |
[34,12,4] |
-8 |
hSpCas9 |
negative selection |
1730406 |
3115349 |
3115372 |
4 |
+ |
26627737 |
HeLa |
viability after 18 days |
ACCATTCGGCGGACAGCGGCTGG |
HTT |
ENSG00000197386 |
0.7012220328899841 |
[159] |
[41,100,135] |
5 |
hSpCas9 |
negative selection |
1730409 |
3116199 |
3116222 |
4 |
+ |
26627737 |
HeLa |
viability after 18 days |
AAGGCAGCTTCGGAGTGACAAGG |
HTT |
ENSG00000197386 |
-0.9098245819467772 |
[320] |
[71,46,41] |
-7 |
hSpCas9 |
negative selection |
1730410 |
3121365 |
3121388 |
4 |
+ |
26627737 |
HeLa |
viability after 18 days |
GCAGCTCACCGCTGCTAAGGAGG |
HTT |
ENSG00000197386 |
1.7925533665380278 |
[66] |
[46,53,152] |
9 |
hSpCas9 |
negative selection |
1730411 |
3099340 |
3099363 |
4 |
+ |
26627737 |
HCT116 |
viability after 6 days |
CGCAGAGTCAGATGTCAGGATGG |
HTT |
ENSG00000197386 |
0.40631464624783986 |
[1077] |
[513,64] |
2 |
hSpCas9 |
negative selection |
1812719 |
3105386 |
3105409 |
4 |
- |
26627737 |
HCT116 |
viability after 6 days |
CCAGCTCAGCAAACCTCCACAGG |
HTT |
ENSG00000197386 |
1.1740185644691592 |
[1215] |
[246,532] |
6 |
hSpCas9 |
negative selection |
1812720 |
3107291 |
3107314 |
4 |
- |
26627737 |
HCT116 |
viability after 6 days |
GGCACGGCAGAAGGTTCACCAGG |
HTT |
ENSG00000197386 |
2.244886126629231 |
[47] |
[96,1] |
9 |
hSpCas9 |
negative selection |
1812721 |
3115349 |
3115372 |
4 |
+ |
26627737 |
HCT116 |
viability after 6 days |
ACCATTCGGCGGACAGCGGCTGG |
HTT |
ENSG00000197386 |
1.4641569732643762 |
[425] |
[80,241] |
7 |
hSpCas9 |
negative selection |
1812724 |
3116199 |
3116222 |
4 |
+ |
26627737 |
HCT116 |
viability after 6 days |
AAGGCAGCTTCGGAGTGACAAGG |
HTT |
ENSG00000197386 |
-1.0913542505626799 |
[383] |
[37,22] |
-6 |
hSpCas9 |
negative selection |
1812725 |
3121365 |
3121388 |
4 |
+ |
26627737 |
HCT116 |
viability after 6 days |
GCAGCTCACCGCTGCTAAGGAGG |
HTT |
ENSG00000197386 |
-4.544668591404613 |
[253] |
[2,0] |
-9 |
hSpCas9 |
negative selection |
1812726 |
3099340 |
3099363 |
4 |
+ |
26627737 |
HCT116 |
viability after 8 days |
CGCAGAGTCAGATGTCAGGATGG |
HTT |
ENSG00000197386 |
-0.1832102415769652 |
[843] |
[377,337,510] |
-2 |
hSpCas9 |
negative selection |
1895034 |
3105386 |
3105409 |
4 |
- |
26627737 |
HCT116 |
viability after 8 days |
CCAGCTCAGCAAACCTCCACAGG |
HTT |
ENSG00000197386 |
-0.41788615813431285 |
[572] |
[226,175,304] |
-5 |
hSpCas9 |
negative selection |
1895035 |
3107291 |
3107314 |
4 |
- |
26627737 |
HCT116 |
viability after 8 days |
GGCACGGCAGAAGGTTCACCAGG |
HTT |
ENSG00000197386 |
-0.40161218991793346 |
[70] |
[38,18,30] |
-5 |
hSpCas9 |
negative selection |
1895036 |
3115349 |
3115372 |
4 |
+ |
26627737 |
HCT116 |
viability after 8 days |
ACCATTCGGCGGACAGCGGCTGG |
HTT |
ENSG00000197386 |
-0.5134468176840468 |
[295] |
[133,165,43] |
-6 |
hSpCas9 |
negative selection |
1895039 |
3116199 |
3116222 |
4 |
+ |
26627737 |
HCT116 |
viability after 8 days |
AAGGCAGCTTCGGAGTGACAAGG |
HTT |
ENSG00000197386 |
0.4061687234947615 |
[201] |
[114,185,140] |
4 |
hSpCas9 |
negative selection |
1895040 |
3121365 |
3121388 |
4 |
+ |
26627737 |
HCT116 |
viability after 8 days |
GCAGCTCACCGCTGCTAAGGAGG |
HTT |
ENSG00000197386 |
0.09600026070017531 |
[134] |
[94,80,62] |
1 |
hSpCas9 |
negative selection |
1895041 |
3099340 |
3099363 |
4 |
+ |
26627737 |
HCT116 |
viability after 9 days |
CGCAGAGTCAGATGTCAGGATGG |
HTT |
ENSG00000197386 |
0.03356784879579888 |
[1077] |
[364,238] |
0 |
hSpCas9 |
negative selection |
1977349 |
3105386 |
3105409 |
4 |
- |
26627737 |
HCT116 |
viability after 9 days |
CCAGCTCAGCAAACCTCCACAGG |
HTT |
ENSG00000197386 |
0.07137613584121782 |
[1215] |
[310,364] |
0 |
hSpCas9 |
negative selection |
1977350 |
3107291 |
3107314 |
4 |
- |
26627737 |
HCT116 |
viability after 9 days |
GGCACGGCAGAAGGTTCACCAGG |
HTT |
ENSG00000197386 |
3.7376517855207565 |
[47] |
[175,166] |
9 |
hSpCas9 |
negative selection |
1977351 |
3115349 |
3115372 |
4 |
+ |
26627737 |
HCT116 |
viability after 9 days |
ACCATTCGGCGGACAGCGGCTGG |
HTT |
ENSG00000197386 |
0.4187206628133805 |
[425] |
[327,12] |
3 |
hSpCas9 |
negative selection |
1977354 |
3116199 |
3116222 |
4 |
+ |
26627737 |
HCT116 |
viability after 9 days |
AAGGCAGCTTCGGAGTGACAAGG |
HTT |
ENSG00000197386 |
1.9818695909401622 |
[383] |
[70,668] |
9 |
hSpCas9 |
negative selection |
1977355 |
3121365 |
3121388 |
4 |
+ |
26627737 |
HCT116 |
viability after 9 days |
GCAGCTCACCGCTGCTAAGGAGG |
HTT |
ENSG00000197386 |
-2.9712201461602854 |
[253] |
[11,5] |
-9 |
hSpCas9 |
negative selection |
1977356 |
3099340 |
3099363 |
4 |
+ |
26627737 |
HCT116 |
viability after 12 days |
CGCAGAGTCAGATGTCAGGATGG |
HTT |
ENSG00000197386 |
-0.7066028591838636 |
[843] |
[316,296,197] |
-6 |
hSpCas9 |
negative selection |
2059664 |
3105386 |
3105409 |
4 |
- |
26627737 |
HCT116 |
viability after 12 days |
CCAGCTCAGCAAACCTCCACAGG |
HTT |
ENSG00000197386 |
-0.6011008142388128 |
[572] |
[152,216,229] |
-6 |
hSpCas9 |
negative selection |
2059665 |
3107291 |
3107314 |
4 |
- |
26627737 |
HCT116 |
viability after 12 days |
GGCACGGCAGAAGGTTCACCAGG |
HTT |
ENSG00000197386 |
-0.2713281449530669 |
[70] |
[69,17,0] |
-3 |
hSpCas9 |
negative selection |
2059666 |
3115349 |
3115372 |
4 |
+ |
26627737 |
HCT116 |
viability after 12 days |
ACCATTCGGCGGACAGCGGCTGG |
HTT |
ENSG00000197386 |
-0.6905661384529762 |
[295] |
[77,105,106] |
-6 |
hSpCas9 |
negative selection |
2059669 |
3116199 |
3116222 |
4 |
+ |
26627737 |
HCT116 |
viability after 12 days |
AAGGCAGCTTCGGAGTGACAAGG |
HTT |
ENSG00000197386 |
0.23460386019155927 |
[201] |
[72,113,191] |
2 |
hSpCas9 |
negative selection |
2059670 |
3121365 |
3121388 |
4 |
+ |
26627737 |
HCT116 |
viability after 12 days |
GCAGCTCACCGCTGCTAAGGAGG |
HTT |
ENSG00000197386 |
0.2542190638718319 |
[134] |
[52,99,103] |
2 |
hSpCas9 |
negative selection |
2059671 |
3099340 |
3099363 |
4 |
+ |
26627737 |
HCT116 |
viability after 15 days |
CGCAGAGTCAGATGTCAGGATGG |
HTT |
ENSG00000197386 |
-0.924080696902972 |
[843] |
[349,267,160] |
-7 |
hSpCas9 |
negative selection |
2141979 |
3105386 |
3105409 |
4 |
- |
26627737 |
HCT116 |
viability after 15 days |
CCAGCTCAGCAAACCTCCACAGG |
HTT |
ENSG00000197386 |
-0.32987534774072946 |
[572] |
[265,179,338] |
-3 |
hSpCas9 |
negative selection |
2141980 |
3107291 |
3107314 |
4 |
- |
26627737 |
HCT116 |
viability after 15 days |
GGCACGGCAGAAGGTTCACCAGG |
HTT |
ENSG00000197386 |
0.19262688809224016 |
[70] |
[142,0,7] |
2 |
hSpCas9 |
negative selection |
2141981 |
3115349 |
3115372 |
4 |
+ |
26627737 |
HCT116 |
viability after 15 days |
ACCATTCGGCGGACAGCGGCTGG |
HTT |
ENSG00000197386 |
-0.33932786396025083 |
[295] |
[84,170,140] |
-4 |
hSpCas9 |
negative selection |
2141984 |
3116199 |
3116222 |
4 |
+ |
26627737 |
HCT116 |
viability after 15 days |
AAGGCAGCTTCGGAGTGACAAGG |
HTT |
ENSG00000197386 |
0.44625673865942905 |
[201] |
[171,72,229] |
4 |
hSpCas9 |
negative selection |
2141985 |
3121365 |
3121388 |
4 |
+ |
26627737 |
HCT116 |
viability after 15 days |
GCAGCTCACCGCTGCTAAGGAGG |
HTT |
ENSG00000197386 |
0.5003536996521966 |
[134] |
[105,65,155] |
5 |
hSpCas9 |
negative selection |
2141986 |
3099340 |
3099363 |
4 |
+ |
26627737 |
HCT116 |
viability after 18 days |
CGCAGAGTCAGATGTCAGGATGG |
HTT |
ENSG00000197386 |
-0.6499947550704027 |
[843] |
[367,207,204] |
-5 |
hSpCas9 |
negative selection |
2224294 |
3105386 |
3105409 |
4 |
- |
26627737 |
HCT116 |
viability after 18 days |
CCAGCTCAGCAAACCTCCACAGG |
HTT |
ENSG00000197386 |
-0.2358976400878675 |
[572] |
[258,102,357] |
-2 |
hSpCas9 |
negative selection |
2224295 |
3107291 |
3107314 |
4 |
- |
26627737 |
HCT116 |
viability after 18 days |
GGCACGGCAGAAGGTTCACCAGG |
HTT |
ENSG00000197386 |
-0.6880294600366583 |
[70] |
[35,5,22] |
-6 |
hSpCas9 |
negative selection |
2224296 |
3115349 |
3115372 |
4 |
+ |
26627737 |
HCT116 |
viability after 18 days |
ACCATTCGGCGGACAGCGGCTGG |
HTT |
ENSG00000197386 |
-1.0512007970411072 |
[295] |
[81,107,11] |
-7 |
hSpCas9 |
negative selection |
2224299 |
3116199 |
3116222 |
4 |
+ |
26627737 |
HCT116 |
viability after 18 days |
AAGGCAGCTTCGGAGTGACAAGG |
HTT |
ENSG00000197386 |
0.47617224782106354 |
[201] |
[111,115,182] |
4 |
hSpCas9 |
negative selection |
2224300 |
3121365 |
3121388 |
4 |
+ |
26627737 |
HCT116 |
viability after 18 days |
GCAGCTCACCGCTGCTAAGGAGG |
HTT |
ENSG00000197386 |
0.4734607583732159 |
[134] |
[124,40,109] |
4 |
hSpCas9 |
negative selection |
2224301 |
3074816 |
3074839 |
4 |
+ |
24336569 |
HL60 |
viability |
GGAGACCGCCATGGCGACCCTGG |
HTT |
ENSG00000197386 |
0.3080620724092764 |
[541] |
[1419] |
3 |
hSpCas9 |
negative selection |
2271040 |
3074854 |
3074877 |
4 |
- |
24336569 |
HL60 |
viability |
GAAGGACTTGAGGGACTCGAAGG |
HTT |
ENSG00000197386 |
0.0176090965465594 |
[1455] |
[3118] |
0 |
hSpCas9 |
negative selection |
2271041 |
3074863 |
3074886 |
4 |
- |
24336569 |
HL60 |
viability |
CTGCTGCTGGAAGGACTTGAGGG |
HTT |
ENSG00000197386 |
-0.27624751291813043 |
[1060] |
[1853] |
-2 |
hSpCas9 |
negative selection |
2271042 |
3074872 |
3074895 |
4 |
- |
24336569 |
HL60 |
viability |
CTGCTGCTGCTGCTGCTGGAAGG |
HTT |
ENSG00000197386 |
0.306760567515981 |
[352] |
[923] |
3 |
hSpCas9 |
negative selection |
2271043 |
3074961 |
3074984 |
4 |
- |
24336569 |
HL60 |
viability |
TGAGGAAGCTGAGGAGGCGGCGG |
HTT |
ENSG00000197386 |
-1.0400441732489152 |
[411] |
[423] |
-7 |
hSpCas9 |
negative selection |
2271044 |
3074967 |
3074990 |
4 |
- |
24336569 |
HL60 |
viability |
GGCGGCTGAGGAAGCTGAGGAGG |
HTT |
ENSG00000197386 |
-3.163926260820869 |
[719] |
[169] |
-9 |
hSpCas9 |
negative selection |
2271045 |
3074975 |
3074998 |
4 |
+ |
24336569 |
HL60 |
viability |
GCTTCCTCAGCCGCCGCCGCAGG |
HTT |
ENSG00000197386 |
0.6327814170372265 |
[287] |
[944] |
5 |
hSpCas9 |
negative selection |
2271046 |
3074985 |
3075008 |
4 |
- |
24336569 |
HL60 |
viability |
AGCGGCTGTGCCTGCGGCGGCGG |
HTT |
ENSG00000197386 |
0.2540105260964139 |
[423] |
[1069] |
2 |
hSpCas9 |
negative selection |
2271047 |
3074991 |
3075014 |
4 |
- |
24336569 |
HL60 |
viability |
GGCAGCAGCGGCTGTGCCTGCGG |
HTT |
ENSG00000197386 |
0.3436892642632977 |
[603] |
[1621] |
3 |
hSpCas9 |
negative selection |
2271048 |
3075003 |
3075026 |
4 |
- |
24336569 |
HL60 |
viability |
GGCTGCGGCTGAGGCAGCAGCGG |
HTT |
ENSG00000197386 |
-0.48396724616396614 |
[190] |
[288] |
-4 |
hSpCas9 |
negative selection |
2271049 |
3074816 |
3074839 |
4 |
+ |
24336569 |
KBM7 |
viability |
GGAGACCGCCATGGCGACCCTGG |
HTT |
ENSG00000197386 |
1.1093689280026768 |
[207] |
[1223] |
8 |
hSpCas9 |
negative selection |
2338217 |
3074854 |
3074877 |
4 |
- |
24336569 |
KBM7 |
viability |
GAAGGACTTGAGGGACTCGAAGG |
HTT |
ENSG00000197386 |
-0.20153550714778912 |
[1209] |
[2869] |
-2 |
hSpCas9 |
negative selection |
2338218 |
3074863 |
3074886 |
4 |
- |
24336569 |
KBM7 |
viability |
CTGCTGCTGGAAGGACTTGAGGG |
HTT |
ENSG00000197386 |
1.4008854341278134 |
[256] |
[1850] |
9 |
hSpCas9 |
negative selection |
2338219 |
3074872 |
3074895 |
4 |
- |
24336569 |
KBM7 |
viability |
CTGCTGCTGCTGCTGCTGGAAGG |
HTT |
ENSG00000197386 |
-1.4435549399900878 |
[357] |
[358] |
-7 |
hSpCas9 |
negative selection |
2338220 |
3074961 |
3074984 |
4 |
- |
24336569 |
KBM7 |
viability |
TGAGGAAGCTGAGGAGGCGGCGG |
HTT |
ENSG00000197386 |
-1.273374467729334 |
[373] |
[421] |
-7 |
hSpCas9 |
negative selection |
2338221 |
3074967 |
3074990 |
4 |
- |
24336569 |
KBM7 |
viability |
GGCGGCTGAGGAAGCTGAGGAGG |
HTT |
ENSG00000197386 |
-2.805727479348998 |
[604] |
[235] |
-9 |
hSpCas9 |
negative selection |
2338222 |
3074975 |
3074998 |
4 |
+ |
24336569 |
KBM7 |
viability |
GCTTCCTCAGCCGCCGCCGCAGG |
HTT |
ENSG00000197386 |
-0.8284358488307629 |
[430] |
[661] |
-6 |
hSpCas9 |
negative selection |
2338223 |
3074985 |
3075008 |
4 |
- |
24336569 |
KBM7 |
viability |
AGCGGCTGTGCCTGCGGCGGCGG |
HTT |
ENSG00000197386 |
1.2528605215922095 |
[309] |
[2014] |
8 |
hSpCas9 |
negative selection |
2338224 |
3074991 |
3075014 |
4 |
- |
24336569 |
KBM7 |
viability |
GGCAGCAGCGGCTGTGCCTGCGG |
HTT |
ENSG00000197386 |
0.3840111124539193 |
[564] |
[2010] |
3 |
hSpCas9 |
negative selection |
2338225 |
3075003 |
3075026 |
4 |
- |
24336569 |
KBM7 |
viability |
GGCTGCGGCTGAGGCAGCAGCGG |
HTT |
ENSG00000197386 |
-0.5565135681020467 |
[274] |
[509] |
-4 |
hSpCas9 |
negative selection |
2338226 |
3093940 |
3093963 |
4 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
GATCATTCTTGGGTGTTTCTTGG |
HTT |
ENSG00000197386 |
-1.4604244820040901 |
[342,170] |
[18,21] |
-8 |
dCas9-VP64 |
positive selection |
2385508 |
3103396 |
3103419 |
4 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
TGTATTTTTTAGTAGAGACGGAG |
HTT |
ENSG00000197386 |
1.1426357441402555 |
[202,199] |
[99,94] |
4 |
dCas9-VP64 |
positive selection |
2404482 |
3211179 |
3211202 |
4 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
TAGGCCTGAGCCACCACGCCCGG |
HTT |
ENSG00000197386 |
3.4338349531393177 |
[26,8] |
[73,8] |
9 |
dCas9-VP64 |
positive selection |
2452774 |
3080118 |
3080141 |
4 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
GAGTTTCGCTCTTGTCACCCGGG |
HTT |
ENSG00000197386 |
0.7275722083534555 |
[14,18] |
[4,6] |
3 |
dCas9-VP64 |
positive selection |
2454158 |
3201434 |
3201457 |
4 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
GCGGGAGAATCGCTTGAACCTAG |
HTT |
ENSG00000197386 |
-0.7872021050505377 |
[82,16] |
[7,2] |
-4 |
dCas9-VP64 |
positive selection |
2464219 |
3085251 |
3085274 |
4 |
- |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
CCCAGCTACTCGGGAGGCTGCGG |
HTT |
ENSG00000197386 |
-0.4892893999709095 |
[44,388] |
[14,54] |
-2 |
dCas9-VP64 |
positive selection |
2465856 |
3113575 |
3113598 |
4 |
- |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
AGCACTTTGGGAGGCTGAAGAAG |
HTT |
ENSG00000197386 |
6.35516198632701 |
[126,1064] |
[8429,13566] |
9 |
dCas9-VP64 |
positive selection |
2467018 |
3155650 |
3155673 |
4 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
GGTGGGCGGATCACGAGGTCGGG |
HTT |
ENSG00000197386 |
2.37985785728498 |
[230,76] |
[300,38] |
7 |
dCas9-VP64 |
positive selection |
2475718 |
3093940 |
3093963 |
4 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
GATCATTCTTGGGTGTTTCTTGG |
HTT |
ENSG00000197386 |
0.05140108842447888 |
[543,205] |
[120,133] |
0 |
dCas9-VP64 |
positive selection |
2480763 |
3103396 |
3103419 |
4 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
TGTATTTTTTAGTAGAGACGGAG |
HTT |
ENSG00000197386 |
0.25343284215860473 |
[158,136] |
[77,37] |
2 |
dCas9-VP64 |
positive selection |
2499737 |
3211179 |
3211202 |
4 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
TAGGCCTGAGCCACCACGCCCGG |
HTT |
ENSG00000197386 |
0.4025668265088169 |
[39,71] |
[26,20] |
3 |
dCas9-VP64 |
positive selection |
2548029 |
3080118 |
3080141 |
4 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
GAGTTTCGCTCTTGTCACCCGGG |
HTT |
ENSG00000197386 |
0.3552301064276102 |
[39,27] |
[14,12] |
3 |
dCas9-VP64 |
positive selection |
2549413 |
3201434 |
3201457 |
4 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
GCGGGAGAATCGCTTGAACCTAG |
HTT |
ENSG00000197386 |
-0.42856361530074616 |
[34,35] |
[8,6] |
-4 |
dCas9-VP64 |
positive selection |
2559474 |
3085251 |
3085274 |
4 |
- |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
CCCAGCTACTCGGGAGGCTGCGG |
HTT |
ENSG00000197386 |
-0.16148281958930955 |
[134,276] |
[52,65] |
-1 |
dCas9-VP64 |
positive selection |
2561111 |
3113575 |
3113598 |
4 |
- |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
AGCACTTTGGGAGGCTGAAGAAG |
HTT |
ENSG00000197386 |
6.970706058095935 |
[220,255] |
[14367,5508] |
9 |
dCas9-VP64 |
positive selection |
2562273 |
3155650 |
3155673 |
4 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
GGTGGGCGGATCACGAGGTCGGG |
HTT |
ENSG00000197386 |
0.17249846111827716 |
[159,84] |
[44,44] |
1 |
dCas9-VP64 |
positive selection |
2570973 |
3127264 |
3127287 |
4 |
- |
27453484 |
HT29 |
resistance to T3SS1-dependent cytotoxicity |
ACTGATCTCATCCTTCACTGAGG |
HTT |
ENSG00000197386 |
0.19271246964769262 |
[4,4] |
[6,2] |
4 |
hSpCas9 |
positive selection |
2994547 |
3105385 |
3105408 |
4 |
- |
27453484 |
HT29 |
resistance to T3SS1-dependent cytotoxicity |
CAGCTCAGCAAACCTCCACAGGG |
HTT |
ENSG00000197386 |
-0.5693301965139925 |
[4,3] |
[0,3] |
-7 |
hSpCas9 |
positive selection |
2994548 |
3127544 |
3127567 |
4 |
+ |
27453484 |
HT29 |
resistance to T3SS1-dependent cytotoxicity |
GCTCCCAGACCACCACCGAAGGG |
HTT |
ENSG00000197386 |
0.19254995915426937 |
[3,4] |
[3,3] |
4 |
hSpCas9 |
positive selection |
2994549 |
3136274 |
3136297 |
4 |
+ |
27453484 |
HT29 |
resistance to T3SS1-dependent cytotoxicity |
GCTTGGAGATGAAGACCCCAGGG |
HTT |
ENSG00000197386 |
-0.2039278028469945 |
[4,4] |
[2,3] |
-3 |
hSpCas9 |
positive selection |
2994550 |
3127264 |
3127287 |
4 |
- |
27453484 |
HT29 |
resistance to T3SS2-dependent cytotoxicity |
ACTGATCTCATCCTTCACTGAGG |
HTT |
ENSG00000197386 |
0.10599504339549659 |
[4,4] |
[3,2] |
1 |
hSpCas9 |
positive selection |
3062405 |
3105385 |
3105408 |
4 |
- |
27453484 |
HT29 |
resistance to T3SS2-dependent cytotoxicity |
CAGCTCAGCAAACCTCCACAGGG |
HTT |
ENSG00000197386 |
-0.689108181148236 |
[4,4] |
[0,2] |
-8 |
hSpCas9 |
positive selection |
3062406 |
3127544 |
3127567 |
4 |
+ |
27453484 |
HT29 |
resistance to T3SS2-dependent cytotoxicity |
GCTCCCAGACCACCACCGAAGGG |
HTT |
ENSG00000197386 |
-0.4956359695024719 |
[3,3] |
[2,0] |
-7 |
hSpCas9 |
positive selection |
3062407 |
3136274 |
3136297 |
4 |
+ |
27453484 |
HT29 |
resistance to T3SS2-dependent cytotoxicity |
GCTTGGAGATGAAGACCCCAGGG |
HTT |
ENSG00000197386 |
-0.029117343045623523 |
[4,4] |
[3,2] |
0 |
hSpCas9 |
positive selection |
3062408 |
3075075 |
3075098 |
|
- |
24336571 |
A375 |
resistance to PLX after 7 days |
CAAACTCACGGTCGGTGCAGCGG |
HTT |
ENSG00000197386 |
-0.23627483005514427 |
[4,6] |
[4,4] |
-7 |
hSpCas9 |
positive selection |
3120134 |
3086987 |
3087010 |
|
+ |
24336571 |
A375 |
resistance to PLX after 7 days |
GACAATATGTGAAAACATAGTGG |
HTT |
ENSG00000197386 |
0.5558993733379707 |
[3,3] |
[5,4] |
9 |
hSpCas9 |
positive selection |
3120135 |
3086969 |
3086992 |
|
- |
24336571 |
A375 |
resistance to PLX after 7 days |
TTGTCAGACAATGATTCACACGG |
HTT |
ENSG00000197386 |
-0.005415966835036794 |
[10,14] |
[12,11] |
0 |
hSpCas9 |
positive selection |
3120136 |
3075075 |
3075098 |
|
- |
24336571 |
A375 |
resistance to PLX after 14 days |
CAAACTCACGGTCGGTGCAGCGG |
HTT |
ENSG00000197386 |
-0.44379841243069895 |
[5,8] |
[1,1] |
-5 |
hSpCas9 |
positive selection |
3177927 |
3086987 |
3087010 |
|
+ |
24336571 |
A375 |
resistance to PLX after 14 days |
GACAATATGTGAAAACATAGTGG |
HTT |
ENSG00000197386 |
1.0034347892787139 |
[1,3] |
[2,2] |
7 |
hSpCas9 |
positive selection |
3177928 |
3086969 |
3086992 |
|
- |
24336571 |
A375 |
resistance to PLX after 14 days |
TTGTCAGACAATGATTCACACGG |
HTT |
ENSG00000197386 |
-0.18631241666225534 |
[12,11] |
[4,3] |
-2 |
hSpCas9 |
positive selection |
3177929 |
3075075 |
3075098 |
|
- |
24336571 |
A375 |
viability after 7 days |
CAAACTCACGGTCGGTGCAGCGG |
HTT |
ENSG00000197386 |
-0.3966888990445884 |
[7] |
[4,6] |
-5 |
hSpCas9 |
negative selection |
3235720 |
3086987 |
3087010 |
|
+ |
24336571 |
A375 |
viability after 7 days |
GACAATATGTGAAAACATAGTGG |
HTT |
ENSG00000197386 |
-1.165138672269431 |
[9] |
[3,3] |
-9 |
hSpCas9 |
negative selection |
3235721 |
3086969 |
3086992 |
|
- |
24336571 |
A375 |
viability after 7 days |
TTGTCAGACAATGATTCACACGG |
HTT |
ENSG00000197386 |
-0.2122798306742987 |
[15] |
[10,14] |
-3 |
hSpCas9 |
negative selection |
3235722 |
3075075 |
3075098 |
|
- |
24336571 |
A375 |
viability after 14 days |
CAAACTCACGGTCGGTGCAGCGG |
HTT |
ENSG00000197386 |
-0.06257110683337896 |
[7] |
[5,8] |
0 |
hSpCas9 |
negative selection |
3293513 |
3086987 |
3087010 |
|
+ |
24336571 |
A375 |
viability after 14 days |
GACAATATGTGAAAACATAGTGG |
HTT |
ENSG00000197386 |
-1.4721124597399469 |
[9] |
[1,3] |
-9 |
hSpCas9 |
negative selection |
3293514 |
3086969 |
3086992 |
|
- |
24336571 |
A375 |
viability after 14 days |
TTGTCAGACAATGATTCACACGG |
HTT |
ENSG00000197386 |
-0.21091102905929893 |
[15] |
[12,11] |
-2 |
hSpCas9 |
negative selection |
3293515 |
3086969 |
3086992 |
4 |
- |
27383988 |
293T |
resistance to West Nile virus (flavivirus) |
TTGTCAGACAATGATTCACACGG |
HTT |
ENSG00000197386 |
-0.49756129071763344 |
[215,215] |
[0,0] |
-3 |
hSpCas9 |
positive selection |
3373561 |
3086987 |
3087010 |
4 |
+ |
27383988 |
293T |
resistance to West Nile virus (flavivirus) |
GACAATATGTGAAAACATAGTGG |
HTT |
ENSG00000197386 |
2.7978945928085377 |
[21,21] |
[0,0] |
8 |
hSpCas9 |
positive selection |
3373562 |
3099281 |
3099304 |
4 |
- |
27383988 |
293T |
resistance to West Nile virus (flavivirus) |
CCCAGAAGTTTCTGAAATTCTGG |
HTT |
ENSG00000197386 |
0.6723637107246789 |
[95,95] |
[0,0] |
3 |
hSpCas9 |
positive selection |
3373563 |
3127264 |
3127287 |
4 |
- |
26780180 |
HT29 |
viability (Avana library 4 designs) |
ACTGATCTCATCCTTCACTGAGG |
HTT |
ENSG00000197386 |
1.0421558403476 |
[] |
[] |
4 |
hSpCas9 |
negative selection |
3431881 |
3105385 |
3105408 |
4 |
- |
26780180 |
HT29 |
viability (Avana library 4 designs) |
CAGCTCAGCAAACCTCCACAGGG |
HTT |
ENSG00000197386 |
3.89834284063145 |
[] |
[] |
9 |
hSpCas9 |
negative selection |
3431882 |
3127543 |
3127566 |
4 |
+ |
26780180 |
HT29 |
viability (Avana library 4 designs) |
GCTCCCAGACCACCACCGAAGGG |
HTT |
ENSG00000197386 |
1.0156367981324 |
[] |
[] |
4 |
hSpCas9 |
negative selection |
3431883 |
3136273 |
3136296 |
4 |
+ |
26780180 |
HT29 |
viability (Avana library 4 designs) |
GCTTGGAGATGAAGACCCCAGGG |
HTT |
ENSG00000197386 |
3.3247207826662 |
[] |
[] |
8 |
hSpCas9 |
negative selection |
3431884 |
3127543 |
3127566 |
4 |
+ |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
GCTCCCAGACCACCACCGAAGGG |
HTT |
ENSG00000197386 |
2.23274865882838 |
[] |
[] |
3 |
hSpCas9 |
negative selection |
3517762 |
3136273 |
3136296 |
4 |
+ |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
GCTTGGAGATGAAGACCCCAGGG |
HTT |
ENSG00000197386 |
-0.454853691490744 |
[] |
[] |
0 |
hSpCas9 |
negative selection |
3517763 |
3105385 |
3105408 |
4 |
- |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
CAGCTCAGCAAACCTCCACAGGG |
HTT |
ENSG00000197386 |
-1.61315810504208 |
[] |
[] |
-2 |
hSpCas9 |
negative selection |
3517764 |
3127264 |
3127287 |
4 |
- |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
ACTGATCTCATCCTTCACTGAGG |
HTT |
ENSG00000197386 |
-4.55493029330923 |
[] |
[] |
-5 |
hSpCas9 |
negative selection |
3517765 |
3121373 |
3121396 |
4 |
- |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
ACCAGACTCCTCCTTAGCAGCGG |
HTT |
ENSG00000197386 |
-4.20729014068432 |
[] |
[] |
-5 |
hSpCas9 |
negative selection |
3517766 |
3173125 |
3173148 |
4 |
- |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
TTGCCACAACTGTTACCCCGAGG |
HTT |
ENSG00000197386 |
2.24630791244816 |
[] |
[] |
3 |
hSpCas9 |
negative selection |
3517767 |
3127543 |
3127566 |
4 |
+ |
26780180 |
A375 |
viability (Avana lentiGuide) |
GCTCCCAGACCACCACCGAAGGG |
HTT |
ENSG00000197386 |
-1.69477825149 |
[] |
[] |
-3 |
hSpCas9 |
negative selection |
3626421 |
3136273 |
3136296 |
4 |
+ |
26780180 |
A375 |
viability (Avana lentiGuide) |
GCTTGGAGATGAAGACCCCAGGG |
HTT |
ENSG00000197386 |
2.78193376041236 |
[] |
[] |
3 |
hSpCas9 |
negative selection |
3626422 |
3105385 |
3105408 |
4 |
- |
26780180 |
A375 |
viability (Avana lentiGuide) |
CAGCTCAGCAAACCTCCACAGGG |
HTT |
ENSG00000197386 |
-2.18515984682571 |
[] |
[] |
-4 |
hSpCas9 |
negative selection |
3626423 |
3127264 |
3127287 |
4 |
- |
26780180 |
A375 |
viability (Avana lentiGuide) |
ACTGATCTCATCCTTCACTGAGG |
HTT |
ENSG00000197386 |
0.526862855567406 |
[] |
[] |
0 |
hSpCas9 |
negative selection |
3626424 |
3121373 |
3121396 |
4 |
- |
26780180 |
A375 |
viability (Avana lentiGuide) |
ACCAGACTCCTCCTTAGCAGCGG |
HTT |
ENSG00000197386 |
3.85715911246264 |
[] |
[] |
4 |
hSpCas9 |
negative selection |
3626425 |
3173125 |
3173148 |
4 |
- |
26780180 |
A375 |
viability (Avana lentiGuide) |
TTGCCACAACTGTTACCCCGAGG |
HTT |
ENSG00000197386 |
3.49994268724758 |
[] |
[] |
3 |
hSpCas9 |
negative selection |
3626426 |
3127543 |
3127566 |
4 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
GCTCCCAGACCACCACCGAAGGG |
HTT |
ENSG00000197386 |
0.008396401395829645 |
[4] |
[4,3] |
0 |
hSpCas9 |
positive selection |
3735080 |
3136273 |
3136296 |
4 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
GCTTGGAGATGAAGACCCCAGGG |
HTT |
ENSG00000197386 |
0.1069534623074827 |
[5] |
[5,5] |
2 |
hSpCas9 |
positive selection |
3735081 |
3105385 |
3105408 |
4 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
CAGCTCAGCAAACCTCCACAGGG |
HTT |
ENSG00000197386 |
-0.14519605933852342 |
[4] |
[4,3] |
-2 |
hSpCas9 |
positive selection |
3735082 |
3127264 |
3127287 |
4 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
ACTGATCTCATCCTTCACTGAGG |
HTT |
ENSG00000197386 |
-0.28055259403553473 |
[6] |
[4,4] |
-4 |
hSpCas9 |
positive selection |
3735083 |
3121373 |
3121396 |
4 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
ACCAGACTCCTCCTTAGCAGCGG |
HTT |
ENSG00000197386 |
-0.014443011456879923 |
[5] |
[5,4] |
0 |
hSpCas9 |
positive selection |
3735084 |
3173125 |
3173148 |
4 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
TTGCCACAACTGTTACCCCGAGG |
HTT |
ENSG00000197386 |
0.23760932931396306 |
[4] |
[5,5] |
6 |
hSpCas9 |
positive selection |
3735085 |
3127543 |
3127566 |
4 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
GCTCCCAGACCACCACCGAAGGG |
HTT |
ENSG00000197386 |
0.14673202392057477 |
[5] |
[4,5] |
3 |
hSpCas9 |
positive selection |
3843687 |
3136273 |
3136296 |
4 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
GCTTGGAGATGAAGACCCCAGGG |
HTT |
ENSG00000197386 |
-0.00015021590028990728 |
[6] |
[4,5] |
0 |
hSpCas9 |
positive selection |
3843688 |
3105385 |
3105408 |
4 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
CAGCTCAGCAAACCTCCACAGGG |
HTT |
ENSG00000197386 |
0.34456083764457296 |
[5] |
[5,6] |
8 |
hSpCas9 |
positive selection |
3843689 |
3127264 |
3127287 |
4 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
ACTGATCTCATCCTTCACTGAGG |
HTT |
ENSG00000197386 |
0.2588840048732841 |
[6] |
[6,7] |
7 |
hSpCas9 |
positive selection |
3843690 |
3121373 |
3121396 |
4 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
ACCAGACTCCTCCTTAGCAGCGG |
HTT |
ENSG00000197386 |
-0.14099718990658325 |
[5] |
[3,4] |
-2 |
hSpCas9 |
positive selection |
3843691 |
3173125 |
3173148 |
4 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
TTGCCACAACTGTTACCCCGAGG |
HTT |
ENSG00000197386 |
0.09221480624884158 |
[5] |
[4,5] |
2 |
hSpCas9 |
positive selection |
3843692 |
3099336 |
3099359 |
4 |
+ |
26780180 |
A375 |
viability |
ATGACGCAGAGTCAGATGTCAGG |
HTT |
ENSG00000197386 |
1.39602080424759 |
[] |
[] |
7 |
hSpCas9 |
negative selection |
3949660 |
3075075 |
3075098 |
4 |
- |
26780180 |
A375 |
viability |
CAAACTCACGGTCGGTGCAGCGG |
HTT |
ENSG00000197386 |
1.50457203320051 |
[] |
[] |
8 |
hSpCas9 |
negative selection |
3949661 |
3099281 |
3099304 |
4 |
- |
26780180 |
A375 |
viability |
CCCAGAAGTTTCTGAAATTCTGG |
HTT |
ENSG00000197386 |
0.994427067354233 |
[] |
[] |
4 |
hSpCas9 |
negative selection |
3949662 |
3086987 |
3087010 |
4 |
+ |
26780180 |
A375 |
viability |
GACAATATGTGAAAACATAGTGG |
HTT |
ENSG00000197386 |
1.04254196305773 |
[] |
[] |
5 |
hSpCas9 |
negative selection |
3949663 |
3074816 |
3074839 |
4 |
+ |
26780180 |
A375 |
viability |
GGAGACCGCCATGGCGACCCTGG |
HTT |
ENSG00000197386 |
0.823662186764297 |
[] |
[] |
3 |
hSpCas9 |
negative selection |
3949664 |
3086969 |
3086992 |
4 |
- |
26780180 |
A375 |
viability |
TTGTCAGACAATGATTCACACGG |
HTT |
ENSG00000197386 |
1.18987640634229 |
[] |
[] |
6 |
hSpCas9 |
negative selection |
3949665 |
3099336 |
3099359 |
4 |
+ |
26780180 |
HT29 |
viability (GeCKOv2 library) |
ATGACGCAGAGTCAGATGTCAGG |
HTT |
ENSG00000197386 |
1.94438986140317 |
[] |
[] |
9 |
hSpCas9 |
negative selection |
4057626 |
3075075 |
3075098 |
4 |
- |
26780180 |
HT29 |
viability (GeCKOv2 library) |
CAAACTCACGGTCGGTGCAGCGG |
HTT |
ENSG00000197386 |
0.94111161507398 |
[] |
[] |
4 |
hSpCas9 |
negative selection |
4057627 |
3099281 |
3099304 |
4 |
- |
26780180 |
HT29 |
viability (GeCKOv2 library) |
CCCAGAAGTTTCTGAAATTCTGG |
HTT |
ENSG00000197386 |
1.01238559539954 |
[] |
[] |
4 |
hSpCas9 |
negative selection |
4057628 |
3086987 |
3087010 |
4 |
+ |
26780180 |
HT29 |
viability (GeCKOv2 library) |
GACAATATGTGAAAACATAGTGG |
HTT |
ENSG00000197386 |
1.14696835558653 |
[] |
[] |
5 |
hSpCas9 |
negative selection |
4057629 |
3074816 |
3074839 |
4 |
+ |
26780180 |
HT29 |
viability (GeCKOv2 library) |
GGAGACCGCCATGGCGACCCTGG |
HTT |
ENSG00000197386 |
1.29759491593392 |
[] |
[] |
6 |
hSpCas9 |
negative selection |
4057630 |
3086969 |
3086992 |
4 |
- |
26780180 |
HT29 |
viability (GeCKOv2 library) |
TTGTCAGACAATGATTCACACGG |
HTT |
ENSG00000197386 |
0.333521815046349 |
[] |
[] |
0 |
hSpCas9 |
negative selection |
4057631 |
3075075 |
3075098 |
4 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiCRISPRv1) |
CAAACTCACGGTCGGTGCAGCGG |
HTT |
ENSG00000197386 |
-0.11697448203297084 |
[2] |
[2,0] |
-3 |
hSpCas9 |
positive selection |
4143719 |
3086987 |
3087010 |
4 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiCRISPRv1) |
GACAATATGTGAAAACATAGTGG |
HTT |
ENSG00000197386 |
0.1350729032137813 |
[1] |
[0,1] |
3 |
hSpCas9 |
positive selection |
4143720 |
3086969 |
3086992 |
4 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiCRISPRv1) |
TTGTCAGACAATGATTCACACGG |
HTT |
ENSG00000197386 |
0.5091712896456334 |
[3] |
[5,2] |
9 |
hSpCas9 |
positive selection |
4143721 |
3075075 |
3075098 |
4 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiGuide) |
CAAACTCACGGTCGGTGCAGCGG |
HTT |
ENSG00000197386 |
0.6349479200193217 |
[1] |
[0,0,4,0] |
4 |
hSpCas9 |
positive selection |
4207741 |
3086987 |
3087010 |
4 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiGuide) |
GACAATATGTGAAAACATAGTGG |
HTT |
ENSG00000197386 |
0.432238708751498 |
[3] |
[0,3,3,0] |
3 |
hSpCas9 |
positive selection |
4207742 |
3086969 |
3086992 |
4 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiGuide) |
TTGTCAGACAATGATTCACACGG |
HTT |
ENSG00000197386 |
-0.838573509248223 |
[3] |
[0,0,0,0] |
-9 |
hSpCas9 |
positive selection |
4207743 |
3075075 |
3075098 |
4 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
CAAACTCACGGTCGGTGCAGCGG |
HTT |
ENSG00000197386 |
0.09243851507900289 |
[3] |
[2,2] |
1 |
hSpCas9 |
positive selection |
4276098 |
3099336 |
3099359 |
4 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
ATGACGCAGAGTCAGATGTCAGG |
HTT |
ENSG00000197386 |
-0.0034277420628074096 |
[3] |
[2,2] |
0 |
hSpCas9 |
positive selection |
4276099 |
3074816 |
3074839 |
4 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
GGAGACCGCCATGGCGACCCTGG |
HTT |
ENSG00000197386 |
-0.18181501782042875 |
[1] |
[1,0] |
-4 |
hSpCas9 |
positive selection |
4276100 |
3086969 |
3086992 |
4 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
TTGTCAGACAATGATTCACACGG |
HTT |
ENSG00000197386 |
0.6217299540776194 |
[3] |
[3,5] |
9 |
hSpCas9 |
positive selection |
4340356 |
3086987 |
3087010 |
4 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
GACAATATGTGAAAACATAGTGG |
HTT |
ENSG00000197386 |
-0.3259948149905628 |
[1] |
[1,0] |
-6 |
hSpCas9 |
positive selection |
4340357 |
3099281 |
3099304 |
4 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
CCCAGAAGTTTCTGAAATTCTGG |
HTT |
ENSG00000197386 |
0.22146495682658265 |
[2] |
[2,1] |
4 |
hSpCas9 |
positive selection |
4340358 |
3136289 |
3136311 |
4 |
- |
27760321 |
OCIAML3 |
viability |
CGGCAACATGTCGCACCCTGGG |
HTT |
ENSG00000197386 |
0.872340716133372 |
[800,733] |
[1035,1179] |
8 |
hSpCas9 |
negative selection |
4408467 |
3154328 |
3154350 |
4 |
+ |
27760321 |
OCIAML3 |
viability |
AAGTCCCATCCGACGAAAGGGG |
HTT |
ENSG00000197386 |
-0.8129019159200117 |
[373,323] |
[134,180] |
-6 |
hSpCas9 |
negative selection |
4408468 |
3172351 |
3172373 |
4 |
- |
27760321 |
OCIAML3 |
viability |
ATTGGTTCTCGACTAAAGCAGG |
HTT |
ENSG00000197386 |
0.25197109529345585 |
[227,190] |
[189,199] |
3 |
hSpCas9 |
negative selection |
4408469 |
3105365 |
3105387 |
4 |
- |
27760321 |
OCIAML3 |
viability |
GGCAGCACGCAAACTCCGAGGG |
HTT |
ENSG00000197386 |
-0.5873221293600456 |
[598,417] |
[206,332] |
-5 |
hSpCas9 |
negative selection |
4408470 |
3115347 |
3115369 |
4 |
- |
27760321 |
OCIAML3 |
viability |
GCCGCTGTCCGCCGAATGGTGG |
HTT |
ENSG00000197386 |
0.0986355722769311 |
[801,623] |
[519,687] |
1 |
hSpCas9 |
negative selection |
4408471 |
3136289 |
3136311 |
4 |
- |
27760321 |
OCIAML2 |
viability |
CGGCAACATGTCGCACCCTGGG |
HTT |
ENSG00000197386 |
0.8064980270613868 |
[800,733] |
[981,1221] |
9 |
hSpCas9 |
negative selection |
4491930 |
3154328 |
3154350 |
4 |
+ |
27760321 |
OCIAML2 |
viability |
AAGTCCCATCCGACGAAAGGGG |
HTT |
ENSG00000197386 |
-0.5785971670417331 |
[373,323] |
[210,158] |
-6 |
hSpCas9 |
negative selection |
4491931 |
3172351 |
3172373 |
4 |
- |
27760321 |
OCIAML2 |
viability |
ATTGGTTCTCGACTAAAGCAGG |
HTT |
ENSG00000197386 |
0.08856944245913101 |
[227,190] |
[169,191] |
1 |
hSpCas9 |
negative selection |
4491932 |
3105365 |
3105387 |
4 |
- |
27760321 |
OCIAML2 |
viability |
GGCAGCACGCAAACTCCGAGGG |
HTT |
ENSG00000197386 |
0.33626932132868587 |
[598,417] |
[509,517] |
4 |
hSpCas9 |
negative selection |
4491933 |
3115347 |
3115369 |
4 |
- |
27760321 |
OCIAML2 |
viability |
GCCGCTGTCCGCCGAATGGTGG |
HTT |
ENSG00000197386 |
-0.9220519831622158 |
[801,623] |
[218,411] |
-7 |
hSpCas9 |
negative selection |
4491934 |
3136289 |
3136311 |
4 |
- |
27760321 |
MV411 |
viability |
CGGCAACATGTCGCACCCTGGG |
HTT |
ENSG00000197386 |
1.0878561381906726 |
[800,733] |
[869,1385] |
7 |
hSpCas9 |
negative selection |
4575393 |
3154328 |
3154350 |
4 |
+ |
27760321 |
MV411 |
viability |
AAGTCCCATCCGACGAAAGGGG |
HTT |
ENSG00000197386 |
-0.34324019019785984 |
[373,323] |
[25,413] |
-2 |
hSpCas9 |
negative selection |
4575394 |
3172351 |
3172373 |
4 |
- |
27760321 |
MV411 |
viability |
ATTGGTTCTCGACTAAAGCAGG |
HTT |
ENSG00000197386 |
0.19289205891574468 |
[227,190] |
[156,157] |
1 |
hSpCas9 |
negative selection |
4575395 |
3105365 |
3105387 |
4 |
- |
27760321 |
MV411 |
viability |
GGCAGCACGCAAACTCCGAGGG |
HTT |
ENSG00000197386 |
0.21152377289914542 |
[598,417] |
[320,478] |
1 |
hSpCas9 |
negative selection |
4575396 |
3115347 |
3115369 |
4 |
- |
27760321 |
MV411 |
viability |
GCCGCTGTCCGCCGAATGGTGG |
HTT |
ENSG00000197386 |
-0.3433136015160302 |
[801,623] |
[231,572] |
-2 |
hSpCas9 |
negative selection |
4575397 |
3136289 |
3136311 |
4 |
- |
27760321 |
HL60 |
viability |
CGGCAACATGTCGCACCCTGGG |
HTT |
ENSG00000197386 |
0.40099642150324444 |
[800,733] |
[780,876] |
5 |
hSpCas9 |
negative selection |
4658856 |
3154328 |
3154350 |
4 |
+ |
27760321 |
HL60 |
viability |
AAGTCCCATCCGACGAAAGGGG |
HTT |
ENSG00000197386 |
-0.3575981710071286 |
[373,323] |
[119,329] |
-4 |
hSpCas9 |
negative selection |
4658857 |
3172351 |
3172373 |
4 |
- |
27760321 |
HL60 |
viability |
ATTGGTTCTCGACTAAAGCAGG |
HTT |
ENSG00000197386 |
-0.5213433071126232 |
[227,190] |
[143,91] |
-5 |
hSpCas9 |
negative selection |
4658858 |
3105365 |
3105387 |
4 |
- |
27760321 |
HL60 |
viability |
GGCAGCACGCAAACTCCGAGGG |
HTT |
ENSG00000197386 |
-1.0108886036646159 |
[598,417] |
[196,210] |
-7 |
hSpCas9 |
negative selection |
4658859 |
3115347 |
3115369 |
4 |
- |
27760321 |
HL60 |
viability |
GCCGCTGTCCGCCGAATGGTGG |
HTT |
ENSG00000197386 |
-0.3046156054612112 |
[801,623] |
[394,545] |
-3 |
hSpCas9 |
negative selection |
4658860 |
3136289 |
3136311 |
4 |
- |
27760321 |
HT1080 |
viability |
CGGCAACATGTCGCACCCTGGG |
HTT |
ENSG00000197386 |
-1.6248864836929817 |
[733,572] |
[71,97] |
-5 |
hSpCas9 |
negative selection |
4742319 |
3154328 |
3154350 |
4 |
+ |
27760321 |
HT1080 |
viability |
AAGTCCCATCCGACGAAAGGGG |
HTT |
ENSG00000197386 |
0.9415848785673537 |
[323,252] |
[246,191] |
5 |
hSpCas9 |
negative selection |
4742320 |
3172351 |
3172373 |
4 |
- |
27760321 |
HT1080 |
viability |
ATTGGTTCTCGACTAAAGCAGG |
HTT |
ENSG00000197386 |
-0.1938716941832619 |
[190,148] |
[52,65] |
-1 |
hSpCas9 |
negative selection |
4742321 |
3105365 |
3105387 |
4 |
- |
27760321 |
HT1080 |
viability |
GGCAGCACGCAAACTCCGAGGG |
HTT |
ENSG00000197386 |
1.0192323073038523 |
[417,325] |
[233,372] |
5 |
hSpCas9 |
negative selection |
4742322 |
3115347 |
3115369 |
4 |
- |
27760321 |
HT1080 |
viability |
GCCGCTGTCCGCCGAATGGTGG |
HTT |
ENSG00000197386 |
-0.5064858898630479 |
[623,486] |
[129,183] |
-2 |
hSpCas9 |
negative selection |
4742323 |
3136289 |
3136311 |
4 |
- |
27760321 |
HT29 |
viability after 7 days |
CGGCAACATGTCGCACCCTGGG |
HTT |
ENSG00000197386 |
0.659064100165392 |
[733,572] |
[1643,842,1529] |
8 |
hSpCas9 |
negative selection |
4825782 |
3154328 |
3154350 |
4 |
+ |
27760321 |
HT29 |
viability after 7 days |
AAGTCCCATCCGACGAAAGGGG |
HTT |
ENSG00000197386 |
0.003952037272774267 |
[323,252] |
[523,494,125] |
0 |
hSpCas9 |
negative selection |
4825783 |
3172351 |
3172373 |
4 |
- |
27760321 |
HT29 |
viability after 7 days |
ATTGGTTCTCGACTAAAGCAGG |
HTT |
ENSG00000197386 |
-0.6461664065995381 |
[190,148] |
[50,115,235] |
-7 |
hSpCas9 |
negative selection |
4825784 |
3105365 |
3105387 |
4 |
- |
27760321 |
HT29 |
viability after 7 days |
GGCAGCACGCAAACTCCGAGGG |
HTT |
ENSG00000197386 |
0.5909835613247945 |
[417,325] |
[625,714,802] |
8 |
hSpCas9 |
negative selection |
4825785 |
3115347 |
3115369 |
4 |
- |
27760321 |
HT29 |
viability after 7 days |
GCCGCTGTCCGCCGAATGGTGG |
HTT |
ENSG00000197386 |
0.36540657991414616 |
[623,486] |
[854,1049,846] |
5 |
hSpCas9 |
negative selection |
4825786 |
3136289 |
3136311 |
4 |
- |
27760321 |
HT29 |
viability after 25 days |
CGGCAACATGTCGCACCCTGGG |
HTT |
ENSG00000197386 |
0.8768134567115612 |
[733,572] |
[947,1344,1900] |
8 |
hSpCas9 |
negative selection |
4909245 |
3154328 |
3154350 |
4 |
+ |
27760321 |
HT29 |
viability after 25 days |
AAGTCCCATCCGACGAAAGGGG |
HTT |
ENSG00000197386 |
-0.6099632637569516 |
[323,252] |
[108,264,287] |
-5 |
hSpCas9 |
negative selection |
4909246 |
3172351 |
3172373 |
4 |
- |
27760321 |
HT29 |
viability after 25 days |
ATTGGTTCTCGACTAAAGCAGG |
HTT |
ENSG00000197386 |
-0.32756758555931786 |
[190,148] |
[140,212,105] |
-3 |
hSpCas9 |
negative selection |
4909247 |
3105365 |
3105387 |
4 |
- |
27760321 |
HT29 |
viability after 25 days |
GGCAGCACGCAAACTCCGAGGG |
HTT |
ENSG00000197386 |
-0.38719555867841016 |
[417,325] |
[146,391,460] |
-4 |
hSpCas9 |
negative selection |
4909248 |
3115347 |
3115369 |
4 |
- |
27760321 |
HT29 |
viability after 25 days |
GCCGCTGTCCGCCGAATGGTGG |
HTT |
ENSG00000197386 |
-1.1418342939465127 |
[623,486] |
[486,127,228] |
-7 |
hSpCas9 |
negative selection |
4909249 |
3136289 |
3136311 |
4 |
- |
27760321 |
HT29 |
viability after 22 days |
CGGCAACATGTCGCACCCTGGG |
HTT |
ENSG00000197386 |
0.7864631167658148 |
[733,572] |
[1271,1343,1293] |
8 |
hSpCas9 |
negative selection |
4992708 |
3154328 |
3154350 |
4 |
+ |
27760321 |
HT29 |
viability after 22 days |
AAGTCCCATCCGACGAAAGGGG |
HTT |
ENSG00000197386 |
-0.9221114376510052 |
[323,252] |
[88,201,239] |
-6 |
hSpCas9 |
negative selection |
4992709 |
3172351 |
3172373 |
4 |
- |
27760321 |
HT29 |
viability after 22 days |
ATTGGTTCTCGACTAAAGCAGG |
HTT |
ENSG00000197386 |
-0.4581622658075011 |
[190,148] |
[204,128,92] |
-4 |
hSpCas9 |
negative selection |
4992710 |
3105365 |
3105387 |
4 |
- |
27760321 |
HT29 |
viability after 22 days |
GGCAGCACGCAAACTCCGAGGG |
HTT |
ENSG00000197386 |
-0.832134807130283 |
[417,325] |
[218,289,215] |
-6 |
hSpCas9 |
negative selection |
4992711 |
3115347 |
3115369 |
4 |
- |
27760321 |
HT29 |
viability after 22 days |
GCCGCTGTCCGCCGAATGGTGG |
HTT |
ENSG00000197386 |
-1.3112261913080032 |
[623,486] |
[457,154,156] |
-7 |
hSpCas9 |
negative selection |
4992712 |
3136289 |
3136311 |
4 |
- |
27760321 |
HT29 |
viability after 19 days |
CGGCAACATGTCGCACCCTGGG |
HTT |
ENSG00000197386 |
1.0255954033306987 |
[733,572] |
[1580,1148,1827] |
9 |
hSpCas9 |
negative selection |
5076171 |
3154328 |
3154350 |
4 |
+ |
27760321 |
HT29 |
viability after 19 days |
AAGTCCCATCCGACGAAAGGGG |
HTT |
ENSG00000197386 |
-0.5452814391109765 |
[323,252] |
[179,257,234] |
-5 |
hSpCas9 |
negative selection |
5076172 |
3172351 |
3172373 |
4 |
- |
27760321 |
HT29 |
viability after 19 days |
ATTGGTTCTCGACTAAAGCAGG |
HTT |
ENSG00000197386 |
0.5151751449009491 |
[190,148] |
[180,330,309] |
5 |
hSpCas9 |
negative selection |
5076173 |
3105365 |
3105387 |
4 |
- |
27760321 |
HT29 |
viability after 19 days |
GGCAGCACGCAAACTCCGAGGG |
HTT |
ENSG00000197386 |
0.12733815339648852 |
[417,325] |
[392,280,702] |
1 |
hSpCas9 |
negative selection |
5076174 |
3115347 |
3115369 |
4 |
- |
27760321 |
HT29 |
viability after 19 days |
GCCGCTGTCCGCCGAATGGTGG |
HTT |
ENSG00000197386 |
-0.781409138087664 |
[623,486] |
[262,398,432] |
-6 |
hSpCas9 |
negative selection |
5076175 |
3136289 |
3136311 |
4 |
- |
27760321 |
HT29 |
viability after 16 days |
CGGCAACATGTCGCACCCTGGG |
HTT |
ENSG00000197386 |
0.9529411896668561 |
[733,572] |
[1300,1226,1711] |
9 |
hSpCas9 |
negative selection |
5159634 |
3154328 |
3154350 |
4 |
+ |
27760321 |
HT29 |
viability after 16 days |
AAGTCCCATCCGACGAAAGGGG |
HTT |
ENSG00000197386 |
-0.11468026127418107 |
[323,252] |
[402,229,272] |
-1 |
hSpCas9 |
negative selection |
5159635 |
3172351 |
3172373 |
4 |
- |
27760321 |
HT29 |
viability after 16 days |
ATTGGTTCTCGACTAAAGCAGG |
HTT |
ENSG00000197386 |
-0.1273319941928286 |
[190,148] |
[106,135,273] |
-1 |
hSpCas9 |
negative selection |
5159636 |
3105365 |
3105387 |
4 |
- |
27760321 |
HT29 |
viability after 16 days |
GGCAGCACGCAAACTCCGAGGG |
HTT |
ENSG00000197386 |
0.522838804493196 |
[417,325] |
[651,707,435] |
6 |
hSpCas9 |
negative selection |
5159637 |
3115347 |
3115369 |
4 |
- |
27760321 |
HT29 |
viability after 16 days |
GCCGCTGTCCGCCGAATGGTGG |
HTT |
ENSG00000197386 |
-0.8711474442992219 |
[623,486] |
[362,357,299] |
-6 |
hSpCas9 |
negative selection |
5159638 |
3136289 |
3136311 |
4 |
- |
27760321 |
HT29 |
viability after 13 days |
CGGCAACATGTCGCACCCTGGG |
HTT |
ENSG00000197386 |
0.742297608008586 |
[733,572] |
[1359,1068,1368] |
8 |
hSpCas9 |
negative selection |
5243097 |
3154328 |
3154350 |
4 |
+ |
27760321 |
HT29 |
viability after 13 days |
AAGTCCCATCCGACGAAAGGGG |
HTT |
ENSG00000197386 |
-0.028306633284178317 |
[323,252] |
[320,325,336] |
0 |
hSpCas9 |
negative selection |
5243098 |
3172351 |
3172373 |
4 |
- |
27760321 |
HT29 |
viability after 13 days |
ATTGGTTCTCGACTAAAGCAGG |
HTT |
ENSG00000197386 |
-0.42845344849417777 |
[190,148] |
[168,199,74] |
-5 |
hSpCas9 |
negative selection |
5243099 |
3105365 |
3105387 |
4 |
- |
27760321 |
HT29 |
viability after 13 days |
GGCAGCACGCAAACTCCGAGGG |
HTT |
ENSG00000197386 |
0.6457699449147208 |
[417,325] |
[860,744,433] |
8 |
hSpCas9 |
negative selection |
5243100 |
3115347 |
3115369 |
4 |
- |
27760321 |
HT29 |
viability after 13 days |
GCCGCTGTCCGCCGAATGGTGG |
HTT |
ENSG00000197386 |
0.012875762501860177 |
[623,486] |
[740,621,590] |
0 |
hSpCas9 |
negative selection |
5243101 |
3136289 |
3136311 |
4 |
- |
27760321 |
HT29 |
viability after 10 days |
CGGCAACATGTCGCACCCTGGG |
HTT |
ENSG00000197386 |
0.8148250674441518 |
[733,572] |
[1702,1080,1509] |
9 |
hSpCas9 |
negative selection |
5326560 |
3154328 |
3154350 |
4 |
+ |
27760321 |
HT29 |
viability after 10 days |
AAGTCCCATCCGACGAAAGGGG |
HTT |
ENSG00000197386 |
0.22266511809734787 |
[323,252] |
[264,450,542] |
3 |
hSpCas9 |
negative selection |
5326561 |
3172351 |
3172373 |
4 |
- |
27760321 |
HT29 |
viability after 10 days |
ATTGGTTCTCGACTAAAGCAGG |
HTT |
ENSG00000197386 |
-0.5658268746835091 |
[190,148] |
[135,203,92] |
-6 |
hSpCas9 |
negative selection |
5326562 |
3105365 |
3105387 |
4 |
- |
27760321 |
HT29 |
viability after 10 days |
GGCAGCACGCAAACTCCGAGGG |
HTT |
ENSG00000197386 |
1.1051312016734762 |
[417,325] |
[1146,829,1014] |
9 |
hSpCas9 |
negative selection |
5326563 |
3115347 |
3115369 |
4 |
- |
27760321 |
HT29 |
viability after 10 days |
GCCGCTGTCCGCCGAATGGTGG |
HTT |
ENSG00000197386 |
0.18762630769880384 |
[623,486] |
[980,712,675] |
2 |
hSpCas9 |
negative selection |
5326564 |
3136289 |
3136311 |
4 |
- |
27760321 |
MOLM13 |
viability |
CGGCAACATGTCGCACCCTGGG |
HTT |
ENSG00000197386 |
0.5854276117187871 |
[800,733] |
[500,775] |
4 |
hSpCas9 |
negative selection |
5410023 |
3154328 |
3154350 |
4 |
+ |
27760321 |
MOLM13 |
viability |
AAGTCCCATCCGACGAAAGGGG |
HTT |
ENSG00000197386 |
0.10447612861631594 |
[373,323] |
[336,103] |
0 |
hSpCas9 |
negative selection |
5410024 |
3172351 |
3172373 |
4 |
- |
27760321 |
MOLM13 |
viability |
ATTGGTTCTCGACTAAAGCAGG |
HTT |
ENSG00000197386 |
0.5720202727683481 |
[227,190] |
[46,283] |
4 |
hSpCas9 |
negative selection |
5410025 |
3105365 |
3105387 |
4 |
- |
27760321 |
MOLM13 |
viability |
GGCAGCACGCAAACTCCGAGGG |
HTT |
ENSG00000197386 |
-1.6240280346281617 |
[598,417] |
[84,97] |
-7 |
hSpCas9 |
negative selection |
5410026 |
3115347 |
3115369 |
4 |
- |
27760321 |
MOLM13 |
viability |
GCCGCTGTCCGCCGAATGGTGG |
HTT |
ENSG00000197386 |
-2.0359504282523195 |
[801,623] |
[64,124] |
-8 |
hSpCas9 |
negative selection |
5410027 |
3075112 |
3075135 |
4 |
- |
27661255 |
K562 |
viability |
GCCTGGGACCCGCCGGGACAGGG |
HTT |
ENSG00000197386 |
-0.16294140988896422 |
[522,520] |
[399,348] |
-5 |
dCas9-KRAB |
negative selection |
5485896 |
3075118 |
3075141 |
4 |
- |
27661255 |
K562 |
viability |
GCCGTAGCCTGGGACCCGCCGGG |
HTT |
ENSG00000197386 |
-0.048397219230635 |
[651,584] |
[536,428] |
-2 |
dCas9-KRAB |
negative selection |
5485897 |
3075075 |
3075098 |
4 |
- |
27260156 |
BXPC3 |
viability |
CAAACTCACGGTCGGTGCAGCGG |
HTT |
ENSG00000197386 |
0.19844724503574118 |
[597] |
[627,638,909,703] |
4 |
hSpCas9 |
negative selection |
5548558 |
3099336 |
3099359 |
4 |
+ |
27260156 |
BXPC3 |
viability |
ATGACGCAGAGTCAGATGTCAGG |
HTT |
ENSG00000197386 |
0.0873407147758033 |
[643] |
[568,629,811,889] |
2 |
hSpCas9 |
negative selection |
5548559 |
3074816 |
3074839 |
4 |
+ |
27260156 |
BXPC3 |
viability |
GGAGACCGCCATGGCGACCCTGG |
HTT |
ENSG00000197386 |
0.17041636735143095 |
[149] |
[131,102,216,274] |
4 |
hSpCas9 |
negative selection |
5548560 |
3086969 |
3086992 |
4 |
- |
27260156 |
BXPC3 |
viability |
TTGTCAGACAATGATTCACACGG |
HTT |
ENSG00000197386 |
0.017334687739768984 |
[724] |
[810,732,692,829] |
0 |
hSpCas9 |
negative selection |
5612816 |
3086987 |
3087010 |
4 |
+ |
27260156 |
BXPC3 |
viability |
GACAATATGTGAAAACATAGTGG |
HTT |
ENSG00000197386 |
-0.7034735606680094 |
[152] |
[75,87,124,107] |
-8 |
hSpCas9 |
negative selection |
5612817 |
3099281 |
3099304 |
4 |
- |
27260156 |
BXPC3 |
viability |
CCCAGAAGTTTCTGAAATTCTGG |
HTT |
ENSG00000197386 |
0.6513182780176321 |
[200] |
[337,281,334,369] |
9 |
hSpCas9 |
negative selection |
5612818 |
3075075 |
3075098 |
4 |
- |
27260156 |
A673 |
viability |
CAAACTCACGGTCGGTGCAGCGG |
HTT |
ENSG00000197386 |
-0.07437118782068253 |
[597] |
[671,758,653,635] |
-2 |
hSpCas9 |
negative selection |
5669809 |
3099336 |
3099359 |
4 |
+ |
27260156 |
A673 |
viability |
ATGACGCAGAGTCAGATGTCAGG |
HTT |
ENSG00000197386 |
0.012660200781249797 |
[643] |
[783,634,801,908] |
0 |
hSpCas9 |
negative selection |
5669810 |
3074816 |
3074839 |
4 |
+ |
27260156 |
A673 |
viability |
GGAGACCGCCATGGCGACCCTGG |
HTT |
ENSG00000197386 |
0.06558087519076916 |
[149] |
[294,105,150,217] |
1 |
hSpCas9 |
negative selection |
5669811 |
3086969 |
3086992 |
4 |
- |
27260156 |
A673 |
viability |
TTGTCAGACAATGATTCACACGG |
HTT |
ENSG00000197386 |
0.04618461788537065 |
[724] |
[910,770,961,956] |
1 |
hSpCas9 |
negative selection |
5734067 |
3086987 |
3087010 |
4 |
+ |
27260156 |
A673 |
viability |
GACAATATGTGAAAACATAGTGG |
HTT |
ENSG00000197386 |
-0.4493009893569011 |
[152] |
[180,107,165,85] |
-8 |
hSpCas9 |
negative selection |
5734068 |
3099281 |
3099304 |
4 |
- |
27260156 |
A673 |
viability |
CCCAGAAGTTTCTGAAATTCTGG |
HTT |
ENSG00000197386 |
0.417398873037789 |
[200] |
[350,440,265,225] |
8 |
hSpCas9 |
negative selection |
5734069 |
3075075 |
3075098 |
4 |
- |
27260156 |
A375 |
viability |
CAAACTCACGGTCGGTGCAGCGG |
HTT |
ENSG00000197386 |
-0.7572490906674784 |
[597] |
[443,517,437,281] |
-7 |
hSpCas9 |
negative selection |
5791060 |
3099336 |
3099359 |
4 |
+ |
27260156 |
A375 |
viability |
ATGACGCAGAGTCAGATGTCAGG |
HTT |
ENSG00000197386 |
0.20376894943780155 |
[643] |
[947,1025,915,623] |
3 |
hSpCas9 |
negative selection |
5791061 |
3074816 |
3074839 |
4 |
+ |
27260156 |
A375 |
viability |
GGAGACCGCCATGGCGACCCTGG |
HTT |
ENSG00000197386 |
0.1295986622811831 |
[149] |
[108,262,190,209] |
1 |
hSpCas9 |
negative selection |
5791062 |
3086969 |
3086992 |
4 |
- |
27260156 |
A375 |
viability |
TTGTCAGACAATGATTCACACGG |
HTT |
ENSG00000197386 |
-0.3320326782262092 |
[724] |
[672,543,823,633] |
-5 |
hSpCas9 |
negative selection |
5855318 |
3086987 |
3087010 |
4 |
+ |
27260156 |
A375 |
viability |
GACAATATGTGAAAACATAGTGG |
HTT |
ENSG00000197386 |
-1.3514943134368689 |
[152] |
[79,99,23,78] |
-9 |
hSpCas9 |
negative selection |
5855319 |
3099281 |
3099304 |
4 |
- |
27260156 |
A375 |
viability |
CCCAGAAGTTTCTGAAATTCTGG |
HTT |
ENSG00000197386 |
0.8709843107436257 |
[200] |
[384,638,220,491] |
9 |
hSpCas9 |
negative selection |
5855320 |
3075075 |
3075098 |
4 |
- |
27260156 |
COLO741 |
viability |
CAAACTCACGGTCGGTGCAGCGG |
HTT |
ENSG00000197386 |
-0.023273435621090577 |
[597] |
[796,658,797] |
0 |
hSpCas9 |
negative selection |
5912311 |
3099336 |
3099359 |
4 |
+ |
27260156 |
COLO741 |
viability |
ATGACGCAGAGTCAGATGTCAGG |
HTT |
ENSG00000197386 |
0.028692495294380116 |
[643] |
[805,972,741] |
0 |
hSpCas9 |
negative selection |
5912312 |
3074816 |
3074839 |
4 |
+ |
27260156 |
COLO741 |
viability |
GGAGACCGCCATGGCGACCCTGG |
HTT |
ENSG00000197386 |
0.16619448068296672 |
[149] |
[302,231,123] |
3 |
hSpCas9 |
negative selection |
5912313 |
3086969 |
3086992 |
4 |
- |
27260156 |
COLO741 |
viability |
TTGTCAGACAATGATTCACACGG |
HTT |
ENSG00000197386 |
-0.07013356601112952 |
[724] |
[1041,909,718] |
-1 |
hSpCas9 |
negative selection |
5976569 |
3086987 |
3087010 |
4 |
+ |
27260156 |
COLO741 |
viability |
GACAATATGTGAAAACATAGTGG |
HTT |
ENSG00000197386 |
-0.802316563044293 |
[152] |
[138,166,37] |
-9 |
hSpCas9 |
negative selection |
5976570 |
3099281 |
3099304 |
4 |
- |
27260156 |
COLO741 |
viability |
CCCAGAAGTTTCTGAAATTCTGG |
HTT |
ENSG00000197386 |
0.8633506462783944 |
[200] |
[654,486,287] |
9 |
hSpCas9 |
negative selection |
5976571 |
3075075 |
3075098 |
4 |
- |
27260156 |
CAL120 |
viability |
CAAACTCACGGTCGGTGCAGCGG |
HTT |
ENSG00000197386 |
-0.2882378219950221 |
[597] |
[640,657,534] |
-4 |
hSpCas9 |
negative selection |
6033562 |
3099336 |
3099359 |
4 |
+ |
27260156 |
CAL120 |
viability |
ATGACGCAGAGTCAGATGTCAGG |
HTT |
ENSG00000197386 |
0.24289308669272103 |
[643] |
[1275,898,722] |
3 |
hSpCas9 |
negative selection |
6033563 |
3074816 |
3074839 |
4 |
+ |
27260156 |
CAL120 |
viability |
GGAGACCGCCATGGCGACCCTGG |
HTT |
ENSG00000197386 |
-0.04049376665693272 |
[149] |
[117,187,227] |
0 |
hSpCas9 |
negative selection |
6033564 |
3086969 |
3086992 |
4 |
- |
27260156 |
CAL120 |
viability |
TTGTCAGACAATGATTCACACGG |
HTT |
ENSG00000197386 |
-0.13801096404813995 |
[724] |
[900,778,791] |
-2 |
hSpCas9 |
negative selection |
6097820 |
3086987 |
3087010 |
4 |
+ |
27260156 |
CAL120 |
viability |
GACAATATGTGAAAACATAGTGG |
HTT |
ENSG00000197386 |
-0.8205104822826021 |
[152] |
[85,64,167] |
-8 |
hSpCas9 |
negative selection |
6097821 |
3099281 |
3099304 |
4 |
- |
27260156 |
CAL120 |
viability |
CCCAGAAGTTTCTGAAATTCTGG |
HTT |
ENSG00000197386 |
0.8512382796289724 |
[200] |
[548,243,572] |
9 |
hSpCas9 |
negative selection |
6097822 |
3075075 |
3075098 |
4 |
- |
27260156 |
CADOES1 |
viability |
CAAACTCACGGTCGGTGCAGCGG |
HTT |
ENSG00000197386 |
-0.11209894920414609 |
[597] |
[585,487,498,483] |
-2 |
hSpCas9 |
negative selection |
6154813 |
3099336 |
3099359 |
4 |
+ |
27260156 |
CADOES1 |
viability |
ATGACGCAGAGTCAGATGTCAGG |
HTT |
ENSG00000197386 |
0.2799116419532258 |
[643] |
[698,585,706,923] |
5 |
hSpCas9 |
negative selection |
6154814 |
3074816 |
3074839 |
4 |
+ |
27260156 |
CADOES1 |
viability |
GGAGACCGCCATGGCGACCCTGG |
HTT |
ENSG00000197386 |
0.3528893925810328 |
[149] |
[303,186,78,140] |
6 |
hSpCas9 |
negative selection |
6154815 |
3086969 |
3086992 |
4 |
- |
27260156 |
CADOES1 |
viability |
TTGTCAGACAATGATTCACACGG |
HTT |
ENSG00000197386 |
0.15769314979215077 |
[724] |
[1016,494,602,897] |
2 |
hSpCas9 |
negative selection |
6219071 |
3086987 |
3087010 |
4 |
+ |
27260156 |
CADOES1 |
viability |
GACAATATGTGAAAACATAGTGG |
HTT |
ENSG00000197386 |
-0.38450664703984727 |
[152] |
[88,84,127,134] |
-6 |
hSpCas9 |
negative selection |
6219072 |
3099281 |
3099304 |
4 |
- |
27260156 |
CADOES1 |
viability |
CCCAGAAGTTTCTGAAATTCTGG |
HTT |
ENSG00000197386 |
0.3921590551265156 |
[200] |
[169,281,222,308] |
6 |
hSpCas9 |
negative selection |
6219073 |
3075075 |
3075098 |
4 |
- |
27260156 |
EWS502 |
viability |
CAAACTCACGGTCGGTGCAGCGG |
HTT |
ENSG00000197386 |
-0.6073567116580676 |
[597] |
[422,356,413,472] |
-7 |
hSpCas9 |
negative selection |
6276064 |
3099336 |
3099359 |
4 |
+ |
27260156 |
EWS502 |
viability |
ATGACGCAGAGTCAGATGTCAGG |
HTT |
ENSG00000197386 |
0.3229473278998749 |
[643] |
[723,625,1106,990] |
5 |
hSpCas9 |
negative selection |
6276065 |
3074816 |
3074839 |
4 |
+ |
27260156 |
EWS502 |
viability |
GGAGACCGCCATGGCGACCCTGG |
HTT |
ENSG00000197386 |
-0.07060278342477533 |
[149] |
[115,170,190,128] |
-1 |
hSpCas9 |
negative selection |
6276066 |
3086969 |
3086992 |
4 |
- |
27260156 |
EWS502 |
viability |
TTGTCAGACAATGATTCACACGG |
HTT |
ENSG00000197386 |
-0.15249132215458844 |
[724] |
[837,595,618,692] |
-3 |
hSpCas9 |
negative selection |
6340322 |
3086987 |
3087010 |
4 |
+ |
27260156 |
EWS502 |
viability |
GACAATATGTGAAAACATAGTGG |
HTT |
ENSG00000197386 |
-0.7096431162030654 |
[152] |
[107,51,111,126] |
-8 |
hSpCas9 |
negative selection |
6340323 |
3099281 |
3099304 |
4 |
- |
27260156 |
EWS502 |
viability |
CCCAGAAGTTTCTGAAATTCTGG |
HTT |
ENSG00000197386 |
0.45841490645560834 |
[200] |
[306,276,191,397] |
7 |
hSpCas9 |
negative selection |
6340324 |
3075075 |
3075098 |
4 |
- |
27260156 |
EW8 |
viability |
CAAACTCACGGTCGGTGCAGCGG |
HTT |
ENSG00000197386 |
-0.16054796109427188 |
[597] |
[466,416,323,546] |
-3 |
hSpCas9 |
negative selection |
6397315 |
3099336 |
3099359 |
4 |
+ |
27260156 |
EW8 |
viability |
ATGACGCAGAGTCAGATGTCAGG |
HTT |
ENSG00000197386 |
-0.12629530674605033 |
[643] |
[508,487,440,482] |
-2 |
hSpCas9 |
negative selection |
6397316 |
3074816 |
3074839 |
4 |
+ |
27260156 |
EW8 |
viability |
GGAGACCGCCATGGCGACCCTGG |
HTT |
ENSG00000197386 |
0.3372786810585984 |
[149] |
[131,171,108,205] |
6 |
hSpCas9 |
negative selection |
6397317 |
3086969 |
3086992 |
4 |
- |
27260156 |
EW8 |
viability |
TTGTCAGACAATGATTCACACGG |
HTT |
ENSG00000197386 |
0.015840692056260264 |
[724] |
[771,656,527,448] |
0 |
hSpCas9 |
negative selection |
6461573 |
3086987 |
3087010 |
4 |
+ |
27260156 |
EW8 |
viability |
GACAATATGTGAAAACATAGTGG |
HTT |
ENSG00000197386 |
-0.7804758889957115 |
[152] |
[50,49,65,119] |
-8 |
hSpCas9 |
negative selection |
6461574 |
3099281 |
3099304 |
4 |
- |
27260156 |
EW8 |
viability |
CCCAGAAGTTTCTGAAATTCTGG |
HTT |
ENSG00000197386 |
0.2552757456046906 |
[200] |
[229,252,191,106] |
5 |
hSpCas9 |
negative selection |
6461575 |
3075075 |
3075098 |
4 |
- |
27260156 |
CORL105 |
viability |
CAAACTCACGGTCGGTGCAGCGG |
HTT |
ENSG00000197386 |
-0.17895279735596895 |
[597] |
[790,480,779,455] |
-3 |
hSpCas9 |
negative selection |
6518566 |
3099336 |
3099359 |
4 |
+ |
27260156 |
CORL105 |
viability |
ATGACGCAGAGTCAGATGTCAGG |
HTT |
ENSG00000197386 |
-0.04212068782470968 |
[643] |
[690,735,875,646] |
-1 |
hSpCas9 |
negative selection |
6518567 |
3074816 |
3074839 |
4 |
+ |
27260156 |
CORL105 |
viability |
GGAGACCGCCATGGCGACCCTGG |
HTT |
ENSG00000197386 |
-0.0439861136717401 |
[149] |
[199,251,81,132] |
-1 |
hSpCas9 |
negative selection |
6518568 |
3086969 |
3086992 |
4 |
- |
27260156 |
CORL105 |
viability |
TTGTCAGACAATGATTCACACGG |
HTT |
ENSG00000197386 |
-0.07679573102616843 |
[724] |
[810,673,1004,762] |
-1 |
hSpCas9 |
negative selection |
6582824 |
3086987 |
3087010 |
4 |
+ |
27260156 |
CORL105 |
viability |
GACAATATGTGAAAACATAGTGG |
HTT |
ENSG00000197386 |
-0.5565919201569891 |
[152] |
[33,122,154,176] |
-7 |
hSpCas9 |
negative selection |
6582825 |
3099281 |
3099304 |
4 |
- |
27260156 |
CORL105 |
viability |
CCCAGAAGTTTCTGAAATTCTGG |
HTT |
ENSG00000197386 |
0.21115901694753192 |
[200] |
[215,267,294,311] |
4 |
hSpCas9 |
negative selection |
6582826 |
3075075 |
3075098 |
4 |
- |
27260156 |
HS294T |
viability |
CAAACTCACGGTCGGTGCAGCGG |
HTT |
ENSG00000197386 |
-0.5283263737036998 |
[597] |
[182,134,162,157] |
-6 |
hSpCas9 |
negative selection |
6639817 |
3099336 |
3099359 |
4 |
+ |
27260156 |
HS294T |
viability |
ATGACGCAGAGTCAGATGTCAGG |
HTT |
ENSG00000197386 |
0.7361347439991699 |
[643] |
[257,264,870,257] |
8 |
hSpCas9 |
negative selection |
6639818 |
3074816 |
3074839 |
4 |
+ |
27260156 |
HS294T |
viability |
GGAGACCGCCATGGCGACCCTGG |
HTT |
ENSG00000197386 |
-0.24395223643694397 |
[149] |
[49,52,45,45] |
-3 |
hSpCas9 |
negative selection |
6639819 |
3086969 |
3086992 |
4 |
- |
27260156 |
HS294T |
viability |
TTGTCAGACAATGATTCACACGG |
HTT |
ENSG00000197386 |
-0.11463113593222962 |
[724] |
[194,244,324,279] |
-2 |
hSpCas9 |
negative selection |
6704075 |
3086987 |
3087010 |
4 |
+ |
27260156 |
HS294T |
viability |
GACAATATGTGAAAACATAGTGG |
HTT |
ENSG00000197386 |
-1.5870443848363858 |
[152] |
[15,17,20,24] |
-9 |
hSpCas9 |
negative selection |
6704076 |
3099281 |
3099304 |
4 |
- |
27260156 |
HS294T |
viability |
CCCAGAAGTTTCTGAAATTCTGG |
HTT |
ENSG00000197386 |
0.09645737930140652 |
[200] |
[90,52,71,122] |
1 |
hSpCas9 |
negative selection |
6704077 |
3075075 |
3075098 |
4 |
- |
27260156 |
HCC44 |
viability |
CAAACTCACGGTCGGTGCAGCGG |
HTT |
ENSG00000197386 |
-0.6085773039394624 |
[597] |
[466,351,632,368] |
-7 |
hSpCas9 |
negative selection |
6761068 |
3099336 |
3099359 |
4 |
+ |
27260156 |
HCC44 |
viability |
ATGACGCAGAGTCAGATGTCAGG |
HTT |
ENSG00000197386 |
0.4164375727523496 |
[643] |
[999,897,902,1076] |
7 |
hSpCas9 |
negative selection |
6761069 |
3074816 |
3074839 |
4 |
+ |
27260156 |
HCC44 |
viability |
GGAGACCGCCATGGCGACCCTGG |
HTT |
ENSG00000197386 |
0.18562864047093974 |
[149] |
[334,32,376,95] |
3 |
hSpCas9 |
negative selection |
6761070 |
3086969 |
3086992 |
4 |
- |
27260156 |
HCC44 |
viability |
TTGTCAGACAATGATTCACACGG |
HTT |
ENSG00000197386 |
-0.18618321815592348 |
[724] |
[752,583,753,810] |
-3 |
hSpCas9 |
negative selection |
6825326 |
3086987 |
3087010 |
4 |
+ |
27260156 |
HCC44 |
viability |
GACAATATGTGAAAACATAGTGG |
HTT |
ENSG00000197386 |
-0.223471486020413 |
[152] |
[99,274,120,70] |
-4 |
hSpCas9 |
negative selection |
6825327 |
3099281 |
3099304 |
4 |
- |
27260156 |
HCC44 |
viability |
CCCAGAAGTTTCTGAAATTCTGG |
HTT |
ENSG00000197386 |
0.19995204416237677 |
[200] |
[195,342,346,156] |
3 |
hSpCas9 |
negative selection |
6825328 |
3075075 |
3075098 |
4 |
- |
27260156 |
G402 |
viability |
CAAACTCACGGTCGGTGCAGCGG |
HTT |
ENSG00000197386 |
-0.5980715289068779 |
[597] |
[798,629,202,354] |
-6 |
hSpCas9 |
negative selection |
6882319 |
3099336 |
3099359 |
4 |
+ |
27260156 |
G402 |
viability |
ATGACGCAGAGTCAGATGTCAGG |
HTT |
ENSG00000197386 |
0.17052914707291522 |
[643] |
[912,684,922,999] |
2 |
hSpCas9 |
negative selection |
6882320 |
3074816 |
3074839 |
4 |
+ |
27260156 |
G402 |
viability |
GGAGACCGCCATGGCGACCCTGG |
HTT |
ENSG00000197386 |
0.14966301672541493 |
[149] |
[428,204,131,83] |
2 |
hSpCas9 |
negative selection |
6882321 |
3086969 |
3086992 |
4 |
- |
27260156 |
G402 |
viability |
TTGTCAGACAATGATTCACACGG |
HTT |
ENSG00000197386 |
-0.5839947294867875 |
[724] |
[679,556,427,698] |
-6 |
hSpCas9 |
negative selection |
6946577 |
3086987 |
3087010 |
4 |
+ |
27260156 |
G402 |
viability |
GACAATATGTGAAAACATAGTGG |
HTT |
ENSG00000197386 |
-0.3024920486219207 |
[152] |
[291,113,127,91] |
-4 |
hSpCas9 |
negative selection |
6946578 |
3099281 |
3099304 |
4 |
- |
27260156 |
G402 |
viability |
CCCAGAAGTTTCTGAAATTCTGG |
HTT |
ENSG00000197386 |
1.0481290024946863 |
[200] |
[611,301,377,726] |
9 |
hSpCas9 |
negative selection |
6946579 |
3075075 |
3075098 |
4 |
- |
27260156 |
L33 |
viability |
CAAACTCACGGTCGGTGCAGCGG |
HTT |
ENSG00000197386 |
0.12131640316989317 |
[597] |
[625,238,386,775] |
2 |
hSpCas9 |
negative selection |
7003570 |
3099336 |
3099359 |
4 |
+ |
27260156 |
L33 |
viability |
ATGACGCAGAGTCAGATGTCAGG |
HTT |
ENSG00000197386 |
-0.08529098840051974 |
[643] |
[694,227,367,588] |
-2 |
hSpCas9 |
negative selection |
7003571 |
3074816 |
3074839 |
4 |
+ |
27260156 |
L33 |
viability |
GGAGACCGCCATGGCGACCCTGG |
HTT |
ENSG00000197386 |
-0.4476361885085056 |
[149] |
[87,66,53,102] |
-8 |
hSpCas9 |
negative selection |
7003572 |
3086969 |
3086992 |
4 |
- |
27260156 |
L33 |
viability |
TTGTCAGACAATGATTCACACGG |
HTT |
ENSG00000197386 |
0.1956734725749013 |
[724] |
[664,448,424,886] |
4 |
hSpCas9 |
negative selection |
7067828 |
3086987 |
3087010 |
4 |
+ |
27260156 |
L33 |
viability |
GACAATATGTGAAAACATAGTGG |
HTT |
ENSG00000197386 |
-0.3513196336912987 |
[152] |
[117,40,69,149] |
-7 |
hSpCas9 |
negative selection |
7067829 |
3099281 |
3099304 |
4 |
- |
27260156 |
L33 |
viability |
CCCAGAAGTTTCTGAAATTCTGG |
HTT |
ENSG00000197386 |
0.38670932873944086 |
[200] |
[288,95,188,226] |
7 |
hSpCas9 |
negative selection |
7067830 |
3075075 |
3075098 |
4 |
- |
27260156 |
K562 |
viability |
CAAACTCACGGTCGGTGCAGCGG |
HTT |
ENSG00000197386 |
-0.6729233727769642 |
[597] |
[333,628,184,211] |
-7 |
hSpCas9 |
negative selection |
7124821 |
3099336 |
3099359 |
4 |
+ |
27260156 |
K562 |
viability |
ATGACGCAGAGTCAGATGTCAGG |
HTT |
ENSG00000197386 |
0.16433320194328815 |
[643] |
[775,923,526,387] |
2 |
hSpCas9 |
negative selection |
7124822 |
3074816 |
3074839 |
4 |
+ |
27260156 |
K562 |
viability |
GGAGACCGCCATGGCGACCCTGG |
HTT |
ENSG00000197386 |
0.8217809765039211 |
[149] |
[166,122,198,417] |
9 |
hSpCas9 |
negative selection |
7124823 |
3086969 |
3086992 |
4 |
- |
27260156 |
K562 |
viability |
TTGTCAGACAATGATTCACACGG |
HTT |
ENSG00000197386 |
0.5220104183565495 |
[724] |
[575,1032,1335,744] |
6 |
hSpCas9 |
negative selection |
7189079 |
3086987 |
3087010 |
4 |
+ |
27260156 |
K562 |
viability |
GACAATATGTGAAAACATAGTGG |
HTT |
ENSG00000197386 |
-0.3734098842458278 |
[152] |
[19,37,62,267] |
-4 |
hSpCas9 |
negative selection |
7189080 |
3099281 |
3099304 |
4 |
- |
27260156 |
K562 |
viability |
CCCAGAAGTTTCTGAAATTCTGG |
HTT |
ENSG00000197386 |
0.7163066705849864 |
[200] |
[359,356,293,181] |
8 |
hSpCas9 |
negative selection |
7189081 |
3075075 |
3075098 |
4 |
- |
27260156 |
HT29 |
viability |
CAAACTCACGGTCGGTGCAGCGG |
HTT |
ENSG00000197386 |
-0.1967336472913058 |
[597] |
[749,588,613,589] |
-4 |
hSpCas9 |
negative selection |
7246072 |
3099336 |
3099359 |
4 |
+ |
27260156 |
HT29 |
viability |
ATGACGCAGAGTCAGATGTCAGG |
HTT |
ENSG00000197386 |
0.0808220303378665 |
[643] |
[1124,866,619,731] |
1 |
hSpCas9 |
negative selection |
7246073 |
3074816 |
3074839 |
4 |
+ |
27260156 |
HT29 |
viability |
GGAGACCGCCATGGCGACCCTGG |
HTT |
ENSG00000197386 |
-0.04967381994283726 |
[149] |
[202,226,194,94] |
-1 |
hSpCas9 |
negative selection |
7246074 |
3086969 |
3086992 |
4 |
- |
27260156 |
HT29 |
viability |
TTGTCAGACAATGATTCACACGG |
HTT |
ENSG00000197386 |
-0.01383480232960177 |
[724] |
[898,986,961,673] |
0 |
hSpCas9 |
negative selection |
7310330 |
3086987 |
3087010 |
4 |
+ |
27260156 |
HT29 |
viability |
GACAATATGTGAAAACATAGTGG |
HTT |
ENSG00000197386 |
-0.8362135846290484 |
[152] |
[109,123,123,64] |
-8 |
hSpCas9 |
negative selection |
7310331 |
3099281 |
3099304 |
4 |
- |
27260156 |
HT29 |
viability |
CCCAGAAGTTTCTGAAATTCTGG |
HTT |
ENSG00000197386 |
0.47995823633970924 |
[200] |
[330,374,245,402] |
8 |
hSpCas9 |
negative selection |
7310332 |
3075075 |
3075098 |
4 |
- |
27260156 |
MHHES1 |
viability |
CAAACTCACGGTCGGTGCAGCGG |
HTT |
ENSG00000197386 |
-0.2128646431415436 |
[597] |
[551,660,722,418] |
-4 |
hSpCas9 |
negative selection |
7367323 |
3099336 |
3099359 |
4 |
+ |
27260156 |
MHHES1 |
viability |
ATGACGCAGAGTCAGATGTCAGG |
HTT |
ENSG00000197386 |
-0.17444678680131465 |
[643] |
[721,858,576,469] |
-3 |
hSpCas9 |
negative selection |
7367324 |
3074816 |
3074839 |
4 |
+ |
27260156 |
MHHES1 |
viability |
GGAGACCGCCATGGCGACCCTGG |
HTT |
ENSG00000197386 |
-0.11199609253321374 |
[149] |
[144,182,199,106] |
-2 |
hSpCas9 |
negative selection |
7367325 |
3086969 |
3086992 |
4 |
- |
27260156 |
MHHES1 |
viability |
TTGTCAGACAATGATTCACACGG |
HTT |
ENSG00000197386 |
-0.2922252215190054 |
[724] |
[717,726,782,480] |
-5 |
hSpCas9 |
negative selection |
7431581 |
3086987 |
3087010 |
4 |
+ |
27260156 |
MHHES1 |
viability |
GACAATATGTGAAAACATAGTGG |
HTT |
ENSG00000197386 |
-0.24859953562194992 |
[152] |
[281,63,104,135] |
-5 |
hSpCas9 |
negative selection |
7431582 |
3099281 |
3099304 |
4 |
- |
27260156 |
MHHES1 |
viability |
CCCAGAAGTTTCTGAAATTCTGG |
HTT |
ENSG00000197386 |
0.27274493246779363 |
[200] |
[467,214,297,152] |
5 |
hSpCas9 |
negative selection |
7431583 |
3075075 |
3075098 |
4 |
- |
27260156 |
MEWO |
viability |
CAAACTCACGGTCGGTGCAGCGG |
HTT |
ENSG00000197386 |
-0.5012901755546446 |
[597] |
[437,382,372] |
-8 |
hSpCas9 |
negative selection |
7488574 |
3099336 |
3099359 |
4 |
+ |
27260156 |
MEWO |
viability |
ATGACGCAGAGTCAGATGTCAGG |
HTT |
ENSG00000197386 |
0.01975175111188815 |
[643] |
[642,512,682] |
0 |
hSpCas9 |
negative selection |
7488575 |
3074816 |
3074839 |
4 |
+ |
27260156 |
MEWO |
viability |
GGAGACCGCCATGGCGACCCTGG |
HTT |
ENSG00000197386 |
-0.17321825726281737 |
[149] |
[168,118,93] |
-4 |
hSpCas9 |
negative selection |
7488576 |
3086969 |
3086992 |
4 |
- |
27260156 |
MEWO |
viability |
TTGTCAGACAATGATTCACACGG |
HTT |
ENSG00000197386 |
0.16981874697231147 |
[724] |
[888,818,604] |
4 |
hSpCas9 |
negative selection |
7552832 |
3086987 |
3087010 |
4 |
+ |
27260156 |
MEWO |
viability |
GACAATATGTGAAAACATAGTGG |
HTT |
ENSG00000197386 |
-1.1768543705683203 |
[152] |
[68,68,52] |
-9 |
hSpCas9 |
negative selection |
7552833 |
3099281 |
3099304 |
4 |
- |
27260156 |
MEWO |
viability |
CCCAGAAGTTTCTGAAATTCTGG |
HTT |
ENSG00000197386 |
0.2759338299433658 |
[200] |
[201,232,242] |
6 |
hSpCas9 |
negative selection |
7552834 |
3075075 |
3075098 |
4 |
- |
27260156 |
LNCAPCLONEFGC |
viability |
CAAACTCACGGTCGGTGCAGCGG |
HTT |
ENSG00000197386 |
-0.4477155598165026 |
[597] |
[323,344,603,350] |
-6 |
hSpCas9 |
negative selection |
7609825 |
3099336 |
3099359 |
4 |
+ |
27260156 |
LNCAPCLONEFGC |
viability |
ATGACGCAGAGTCAGATGTCAGG |
HTT |
ENSG00000197386 |
0.07423416421427842 |
[643] |
[603,582,650,625] |
1 |
hSpCas9 |
negative selection |
7609826 |
3074816 |
3074839 |
4 |
+ |
27260156 |
LNCAPCLONEFGC |
viability |
GGAGACCGCCATGGCGACCCTGG |
HTT |
ENSG00000197386 |
-0.5077421554821788 |
[149] |
[66,141,63,101] |
-7 |
hSpCas9 |
negative selection |
7609827 |
3086969 |
3086992 |
4 |
- |
27260156 |
LNCAPCLONEFGC |
viability |
TTGTCAGACAATGATTCACACGG |
HTT |
ENSG00000197386 |
-0.2544002856749766 |
[724] |
[493,537,618,562] |
-4 |
hSpCas9 |
negative selection |
7674083 |
3086987 |
3087010 |
4 |
+ |
27260156 |
LNCAPCLONEFGC |
viability |
GACAATATGTGAAAACATAGTGG |
HTT |
ENSG00000197386 |
-0.49368137955118097 |
[152] |
[125,77,74,111] |
-6 |
hSpCas9 |
negative selection |
7674084 |
3099281 |
3099304 |
4 |
- |
27260156 |
LNCAPCLONEFGC |
viability |
CCCAGAAGTTTCTGAAATTCTGG |
HTT |
ENSG00000197386 |
0.8543978732008934 |
[200] |
[381,164,521,285] |
9 |
hSpCas9 |
negative selection |
7674085 |
3075075 |
3075098 |
4 |
- |
27260156 |
PANC0327 |
viability |
CAAACTCACGGTCGGTGCAGCGG |
HTT |
ENSG00000197386 |
-0.2591985690221532 |
[597] |
[418,570,484,281] |
-4 |
hSpCas9 |
negative selection |
7731076 |
3099336 |
3099359 |
4 |
+ |
27260156 |
PANC0327 |
viability |
ATGACGCAGAGTCAGATGTCAGG |
HTT |
ENSG00000197386 |
0.3734833103131032 |
[643] |
[1133,674,684,510] |
5 |
hSpCas9 |
negative selection |
7731077 |
3074816 |
3074839 |
4 |
+ |
27260156 |
PANC0327 |
viability |
GGAGACCGCCATGGCGACCCTGG |
HTT |
ENSG00000197386 |
-0.3885308016522184 |
[149] |
[80,143,107,66] |
-5 |
hSpCas9 |
negative selection |
7731078 |
3086969 |
3086992 |
4 |
- |
27260156 |
PANC0327 |
viability |
TTGTCAGACAATGATTCACACGG |
HTT |
ENSG00000197386 |
0.08897136757088253 |
[724] |
[726,546,1134,352] |
1 |
hSpCas9 |
negative selection |
7795334 |
3086987 |
3087010 |
4 |
+ |
27260156 |
PANC0327 |
viability |
GACAATATGTGAAAACATAGTGG |
HTT |
ENSG00000197386 |
-0.12232514315808762 |
[152] |
[116,145,103,128] |
-2 |
hSpCas9 |
negative selection |
7795335 |
3099281 |
3099304 |
4 |
- |
27260156 |
PANC0327 |
viability |
CCCAGAAGTTTCTGAAATTCTGG |
HTT |
ENSG00000197386 |
0.4235383896562511 |
[200] |
[347,207,312,101] |
6 |
hSpCas9 |
negative selection |
7795336 |
3075075 |
3075098 |
4 |
- |
27260156 |
NCIH2009 |
viability |
CAAACTCACGGTCGGTGCAGCGG |
HTT |
ENSG00000197386 |
-0.4553730261445674 |
[597] |
[694,605,542] |
-5 |
hSpCas9 |
negative selection |
7852327 |
3099336 |
3099359 |
4 |
+ |
27260156 |
NCIH2009 |
viability |
ATGACGCAGAGTCAGATGTCAGG |
HTT |
ENSG00000197386 |
0.2913378002779924 |
[643] |
[1221,900,1205] |
4 |
hSpCas9 |
negative selection |
7852328 |
3074816 |
3074839 |
4 |
+ |
27260156 |
NCIH2009 |
viability |
GGAGACCGCCATGGCGACCCTGG |
HTT |
ENSG00000197386 |
0.006245461811316577 |
[149] |
[280,156,207] |
0 |
hSpCas9 |
negative selection |
7852329 |
3086969 |
3086992 |
4 |
- |
27260156 |
NCIH2009 |
viability |
TTGTCAGACAATGATTCACACGG |
HTT |
ENSG00000197386 |
-0.1201825122030511 |
[724] |
[993,799,1014] |
-2 |
hSpCas9 |
negative selection |
7916585 |
3086987 |
3087010 |
4 |
+ |
27260156 |
NCIH2009 |
viability |
GACAATATGTGAAAACATAGTGG |
HTT |
ENSG00000197386 |
-0.7501851990566191 |
[152] |
[133,94,153] |
-7 |
hSpCas9 |
negative selection |
7916586 |
3099281 |
3099304 |
4 |
- |
27260156 |
NCIH2009 |
viability |
CCCAGAAGTTTCTGAAATTCTGG |
HTT |
ENSG00000197386 |
-0.074169393147135 |
[200] |
[290,189,324] |
-1 |
hSpCas9 |
negative selection |
7916587 |
3075075 |
3075098 |
4 |
- |
27260156 |
NCIH1373 |
viability |
CAAACTCACGGTCGGTGCAGCGG |
HTT |
ENSG00000197386 |
-0.40889569878666104 |
[597] |
[632,428,340,171] |
-4 |
hSpCas9 |
negative selection |
7973578 |
3099336 |
3099359 |
4 |
+ |
27260156 |
NCIH1373 |
viability |
ATGACGCAGAGTCAGATGTCAGG |
HTT |
ENSG00000197386 |
0.1756949991908906 |
[643] |
[1758,321,805,145] |
1 |
hSpCas9 |
negative selection |
7973579 |
3074816 |
3074839 |
4 |
+ |
27260156 |
NCIH1373 |
viability |
GGAGACCGCCATGGCGACCCTGG |
HTT |
ENSG00000197386 |
2.093470447215314 |
[149] |
[2376,381,177,53] |
9 |
hSpCas9 |
negative selection |
7973580 |
3086969 |
3086992 |
4 |
- |
27260156 |
NCIH1373 |
viability |
TTGTCAGACAATGATTCACACGG |
HTT |
ENSG00000197386 |
0.3273100736383532 |
[724] |
[962,1166,602,352] |
3 |
hSpCas9 |
negative selection |
8037836 |
3086987 |
3087010 |
4 |
+ |
27260156 |
NCIH1373 |
viability |
GACAATATGTGAAAACATAGTGG |
HTT |
ENSG00000197386 |
-0.9781960549459023 |
[152] |
[28,204,33,14] |
-7 |
hSpCas9 |
negative selection |
8037837 |
3099281 |
3099304 |
4 |
- |
27260156 |
NCIH1373 |
viability |
CCCAGAAGTTTCTGAAATTCTGG |
HTT |
ENSG00000197386 |
0.7501892715724527 |
[200] |
[244,257,263,200] |
7 |
hSpCas9 |
negative selection |
8037838 |
3075075 |
3075098 |
4 |
- |
27260156 |
PATU8902 |
viability |
CAAACTCACGGTCGGTGCAGCGG |
HTT |
ENSG00000197386 |
-1.374505977758618 |
[597] |
[365,164,285,493] |
-8 |
hSpCas9 |
negative selection |
8094829 |
3099336 |
3099359 |
4 |
+ |
27260156 |
PATU8902 |
viability |
ATGACGCAGAGTCAGATGTCAGG |
HTT |
ENSG00000197386 |
0.054472019227634005 |
[643] |
[1260,873,761,850] |
0 |
hSpCas9 |
negative selection |
8094830 |
3074816 |
3074839 |
4 |
+ |
27260156 |
PATU8902 |
viability |
GGAGACCGCCATGGCGACCCTGG |
HTT |
ENSG00000197386 |
-0.1183519013754819 |
[149] |
[174,109,56,497] |
-1 |
hSpCas9 |
negative selection |
8094831 |
3086969 |
3086992 |
4 |
- |
27260156 |
PATU8902 |
viability |
TTGTCAGACAATGATTCACACGG |
HTT |
ENSG00000197386 |
-0.4915350071151397 |
[724] |
[501,1162,427,871] |
-5 |
hSpCas9 |
negative selection |
8159087 |
3086987 |
3087010 |
4 |
+ |
27260156 |
PATU8902 |
viability |
GACAATATGTGAAAACATAGTGG |
HTT |
ENSG00000197386 |
-0.9479204947770079 |
[152] |
[208,170,49,13] |
-7 |
hSpCas9 |
negative selection |
8159088 |
3099281 |
3099304 |
4 |
- |
27260156 |
PATU8902 |
viability |
CCCAGAAGTTTCTGAAATTCTGG |
HTT |
ENSG00000197386 |
0.7087747810930431 |
[200] |
[383,715,252,537] |
7 |
hSpCas9 |
negative selection |
8159089 |
3075075 |
3075098 |
4 |
- |
27260156 |
PANC1 |
viability |
CAAACTCACGGTCGGTGCAGCGG |
HTT |
ENSG00000197386 |
-0.2610444889844594 |
[597] |
[415,508,458,352] |
-4 |
hSpCas9 |
negative selection |
8216080 |
3099336 |
3099359 |
4 |
+ |
27260156 |
PANC1 |
viability |
ATGACGCAGAGTCAGATGTCAGG |
HTT |
ENSG00000197386 |
0.40129942297816124 |
[643] |
[626,1300,636,501] |
6 |
hSpCas9 |
negative selection |
8216081 |
3074816 |
3074839 |
4 |
+ |
27260156 |
PANC1 |
viability |
GGAGACCGCCATGGCGACCCTGG |
HTT |
ENSG00000197386 |
0.27528579205115555 |
[149] |
[84,269,214,87] |
4 |
hSpCas9 |
negative selection |
8216082 |
3086969 |
3086992 |
4 |
- |
27260156 |
PANC1 |
viability |
TTGTCAGACAATGATTCACACGG |
HTT |
ENSG00000197386 |
0.07528150967417557 |
[724] |
[624,693,688,619] |
1 |
hSpCas9 |
negative selection |
8280338 |
3086987 |
3087010 |
4 |
+ |
27260156 |
PANC1 |
viability |
GACAATATGTGAAAACATAGTGG |
HTT |
ENSG00000197386 |
-0.539316180110496 |
[152] |
[67,124,138,43] |
-7 |
hSpCas9 |
negative selection |
8280339 |
3099281 |
3099304 |
4 |
- |
27260156 |
PANC1 |
viability |
CCCAGAAGTTTCTGAAATTCTGG |
HTT |
ENSG00000197386 |
0.5477709536794766 |
[200] |
[437,235,107,219] |
8 |
hSpCas9 |
negative selection |
8280340 |
3075075 |
3075098 |
4 |
- |
27260156 |
PANC0813 |
viability |
CAAACTCACGGTCGGTGCAGCGG |
HTT |
ENSG00000197386 |
0.2459384913656011 |
[597] |
[916,888,875,665] |
4 |
hSpCas9 |
negative selection |
8337331 |
3099336 |
3099359 |
4 |
+ |
27260156 |
PANC0813 |
viability |
ATGACGCAGAGTCAGATGTCAGG |
HTT |
ENSG00000197386 |
0.29201861551094777 |
[643] |
[1156,1086,678,806] |
5 |
hSpCas9 |
negative selection |
8337332 |
3074816 |
3074839 |
4 |
+ |
27260156 |
PANC0813 |
viability |