166013837 |
166013860 |
2 |
- |
26472758 |
Jiyoye |
viability |
AAGAAGGCAGAGGAAAACAATGG |
SCN1A |
ENSG00000144285 |
1.1076150996469654 |
[15] |
[25] |
7 |
hSpCas9 |
negative selection |
143019 |
166036412 |
166036435 |
2 |
- |
26472758 |
Jiyoye |
viability |
GCTGTGGATAGGATGCACAAAGG |
SCN1A |
ENSG00000144285 |
-0.4955274171392116 |
[128] |
[68] |
-4 |
hSpCas9 |
negative selection |
143020 |
166046823 |
166046846 |
2 |
- |
26472758 |
Jiyoye |
viability |
GGAAGAAGCAGAACAGAAAGAGG |
SCN1A |
ENSG00000144285 |
0.8640330564793443 |
[101] |
[139] |
6 |
hSpCas9 |
negative selection |
143021 |
166045202 |
166045225 |
2 |
- |
26472758 |
Jiyoye |
viability |
CTAAGGAAAGAAGAAATCGGAGG |
SCN1A |
ENSG00000144285 |
-0.21323595521957256 |
[102] |
[66] |
-1 |
hSpCas9 |
negative selection |
143022 |
166045170 |
166045193 |
2 |
- |
26472758 |
Jiyoye |
viability |
AAACAGAAAGAGCAGTCTGGTGG |
SCN1A |
ENSG00000144285 |
0.20108477249852563 |
[307] |
[266] |
1 |
hSpCas9 |
negative selection |
143023 |
166045112 |
166045135 |
2 |
- |
26472758 |
Jiyoye |
viability |
AATCTGAGGACAGCATCAGGAGG |
SCN1A |
ENSG00000144285 |
-0.3863737410267002 |
[103] |
[59] |
-3 |
hSpCas9 |
negative selection |
143024 |
166045034 |
166045057 |
2 |
+ |
26472758 |
Jiyoye |
viability |
GTGCCATACCTGGTGTGGGGAGG |
SCN1A |
ENSG00000144285 |
-0.36753230665188386 |
[141] |
[82] |
-3 |
hSpCas9 |
negative selection |
143025 |
166044011 |
166044034 |
2 |
- |
26472758 |
Jiyoye |
viability |
GTGGCTCCCTATTTTCACCAAGG |
SCN1A |
ENSG00000144285 |
0.07540696399095803 |
[330] |
[262] |
0 |
hSpCas9 |
negative selection |
143026 |
166038019 |
166038042 |
2 |
+ |
26472758 |
Jiyoye |
viability |
GACGATGATGGCCAAGACGAGGG |
SCN1A |
ENSG00000144285 |
-0.2243297051523131 |
[188] |
[121] |
-2 |
hSpCas9 |
negative selection |
143027 |
166037986 |
166038009 |
2 |
+ |
26472758 |
Jiyoye |
viability |
AAAGAGCTGCATGCCGACCACGG |
SCN1A |
ENSG00000144285 |
-0.46037432247047705 |
[103] |
[56] |
-3 |
hSpCas9 |
negative selection |
143031 |
166013837 |
166013860 |
2 |
- |
26472758 |
KBM7 |
viability |
AAGAAGGCAGAGGAAAACAATGG |
SCN1A |
ENSG00000144285 |
-0.11268111803376302 |
[57,100] |
[31,38] |
-1 |
hSpCas9 |
negative selection |
334137 |
166036412 |
166036435 |
2 |
- |
26472758 |
KBM7 |
viability |
GCTGTGGATAGGATGCACAAAGG |
SCN1A |
ENSG00000144285 |
0.5741437217944548 |
[400,540] |
[452,231] |
6 |
hSpCas9 |
negative selection |
334138 |
166046823 |
166046846 |
2 |
- |
26472758 |
KBM7 |
viability |
GGAAGAAGCAGAACAGAAAGAGG |
SCN1A |
ENSG00000144285 |
0.3294973351861957 |
[345,297] |
[194,184] |
3 |
hSpCas9 |
negative selection |
334139 |
166045202 |
166045225 |
2 |
- |
26472758 |
KBM7 |
viability |
CTAAGGAAAGAAGAAATCGGAGG |
SCN1A |
ENSG00000144285 |
0.8989513851321758 |
[406,282] |
[441,169] |
8 |
hSpCas9 |
negative selection |
334140 |
166045170 |
166045193 |
2 |
- |
26472758 |
KBM7 |
viability |
AAACAGAAAGAGCAGTCTGGTGG |
SCN1A |
ENSG00000144285 |
0.51014146641106 |
[910,849] |
[818,385] |
5 |
hSpCas9 |
negative selection |
334141 |
166045112 |
166045135 |
2 |
- |
26472758 |
KBM7 |
viability |
AATCTGAGGACAGCATCAGGAGG |
SCN1A |
ENSG00000144285 |
0.6590689716061013 |
[494,285] |
[322,247] |
7 |
hSpCas9 |
negative selection |
334142 |
166045034 |
166045057 |
2 |
+ |
26472758 |
KBM7 |
viability |
GTGCCATACCTGGTGTGGGGAGG |
SCN1A |
ENSG00000144285 |
-0.06862023590400056 |
[508,492] |
[265,188] |
0 |
hSpCas9 |
negative selection |
334143 |
166044011 |
166044034 |
2 |
- |
26472758 |
KBM7 |
viability |
GTGGCTCCCTATTTTCACCAAGG |
SCN1A |
ENSG00000144285 |
0.4822424624914914 |
[1186,1103] |
[606,883] |
5 |
hSpCas9 |
negative selection |
334144 |
166038019 |
166038042 |
2 |
+ |
26472758 |
KBM7 |
viability |
GACGATGATGGCCAAGACGAGGG |
SCN1A |
ENSG00000144285 |
0.3776280297229919 |
[1007,1065] |
[791,500] |
4 |
hSpCas9 |
negative selection |
334145 |
166037986 |
166038009 |
2 |
+ |
26472758 |
KBM7 |
viability |
AAAGAGCTGCATGCCGACCACGG |
SCN1A |
ENSG00000144285 |
-0.21345709363104193 |
[418,312] |
[147,145] |
-2 |
hSpCas9 |
negative selection |
334149 |
166013837 |
166013860 |
2 |
- |
26472758 |
Raji |
viability |
AAGAAGGCAGAGGAAAACAATGG |
SCN1A |
ENSG00000144285 |
-0.050157741612880447 |
[57] |
[12] |
0 |
hSpCas9 |
negative selection |
525255 |
166036412 |
166036435 |
2 |
- |
26472758 |
Raji |
viability |
GCTGTGGATAGGATGCACAAAGG |
SCN1A |
ENSG00000144285 |
0.7288719121198697 |
[207] |
[79] |
6 |
hSpCas9 |
negative selection |
525256 |
166046823 |
166046846 |
2 |
- |
26472758 |
Raji |
viability |
GGAAGAAGCAGAACAGAAAGAGG |
SCN1A |
ENSG00000144285 |
0.6199375405667057 |
[142] |
[50] |
6 |
hSpCas9 |
negative selection |
525257 |
166045202 |
166045225 |
2 |
- |
26472758 |
Raji |
viability |
CTAAGGAAAGAAGAAATCGGAGG |
SCN1A |
ENSG00000144285 |
-0.36770134757518336 |
[138] |
[24] |
-3 |
hSpCas9 |
negative selection |
525258 |
166045170 |
166045193 |
2 |
- |
26472758 |
Raji |
viability |
AAACAGAAAGAGCAGTCTGGTGG |
SCN1A |
ENSG00000144285 |
0.8359707117404839 |
[448] |
[185] |
7 |
hSpCas9 |
negative selection |
525259 |
166045112 |
166045135 |
2 |
- |
26472758 |
Raji |
viability |
AATCTGAGGACAGCATCAGGAGG |
SCN1A |
ENSG00000144285 |
0.5224210346524433 |
[107] |
[35] |
5 |
hSpCas9 |
negative selection |
525260 |
166045034 |
166045057 |
2 |
+ |
26472758 |
Raji |
viability |
GTGCCATACCTGGTGTGGGGAGG |
SCN1A |
ENSG00000144285 |
1.122980390424618 |
[183] |
[92] |
8 |
hSpCas9 |
negative selection |
525261 |
166044011 |
166044034 |
2 |
- |
26472758 |
Raji |
viability |
GTGGCTCCCTATTTTCACCAAGG |
SCN1A |
ENSG00000144285 |
0.7420523163118344 |
[522] |
[202] |
7 |
hSpCas9 |
negative selection |
525262 |
166038019 |
166038042 |
2 |
+ |
26472758 |
Raji |
viability |
GACGATGATGGCCAAGACGAGGG |
SCN1A |
ENSG00000144285 |
-0.09255403513515248 |
[339] |
[73] |
-1 |
hSpCas9 |
negative selection |
525263 |
166037986 |
166038009 |
2 |
+ |
26472758 |
Raji |
viability |
AAAGAGCTGCATGCCGACCACGG |
SCN1A |
ENSG00000144285 |
-0.10021188403476783 |
[193] |
[41] |
-1 |
hSpCas9 |
negative selection |
525267 |
166013837 |
166013860 |
2 |
- |
26472758 |
K562 |
viability |
AAGAAGGCAGAGGAAAACAATGG |
SCN1A |
ENSG00000144285 |
-0.3405437730547094 |
[92] |
[61] |
-2 |
hSpCas9 |
negative selection |
716373 |
166036412 |
166036435 |
2 |
- |
26472758 |
K562 |
viability |
GCTGTGGATAGGATGCACAAAGG |
SCN1A |
ENSG00000144285 |
-0.35292749751054175 |
[350] |
[231] |
-2 |
hSpCas9 |
negative selection |
716374 |
166046823 |
166046846 |
2 |
- |
26472758 |
K562 |
viability |
GGAAGAAGCAGAACAGAAAGAGG |
SCN1A |
ENSG00000144285 |
0.6331158347665102 |
[303] |
[397] |
5 |
hSpCas9 |
negative selection |
716375 |
166045202 |
166045225 |
2 |
- |
26472758 |
K562 |
viability |
CTAAGGAAAGAAGAAATCGGAGG |
SCN1A |
ENSG00000144285 |
1.3763758789097387 |
[307] |
[674] |
9 |
hSpCas9 |
negative selection |
716376 |
166045170 |
166045193 |
2 |
- |
26472758 |
K562 |
viability |
AAACAGAAAGAGCAGTCTGGTGG |
SCN1A |
ENSG00000144285 |
0.4169328505026082 |
[865] |
[975] |
3 |
hSpCas9 |
negative selection |
716377 |
166045112 |
166045135 |
2 |
- |
26472758 |
K562 |
viability |
AATCTGAGGACAGCATCAGGAGG |
SCN1A |
ENSG00000144285 |
0.32533872305001454 |
[207] |
[219] |
2 |
hSpCas9 |
negative selection |
716378 |
166045034 |
166045057 |
2 |
+ |
26472758 |
K562 |
viability |
GTGCCATACCTGGTGTGGGGAGG |
SCN1A |
ENSG00000144285 |
1.2097817259944295 |
[273] |
[534] |
8 |
hSpCas9 |
negative selection |
716379 |
166044011 |
166044034 |
2 |
- |
26472758 |
K562 |
viability |
GTGGCTCCCTATTTTCACCAAGG |
SCN1A |
ENSG00000144285 |
0.22017118141976977 |
[779] |
[766] |
1 |
hSpCas9 |
negative selection |
716380 |
166038019 |
166038042 |
2 |
+ |
26472758 |
K562 |
viability |
GACGATGATGGCCAAGACGAGGG |
SCN1A |
ENSG00000144285 |
0.28494653424905714 |
[701] |
[721] |
2 |
hSpCas9 |
negative selection |
716381 |
166037986 |
166038009 |
2 |
+ |
26472758 |
K562 |
viability |
AAAGAGCTGCATGCCGACCACGG |
SCN1A |
ENSG00000144285 |
-0.5107514618773499 |
[318] |
[188] |
-3 |
hSpCas9 |
negative selection |
716385 |
165991303 |
165991326 |
2 |
+ |
26627737 |
DLD1 |
viability |
TTTGTCACCCGGTCATAGGAAGG |
SCN1A |
ENSG00000144285 |
0.7125188171689755 |
[350] |
[136,297,118] |
7 |
hSpCas9 |
negative selection |
809105 |
166036129 |
166036152 |
2 |
+ |
26627737 |
DLD1 |
viability |
TGGTACAGTCACAGTAAGACTGG |
SCN1A |
ENSG00000144285 |
0.7453382956329951 |
[576] |
[224,390,295] |
7 |
hSpCas9 |
negative selection |
809106 |
166038018 |
166038041 |
2 |
+ |
26627737 |
DLD1 |
viability |
AGACGATGATGGCCAAGACGAGG |
SCN1A |
ENSG00000144285 |
0.3783078362533481 |
[1262] |
[425,728,409] |
4 |
hSpCas9 |
negative selection |
809107 |
166051938 |
166051961 |
2 |
+ |
26627737 |
DLD1 |
viability |
CTGAGAGCTTCTTCACAGACTGG |
SCN1A |
ENSG00000144285 |
0.475685355903945 |
[759] |
[255,468,279] |
5 |
hSpCas9 |
negative selection |
809108 |
166052833 |
166052856 |
2 |
+ |
26627737 |
DLD1 |
viability |
TATCTAACCTTGCTCTCACCTGG |
SCN1A |
ENSG00000144285 |
0.36582690528510264 |
[118] |
[50,5,79] |
4 |
hSpCas9 |
negative selection |
809109 |
166073593 |
166073616 |
2 |
- |
26627737 |
DLD1 |
viability |
CAAACAGTGCTTGTACCACCAGG |
SCN1A |
ENSG00000144285 |
0.5305739851785012 |
[441] |
[244,287,86] |
5 |
hSpCas9 |
negative selection |
809110 |
165991303 |
165991326 |
2 |
+ |
26627737 |
GBM cells |
viability after 5 days |
TTTGTCACCCGGTCATAGGAAGG |
SCN1A |
ENSG00000144285 |
0.4760356223896585 |
[245] |
[170,195] |
7 |
hSpCas9 |
negative selection |
891420 |
166036129 |
166036152 |
2 |
+ |
26627737 |
GBM cells |
viability after 5 days |
TGGTACAGTCACAGTAAGACTGG |
SCN1A |
ENSG00000144285 |
0.5911095989318693 |
[431] |
[393,303] |
8 |
hSpCas9 |
negative selection |
891421 |
166038018 |
166038041 |
2 |
+ |
26627737 |
GBM cells |
viability after 5 days |
AGACGATGATGGCCAAGACGAGG |
SCN1A |
ENSG00000144285 |
-0.35900328956263894 |
[787] |
[257,400] |
-5 |
hSpCas9 |
negative selection |
891422 |
166051938 |
166051961 |
2 |
+ |
26627737 |
GBM cells |
viability after 5 days |
CTGAGAGCTTCTTCACAGACTGG |
SCN1A |
ENSG00000144285 |
0.3502932212282499 |
[489] |
[336,332] |
5 |
hSpCas9 |
negative selection |
891423 |
166052833 |
166052856 |
2 |
+ |
26627737 |
GBM cells |
viability after 5 days |
TATCTAACCTTGCTCTCACCTGG |
SCN1A |
ENSG00000144285 |
-0.37238814693170896 |
[69] |
[31,25] |
-5 |
hSpCas9 |
negative selection |
891424 |
166073593 |
166073616 |
2 |
- |
26627737 |
GBM cells |
viability after 5 days |
CAAACAGTGCTTGTACCACCAGG |
SCN1A |
ENSG00000144285 |
0.703518185927255 |
[299] |
[257,265] |
8 |
hSpCas9 |
negative selection |
891425 |
165991303 |
165991326 |
2 |
+ |
26627737 |
GBM cells |
viability after 13 days |
TTTGTCACCCGGTCATAGGAAGG |
SCN1A |
ENSG00000144285 |
0.45250333009671195 |
[245] |
[164,196] |
6 |
hSpCas9 |
negative selection |
973735 |
166036129 |
166036152 |
2 |
+ |
26627737 |
GBM cells |
viability after 13 days |
TGGTACAGTCACAGTAAGACTGG |
SCN1A |
ENSG00000144285 |
0.8969076425304332 |
[431] |
[527,361] |
9 |
hSpCas9 |
negative selection |
973736 |
166038018 |
166038041 |
2 |
+ |
26627737 |
GBM cells |
viability after 13 days |
AGACGATGATGGCCAAGACGAGG |
SCN1A |
ENSG00000144285 |
-0.6165880183474222 |
[787] |
[333,233] |
-6 |
hSpCas9 |
negative selection |
973737 |
166051938 |
166051961 |
2 |
+ |
26627737 |
GBM cells |
viability after 13 days |
CTGAGAGCTTCTTCACAGACTGG |
SCN1A |
ENSG00000144285 |
0.6189301569453838 |
[489] |
[447,375] |
7 |
hSpCas9 |
negative selection |
973738 |
166052833 |
166052856 |
2 |
+ |
26627737 |
GBM cells |
viability after 13 days |
TATCTAACCTTGCTCTCACCTGG |
SCN1A |
ENSG00000144285 |
-0.4978033748681421 |
[69] |
[27,25] |
-5 |
hSpCas9 |
negative selection |
973739 |
166073593 |
166073616 |
2 |
- |
26627737 |
GBM cells |
viability after 13 days |
CAAACAGTGCTTGTACCACCAGG |
SCN1A |
ENSG00000144285 |
0.4884059945458909 |
[299] |
[245,213] |
6 |
hSpCas9 |
negative selection |
973740 |
165991303 |
165991326 |
2 |
+ |
26627737 |
GBM cells |
viability after 21 days |
TTTGTCACCCGGTCATAGGAAGG |
SCN1A |
ENSG00000144285 |
0.602896772325098 |
[245] |
[226,180] |
6 |
hSpCas9 |
negative selection |
1056050 |
166036129 |
166036152 |
2 |
+ |
26627737 |
GBM cells |
viability after 21 days |
TGGTACAGTCACAGTAAGACTGG |
SCN1A |
ENSG00000144285 |
0.7456470943308797 |
[431] |
[392,393] |
7 |
hSpCas9 |
negative selection |
1056051 |
166038018 |
166038041 |
2 |
+ |
26627737 |
GBM cells |
viability after 21 days |
AGACGATGATGGCCAAGACGAGG |
SCN1A |
ENSG00000144285 |
-0.49959712474234874 |
[787] |
[330,276] |
-4 |
hSpCas9 |
negative selection |
1056052 |
166051938 |
166051961 |
2 |
+ |
26627737 |
GBM cells |
viability after 21 days |
CTGAGAGCTTCTTCACAGACTGG |
SCN1A |
ENSG00000144285 |
0.7811882552280811 |
[489] |
[445,467] |
7 |
hSpCas9 |
negative selection |
1056053 |
166052833 |
166052856 |
2 |
+ |
26627737 |
GBM cells |
viability after 21 days |
TATCTAACCTTGCTCTCACCTGG |
SCN1A |
ENSG00000144285 |
0.7743042167497676 |
[69] |
[63,65] |
7 |
hSpCas9 |
negative selection |
1056054 |
166073593 |
166073616 |
2 |
- |
26627737 |
GBM cells |
viability after 21 days |
CAAACAGTGCTTGTACCACCAGG |
SCN1A |
ENSG00000144285 |
0.3386930791856309 |
[299] |
[226,186] |
3 |
hSpCas9 |
negative selection |
1056055 |
165991303 |
165991326 |
2 |
+ |
26627737 |
RPE1 |
viability after 9 days |
TTTGTCACCCGGTCATAGGAAGG |
SCN1A |
ENSG00000144285 |
0.4876697522856564 |
[602] |
[210,333] |
3 |
hSpCas9 |
negative selection |
1138365 |
166036129 |
166036152 |
2 |
+ |
26627737 |
RPE1 |
viability after 9 days |
TGGTACAGTCACAGTAAGACTGG |
SCN1A |
ENSG00000144285 |
0.7556219639869546 |
[1079] |
[407,780] |
5 |
hSpCas9 |
negative selection |
1138366 |
166038018 |
166038041 |
2 |
+ |
26627737 |
RPE1 |
viability after 9 days |
AGACGATGATGGCCAAGACGAGG |
SCN1A |
ENSG00000144285 |
0.1592708833542742 |
[2792] |
[679,1358] |
1 |
hSpCas9 |
negative selection |
1138367 |
166051938 |
166051961 |
2 |
+ |
26627737 |
RPE1 |
viability after 9 days |
CTGAGAGCTTCTTCACAGACTGG |
SCN1A |
ENSG00000144285 |
0.9391655907921304 |
[1987] |
[1095,1318] |
6 |
hSpCas9 |
negative selection |
1138368 |
166052833 |
166052856 |
2 |
+ |
26627737 |
RPE1 |
viability after 9 days |
TATCTAACCTTGCTCTCACCTGG |
SCN1A |
ENSG00000144285 |
-1.0481359903447167 |
[334] |
[34,70] |
-6 |
hSpCas9 |
negative selection |
1138369 |
166073593 |
166073616 |
2 |
- |
26627737 |
RPE1 |
viability after 9 days |
CAAACAGTGCTTGTACCACCAGG |
SCN1A |
ENSG00000144285 |
0.0659181219116769 |
[950] |
[322,296] |
0 |
hSpCas9 |
negative selection |
1138370 |
165991303 |
165991326 |
2 |
+ |
26627737 |
RPE1 |
viability after 12 days |
TTTGTCACCCGGTCATAGGAAGG |
SCN1A |
ENSG00000144285 |
0.4960573753849781 |
[602] |
[193,264] |
3 |
hSpCas9 |
negative selection |
1220680 |
166036129 |
166036152 |
2 |
+ |
26627737 |
RPE1 |
viability after 12 days |
TGGTACAGTCACAGTAAGACTGG |
SCN1A |
ENSG00000144285 |
0.7357724590600234 |
[1079] |
[387,583] |
5 |
hSpCas9 |
negative selection |
1220681 |
166038018 |
166038041 |
2 |
+ |
26627737 |
RPE1 |
viability after 12 days |
AGACGATGATGGCCAAGACGAGG |
SCN1A |
ENSG00000144285 |
-0.025743937849955323 |
[2792] |
[655,822] |
0 |
hSpCas9 |
negative selection |
1220682 |
166051938 |
166051961 |
2 |
+ |
26627737 |
RPE1 |
viability after 12 days |
CTGAGAGCTTCTTCACAGACTGG |
SCN1A |
ENSG00000144285 |
0.6119397689896193 |
[1987] |
[825,805] |
4 |
hSpCas9 |
negative selection |
1220683 |
166052833 |
166052856 |
2 |
+ |
26627737 |
RPE1 |
viability after 12 days |
TATCTAACCTTGCTCTCACCTGG |
SCN1A |
ENSG00000144285 |
-0.8713194632201198 |
[334] |
[21,77] |
-5 |
hSpCas9 |
negative selection |
1220684 |
166073593 |
166073616 |
2 |
- |
26627737 |
RPE1 |
viability after 12 days |
CAAACAGTGCTTGTACCACCAGG |
SCN1A |
ENSG00000144285 |
0.00971696818705231 |
[950] |
[213,302] |
0 |
hSpCas9 |
negative selection |
1220685 |
165991303 |
165991326 |
2 |
+ |
26627737 |
RPE1 |
viability after 15 days |
TTTGTCACCCGGTCATAGGAAGG |
SCN1A |
ENSG00000144285 |
0.7058141886627347 |
[602] |
[293,262] |
4 |
hSpCas9 |
negative selection |
1302995 |
166036129 |
166036152 |
2 |
+ |
26627737 |
RPE1 |
viability after 15 days |
TGGTACAGTCACAGTAAGACTGG |
SCN1A |
ENSG00000144285 |
1.2269426858387091 |
[1079] |
[877,557] |
7 |
hSpCas9 |
negative selection |
1302996 |
166038018 |
166038041 |
2 |
+ |
26627737 |
RPE1 |
viability after 15 days |
AGACGATGATGGCCAAGACGAGG |
SCN1A |
ENSG00000144285 |
-0.12577519187044905 |
[2792] |
[576,865] |
-1 |
hSpCas9 |
negative selection |
1302997 |
166051938 |
166051961 |
2 |
+ |
26627737 |
RPE1 |
viability after 15 days |
CTGAGAGCTTCTTCACAGACTGG |
SCN1A |
ENSG00000144285 |
0.7764793780826795 |
[1987] |
[1002,924] |
5 |
hSpCas9 |
negative selection |
1302998 |
166052833 |
166052856 |
2 |
+ |
26627737 |
RPE1 |
viability after 15 days |
TATCTAACCTTGCTCTCACCTGG |
SCN1A |
ENSG00000144285 |
-1.2931373691835604 |
[334] |
[0,74] |
-7 |
hSpCas9 |
negative selection |
1302999 |
166073593 |
166073616 |
2 |
- |
26627737 |
RPE1 |
viability after 15 days |
CAAACAGTGCTTGTACCACCAGG |
SCN1A |
ENSG00000144285 |
0.14496278168248733 |
[950] |
[271,321] |
1 |
hSpCas9 |
negative selection |
1303000 |
165991303 |
165991326 |
2 |
+ |
26627737 |
RPE1 |
viability after 18 days |
TTTGTCACCCGGTCATAGGAAGG |
SCN1A |
ENSG00000144285 |
0.45467660716393393 |
[602] |
[208,237] |
3 |
hSpCas9 |
negative selection |
1385310 |
166036129 |
166036152 |
2 |
+ |
26627737 |
RPE1 |
viability after 18 days |
TGGTACAGTCACAGTAAGACTGG |
SCN1A |
ENSG00000144285 |
0.7641097518240734 |
[1079] |
[450,541] |
5 |
hSpCas9 |
negative selection |
1385311 |
166038018 |
166038041 |
2 |
+ |
26627737 |
RPE1 |
viability after 18 days |
AGACGATGATGGCCAAGACGAGG |
SCN1A |
ENSG00000144285 |
0.09154594821749473 |
[2792] |
[558,1063] |
0 |
hSpCas9 |
negative selection |
1385312 |
166051938 |
166051961 |
2 |
+ |
26627737 |
RPE1 |
viability after 18 days |
CTGAGAGCTTCTTCACAGACTGG |
SCN1A |
ENSG00000144285 |
0.5924522348137076 |
[1987] |
[675,950] |
4 |
hSpCas9 |
negative selection |
1385313 |
166052833 |
166052856 |
2 |
+ |
26627737 |
RPE1 |
viability after 18 days |
TATCTAACCTTGCTCTCACCTGG |
SCN1A |
ENSG00000144285 |
-2.043275064844088 |
[334] |
[19,23] |
-8 |
hSpCas9 |
negative selection |
1385314 |
166073593 |
166073616 |
2 |
- |
26627737 |
RPE1 |
viability after 18 days |
CAAACAGTGCTTGTACCACCAGG |
SCN1A |
ENSG00000144285 |
0.35462731648558354 |
[950] |
[259,400] |
2 |
hSpCas9 |
negative selection |
1385315 |
165991303 |
165991326 |
2 |
+ |
26627737 |
HeLa |
viability after 8 days |
TTTGTCACCCGGTCATAGGAAGG |
SCN1A |
ENSG00000144285 |
0.07226723902549011 |
[372] |
[261,172,101] |
0 |
hSpCas9 |
negative selection |
1467625 |
166036129 |
166036152 |
2 |
+ |
26627737 |
HeLa |
viability after 8 days |
TGGTACAGTCACAGTAAGACTGG |
SCN1A |
ENSG00000144285 |
-0.4448117429234246 |
[898] |
[404,164,315] |
-4 |
hSpCas9 |
negative selection |
1467626 |
166038018 |
166038041 |
2 |
+ |
26627737 |
HeLa |
viability after 8 days |
AGACGATGATGGCCAAGACGAGG |
SCN1A |
ENSG00000144285 |
-0.019454838902905447 |
[1262] |
[850,499,356] |
0 |
hSpCas9 |
negative selection |
1467627 |
166051938 |
166051961 |
2 |
+ |
26627737 |
HeLa |
viability after 8 days |
CTGAGAGCTTCTTCACAGACTGG |
SCN1A |
ENSG00000144285 |
0.8763702547947193 |
[683] |
[851,316,537] |
7 |
hSpCas9 |
negative selection |
1467628 |
166052833 |
166052856 |
2 |
+ |
26627737 |
HeLa |
viability after 8 days |
TATCTAACCTTGCTCTCACCTGG |
SCN1A |
ENSG00000144285 |
2.858954125397849 |
[31] |
[49,172,70] |
9 |
hSpCas9 |
negative selection |
1467629 |
166073593 |
166073616 |
2 |
- |
26627737 |
HeLa |
viability after 8 days |
CAAACAGTGCTTGTACCACCAGG |
SCN1A |
ENSG00000144285 |
1.721187774357774 |
[151] |
[448,155,107] |
9 |
hSpCas9 |
negative selection |
1467630 |
165991303 |
165991326 |
2 |
+ |
26627737 |
HeLa |
viability after 12 days |
TTTGTCACCCGGTCATAGGAAGG |
SCN1A |
ENSG00000144285 |
0.2606077971573866 |
[372] |
[245,125,189] |
2 |
hSpCas9 |
negative selection |
1549940 |
166036129 |
166036152 |
2 |
+ |
26627737 |
HeLa |
viability after 12 days |
TGGTACAGTCACAGTAAGACTGG |
SCN1A |
ENSG00000144285 |
-0.728964738734132 |
[898] |
[197,126,356] |
-6 |
hSpCas9 |
negative selection |
1549941 |
166038018 |
166038041 |
2 |
+ |
26627737 |
HeLa |
viability after 12 days |
AGACGATGATGGCCAAGACGAGG |
SCN1A |
ENSG00000144285 |
-0.2816874377421579 |
[1262] |
[379,416,490] |
-2 |
hSpCas9 |
negative selection |
1549942 |
166051938 |
166051961 |
2 |
+ |
26627737 |
HeLa |
viability after 12 days |
CTGAGAGCTTCTTCACAGACTGG |
SCN1A |
ENSG00000144285 |
0.9591269016575742 |
[683] |
[689,348,634] |
7 |
hSpCas9 |
negative selection |
1549943 |
166052833 |
166052856 |
2 |
+ |
26627737 |
HeLa |
viability after 12 days |
TATCTAACCTTGCTCTCACCTGG |
SCN1A |
ENSG00000144285 |
2.0656403787196025 |
[31] |
[58,75,28] |
9 |
hSpCas9 |
negative selection |
1549944 |
166073593 |
166073616 |
2 |
- |
26627737 |
HeLa |
viability after 12 days |
CAAACAGTGCTTGTACCACCAGG |
SCN1A |
ENSG00000144285 |
2.2870584237779457 |
[151] |
[579,180,179] |
9 |
hSpCas9 |
negative selection |
1549945 |
165991303 |
165991326 |
2 |
+ |
26627737 |
HeLa |
viability after 15 days |
TTTGTCACCCGGTCATAGGAAGG |
SCN1A |
ENSG00000144285 |
0.08480029426319201 |
[372] |
[177,178,122] |
0 |
hSpCas9 |
negative selection |
1632255 |
166036129 |
166036152 |
2 |
+ |
26627737 |
HeLa |
viability after 15 days |
TGGTACAGTCACAGTAAGACTGG |
SCN1A |
ENSG00000144285 |
0.03354223962201752 |
[898] |
[305,427,391] |
0 |
hSpCas9 |
negative selection |
1632256 |
166038018 |
166038041 |
2 |
+ |
26627737 |
HeLa |
viability after 15 days |
AGACGATGATGGCCAAGACGAGG |
SCN1A |
ENSG00000144285 |
0.18571505139810718 |
[1262] |
[757,616,359] |
1 |
hSpCas9 |
negative selection |
1632257 |
166051938 |
166051961 |
2 |
+ |
26627737 |
HeLa |
viability after 15 days |
CTGAGAGCTTCTTCACAGACTGG |
SCN1A |
ENSG00000144285 |
1.0438192748111117 |
[683] |
[568,522,634] |
7 |
hSpCas9 |
negative selection |
1632258 |
166052833 |
166052856 |
2 |
+ |
26627737 |
HeLa |
viability after 15 days |
TATCTAACCTTGCTCTCACCTGG |
SCN1A |
ENSG00000144285 |
2.092410481542875 |
[31] |
[42,29,96] |
9 |
hSpCas9 |
negative selection |
1632259 |
166073593 |
166073616 |
2 |
- |
26627737 |
HeLa |
viability after 15 days |
CAAACAGTGCTTGTACCACCAGG |
SCN1A |
ENSG00000144285 |
1.8153501668254273 |
[151] |
[209,218,224] |
9 |
hSpCas9 |
negative selection |
1632260 |
165991303 |
165991326 |
2 |
+ |
26627737 |
HeLa |
viability after 18 days |
TTTGTCACCCGGTCATAGGAAGG |
SCN1A |
ENSG00000144285 |
0.13723461314643426 |
[372] |
[127,151,122] |
1 |
hSpCas9 |
negative selection |
1714570 |
166036129 |
166036152 |
2 |
+ |
26627737 |
HeLa |
viability after 18 days |
TGGTACAGTCACAGTAAGACTGG |
SCN1A |
ENSG00000144285 |
0.04019532017580141 |
[898] |
[200,363,391] |
0 |
hSpCas9 |
negative selection |
1714571 |
166038018 |
166038041 |
2 |
+ |
26627737 |
HeLa |
viability after 18 days |
AGACGATGATGGCCAAGACGAGG |
SCN1A |
ENSG00000144285 |
0.1858330905564214 |
[1262] |
[502,517,359] |
1 |
hSpCas9 |
negative selection |
1714572 |
166051938 |
166051961 |
2 |
+ |
26627737 |
HeLa |
viability after 18 days |
CTGAGAGCTTCTTCACAGACTGG |
SCN1A |
ENSG00000144285 |
1.0663462167685984 |
[683] |
[392,440,634] |
7 |
hSpCas9 |
negative selection |
1714573 |
166052833 |
166052856 |
2 |
+ |
26627737 |
HeLa |
viability after 18 days |
TATCTAACCTTGCTCTCACCTGG |
SCN1A |
ENSG00000144285 |
2.0390464002574378 |
[31] |
[27,20,96] |
9 |
hSpCas9 |
negative selection |
1714574 |
166073593 |
166073616 |
2 |
- |
26627737 |
HeLa |
viability after 18 days |
CAAACAGTGCTTGTACCACCAGG |
SCN1A |
ENSG00000144285 |
1.8597065541409947 |
[151] |
[147,188,224] |
9 |
hSpCas9 |
negative selection |
1714575 |
165991303 |
165991326 |
2 |
+ |
26627737 |
HCT116 |
viability after 6 days |
TTTGTCACCCGGTCATAGGAAGG |
SCN1A |
ENSG00000144285 |
-0.2539700191743328 |
[593] |
[96,67] |
-1 |
hSpCas9 |
negative selection |
1796885 |
166036129 |
166036152 |
2 |
+ |
26627737 |
HCT116 |
viability after 6 days |
TGGTACAGTCACAGTAAGACTGG |
SCN1A |
ENSG00000144285 |
-0.22006014818514819 |
[637] |
[98,78] |
-1 |
hSpCas9 |
negative selection |
1796886 |
166038018 |
166038041 |
2 |
+ |
26627737 |
HCT116 |
viability after 6 days |
AGACGATGATGGCCAAGACGAGG |
SCN1A |
ENSG00000144285 |
0.13428633199927043 |
[1684] |
[418,219] |
0 |
hSpCas9 |
negative selection |
1796887 |
166051938 |
166051961 |
2 |
+ |
26627737 |
HCT116 |
viability after 6 days |
CTGAGAGCTTCTTCACAGACTGG |
SCN1A |
ENSG00000144285 |
0.8975241077987546 |
[1330] |
[441,360] |
5 |
hSpCas9 |
negative selection |
1796888 |
166052833 |
166052856 |
2 |
+ |
26627737 |
HCT116 |
viability after 6 days |
TATCTAACCTTGCTCTCACCTGG |
SCN1A |
ENSG00000144285 |
0.5563820184141293 |
[190] |
[38,46] |
3 |
hSpCas9 |
negative selection |
1796889 |
166073593 |
166073616 |
2 |
- |
26627737 |
HCT116 |
viability after 6 days |
CAAACAGTGCTTGTACCACCAGG |
SCN1A |
ENSG00000144285 |
0.009266720016791713 |
[566] |
[90,88] |
0 |
hSpCas9 |
negative selection |
1796890 |
165991303 |
165991326 |
2 |
+ |
26627737 |
HCT116 |
viability after 8 days |
TTTGTCACCCGGTCATAGGAAGG |
SCN1A |
ENSG00000144285 |
0.5157309807218557 |
[185] |
[192,147,99] |
5 |
hSpCas9 |
negative selection |
1879200 |
166036129 |
166036152 |
2 |
+ |
26627737 |
HCT116 |
viability after 8 days |
TGGTACAGTCACAGTAAGACTGG |
SCN1A |
ENSG00000144285 |
0.04052847773003543 |
[653] |
[308,363,436] |
0 |
hSpCas9 |
negative selection |
1879201 |
166038018 |
166038041 |
2 |
+ |
26627737 |
HCT116 |
viability after 8 days |
AGACGATGATGGCCAAGACGAGG |
SCN1A |
ENSG00000144285 |
-0.5414265563319698 |
[1199] |
[288,531,537] |
-6 |
hSpCas9 |
negative selection |
1879202 |
166051938 |
166051961 |
2 |
+ |
26627737 |
HCT116 |
viability after 8 days |
CTGAGAGCTTCTTCACAGACTGG |
SCN1A |
ENSG00000144285 |
-0.0621359116098239 |
[786] |
[413,407,423] |
0 |
hSpCas9 |
negative selection |
1879203 |
166052833 |
166052856 |
2 |
+ |
26627737 |
HCT116 |
viability after 8 days |
TATCTAACCTTGCTCTCACCTGG |
SCN1A |
ENSG00000144285 |
1.3834809208202181 |
[63] |
[130,76,68] |
9 |
hSpCas9 |
negative selection |
1879204 |
166073593 |
166073616 |
2 |
- |
26627737 |
HCT116 |
viability after 8 days |
CAAACAGTGCTTGTACCACCAGG |
SCN1A |
ENSG00000144285 |
-0.17043485297769717 |
[342] |
[177,239,86] |
-2 |
hSpCas9 |
negative selection |
1879205 |
165991303 |
165991326 |
2 |
+ |
26627737 |
HCT116 |
viability after 9 days |
TTTGTCACCCGGTCATAGGAAGG |
SCN1A |
ENSG00000144285 |
-0.606018058538681 |
[593] |
[230,3] |
-4 |
hSpCas9 |
negative selection |
1961515 |
166036129 |
166036152 |
2 |
+ |
26627737 |
HCT116 |
viability after 9 days |
TGGTACAGTCACAGTAAGACTGG |
SCN1A |
ENSG00000144285 |
0.6495382245026868 |
[637] |
[264,268] |
5 |
hSpCas9 |
negative selection |
1961516 |
166038018 |
166038041 |
2 |
+ |
26627737 |
HCT116 |
viability after 9 days |
AGACGATGATGGCCAAGACGAGG |
SCN1A |
ENSG00000144285 |
-0.3542591496916774 |
[1684] |
[585,166] |
-2 |
hSpCas9 |
negative selection |
1961517 |
166051938 |
166051961 |
2 |
+ |
26627737 |
HCT116 |
viability after 9 days |
CTGAGAGCTTCTTCACAGACTGG |
SCN1A |
ENSG00000144285 |
0.7801698256953056 |
[1330] |
[649,578] |
5 |
hSpCas9 |
negative selection |
1961518 |
166052833 |
166052856 |
2 |
+ |
26627737 |
HCT116 |
viability after 9 days |
TATCTAACCTTGCTCTCACCTGG |
SCN1A |
ENSG00000144285 |
-0.7746753067198473 |
[190] |
[64,1] |
-5 |
hSpCas9 |
negative selection |
1961519 |
166073593 |
166073616 |
2 |
- |
26627737 |
HCT116 |
viability after 9 days |
CAAACAGTGCTTGTACCACCAGG |
SCN1A |
ENSG00000144285 |
0.632641654380045 |
[566] |
[470,47] |
4 |
hSpCas9 |
negative selection |
1961520 |
165991303 |
165991326 |
2 |
+ |
26627737 |
HCT116 |
viability after 12 days |
TTTGTCACCCGGTCATAGGAAGG |
SCN1A |
ENSG00000144285 |
0.7756050080558792 |
[185] |
[161,188,151] |
7 |
hSpCas9 |
negative selection |
2043830 |
166036129 |
166036152 |
2 |
+ |
26627737 |
HCT116 |
viability after 12 days |
TGGTACAGTCACAGTAAGACTGG |
SCN1A |
ENSG00000144285 |
0.0511722044851588 |
[653] |
[287,508,280] |
0 |
hSpCas9 |
negative selection |
2043831 |
166038018 |
166038041 |
2 |
+ |
26627737 |
HCT116 |
viability after 12 days |
AGACGATGATGGCCAAGACGAGG |
SCN1A |
ENSG00000144285 |
-0.29915726130423526 |
[1199] |
[500,569,468] |
-3 |
hSpCas9 |
negative selection |
2043832 |
166051938 |
166051961 |
2 |
+ |
26627737 |
HCT116 |
viability after 12 days |
CTGAGAGCTTCTTCACAGACTGG |
SCN1A |
ENSG00000144285 |
0.06260572065137793 |
[786] |
[337,429,535] |
0 |
hSpCas9 |
negative selection |
2043833 |
166052833 |
166052856 |
2 |
+ |
26627737 |
HCT116 |
viability after 12 days |
TATCTAACCTTGCTCTCACCTGG |
SCN1A |
ENSG00000144285 |
1.1623153374063384 |
[63] |
[20,132,77] |
8 |
hSpCas9 |
negative selection |
2043834 |
166073593 |
166073616 |
2 |
- |
26627737 |
HCT116 |
viability after 12 days |
CAAACAGTGCTTGTACCACCAGG |
SCN1A |
ENSG00000144285 |
-0.10733240833826625 |
[342] |
[212,167,116] |
-1 |
hSpCas9 |
negative selection |
2043835 |
165991303 |
165991326 |
2 |
+ |
26627737 |
HCT116 |
viability after 15 days |
TTTGTCACCCGGTCATAGGAAGG |
SCN1A |
ENSG00000144285 |
1.1905193089764807 |
[185] |
[341,211,189] |
8 |
hSpCas9 |
negative selection |
2126145 |
166036129 |
166036152 |
2 |
+ |
26627737 |
HCT116 |
viability after 15 days |
TGGTACAGTCACAGTAAGACTGG |
SCN1A |
ENSG00000144285 |
0.03396392472426224 |
[653] |
[524,451,195] |
0 |
hSpCas9 |
negative selection |
2126146 |
166038018 |
166038041 |
2 |
+ |
26627737 |
HCT116 |
viability after 15 days |
AGACGATGATGGCCAAGACGAGG |
SCN1A |
ENSG00000144285 |
-0.14357674513757313 |
[1199] |
[507,848,501] |
-1 |
hSpCas9 |
negative selection |
2126147 |
166051938 |
166051961 |
2 |
+ |
26627737 |
HCT116 |
viability after 15 days |
CTGAGAGCTTCTTCACAGACTGG |
SCN1A |
ENSG00000144285 |
0.432190588493935 |
[786] |
[502,661,650] |
4 |
hSpCas9 |
negative selection |
2126148 |
166052833 |
166052856 |
2 |
+ |
26627737 |
HCT116 |
viability after 15 days |
TATCTAACCTTGCTCTCACCTGG |
SCN1A |
ENSG00000144285 |
0.2874095277648727 |
[63] |
[53,62,18] |
3 |
hSpCas9 |
negative selection |
2126149 |
166073593 |
166073616 |
2 |
- |
26627737 |
HCT116 |
viability after 15 days |
CAAACAGTGCTTGTACCACCAGG |
SCN1A |
ENSG00000144285 |
0.03500338038434153 |
[342] |
[179,319,103] |
0 |
hSpCas9 |
negative selection |
2126150 |
165991303 |
165991326 |
2 |
+ |
26627737 |
HCT116 |
viability after 18 days |
TTTGTCACCCGGTCATAGGAAGG |
SCN1A |
ENSG00000144285 |
1.1190056173771925 |
[185] |
[206,206,169] |
8 |
hSpCas9 |
negative selection |
2208460 |
166036129 |
166036152 |
2 |
+ |
26627737 |
HCT116 |
viability after 18 days |
TGGTACAGTCACAGTAAGACTGG |
SCN1A |
ENSG00000144285 |
0.5102582308803143 |
[653] |
[463,615,250] |
4 |
hSpCas9 |
negative selection |
2208461 |
166038018 |
166038041 |
2 |
+ |
26627737 |
HCT116 |
viability after 18 days |
AGACGATGATGGCCAAGACGAGG |
SCN1A |
ENSG00000144285 |
-0.12574290891529616 |
[1199] |
[592,447,560] |
-1 |
hSpCas9 |
negative selection |
2208462 |
166051938 |
166051961 |
2 |
+ |
26627737 |
HCT116 |
viability after 18 days |
CTGAGAGCTTCTTCACAGACTGG |
SCN1A |
ENSG00000144285 |
-0.1258523931753206 |
[786] |
[283,315,452] |
-1 |
hSpCas9 |
negative selection |
2208463 |
166052833 |
166052856 |
2 |
+ |
26627737 |
HCT116 |
viability after 18 days |
TATCTAACCTTGCTCTCACCTGG |
SCN1A |
ENSG00000144285 |
0.9615781679109368 |
[63] |
[57,101,15] |
7 |
hSpCas9 |
negative selection |
2208464 |
166073593 |
166073616 |
2 |
- |
26627737 |
HCT116 |
viability after 18 days |
CAAACAGTGCTTGTACCACCAGG |
SCN1A |
ENSG00000144285 |
-0.0233204805924426 |
[342] |
[202,210,67] |
0 |
hSpCas9 |
negative selection |
2208465 |
166093387 |
166093410 |
2 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
GGAGTGCAGTGGCGTGATCTGGG |
SCN1A |
ENSG00000144285 |
1.5299201678265226 |
[5,69] |
[1,47] |
6 |
dCas9-VP64 |
positive selection |
2386467 |
166073923 |
166073946 |
2 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
GGCCTTAATCAAAGTACATTAGG |
SCN1A |
ENSG00000144285 |
0.23711169238095886 |
[388,266] |
[117,48] |
1 |
dCas9-VP64 |
positive selection |
2404831 |
166073980 |
166074003 |
2 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
TCTGTGACACACCCAGAAGATGG |
SCN1A |
ENSG00000144285 |
0.5993913218233191 |
[334,122] |
[20,133] |
2 |
dCas9-VP64 |
positive selection |
2404832 |
166073895 |
166073918 |
2 |
- |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
TGAACCACTTTTAAAACTCATGG |
SCN1A |
ENSG00000144285 |
0.9413396693616795 |
[125,152] |
[74,40] |
4 |
dCas9-VP64 |
positive selection |
2404833 |
166124355 |
166124378 |
2 |
- |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
GGGGTTTCACTATGTTGGCCCGG |
SCN1A |
ENSG00000144285 |
-1.5948665931662949 |
[72,13] |
[3,0] |
-8 |
dCas9-VP64 |
positive selection |
2426189 |
166117786 |
166117809 |
2 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (puromycin) |
GGAGTTCAGCCTGGCCAACATAG |
SCN1A |
ENSG00000144285 |
6.570119908559863 |
[446,222] |
[12631,903] |
9 |
dCas9-VP64 |
positive selection |
2455654 |
166093387 |
166093410 |
2 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
GGAGTGCAGTGGCGTGATCTGGG |
SCN1A |
ENSG00000144285 |
0.46408056547853904 |
[52,55] |
[23,24] |
3 |
dCas9-VP64 |
positive selection |
2481722 |
166073923 |
166073946 |
2 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
GGCCTTAATCAAAGTACATTAGG |
SCN1A |
ENSG00000144285 |
0.1032328866864336 |
[224,74] |
[77,28] |
0 |
dCas9-VP64 |
positive selection |
2500086 |
166073980 |
166074003 |
2 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
TCTGTGACACACCCAGAAGATGG |
SCN1A |
ENSG00000144285 |
0.7180742902627736 |
[238,107] |
[79,106] |
5 |
dCas9-VP64 |
positive selection |
2500087 |
166073895 |
166073918 |
2 |
- |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
TGAACCACTTTTAAAACTCATGG |
SCN1A |
ENSG00000144285 |
-0.2853885288363536 |
[35,273] |
[19,59] |
-3 |
dCas9-VP64 |
positive selection |
2500088 |
166124355 |
166124378 |
2 |
- |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
GGGGTTTCACTATGTTGGCCCGG |
SCN1A |
ENSG00000144285 |
-1.232765897461272 |
[137,17] |
[14,5] |
-9 |
dCas9-VP64 |
positive selection |
2521444 |
166117786 |
166117809 |
2 |
+ |
25494202 |
A375 |
resistance to PLX-4720 (zeocin) |
GGAGTTCAGCCTGGCCAACATAG |
SCN1A |
ENSG00000144285 |
0.905371279890363 |
[221,293] |
[157,156] |
6 |
dCas9-VP64 |
positive selection |
2550909 |
166047754 |
166047777 |
2 |
- |
27453484 |
HT29 |
resistance to T3SS1-dependent cytotoxicity |
ACTTGCAGCCAATGTCCAGAGGG |
SCN1A |
ENSG00000144285 |
0.10067023276426718 |
[3,3] |
[4,2] |
2 |
hSpCas9 |
positive selection |
3018958 |
166056416 |
166056439 |
2 |
+ |
27453484 |
HT29 |
resistance to T3SS1-dependent cytotoxicity |
CATTCTTTGTCCAATCAGGAGGG |
SCN1A |
ENSG00000144285 |
0.23475397679750754 |
[5,5] |
[5,5] |
5 |
hSpCas9 |
positive selection |
3018959 |
166045202 |
166045225 |
2 |
- |
27453484 |
HT29 |
resistance to T3SS1-dependent cytotoxicity |
CTAAGGAAAGAAGAAATCGGAGG |
SCN1A |
ENSG00000144285 |
0.4063836416648986 |
[4,4] |
[4,6] |
8 |
hSpCas9 |
positive selection |
3018960 |
166043831 |
166043854 |
2 |
- |
27453484 |
HT29 |
resistance to T3SS1-dependent cytotoxicity |
GCAACCTGAGTCAGACCAGTAGG |
SCN1A |
ENSG00000144285 |
0.492161693540127 |
[3,3] |
[2,5] |
8 |
hSpCas9 |
positive selection |
3018961 |
166047754 |
166047777 |
2 |
- |
27453484 |
HT29 |
resistance to T3SS2-dependent cytotoxicity |
ACTTGCAGCCAATGTCCAGAGGG |
SCN1A |
ENSG00000144285 |
0.07992264000354825 |
[3,3] |
[4,1] |
1 |
hSpCas9 |
positive selection |
3086816 |
166056416 |
166056439 |
2 |
+ |
27453484 |
HT29 |
resistance to T3SS2-dependent cytotoxicity |
CATTCTTTGTCCAATCAGGAGGG |
SCN1A |
ENSG00000144285 |
0.2770536059660429 |
[5,5] |
[7,2] |
5 |
hSpCas9 |
positive selection |
3086817 |
166045202 |
166045225 |
2 |
- |
27453484 |
HT29 |
resistance to T3SS2-dependent cytotoxicity |
CTAAGGAAAGAAGAAATCGGAGG |
SCN1A |
ENSG00000144285 |
0.013418725775714901 |
[4,4] |
[5,2] |
0 |
hSpCas9 |
positive selection |
3086818 |
166043831 |
166043854 |
2 |
- |
27453484 |
HT29 |
resistance to T3SS2-dependent cytotoxicity |
GCAACCTGAGTCAGACCAGTAGG |
SCN1A |
ENSG00000144285 |
-0.28337986025436185 |
[3,3] |
[2,0] |
-4 |
hSpCas9 |
positive selection |
3086819 |
166054739 |
166054762 |
|
+ |
24336571 |
A375 |
resistance to PLX after 7 days |
AAAAGTATATATTCCTGTGAAGG |
SCN1A |
ENSG00000144285 |
-0.12268733141548532 |
[16,18] |
[16,15] |
-4 |
hSpCas9 |
positive selection |
3142860 |
166054712 |
166054735 |
|
- |
24336571 |
A375 |
resistance to PLX after 7 days |
CACTTATAAAAATTATTGCAAGG |
SCN1A |
ENSG00000144285 |
0.2273606246657096 |
[2,1] |
[2,2] |
6 |
hSpCas9 |
positive selection |
3142861 |
166051889 |
166051912 |
|
- |
24336571 |
A375 |
resistance to PLX after 7 days |
CTGAGCGTATTTGCTCTAATTGG |
SCN1A |
ENSG00000144285 |
0.08112124949698929 |
[25,28] |
[29,28] |
3 |
hSpCas9 |
positive selection |
3142862 |
166051965 |
166051988 |
|
+ |
24336571 |
A375 |
resistance to PLX after 7 days |
GGGCTCCCACAATGGTTTTCAGG |
SCN1A |
ENSG00000144285 |
-0.018576886867843312 |
[16,16] |
[16,15] |
0 |
hSpCas9 |
positive selection |
3142863 |
166054752 |
166054775 |
|
- |
24336571 |
A375 |
resistance to PLX after 7 days |
GTTTTCAGATACACCTTCACAGG |
SCN1A |
ENSG00000144285 |
-0.18163103340681785 |
[31,31] |
[25,28] |
-6 |
hSpCas9 |
positive selection |
3142864 |
166051971 |
166051994 |
|
- |
24336571 |
A375 |
resistance to PLX after 7 days |
TTCAGGCCTGAAAACCATTGTGG |
SCN1A |
ENSG00000144285 |
-0.14059442609132716 |
[13,13] |
[12,11] |
-4 |
hSpCas9 |
positive selection |
3142866 |
166054739 |
166054762 |
|
+ |
24336571 |
A375 |
resistance to PLX after 14 days |
AAAAGTATATATTCCTGTGAAGG |
SCN1A |
ENSG00000144285 |
-0.708402950274449 |
[21,24] |
[4,6] |
-8 |
hSpCas9 |
positive selection |
3200653 |
166054712 |
166054735 |
|
- |
24336571 |
A375 |
resistance to PLX after 14 days |
CACTTATAAAAATTATTGCAAGG |
SCN1A |
ENSG00000144285 |
0.6323833904507539 |
[1,2] |
[1,1] |
5 |
hSpCas9 |
positive selection |
3200654 |
166051889 |
166051912 |
|
- |
24336571 |
A375 |
resistance to PLX after 14 days |
CTGAGCGTATTTGCTCTAATTGG |
SCN1A |
ENSG00000144285 |
-0.5219515748156908 |
[27,25] |
[8,7] |
-6 |
hSpCas9 |
positive selection |
3200655 |
166051965 |
166051988 |
|
+ |
24336571 |
A375 |
resistance to PLX after 14 days |
GGGCTCCCACAATGGTTTTCAGG |
SCN1A |
ENSG00000144285 |
-0.3600550132860748 |
[29,18] |
[6,9] |
-4 |
hSpCas9 |
positive selection |
3200656 |
166054752 |
166054775 |
|
- |
24336571 |
A375 |
resistance to PLX after 14 days |
GTTTTCAGATACACCTTCACAGG |
SCN1A |
ENSG00000144285 |
0.4296918814715216 |
[30,25] |
[17,17] |
4 |
hSpCas9 |
positive selection |
3200657 |
166051971 |
166051994 |
|
- |
24336571 |
A375 |
resistance to PLX after 14 days |
TTCAGGCCTGAAAACCATTGTGG |
SCN1A |
ENSG00000144285 |
-0.5172058720254258 |
[11,11] |
[3,2] |
-6 |
hSpCas9 |
positive selection |
3200659 |
166054739 |
166054762 |
|
+ |
24336571 |
A375 |
viability after 7 days |
AAAAGTATATATTCCTGTGAAGG |
SCN1A |
ENSG00000144285 |
-0.3549214100875838 |
[24] |
[16,18] |
-5 |
hSpCas9 |
negative selection |
3258446 |
166054712 |
166054735 |
|
- |
24336571 |
A375 |
viability after 7 days |
CACTTATAAAAATTATTGCAAGG |
SCN1A |
ENSG00000144285 |
-0.14185729208511288 |
[2] |
[2,1] |
-2 |
hSpCas9 |
negative selection |
3258447 |
166051889 |
166051912 |
|
- |
24336571 |
A375 |
viability after 7 days |
CTGAGCGTATTTGCTCTAATTGG |
SCN1A |
ENSG00000144285 |
0.523591022279357 |
[19] |
[25,28] |
7 |
hSpCas9 |
negative selection |
3258448 |
166051965 |
166051988 |
|
+ |
24336571 |
A375 |
viability after 7 days |
GGGCTCCCACAATGGTTTTCAGG |
SCN1A |
ENSG00000144285 |
-0.0698768235609924 |
[18] |
[16,16] |
-1 |
hSpCas9 |
negative selection |
3258449 |
166054752 |
166054775 |
|
- |
24336571 |
A375 |
viability after 7 days |
GTTTTCAGATACACCTTCACAGG |
SCN1A |
ENSG00000144285 |
-0.19328470071367487 |
[37] |
[31,31] |
-3 |
hSpCas9 |
negative selection |
3258450 |
166051971 |
166051994 |
|
- |
24336571 |
A375 |
viability after 7 days |
TTCAGGCCTGAAAACCATTGTGG |
SCN1A |
ENSG00000144285 |
0.2717204780007506 |
[11] |
[13,13] |
4 |
hSpCas9 |
negative selection |
3258452 |
166054739 |
166054762 |
|
+ |
24336571 |
A375 |
viability after 14 days |
AAAAGTATATATTCCTGTGAAGG |
SCN1A |
ENSG00000144285 |
0.028678725582924725 |
[24] |
[21,24] |
0 |
hSpCas9 |
negative selection |
3316239 |
166054712 |
166054735 |
|
- |
24336571 |
A375 |
viability after 14 days |
CACTTATAAAAATTATTGCAAGG |
SCN1A |
ENSG00000144285 |
-0.24153777368246976 |
[2] |
[1,2] |
-3 |
hSpCas9 |
negative selection |
3316240 |
166051889 |
166051912 |
|
- |
24336571 |
A375 |
viability after 14 days |
CTGAGCGTATTTGCTCTAATTGG |
SCN1A |
ENSG00000144285 |
0.4823567715087672 |
[19] |
[27,25] |
6 |
hSpCas9 |
negative selection |
3316241 |
166051965 |
166051988 |
|
+ |
24336571 |
A375 |
viability after 14 days |
GGGCTCCCACAATGGTTTTCAGG |
SCN1A |
ENSG00000144285 |
0.4553836847815578 |
[18] |
[29,18] |
6 |
hSpCas9 |
negative selection |
3316242 |
166054752 |
166054775 |
|
- |
24336571 |
A375 |
viability after 14 days |
GTTTTCAGATACACCTTCACAGG |
SCN1A |
ENSG00000144285 |
-0.3331820087826578 |
[37] |
[30,25] |
-4 |
hSpCas9 |
negative selection |
3316243 |
166051971 |
166051994 |
|
- |
24336571 |
A375 |
viability after 14 days |
TTCAGGCCTGAAAACCATTGTGG |
SCN1A |
ENSG00000144285 |
0.13730634397991326 |
[11] |
[11,11] |
1 |
hSpCas9 |
negative selection |
3316245 |
166048932 |
166048955 |
2 |
- |
27383988 |
293T |
resistance to West Nile virus (flavivirus) |
AACAGGATATCATTATTTCCTGG |
SCN1A |
ENSG00000144285 |
-0.9025451253325543 |
[285,285] |
[0,0] |
-6 |
hSpCas9 |
positive selection |
3391418 |
166054653 |
166054676 |
2 |
+ |
27383988 |
293T |
resistance to West Nile virus (flavivirus) |
GTGAAATCGAGCCAGTTCCATGG |
SCN1A |
ENSG00000144285 |
0.2915419267837481 |
[124,124] |
[0,0] |
1 |
hSpCas9 |
positive selection |
3391419 |
166054712 |
166054735 |
2 |
- |
27383988 |
293T |
resistance to West Nile virus (flavivirus) |
CACTTATAAAAATTATTGCAAGG |
SCN1A |
ENSG00000144285 |
0.009398698002249677 |
[151,151] |
[0,0] |
0 |
hSpCas9 |
positive selection |
3391420 |
166047754 |
166047777 |
2 |
- |
26780180 |
HT29 |
viability (Avana library 4 designs) |
ACTTGCAGCCAATGTCCAGAGGG |
SCN1A |
ENSG00000144285 |
1.70537482299641 |
[] |
[] |
6 |
hSpCas9 |
negative selection |
3457385 |
166056415 |
166056438 |
2 |
+ |
26780180 |
HT29 |
viability (Avana library 4 designs) |
CATTCTTTGTCCAATCAGGAGGG |
SCN1A |
ENSG00000144285 |
-0.314386759864368 |
[] |
[] |
-5 |
hSpCas9 |
negative selection |
3457386 |
166045202 |
166045225 |
2 |
- |
26780180 |
HT29 |
viability (Avana library 4 designs) |
CTAAGGAAAGAAGAAATCGGAGG |
SCN1A |
ENSG00000144285 |
0.284587193272526 |
[] |
[] |
1 |
hSpCas9 |
negative selection |
3457387 |
166043831 |
166043854 |
2 |
- |
26780180 |
HT29 |
viability (Avana library 4 designs) |
GCAACCTGAGTCAGACCAGTAGG |
SCN1A |
ENSG00000144285 |
1.91332029292917 |
[] |
[] |
7 |
hSpCas9 |
negative selection |
3457388 |
166047754 |
166047777 |
2 |
- |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
ACTTGCAGCCAATGTCCAGAGGG |
SCN1A |
ENSG00000144285 |
3.50042731208767 |
[] |
[] |
5 |
hSpCas9 |
negative selection |
3556315 |
166056415 |
166056438 |
2 |
+ |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
CATTCTTTGTCCAATCAGGAGGG |
SCN1A |
ENSG00000144285 |
-2.4011865083782302 |
[] |
[] |
-3 |
hSpCas9 |
negative selection |
3556316 |
166043831 |
166043854 |
2 |
- |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
GCAACCTGAGTCAGACCAGTAGG |
SCN1A |
ENSG00000144285 |
2.39211608468727 |
[] |
[] |
3 |
hSpCas9 |
negative selection |
3556317 |
166045202 |
166045225 |
2 |
- |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
CTAAGGAAAGAAGAAATCGGAGG |
SCN1A |
ENSG00000144285 |
-1.44519565297746 |
[] |
[] |
-2 |
hSpCas9 |
negative selection |
3556318 |
166046857 |
166046880 |
2 |
+ |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
ATTCTGTTCCTCGTAGGCCATGG |
SCN1A |
ENSG00000144285 |
2.61751888105386 |
[] |
[] |
4 |
hSpCas9 |
negative selection |
3556319 |
166058611 |
166058634 |
2 |
+ |
26780180 |
A375 |
viability (Avana lentiCRISPRv2) |
GAAGGGAGTTAAAATGTACAGGG |
SCN1A |
ENSG00000144285 |
0.0665251806550429 |
[] |
[] |
0 |
hSpCas9 |
negative selection |
3556320 |
166047754 |
166047777 |
2 |
- |
26780180 |
A375 |
viability (Avana lentiGuide) |
ACTTGCAGCCAATGTCCAGAGGG |
SCN1A |
ENSG00000144285 |
-5.07840681660881 |
[] |
[] |
-8 |
hSpCas9 |
negative selection |
3664974 |
166056415 |
166056438 |
2 |
+ |
26780180 |
A375 |
viability (Avana lentiGuide) |
CATTCTTTGTCCAATCAGGAGGG |
SCN1A |
ENSG00000144285 |
-4.53087192625305 |
[] |
[] |
-7 |
hSpCas9 |
negative selection |
3664975 |
166043831 |
166043854 |
2 |
- |
26780180 |
A375 |
viability (Avana lentiGuide) |
GCAACCTGAGTCAGACCAGTAGG |
SCN1A |
ENSG00000144285 |
-3.05494801377205 |
[] |
[] |
-5 |
hSpCas9 |
negative selection |
3664976 |
166045202 |
166045225 |
2 |
- |
26780180 |
A375 |
viability (Avana lentiGuide) |
CTAAGGAAAGAAGAAATCGGAGG |
SCN1A |
ENSG00000144285 |
-5.75698947522242 |
[] |
[] |
-8 |
hSpCas9 |
negative selection |
3664977 |
166046857 |
166046880 |
2 |
+ |
26780180 |
A375 |
viability (Avana lentiGuide) |
ATTCTGTTCCTCGTAGGCCATGG |
SCN1A |
ENSG00000144285 |
7.18807092368183 |
[] |
[] |
5 |
hSpCas9 |
negative selection |
3664978 |
166058611 |
166058634 |
2 |
+ |
26780180 |
A375 |
viability (Avana lentiGuide) |
GAAGGGAGTTAAAATGTACAGGG |
SCN1A |
ENSG00000144285 |
-1.35644606027502 |
[] |
[] |
-2 |
hSpCas9 |
negative selection |
3664979 |
166047754 |
166047777 |
2 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
ACTTGCAGCCAATGTCCAGAGGG |
SCN1A |
ENSG00000144285 |
0.05368660606100001 |
[4] |
[4,4] |
1 |
hSpCas9 |
positive selection |
3773581 |
166056415 |
166056438 |
2 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
CATTCTTTGTCCAATCAGGAGGG |
SCN1A |
ENSG00000144285 |
-0.2509562075105187 |
[6] |
[5,5] |
-4 |
hSpCas9 |
positive selection |
3773582 |
166043831 |
166043854 |
2 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
GCAACCTGAGTCAGACCAGTAGG |
SCN1A |
ENSG00000144285 |
-0.02937147014542829 |
[3] |
[4,2] |
0 |
hSpCas9 |
positive selection |
3773583 |
166045202 |
166045225 |
2 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
CTAAGGAAAGAAGAAATCGGAGG |
SCN1A |
ENSG00000144285 |
0.07247058083216562 |
[6] |
[6,6] |
1 |
hSpCas9 |
positive selection |
3773584 |
166046857 |
166046880 |
2 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
ATTCTGTTCCTCGTAGGCCATGG |
SCN1A |
ENSG00000144285 |
0.154492299535777 |
[5] |
[6,4] |
4 |
hSpCas9 |
positive selection |
3773585 |
166058611 |
166058634 |
2 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiCRISPRv2) |
GAAGGGAGTTAAAATGTACAGGG |
SCN1A |
ENSG00000144285 |
0.06452511548369078 |
[6] |
[6,6] |
1 |
hSpCas9 |
positive selection |
3773586 |
166047754 |
166047777 |
2 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
ACTTGCAGCCAATGTCCAGAGGG |
SCN1A |
ENSG00000144285 |
0.45453544544415575 |
[5] |
[7,6] |
9 |
hSpCas9 |
positive selection |
3882188 |
166056415 |
166056438 |
2 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
CATTCTTTGTCCAATCAGGAGGG |
SCN1A |
ENSG00000144285 |
0.18764920012826614 |
[6] |
[7,5] |
4 |
hSpCas9 |
positive selection |
3882189 |
166043831 |
166043854 |
2 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
GCAACCTGAGTCAGACCAGTAGG |
SCN1A |
ENSG00000144285 |
0.38284945916503804 |
[4] |
[5,5] |
9 |
hSpCas9 |
positive selection |
3882190 |
166045202 |
166045225 |
2 |
- |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
CTAAGGAAAGAAGAAATCGGAGG |
SCN1A |
ENSG00000144285 |
0.3405935122150003 |
[6] |
[7,6] |
8 |
hSpCas9 |
positive selection |
3882191 |
166046857 |
166046880 |
2 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
ATTCTGTTCCTCGTAGGCCATGG |
SCN1A |
ENSG00000144285 |
0.14474157959571893 |
[5] |
[3,5] |
3 |
hSpCas9 |
positive selection |
3882192 |
166058611 |
166058634 |
2 |
+ |
26780180 |
A375 |
resistance to vemurafenib (Avana lentiGuide) |
GAAGGGAGTTAAAATGTACAGGG |
SCN1A |
ENSG00000144285 |
-0.3005757382447567 |
[4] |
[3,1] |
-4 |
hSpCas9 |
positive selection |
3882193 |
166048932 |
166048955 |
2 |
- |
26780180 |
A375 |
viability |
AACAGGATATCATTATTTCCTGG |
SCN1A |
ENSG00000144285 |
0.777588115429239 |
[] |
[] |
3 |
hSpCas9 |
negative selection |
3992214 |
166054712 |
166054735 |
2 |
- |
26780180 |
A375 |
viability |
CACTTATAAAAATTATTGCAAGG |
SCN1A |
ENSG00000144285 |
1.19643660305488 |
[] |
[] |
6 |
hSpCas9 |
negative selection |
3992215 |
166051889 |
166051912 |
2 |
- |
26780180 |
A375 |
viability |
CTGAGCGTATTTGCTCTAATTGG |
SCN1A |
ENSG00000144285 |
0.145645878976828 |
[] |
[] |
0 |
hSpCas9 |
negative selection |
3992216 |
166054653 |
166054676 |
2 |
+ |
26780180 |
A375 |
viability |
GTGAAATCGAGCCAGTTCCATGG |
SCN1A |
ENSG00000144285 |
0.84149109906558 |
[] |
[] |
3 |
hSpCas9 |
negative selection |
3992217 |
166048914 |
166048937 |
2 |
+ |
26780180 |
A375 |
viability |
GTGCATCTAAAAAACCCTCCAGG |
SCN1A |
ENSG00000144285 |
0.340206534138015 |
[] |
[] |
0 |
hSpCas9 |
negative selection |
3992218 |
166051971 |
166051994 |
2 |
- |
26780180 |
A375 |
viability |
TTCAGGCCTGAAAACCATTGTGG |
SCN1A |
ENSG00000144285 |
0.858365824759695 |
[] |
[] |
3 |
hSpCas9 |
negative selection |
3992219 |
166048932 |
166048955 |
2 |
- |
26780180 |
HT29 |
viability (GeCKOv2 library) |
AACAGGATATCATTATTTCCTGG |
SCN1A |
ENSG00000144285 |
1.71196577130049 |
[] |
[] |
8 |
hSpCas9 |
negative selection |
4100180 |
166054712 |
166054735 |
2 |
- |
26780180 |
HT29 |
viability (GeCKOv2 library) |
CACTTATAAAAATTATTGCAAGG |
SCN1A |
ENSG00000144285 |
1.08073670674911 |
[] |
[] |
5 |
hSpCas9 |
negative selection |
4100181 |
166051889 |
166051912 |
2 |
- |
26780180 |
HT29 |
viability (GeCKOv2 library) |
CTGAGCGTATTTGCTCTAATTGG |
SCN1A |
ENSG00000144285 |
0.638988660455504 |
[] |
[] |
2 |
hSpCas9 |
negative selection |
4100182 |
166054653 |
166054676 |
2 |
+ |
26780180 |
HT29 |
viability (GeCKOv2 library) |
GTGAAATCGAGCCAGTTCCATGG |
SCN1A |
ENSG00000144285 |
1.2878536110601 |
[] |
[] |
6 |
hSpCas9 |
negative selection |
4100183 |
166048914 |
166048937 |
2 |
+ |
26780180 |
HT29 |
viability (GeCKOv2 library) |
GTGCATCTAAAAAACCCTCCAGG |
SCN1A |
ENSG00000144285 |
0.413851565835474 |
[] |
[] |
1 |
hSpCas9 |
negative selection |
4100184 |
166051971 |
166051994 |
2 |
- |
26780180 |
HT29 |
viability (GeCKOv2 library) |
TTCAGGCCTGAAAACCATTGTGG |
SCN1A |
ENSG00000144285 |
0.563213569169658 |
[] |
[] |
2 |
hSpCas9 |
negative selection |
4100185 |
166054739 |
166054762 |
2 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiCRISPRv1) |
AAAAGTATATATTCCTGTGAAGG |
SCN1A |
ENSG00000144285 |
0.04758524165846614 |
[4] |
[3,2] |
1 |
hSpCas9 |
positive selection |
4168647 |
166054712 |
166054735 |
2 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiCRISPRv1) |
CACTTATAAAAATTATTGCAAGG |
SCN1A |
ENSG00000144285 |
0.6983142528968276 |
[0] |
[0,0] |
9 |
hSpCas9 |
positive selection |
4168648 |
166051889 |
166051912 |
2 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiCRISPRv1) |
CTGAGCGTATTTGCTCTAATTGG |
SCN1A |
ENSG00000144285 |
0.007127236686689797 |
[4] |
[3,2] |
0 |
hSpCas9 |
positive selection |
4168649 |
166051965 |
166051988 |
2 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiCRISPRv1) |
GGGCTCCCACAATGGTTTTCAGG |
SCN1A |
ENSG00000144285 |
0.3220257743873797 |
[4] |
[3,2] |
7 |
hSpCas9 |
positive selection |
4168650 |
166054752 |
166054775 |
2 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiCRISPRv1) |
GTTTTCAGATACACCTTCACAGG |
SCN1A |
ENSG00000144285 |
0.2478957432927682 |
[4] |
[3,4] |
6 |
hSpCas9 |
positive selection |
4168651 |
166051971 |
166051994 |
2 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiCRISPRv1) |
TTCAGGCCTGAAAACCATTGTGG |
SCN1A |
ENSG00000144285 |
0.05923267800659256 |
[3] |
[2,1] |
1 |
hSpCas9 |
positive selection |
4168653 |
166054739 |
166054762 |
2 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiGuide) |
AAAAGTATATATTCCTGTGAAGG |
SCN1A |
ENSG00000144285 |
1.1292829245263052 |
[4] |
[3,3,4,4] |
8 |
hSpCas9 |
positive selection |
4232669 |
166054712 |
166054735 |
2 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiGuide) |
CACTTATAAAAATTATTGCAAGG |
SCN1A |
ENSG00000144285 |
-0.13099724777042815 |
[2] |
[0,0,1,0] |
-2 |
hSpCas9 |
positive selection |
4232670 |
166051889 |
166051912 |
2 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiGuide) |
CTGAGCGTATTTGCTCTAATTGG |
SCN1A |
ENSG00000144285 |
1.2062972373735574 |
[4] |
[3,3,5,4] |
8 |
hSpCas9 |
positive selection |
4232671 |
166051965 |
166051988 |
2 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiGuide) |
GGGCTCCCACAATGGTTTTCAGG |
SCN1A |
ENSG00000144285 |
1.2212463771387818 |
[3] |
[4,2,4,3] |
8 |
hSpCas9 |
positive selection |
4232672 |
166054752 |
166054775 |
2 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiGuide) |
GTTTTCAGATACACCTTCACAGG |
SCN1A |
ENSG00000144285 |
0.8402725103118238 |
[4] |
[2,4,2,3] |
5 |
hSpCas9 |
positive selection |
4232673 |
166051971 |
166051994 |
2 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv1 lentiGuide) |
TTCAGGCCTGAAAACCATTGTGG |
SCN1A |
ENSG00000144285 |
0.8554890284903768 |
[3] |
[2,0,2,3] |
5 |
hSpCas9 |
positive selection |
4232675 |
166048914 |
166048937 |
2 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
GTGCATCTAAAAAACCCTCCAGG |
SCN1A |
ENSG00000144285 |
-0.15724415469660302 |
[0] |
[0,0] |
-3 |
hSpCas9 |
positive selection |
4296604 |
166051889 |
166051912 |
2 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
CTGAGCGTATTTGCTCTAATTGG |
SCN1A |
ENSG00000144285 |
0.1609549787482048 |
[2] |
[2,1] |
3 |
hSpCas9 |
positive selection |
4296605 |
166051971 |
166051994 |
2 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
TTCAGGCCTGAAAACCATTGTGG |
SCN1A |
ENSG00000144285 |
0.47583372881044506 |
[3] |
[3,2] |
8 |
hSpCas9 |
positive selection |
4296606 |
166048932 |
166048955 |
2 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
AACAGGATATCATTATTTCCTGG |
SCN1A |
ENSG00000144285 |
0.13445515964112945 |
[3] |
[3,2] |
2 |
hSpCas9 |
positive selection |
4360858 |
166054653 |
166054676 |
2 |
+ |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
GTGAAATCGAGCCAGTTCCATGG |
SCN1A |
ENSG00000144285 |
-0.2928456341514495 |
[2] |
[1,0] |
-6 |
hSpCas9 |
positive selection |
4360859 |
166054712 |
166054735 |
2 |
- |
26780180 |
A375 |
resistance to vemurafenib (GeCKOv2 lentiGuide) |
CACTTATAAAAATTATTGCAAGG |
SCN1A |
ENSG00000144285 |
0.12807150543244156 |
[2] |
[3,1] |
2 |
hSpCas9 |
positive selection |
4360860 |
166039451 |
166039473 |
2 |
- |
27760321 |
OCIAML3 |
viability |
TTGGACTCGCCAATGTGGAAGG |
SCN1A |
ENSG00000144285 |
0.759304591729624 |
[399,360] |
[494,513] |
8 |
hSpCas9 |
negative selection |
4437180 |
166039479 |
166039501 |
2 |
- |
27760321 |
OCIAML3 |
viability |
TTTATTGTGACGCTTAGCCTGG |
SCN1A |
ENSG00000144285 |
-0.20552415561812548 |
[312,315] |
[161,281] |
-2 |
hSpCas9 |
negative selection |
4437181 |
166042356 |
166042378 |
2 |
+ |
27760321 |
OCIAML3 |
viability |
TAGAAAGTCCATGGAAACGTGG |
SCN1A |
ENSG00000144285 |
0.48003170872745826 |
[202,181] |
[151,284] |
6 |
hSpCas9 |
negative selection |
4437182 |
166043796 |
166043818 |
2 |
- |
27760321 |
OCIAML3 |
viability |
TGGCAGTGTTTCCAGCGAATGG |
SCN1A |
ENSG00000144285 |
0.19220387150266005 |
[577,472] |
[402,550] |
2 |
hSpCas9 |
negative selection |
4437183 |
166047653 |
166047675 |
2 |
- |
27760321 |
OCIAML3 |
viability |
TTGTTTCGACTAATGACTCAGG |
SCN1A |
ENSG00000144285 |
-0.5041079275680043 |
[240,195] |
[118,120] |
-5 |
hSpCas9 |
negative selection |
4437184 |
166039451 |
166039473 |
2 |
- |
27760321 |
OCIAML2 |
viability |
TTGGACTCGCCAATGTGGAAGG |
SCN1A |
ENSG00000144285 |
0.4412311998695333 |
[399,360] |
[316,549] |
6 |
hSpCas9 |
negative selection |
4520643 |
166039479 |
166039501 |
2 |
- |
27760321 |
OCIAML2 |
viability |
TTTATTGTGACGCTTAGCCTGG |
SCN1A |
ENSG00000144285 |
-0.210050988037278 |
[312,315] |
[193,255] |
-3 |
hSpCas9 |
negative selection |
4520644 |
166042356 |
166042378 |
2 |
+ |
27760321 |
OCIAML2 |
viability |
TAGAAAGTCCATGGAAACGTGG |
SCN1A |
ENSG00000144285 |
-0.7770311249092179 |
[202,181] |
[82,100] |
-7 |
hSpCas9 |
negative selection |
4520645 |
166043796 |
166043818 |
2 |
- |
27760321 |
OCIAML2 |
viability |
TGGCAGTGTTTCCAGCGAATGG |
SCN1A |
ENSG00000144285 |
0.5092770243424323 |
[577,472] |
[545,675] |
7 |
hSpCas9 |
negative selection |
4520646 |
166047653 |
166047675 |
2 |
- |
27760321 |
OCIAML2 |
viability |
TTGTTTCGACTAATGACTCAGG |
SCN1A |
ENSG00000144285 |
0.18916566915361377 |
[240,195] |
[171,237] |
2 |
hSpCas9 |
negative selection |
4520647 |
166039451 |
166039473 |
2 |
- |
27760321 |
MV411 |
viability |
TTGGACTCGCCAATGTGGAAGG |
SCN1A |
ENSG00000144285 |
0.4172180135776243 |
[399,360] |
[318,358] |
3 |
hSpCas9 |
negative selection |
4604106 |
166039479 |
166039501 |
2 |
- |
27760321 |
MV411 |
viability |
TTTATTGTGACGCTTAGCCTGG |
SCN1A |
ENSG00000144285 |
0.197945763909448 |
[312,315] |
[160,355] |
1 |
hSpCas9 |
negative selection |
4604107 |
166042356 |
166042378 |
2 |
+ |
27760321 |
MV411 |
viability |
TAGAAAGTCCATGGAAACGTGG |
SCN1A |
ENSG00000144285 |
-0.14257236015513852 |
[202,181] |
[42,222] |
-1 |
hSpCas9 |
negative selection |
4604108 |
166043796 |
166043818 |
2 |
- |
27760321 |
MV411 |
viability |
TGGCAGTGTTTCCAGCGAATGG |
SCN1A |
ENSG00000144285 |
1.6811330845579784 |
[577,472] |
[1562,420] |
9 |
hSpCas9 |
negative selection |
4604109 |
166047653 |
166047675 |
2 |
- |
27760321 |
MV411 |
viability |
TTGTTTCGACTAATGACTCAGG |
SCN1A |
ENSG00000144285 |
0.20395843035862626 |
[240,195] |
[195,118] |
1 |
hSpCas9 |
negative selection |
4604110 |
166039451 |
166039473 |
2 |
- |
27760321 |
HL60 |
viability |
TTGGACTCGCCAATGTGGAAGG |
SCN1A |
ENSG00000144285 |
0.6383914346632633 |
[399,360] |
[412,557] |
7 |
hSpCas9 |
negative selection |
4687569 |
166039479 |
166039501 |
2 |
- |
27760321 |
HL60 |
viability |
TTTATTGTGACGCTTAGCCTGG |
SCN1A |
ENSG00000144285 |
-0.4077523411194363 |
[312,315] |
[189,198] |
-4 |
hSpCas9 |
negative selection |
4687570 |
166042356 |
166042378 |
2 |
+ |
27760321 |
HL60 |
viability |
TAGAAAGTCCATGGAAACGTGG |
SCN1A |
ENSG00000144285 |
-0.09551106795171393 |
[202,181] |
[146,146] |
-1 |
hSpCas9 |
negative selection |
4687571 |
166043796 |
166043818 |
2 |
- |
27760321 |
HL60 |
viability |
TGGCAGTGTTTCCAGCGAATGG |
SCN1A |
ENSG00000144285 |
0.21891170196766374 |
[577,472] |
[468,526] |
2 |
hSpCas9 |
negative selection |
4687572 |
166047653 |
166047675 |
2 |
- |
27760321 |
HL60 |
viability |
TTGTTTCGACTAATGACTCAGG |
SCN1A |
ENSG00000144285 |
-0.7797970359131612 |
[240,195] |
[133,70] |
-7 |
hSpCas9 |
negative selection |
4687573 |
166039451 |
166039473 |
2 |
- |
27760321 |
HT1080 |
viability |
TTGGACTCGCCAATGTGGAAGG |
SCN1A |
ENSG00000144285 |
0.08892544605937992 |
[360,281] |
[140,130] |
0 |
hSpCas9 |
negative selection |
4771032 |
166039479 |
166039501 |
2 |
- |
27760321 |
HT1080 |
viability |
TTTATTGTGACGCTTAGCCTGG |
SCN1A |
ENSG00000144285 |
-0.8083669832273577 |
[315,246] |
[85,39] |
-3 |
hSpCas9 |
negative selection |
4771033 |
166042356 |
166042378 |
2 |
+ |
27760321 |
HT1080 |
viability |
TAGAAAGTCCATGGAAACGTGG |
SCN1A |
ENSG00000144285 |
0.11907213559724505 |
[181,141] |
[92,44] |
0 |
hSpCas9 |
negative selection |
4771034 |
166043796 |
166043818 |
2 |
- |
27760321 |
HT1080 |
viability |
TGGCAGTGTTTCCAGCGAATGG |
SCN1A |
ENSG00000144285 |
0.457241964894332 |
[472,368] |
[224,235] |
2 |
hSpCas9 |
negative selection |
4771035 |
166047653 |
166047675 |
2 |
- |
27760321 |
HT1080 |
viability |
TTGTTTCGACTAATGACTCAGG |
SCN1A |
ENSG00000144285 |
2.1105237737037945 |
[195,152] |
[430,156] |
9 |
hSpCas9 |
negative selection |
4771036 |
166039451 |
166039473 |
2 |
- |
27760321 |
HT29 |
viability after 7 days |
TTGGACTCGCCAATGTGGAAGG |
SCN1A |
ENSG00000144285 |
-0.03144379712408815 |
[360,281] |
[392,407,409] |
0 |
hSpCas9 |
negative selection |
4854495 |
166039479 |
166039501 |
2 |
- |
27760321 |
HT29 |
viability after 7 days |
TTTATTGTGACGCTTAGCCTGG |
SCN1A |
ENSG00000144285 |
-0.6642499937238926 |
[315,246] |
[319,214,164] |
-7 |
hSpCas9 |
negative selection |
4854496 |
166042356 |
166042378 |
2 |
+ |
27760321 |
HT29 |
viability after 7 days |
TAGAAAGTCCATGGAAACGTGG |
SCN1A |
ENSG00000144285 |
-0.001241416899501191 |
[181,141] |
[401,147,104] |
0 |
hSpCas9 |
negative selection |
4854497 |
166043796 |
166043818 |
2 |
- |
27760321 |
HT29 |
viability after 7 days |
TGGCAGTGTTTCCAGCGAATGG |
SCN1A |
ENSG00000144285 |
0.2243736264225556 |
[472,368] |
[734,518,655] |
3 |
hSpCas9 |
negative selection |
4854498 |
166047653 |
166047675 |
2 |
- |
27760321 |
HT29 |
viability after 7 days |
TTGTTTCGACTAATGACTCAGG |
SCN1A |
ENSG00000144285 |
0.06435464153304593 |
[195,152] |
[301,142,266] |
1 |
hSpCas9 |
negative selection |
4854499 |
166039451 |
166039473 |
2 |
- |
27760321 |
HT29 |
viability after 25 days |
TTGGACTCGCCAATGTGGAAGG |
SCN1A |
ENSG00000144285 |
0.2239047087576239 |
[360,281] |
[314,686,275] |
2 |
hSpCas9 |
negative selection |
4937958 |
166039479 |
166039501 |
2 |
- |
27760321 |
HT29 |
viability after 25 days |
TTTATTGTGACGCTTAGCCTGG |
SCN1A |
ENSG00000144285 |
-0.5837326422083837 |
[315,246] |
[258,174,205] |
-5 |
hSpCas9 |
negative selection |
4937959 |
166042356 |
166042378 |
2 |
+ |
27760321 |
HT29 |
viability after 25 days |
TAGAAAGTCCATGGAAACGTGG |
SCN1A |
ENSG00000144285 |
0.45115759415794343 |
[181,141] |
[229,90,460] |
5 |
hSpCas9 |
negative selection |
4937960 |
166043796 |
166043818 |
2 |
- |
27760321 |
HT29 |
viability after 25 days |
TGGCAGTGTTTCCAGCGAATGG |
SCN1A |
ENSG00000144285 |
0.41045124154452295 |
[472,368] |
[558,658,711] |
4 |
hSpCas9 |
negative selection |
4937961 |
166047653 |
166047675 |
2 |
- |
27760321 |
HT29 |
viability after 25 days |
TTGTTTCGACTAATGACTCAGG |
SCN1A |
ENSG00000144285 |
0.07799179358462849 |
[195,152] |
[248,149,231] |
0 |
hSpCas9 |
negative selection |
4937962 |
166039451 |
166039473 |
2 |
- |
27760321 |
HT29 |
viability after 22 days |
TTGGACTCGCCAATGTGGAAGG |
SCN1A |
ENSG00000144285 |
0.6212660075857261 |
[360,281] |
[491,586,638] |
7 |
hSpCas9 |
negative selection |
5021421 |
166039479 |
166039501 |
2 |
- |
27760321 |
HT29 |
viability after 22 days |
TTTATTGTGACGCTTAGCCTGG |
SCN1A |
ENSG00000144285 |
-0.7183295640524783 |
[315,246] |
[201,226,163] |
-6 |
hSpCas9 |
negative selection |
5021422 |
166042356 |
166042378 |
2 |
+ |
27760321 |
HT29 |
viability after 22 days |
TAGAAAGTCCATGGAAACGTGG |
SCN1A |
ENSG00000144285 |
0.27023350861379347 |
[181,141] |
[234,248,192] |
3 |
hSpCas9 |
negative selection |
5021423 |
166043796 |
166043818 |
2 |
- |
27760321 |
HT29 |
viability after 22 days |
TGGCAGTGTTTCCAGCGAATGG |
SCN1A |
ENSG00000144285 |
0.23632095147837268 |
[472,368] |
[555,628,534] |
2 |
hSpCas9 |
negative selection |
5021424 |
166047653 |
166047675 |
2 |
- |
27760321 |
HT29 |
viability after 22 days |
TTGTTTCGACTAATGACTCAGG |
SCN1A |
ENSG00000144285 |
-0.6798783095368661 |
[195,152] |
[127,93,155] |
-5 |
hSpCas9 |
negative selection |
5021425 |
166039451 |
166039473 |
2 |
- |
27760321 |
HT29 |
viability after 19 days |
TTGGACTCGCCAATGTGGAAGG |
SCN1A |
ENSG00000144285 |
0.023848752265659162 |
[360,281] |
[488,502,149] |
0 |
hSpCas9 |
negative selection |
5104884 |
166039479 |
166039501 |
2 |
- |
27760321 |
HT29 |
viability after 19 days |
TTTATTGTGACGCTTAGCCTGG |
SCN1A |
ENSG00000144285 |
-0.6654823121795237 |
[315,246] |
[364,169,94] |
-5 |
hSpCas9 |
negative selection |
5104885 |
166042356 |
166042378 |
2 |
+ |
27760321 |
HT29 |
viability after 19 days |
TAGAAAGTCCATGGAAACGTGG |
SCN1A |
ENSG00000144285 |
0.7342558123082795 |
[181,141] |
[356,169,398] |
7 |
hSpCas9 |
negative selection |
5104886 |
166043796 |
166043818 |
2 |
- |
27760321 |
HT29 |
viability after 19 days |
TGGCAGTGTTTCCAGCGAATGG |
SCN1A |
ENSG00000144285 |
0.3572189505363742 |
[472,368] |
[572,782,493] |
3 |
hSpCas9 |
negative selection |
5104887 |
166047653 |
166047675 |
2 |
- |
27760321 |
HT29 |
viability after 19 days |
TTGTTTCGACTAATGACTCAGG |
SCN1A |
ENSG00000144285 |
-0.5589593332605709 |
[195,152] |
[93,65,237] |
-5 |
hSpCas9 |
negative selection |
5104888 |
166039451 |
166039473 |
2 |
- |
27760321 |
HT29 |
viability after 16 days |
TTGGACTCGCCAATGTGGAAGG |
SCN1A |
ENSG00000144285 |
0.5866341785623661 |
[360,281] |
[526,511,580] |
6 |
hSpCas9 |
negative selection |
5188347 |
166039479 |
166039501 |
2 |
- |
27760321 |
HT29 |
viability after 16 days |
TTTATTGTGACGCTTAGCCTGG |
SCN1A |
ENSG00000144285 |
-0.7247892583335676 |
[315,246] |
[234,110,231] |
-6 |
hSpCas9 |
negative selection |
5188348 |
166042356 |
166042378 |
2 |
+ |
27760321 |
HT29 |
viability after 16 days |
TAGAAAGTCCATGGAAACGTGG |
SCN1A |
ENSG00000144285 |
-0.4017242411458566 |
[181,141] |
[177,37,201] |
-4 |
hSpCas9 |
negative selection |
5188349 |
166043796 |
166043818 |
2 |
- |
27760321 |
HT29 |
viability after 16 days |
TGGCAGTGTTTCCAGCGAATGG |
SCN1A |
ENSG00000144285 |
0.3807611929918021 |
[472,368] |
[610,592,635] |
4 |
hSpCas9 |
negative selection |
5188350 |
166047653 |
166047675 |
2 |
- |
27760321 |
HT29 |
viability after 16 days |
TTGTTTCGACTAATGACTCAGG |
SCN1A |
ENSG00000144285 |
-1.1212637187593086 |
[195,152] |
[157,38,79] |
-7 |
hSpCas9 |
negative selection |
5188351 |
166039451 |
166039473 |
2 |
- |
27760321 |
HT29 |
viability after 13 days |
TTGGACTCGCCAATGTGGAAGG |
SCN1A |
ENSG00000144285 |
0.4080789804581597 |
[360,281] |
[525,486,472] |
5 |
hSpCas9 |
negative selection |
5271810 |
166039479 |
166039501 |
2 |
- |
27760321 |
HT29 |
viability after 13 days |
TTTATTGTGACGCTTAGCCTGG |
SCN1A |
ENSG00000144285 |
-0.45546642057164427 |
[315,246] |
[315,256,146] |
-5 |
hSpCas9 |
negative selection |
5271811 |
166042356 |
166042378 |
2 |
+ |
27760321 |
HT29 |
viability after 13 days |
TAGAAAGTCCATGGAAACGTGG |
SCN1A |
ENSG00000144285 |
0.06670045745995079 |
[181,141] |
[117,213,254] |
0 |
hSpCas9 |
negative selection |
5271812 |
166043796 |
166043818 |
2 |
- |
27760321 |
HT29 |
viability after 13 days |
TGGCAGTGTTTCCAGCGAATGG |
SCN1A |
ENSG00000144285 |
0.8553545018283673 |
[472,368] |
[771,945,929] |
9 |
hSpCas9 |
negative selection |
5271813 |
166047653 |
166047675 |
2 |
- |
27760321 |
HT29 |
viability after 13 days |
TTGTTTCGACTAATGACTCAGG |
SCN1A |
ENSG00000144285 |
-0.6463425907079061 |
[195,152] |
[238,57,92] |
-6 |
hSpCas9 |
negative selection |
5271814 |
166039451 |
166039473 |
2 |
- |
27760321 |
HT29 |
viability after 10 days |
TTGGACTCGCCAATGTGGAAGG |
SCN1A |
ENSG00000144285 |
-0.17127500174248733 |
[360,281] |
[357,226,477] |
-2 |
hSpCas9 |
negative selection |
5355273 |
166039479 |
166039501 |
2 |
- |
27760321 |
HT29 |
viability after 10 days |
TTTATTGTGACGCTTAGCCTGG |
SCN1A |
ENSG00000144285 |
-0.6639363207482114 |
[315,246] |
[378,60,220] |
-7 |
hSpCas9 |
negative selection |
5355274 |
166042356 |
166042378 |
2 |
+ |
27760321 |
HT29 |
viability after 10 days |
TAGAAAGTCCATGGAAACGTGG |
SCN1A |
ENSG00000144285 |
0.0009539473718329639 |
[181,141] |
[343,155,107] |
0 |
hSpCas9 |
negative selection |
5355275 |
166043796 |
166043818 |
2 |
- |
27760321 |
HT29 |
viability after 10 days |
TGGCAGTGTTTCCAGCGAATGG |
SCN1A |
ENSG00000144285 |
0.1030826195637064 |
[472,368] |
[490,685,520] |
1 |
hSpCas9 |
negative selection |
5355276 |
166047653 |
166047675 |
2 |
- |
27760321 |
HT29 |
viability after 10 days |
TTGTTTCGACTAATGACTCAGG |
SCN1A |
ENSG00000144285 |
-1.2274193098255137 |
[195,152] |
[75,117,85] |
-8 |
hSpCas9 |
negative selection |
5355277 |
166039451 |
166039473 |
2 |
- |
27760321 |
MOLM13 |
viability |
TTGGACTCGCCAATGTGGAAGG |
SCN1A |
ENSG00000144285 |
1.1141070974287537 |
[399,360] |
[796,180] |
7 |
hSpCas9 |
negative selection |
5438736 |
166039479 |
166039501 |
2 |
- |
27760321 |
MOLM13 |
viability |
TTTATTGTGACGCTTAGCCTGG |
SCN1A |
ENSG00000144285 |
0.790971028879722 |
[312,315] |
[238,366] |
5 |
hSpCas9 |
negative selection |
5438737 |
166042356 |
166042378 |
2 |
+ |
27760321 |
MOLM13 |
viability |
TAGAAAGTCCATGGAAACGTGG |
SCN1A |
ENSG00000144285 |
1.0490441843157294 |
[202,181] |
[298,160] |
7 |
hSpCas9 |
negative selection |
5438738 |
166043796 |
166043818 |
2 |
- |
27760321 |
MOLM13 |
viability |
TGGCAGTGTTTCCAGCGAATGG |
SCN1A |
ENSG00000144285 |
0.5934231246815229 |
[577,472] |
[570,337] |
4 |
hSpCas9 |
negative selection |
5438739 |
166047653 |
166047675 |
2 |
- |
27760321 |
MOLM13 |
viability |
TTGTTTCGACTAATGACTCAGG |
SCN1A |
ENSG00000144285 |
-1.5677127776683522 |
[240,195] |
[69,16] |
-7 |
hSpCas9 |
negative selection |
5438740 |
166073286 |
166073309 |
2 |
+ |
27661255 |
K562 |
viability |
GTTGGTGCTACAACAGTCCAAGG |
SCN1A |
ENSG00000144285 |
0.0967656538841144 |
[2910,3442] |
[2980,2470] |
3 |
dCas9-KRAB |
negative selection |
5509627 |
166073569 |
166073592 |
2 |
+ |
27661255 |
K562 |
viability |
GTGAAGAAGTTGAAGCTGTCAGG |
SCN1A |
ENSG00000144285 |
0.10726186010280059 |
[1624,1910] |
[1606,1439] |
4 |
dCas9-KRAB |
negative selection |
5509628 |
166073136 |
166073159 |
2 |
- |
27661255 |
K562 |
viability |
GCACCATGACAAATAAAAAGAGG |
SCN1A |
ENSG00000144285 |
-0.245981743797621 |
[638,525] |
[491,309] |
-6 |
dCas9-KRAB |
negative selection |
5509629 |
166073339 |
166073362 |
2 |
- |
27661255 |
K562 |
viability |
GAAAGTGAGTGTTTTTTATCAGG |
SCN1A |
ENSG00000144285 |
-0.0036036344185204072 |
[508,566] |
[483,379] |
0 |
dCas9-KRAB |
negative selection |
5509630 |
166048914 |
166048937 |
2 |
+ |
27260156 |
BXPC3 |
viability |
GTGCATCTAAAAAACCCTCCAGG |
SCN1A |
ENSG00000144285 |
0.6203989335482603 |
[23] |
[37,52,22,38] |
9 |
hSpCas9 |
negative selection |
5569064 |
166051889 |
166051912 |
2 |
- |
27260156 |
BXPC3 |
viability |
CTGAGCGTATTTGCTCTAATTGG |
SCN1A |
ENSG00000144285 |
0.36422692800390993 |
[370] |
[413,497,558,537] |
7 |
hSpCas9 |
negative selection |
5569065 |
166051971 |
166051994 |
2 |
- |
27260156 |
BXPC3 |
viability |
TTCAGGCCTGAAAACCATTGTGG |
SCN1A |
ENSG00000144285 |
0.04787275553574676 |
[460] |
[432,415,520,650] |
1 |
hSpCas9 |
negative selection |
5569066 |
166048932 |
166048955 |
2 |
- |
27260156 |
BXPC3 |
viability |
AACAGGATATCATTATTTCCTGG |
SCN1A |
ENSG00000144285 |
-0.027813567164119535 |
[628] |
[626,606,776,560] |
0 |
hSpCas9 |
negative selection |
5633318 |
166054653 |
166054676 |
2 |
+ |
27260156 |
BXPC3 |
viability |
GTGAAATCGAGCCAGTTCCATGG |
SCN1A |
ENSG00000144285 |
0.3087396475867029 |
[223] |
[343,279,262,261] |
6 |
hSpCas9 |
negative selection |
5633319 |
166054712 |
166054735 |
2 |
- |
27260156 |
BXPC3 |
viability |
CACTTATAAAAATTATTGCAAGG |
SCN1A |
ENSG00000144285 |
0.22174838378801692 |
[330] |
[435,345,357,479] |
5 |
hSpCas9 |
negative selection |
5633320 |
166048914 |
166048937 |
2 |
+ |
27260156 |
A673 |
viability |
GTGCATCTAAAAAACCCTCCAGG |
SCN1A |
ENSG00000144285 |
0.41360155149693334 |
[23] |
[32,37,25,56] |
8 |
hSpCas9 |
negative selection |
5690315 |
166051889 |
166051912 |
2 |
- |
27260156 |
A673 |
viability |
CTGAGCGTATTTGCTCTAATTGG |
SCN1A |
ENSG00000144285 |
0.0370368971282915 |
[370] |
[444,416,470,495] |
0 |
hSpCas9 |
negative selection |
5690316 |
166051971 |
166051994 |
2 |
- |
27260156 |
A673 |
viability |
TTCAGGCCTGAAAACCATTGTGG |
SCN1A |
ENSG00000144285 |
-0.001350078325864621 |
[460] |
[592,455,608,559] |
0 |
hSpCas9 |
negative selection |
5690317 |
166048932 |
166048955 |
2 |
- |
27260156 |
A673 |
viability |
AACAGGATATCATTATTTCCTGG |
SCN1A |
ENSG00000144285 |
-0.20502088711856972 |
[628] |
[686,583,707,644] |
-5 |
hSpCas9 |
negative selection |
5754569 |
166054653 |
166054676 |
2 |
+ |
27260156 |
A673 |
viability |
GTGAAATCGAGCCAGTTCCATGG |
SCN1A |
ENSG00000144285 |
-0.029539449712548294 |
[223] |
[292,305,214,240] |
0 |
hSpCas9 |
negative selection |
5754570 |
166054712 |
166054735 |
2 |
- |
27260156 |
A673 |
viability |
CACTTATAAAAATTATTGCAAGG |
SCN1A |
ENSG00000144285 |
-0.1189338070369994 |
[330] |
[465,340,302,365] |
-3 |
hSpCas9 |
negative selection |
5754571 |
166048914 |
166048937 |
2 |
+ |
27260156 |
A375 |
viability |
GTGCATCTAAAAAACCCTCCAGG |
SCN1A |
ENSG00000144285 |
-0.06040304646584982 |
[23] |
[26,9,21,43] |
-1 |
hSpCas9 |
negative selection |
5811566 |
166051889 |
166051912 |
2 |
- |
27260156 |
A375 |
viability |
CTGAGCGTATTTGCTCTAATTGG |
SCN1A |
ENSG00000144285 |
0.26596722425631497 |
[370] |
[585,542,530,435] |
4 |
hSpCas9 |
negative selection |
5811567 |
166051971 |
166051994 |
2 |
- |
27260156 |
A375 |
viability |
TTCAGGCCTGAAAACCATTGTGG |
SCN1A |
ENSG00000144285 |
0.3288682225434879 |
[460] |
[967,817,507,456] |
5 |
hSpCas9 |
negative selection |
5811568 |
166048932 |
166048955 |
2 |
- |
27260156 |
A375 |
viability |
AACAGGATATCATTATTTCCTGG |
SCN1A |
ENSG00000144285 |
0.049536433307817984 |
[628] |
[888,807,727,635] |
0 |
hSpCas9 |
negative selection |
5875820 |
166054653 |
166054676 |
2 |
+ |
27260156 |
A375 |
viability |
GTGAAATCGAGCCAGTTCCATGG |
SCN1A |
ENSG00000144285 |
0.07727016964191757 |
[223] |
[336,274,276,220] |
1 |
hSpCas9 |
negative selection |
5875821 |
166054712 |
166054735 |
2 |
- |
27260156 |
A375 |
viability |
CACTTATAAAAATTATTGCAAGG |
SCN1A |
ENSG00000144285 |
0.5251517698583835 |
[330] |
[657,504,581,480] |
7 |
hSpCas9 |
negative selection |
5875822 |
166048914 |
166048937 |
2 |
+ |
27260156 |
COLO741 |
viability |
GTGCATCTAAAAAACCCTCCAGG |
SCN1A |
ENSG00000144285 |
-0.1490573560180355 |
[23] |
[18,18,42] |
-3 |
hSpCas9 |
negative selection |
5932817 |
166051889 |
166051912 |
2 |
- |
27260156 |
COLO741 |
viability |
CTGAGCGTATTTGCTCTAATTGG |
SCN1A |
ENSG00000144285 |
0.34314923665551184 |
[370] |
[513,632,644] |
7 |
hSpCas9 |
negative selection |
5932818 |
166051971 |
166051994 |
2 |
- |
27260156 |
COLO741 |
viability |
TTCAGGCCTGAAAACCATTGTGG |
SCN1A |
ENSG00000144285 |
0.19102383541576118 |
[460] |
[733,797,501] |
4 |
hSpCas9 |
negative selection |
5932819 |
166048932 |
166048955 |
2 |
- |
27260156 |
COLO741 |
viability |
AACAGGATATCATTATTTCCTGG |
SCN1A |
ENSG00000144285 |
-0.47873203389192115 |
[628] |
[592,626,514] |
-7 |
hSpCas9 |
negative selection |
5997071 |
166054653 |
166054676 |
2 |
+ |
27260156 |
COLO741 |
viability |
GTGAAATCGAGCCAGTTCCATGG |
SCN1A |
ENSG00000144285 |
0.14146078840301368 |
[223] |
[419,302,237] |
3 |
hSpCas9 |
negative selection |
5997072 |
166054712 |
166054735 |
2 |
- |
27260156 |
COLO741 |
viability |
CACTTATAAAAATTATTGCAAGG |
SCN1A |
ENSG00000144285 |
0.1041810966709183 |
[330] |
[408,425,518] |
2 |
hSpCas9 |
negative selection |
5997073 |
166048914 |
166048937 |
2 |
+ |
27260156 |
CAL120 |
viability |
GTGCATCTAAAAAACCCTCCAGG |
SCN1A |
ENSG00000144285 |
-0.088252996063237 |
[23] |
[45,14,25] |
-1 |
hSpCas9 |
negative selection |
6054068 |
166051889 |
166051912 |
2 |
- |
27260156 |
CAL120 |
viability |
CTGAGCGTATTTGCTCTAATTGG |
SCN1A |
ENSG00000144285 |
0.37985545617492755 |
[370] |
[511,810,467] |
6 |
hSpCas9 |
negative selection |
6054069 |
166051971 |
166051994 |
2 |
- |
27260156 |
CAL120 |
viability |
TTCAGGCCTGAAAACCATTGTGG |
SCN1A |
ENSG00000144285 |
-0.06671900294623687 |
[460] |
[544,461,633] |
-1 |
hSpCas9 |
negative selection |
6054070 |
166048932 |
166048955 |
2 |
- |
27260156 |
CAL120 |
viability |
AACAGGATATCATTATTTCCTGG |
SCN1A |
ENSG00000144285 |
-0.19785634537797456 |
[628] |
[816,444,802] |
-3 |
hSpCas9 |
negative selection |
6118322 |
166054653 |
166054676 |
2 |
+ |
27260156 |
CAL120 |
viability |
GTGAAATCGAGCCAGTTCCATGG |
SCN1A |
ENSG00000144285 |
-0.19752749096746824 |
[223] |
[382,169,197] |
-3 |
hSpCas9 |
negative selection |
6118323 |
166054712 |
166054735 |
2 |
- |
27260156 |
CAL120 |
viability |
CACTTATAAAAATTATTGCAAGG |
SCN1A |
ENSG00000144285 |
0.32939577951471916 |
[330] |
[690,509,379] |
5 |
hSpCas9 |
negative selection |
6118324 |
166048914 |
166048937 |
2 |
+ |
27260156 |
CADOES1 |
viability |
GTGCATCTAAAAAACCCTCCAGG |
SCN1A |
ENSG00000144285 |
1.1274349322731232 |
[23] |
[77,55,37,21] |
9 |
hSpCas9 |
negative selection |
6175319 |
166051889 |
166051912 |
2 |
- |
27260156 |
CADOES1 |
viability |
CTGAGCGTATTTGCTCTAATTGG |
SCN1A |
ENSG00000144285 |
0.453726096137705 |
[370] |
[447,551,456,431] |
7 |
hSpCas9 |
negative selection |
6175320 |
166051971 |
166051994 |
2 |
- |
27260156 |
CADOES1 |
viability |
TTCAGGCCTGAAAACCATTGTGG |
SCN1A |
ENSG00000144285 |
-0.04258257596472299 |
[460] |
[441,422,309,492] |
0 |
hSpCas9 |
negative selection |
6175321 |
166048932 |
166048955 |
2 |
- |
27260156 |
CADOES1 |
viability |
AACAGGATATCATTATTTCCTGG |
SCN1A |
ENSG00000144285 |
-0.26628341644547493 |
[628] |
[489,549,489,412] |
-4 |
hSpCas9 |
negative selection |
6239573 |
166054653 |
166054676 |
2 |
+ |
27260156 |
CADOES1 |
viability |
GTGAAATCGAGCCAGTTCCATGG |
SCN1A |
ENSG00000144285 |
-0.02407413523803137 |
[223] |
[180,213,209,214] |
0 |
hSpCas9 |
negative selection |
6239574 |
166054712 |
166054735 |
2 |
- |
27260156 |
CADOES1 |
viability |
CACTTATAAAAATTATTGCAAGG |
SCN1A |
ENSG00000144285 |
0.41510193838980053 |
[330] |
[465,395,388,389] |
7 |
hSpCas9 |
negative selection |
6239575 |
166048914 |
166048937 |
2 |
+ |
27260156 |
EWS502 |
viability |
GTGCATCTAAAAAACCCTCCAGG |
SCN1A |
ENSG00000144285 |
-0.22563679820934723 |
[23] |
[7,23,28,27] |
-4 |
hSpCas9 |
negative selection |
6296570 |
166051889 |
166051912 |
2 |
- |
27260156 |
EWS502 |
viability |
CTGAGCGTATTTGCTCTAATTGG |
SCN1A |
ENSG00000144285 |
0.2350504213937671 |
[370] |
[480,432,393,543] |
4 |
hSpCas9 |
negative selection |
6296571 |
166051971 |
166051994 |
2 |
- |
27260156 |
EWS502 |
viability |
TTCAGGCCTGAAAACCATTGTGG |
SCN1A |
ENSG00000144285 |
0.07949025478090854 |
[460] |
[529,458,492,584] |
1 |
hSpCas9 |
negative selection |
6296572 |
166048932 |
166048955 |
2 |
- |
27260156 |
EWS502 |
viability |
AACAGGATATCATTATTTCCTGG |
SCN1A |
ENSG00000144285 |
-0.15952104906375647 |
[628] |
[558,522,678,633] |
-3 |
hSpCas9 |
negative selection |
6360824 |
166054653 |
166054676 |
2 |
+ |
27260156 |
EWS502 |
viability |
GTGAAATCGAGCCAGTTCCATGG |
SCN1A |
ENSG00000144285 |
0.0989731715583334 |
[223] |
[142,416,345,106] |
1 |
hSpCas9 |
negative selection |
6360825 |
166054712 |
166054735 |
2 |
- |
27260156 |
EWS502 |
viability |
CACTTATAAAAATTATTGCAAGG |
SCN1A |
ENSG00000144285 |
0.20045438751864064 |
[330] |
[395,472,444,285] |
3 |
hSpCas9 |
negative selection |
6360826 |
166048914 |
166048937 |
2 |
+ |
27260156 |
EW8 |
viability |
GTGCATCTAAAAAACCCTCCAGG |
SCN1A |
ENSG00000144285 |
0.313604039166707 |
[23] |
[17,51,18,7] |
6 |
hSpCas9 |
negative selection |
6417821 |
166051889 |
166051912 |
2 |
- |
27260156 |
EW8 |
viability |
CTGAGCGTATTTGCTCTAATTGG |
SCN1A |
ENSG00000144285 |
0.03507659076984315 |
[370] |
[291,322,281,336] |
0 |
hSpCas9 |
negative selection |
6417822 |
166051971 |
166051994 |
2 |
- |
27260156 |
EW8 |
viability |
TTCAGGCCTGAAAACCATTGTGG |
SCN1A |
ENSG00000144285 |
0.23876631845856747 |
[460] |
[514,341,432,480] |
4 |
hSpCas9 |
negative selection |
6417823 |
166048932 |
166048955 |
2 |
- |
27260156 |
EW8 |
viability |
AACAGGATATCATTATTTCCTGG |
SCN1A |
ENSG00000144285 |
-0.01292559025965978 |
[628] |
[476,458,479,603] |
0 |
hSpCas9 |
negative selection |
6482075 |
166054653 |
166054676 |
2 |
+ |
27260156 |
EW8 |
viability |
GTGAAATCGAGCCAGTTCCATGG |
SCN1A |
ENSG00000144285 |
-0.07308671095895858 |
[223] |
[184,160,202,136] |
-1 |
hSpCas9 |
negative selection |
6482076 |
166054712 |
166054735 |
2 |
- |
27260156 |
EW8 |
viability |
CACTTATAAAAATTATTGCAAGG |
SCN1A |
ENSG00000144285 |
0.06459477318108936 |
[330] |
[279,172,240,432] |
1 |
hSpCas9 |
negative selection |
6482077 |
166048914 |
166048937 |
2 |
+ |
27260156 |
CORL105 |
viability |
GTGCATCTAAAAAACCCTCCAGG |
SCN1A |
ENSG00000144285 |
0.9700559850394073 |
[23] |
[30,62,91,38] |
9 |
hSpCas9 |
negative selection |
6539072 |
166051889 |
166051912 |
2 |
- |
27260156 |
CORL105 |
viability |
CTGAGCGTATTTGCTCTAATTGG |
SCN1A |
ENSG00000144285 |
-0.012052447463848592 |
[370] |
[359,358,498,513] |
0 |
hSpCas9 |
negative selection |
6539073 |
166051971 |
166051994 |
2 |
- |
27260156 |
CORL105 |
viability |
TTCAGGCCTGAAAACCATTGTGG |
SCN1A |
ENSG00000144285 |
0.23541839208137855 |
[460] |
[616,540,810,600] |
4 |
hSpCas9 |
negative selection |
6539074 |
166048932 |
166048955 |
2 |
- |
27260156 |
CORL105 |
viability |
AACAGGATATCATTATTTCCTGG |
SCN1A |
ENSG00000144285 |
-0.1482650729725981 |
[628] |
[515,487,935,757] |
-3 |
hSpCas9 |
negative selection |
6603326 |
166054653 |
166054676 |
2 |
+ |
27260156 |
CORL105 |
viability |
GTGAAATCGAGCCAGTTCCATGG |
SCN1A |
ENSG00000144285 |
0.012778659281236449 |
[223] |
[255,224,367,225] |
0 |
hSpCas9 |
negative selection |
6603327 |
166054712 |
166054735 |
2 |
- |
27260156 |
CORL105 |
viability |
CACTTATAAAAATTATTGCAAGG |
SCN1A |
ENSG00000144285 |
0.32133709753744943 |
[330] |
[542,490,429,465] |
6 |
hSpCas9 |
negative selection |
6603328 |
166048914 |
166048937 |
2 |
+ |
27260156 |
HS294T |
viability |
GTGCATCTAAAAAACCCTCCAGG |
SCN1A |
ENSG00000144285 |
1.0369002521882664 |
[23] |
[39,0,12,20] |
9 |
hSpCas9 |
negative selection |
6660323 |
166051889 |
166051912 |
2 |
- |
27260156 |
HS294T |
viability |
CTGAGCGTATTTGCTCTAATTGG |
SCN1A |
ENSG00000144285 |
-0.4710569496845361 |
[370] |
[94,103,108,106] |
-6 |
hSpCas9 |
negative selection |
6660324 |
166051971 |
166051994 |
2 |
- |
27260156 |
HS294T |
viability |
TTCAGGCCTGAAAACCATTGTGG |
SCN1A |
ENSG00000144285 |
0.09187701239634687 |
[460] |
[156,202,146,267] |
1 |
hSpCas9 |
negative selection |
6660325 |
166048932 |
166048955 |
2 |
- |
27260156 |
HS294T |
viability |
AACAGGATATCATTATTTCCTGG |
SCN1A |
ENSG00000144285 |
-0.02681680840646783 |
[628] |
[235,206,230,289] |
0 |
hSpCas9 |
negative selection |
6724577 |
166054653 |
166054676 |
2 |
+ |
27260156 |
HS294T |
viability |
GTGAAATCGAGCCAGTTCCATGG |
SCN1A |
ENSG00000144285 |
0.24978532192009983 |
[223] |
[183,54,59,106] |
3 |
hSpCas9 |
negative selection |
6724578 |
166054712 |
166054735 |
2 |
- |
27260156 |
HS294T |
viability |
CACTTATAAAAATTATTGCAAGG |
SCN1A |
ENSG00000144285 |
0.08034178459312907 |
[330] |
[169,159,78,125] |
1 |
hSpCas9 |
negative selection |
6724579 |
166048914 |
166048937 |
2 |
+ |
27260156 |
HCC44 |
viability |
GTGCATCTAAAAAACCCTCCAGG |
SCN1A |
ENSG00000144285 |
0.6212057400653235 |
[23] |
[59,8,24,74] |
8 |
hSpCas9 |
negative selection |
6781574 |
166051889 |
166051912 |
2 |
- |
27260156 |
HCC44 |
viability |
CTGAGCGTATTTGCTCTAATTGG |
SCN1A |
ENSG00000144285 |
0.2981496672639712 |
[370] |
[493,451,652,491] |
5 |
hSpCas9 |
negative selection |
6781575 |
166051971 |
166051994 |
2 |
- |
27260156 |
HCC44 |
viability |
TTCAGGCCTGAAAACCATTGTGG |
SCN1A |
ENSG00000144285 |
-0.03088522594512403 |
[460] |
[495,483,623,456] |
0 |
hSpCas9 |
negative selection |
6781576 |
166048932 |
166048955 |
2 |
- |
27260156 |
HCC44 |
viability |
AACAGGATATCATTATTTCCTGG |
SCN1A |
ENSG00000144285 |
0.21513687455809544 |
[628] |
[923,759,1194,509] |
3 |
hSpCas9 |
negative selection |
6845828 |
166054653 |
166054676 |
2 |
+ |
27260156 |
HCC44 |
viability |
GTGAAATCGAGCCAGTTCCATGG |
SCN1A |
ENSG00000144285 |
-0.05410635298402444 |
[223] |
[227,252,282,214] |
-1 |
hSpCas9 |
negative selection |
6845829 |
166054712 |
166054735 |
2 |
- |
27260156 |
HCC44 |
viability |
CACTTATAAAAATTATTGCAAGG |
SCN1A |
ENSG00000144285 |
0.2783425571608928 |
[330] |
[375,463,398,551] |
4 |
hSpCas9 |
negative selection |
6845830 |
166048914 |
166048937 |
2 |
+ |
27260156 |
G402 |
viability |
GTGCATCTAAAAAACCCTCCAGG |
SCN1A |
ENSG00000144285 |
-0.14645502286774903 |
[23] |
[57,35,14,2] |
-2 |
hSpCas9 |
negative selection |
6902825 |
166051889 |
166051912 |
2 |
- |
27260156 |
G402 |
viability |
CTGAGCGTATTTGCTCTAATTGG |
SCN1A |
ENSG00000144285 |
0.14340302455220746 |
[370] |
[356,749,279,599] |
1 |
hSpCas9 |
negative selection |
6902826 |
166051971 |
166051994 |
2 |
- |
27260156 |
G402 |
viability |
TTCAGGCCTGAAAACCATTGTGG |
SCN1A |
ENSG00000144285 |
0.29458937926273154 |
[460] |
[1247,790,653,175] |
3 |
hSpCas9 |
negative selection |
6902827 |
166048932 |
166048955 |
2 |
- |
27260156 |
G402 |
viability |
AACAGGATATCATTATTTCCTGG |
SCN1A |
ENSG00000144285 |
0.07731090887619768 |
[628] |
[1129,817,1062,296] |
1 |
hSpCas9 |
negative selection |
6967079 |
166054653 |
166054676 |
2 |
+ |
27260156 |
G402 |
viability |
GTGAAATCGAGCCAGTTCCATGG |
SCN1A |
ENSG00000144285 |
-0.460062506727434 |
[223] |
[550,104,144,45] |
-5 |
hSpCas9 |
negative selection |
6967080 |
166054712 |
166054735 |
2 |
- |
27260156 |
G402 |
viability |
CACTTATAAAAATTATTGCAAGG |
SCN1A |
ENSG00000144285 |
0.5932448648592862 |
[330] |
[658,429,888,460] |
7 |
hSpCas9 |
negative selection |
6967081 |
166048914 |
166048937 |
2 |
+ |
27260156 |
L33 |
viability |
GTGCATCTAAAAAACCCTCCAGG |
SCN1A |
ENSG00000144285 |
0.588034078634903 |
[23] |
[26,20,11,46] |
9 |
hSpCas9 |
negative selection |
7024076 |
166051889 |
166051912 |
2 |
- |
27260156 |
L33 |
viability |
CTGAGCGTATTTGCTCTAATTGG |
SCN1A |
ENSG00000144285 |
0.10941505193821746 |
[370] |
[393,166,310,305] |
2 |
hSpCas9 |
negative selection |
7024077 |
166051971 |
166051994 |
2 |
- |
27260156 |
L33 |
viability |
TTCAGGCCTGAAAACCATTGTGG |
SCN1A |
ENSG00000144285 |
0.4827716974345013 |
[460] |
[664,286,385,596] |
8 |
hSpCas9 |
negative selection |
7024078 |
166048932 |
166048955 |
2 |
- |
27260156 |
L33 |
viability |
AACAGGATATCATTATTTCCTGG |
SCN1A |
ENSG00000144285 |
0.16993022454167067 |
[628] |
[863,270,411,645] |
4 |
hSpCas9 |
negative selection |
7088330 |
166054653 |
166054676 |
2 |
+ |
27260156 |
L33 |
viability |
GTGAAATCGAGCCAGTTCCATGG |
SCN1A |
ENSG00000144285 |
0.15060813659275474 |
[223] |
[251,105,158,230] |
3 |
hSpCas9 |
negative selection |
7088331 |
166054712 |
166054735 |
2 |
- |
27260156 |
L33 |
viability |
CACTTATAAAAATTATTGCAAGG |
SCN1A |
ENSG00000144285 |
0.09231913392763508 |
[330] |
[340,126,244,370] |
2 |
hSpCas9 |
negative selection |
7088332 |
166048914 |
166048937 |
2 |
+ |
27260156 |
K562 |
viability |
GTGCATCTAAAAAACCCTCCAGG |
SCN1A |
ENSG00000144285 |
1.0568973752640827 |
[23] |
[146,12,18,8] |
9 |
hSpCas9 |
negative selection |
7145327 |
166051889 |
166051912 |
2 |
- |
27260156 |
K562 |
viability |
CTGAGCGTATTTGCTCTAATTGG |
SCN1A |
ENSG00000144285 |
0.03552759500072067 |
[370] |
[410,453,162,332] |
0 |
hSpCas9 |
negative selection |
7145328 |
166051971 |
166051994 |
2 |
- |
27260156 |
K562 |
viability |
TTCAGGCCTGAAAACCATTGTGG |
SCN1A |
ENSG00000144285 |
-0.48381360534194107 |
[460] |
[143,291,109,576] |
-5 |
hSpCas9 |
negative selection |
7145329 |
166048932 |
166048955 |
2 |
- |
27260156 |
K562 |
viability |
AACAGGATATCATTATTTCCTGG |
SCN1A |
ENSG00000144285 |
-0.0768016045488833 |
[628] |
[394,335,770,584] |
-1 |
hSpCas9 |
negative selection |
7209581 |
166054653 |
166054676 |
2 |
+ |
27260156 |
K562 |
viability |
GTGAAATCGAGCCAGTTCCATGG |
SCN1A |
ENSG00000144285 |
0.0870536332408256 |
[223] |
[160,194,424,73] |
1 |
hSpCas9 |
negative selection |
7209582 |
166054712 |
166054735 |
2 |
- |
27260156 |
K562 |
viability |
CACTTATAAAAATTATTGCAAGG |
SCN1A |
ENSG00000144285 |
0.2157710220556897 |
[330] |
[417,501,146,313] |
2 |
hSpCas9 |
negative selection |
7209583 |
166048914 |
166048937 |
2 |
+ |
27260156 |
HT29 |
viability |
GTGCATCTAAAAAACCCTCCAGG |
SCN1A |
ENSG00000144285 |
0.5512196565740983 |
[23] |
[50,63,40,19] |
9 |
hSpCas9 |
negative selection |
7266578 |
166051889 |
166051912 |
2 |
- |
27260156 |
HT29 |
viability |
CTGAGCGTATTTGCTCTAATTGG |
SCN1A |
ENSG00000144285 |
0.1358002402171084 |
[370] |
[527,471,609,382] |
2 |
hSpCas9 |
negative selection |
7266579 |
166051971 |
166051994 |
2 |
- |
27260156 |
HT29 |
viability |
TTCAGGCCTGAAAACCATTGTGG |
SCN1A |
ENSG00000144285 |
0.17365125838315332 |
[460] |
[657,799,529,560] |
3 |
hSpCas9 |
negative selection |
7266580 |
166048932 |
166048955 |
2 |
- |
27260156 |
HT29 |
viability |
AACAGGATATCATTATTTCCTGG |
SCN1A |
ENSG00000144285 |
-0.11494810464689126 |
[628] |
[713,639,950,530] |
-2 |
hSpCas9 |
negative selection |
7330832 |
166054653 |
166054676 |
2 |
+ |
27260156 |
HT29 |
viability |
GTGAAATCGAGCCAGTTCCATGG |
SCN1A |
ENSG00000144285 |
0.2515165251540943 |
[223] |
[245,516,344,210] |
5 |
hSpCas9 |
negative selection |
7330833 |
166054712 |
166054735 |
2 |
- |
27260156 |
HT29 |
viability |
CACTTATAAAAATTATTGCAAGG |
SCN1A |
ENSG00000144285 |
0.28159506224518305 |
[330] |
[531,623,495,334] |
5 |
hSpCas9 |
negative selection |
7330834 |
166048914 |
166048937 |
2 |
+ |
27260156 |
MHHES1 |
viability |
GTGCATCTAAAAAACCCTCCAGG |
SCN1A |
ENSG00000144285 |
0.08619382360574335 |
[23] |
[1,50,60,4] |
1 |
hSpCas9 |
negative selection |
7387829 |
166051889 |
166051912 |
2 |
- |
27260156 |
MHHES1 |
viability |
CTGAGCGTATTTGCTCTAATTGG |
SCN1A |
ENSG00000144285 |
0.11408286576948595 |
[370] |
[616,531,441,276] |
2 |
hSpCas9 |
negative selection |
7387830 |
166051971 |
166051994 |
2 |
- |
27260156 |
MHHES1 |
viability |
TTCAGGCCTGAAAACCATTGTGG |
SCN1A |
ENSG00000144285 |
0.05292447243132084 |
[460] |
[716,445,565,446] |
1 |
hSpCas9 |
negative selection |
7387831 |
166048932 |
166048955 |
2 |
- |
27260156 |
MHHES1 |
viability |
AACAGGATATCATTATTTCCTGG |
SCN1A |
ENSG00000144285 |
-0.21065694456922984 |
[628] |
[670,660,411,683] |
-4 |
hSpCas9 |
negative selection |
7452083 |
166054653 |
166054676 |
2 |
+ |
27260156 |
MHHES1 |
viability |
GTGAAATCGAGCCAGTTCCATGG |
SCN1A |
ENSG00000144285 |
-0.520597121285846 |
[223] |
[120,229,215,139] |
-7 |
hSpCas9 |
negative selection |
7452084 |
166054712 |
166054735 |
2 |
- |
27260156 |
MHHES1 |
viability |
CACTTATAAAAATTATTGCAAGG |
SCN1A |
ENSG00000144285 |
0.30116452005076505 |
[330] |
[392,478,520,433] |
5 |
hSpCas9 |
negative selection |
7452085 |
166048914 |
166048937 |
2 |
+ |
27260156 |
MEWO |
viability |
GTGCATCTAAAAAACCCTCCAGG |
SCN1A |
ENSG00000144285 |
0.5672196897793831 |
[23] |
[54,34,13] |
9 |
hSpCas9 |
negative selection |
7509080 |
166051889 |
166051912 |
2 |
- |
27260156 |
MEWO |
viability |
CTGAGCGTATTTGCTCTAATTGG |
SCN1A |
ENSG00000144285 |
-0.1438822384963669 |
[370] |
[428,236,298] |
-3 |
hSpCas9 |
negative selection |
7509081 |
166051971 |
166051994 |
2 |
- |
27260156 |
MEWO |
viability |
TTCAGGCCTGAAAACCATTGTGG |
SCN1A |
ENSG00000144285 |
0.04270697444659006 |
[460] |
[584,428,345] |
1 |
hSpCas9 |
negative selection |
7509082 |
166048932 |
166048955 |
2 |
- |
27260156 |
MEWO |
viability |
AACAGGATATCATTATTTCCTGG |
SCN1A |
ENSG00000144285 |
-0.4020417861819899 |
[628] |
[509,334,503] |
-7 |
hSpCas9 |
negative selection |
7573334 |
166054653 |
166054676 |
2 |
+ |
27260156 |
MEWO |
viability |
GTGAAATCGAGCCAGTTCCATGG |
SCN1A |
ENSG00000144285 |
-0.25847390440097917 |
[223] |
[171,157,194] |
-5 |
hSpCas9 |
negative selection |
7573335 |
166054712 |
166054735 |
2 |
- |
27260156 |
MEWO |
viability |
CACTTATAAAAATTATTGCAAGG |
SCN1A |
ENSG00000144285 |
-0.06430083050893953 |
[330] |
[350,310,236] |
-1 |
hSpCas9 |
negative selection |
7573336 |
166048914 |
166048937 |
2 |
+ |
27260156 |
LNCAPCLONEFGC |
viability |
GTGCATCTAAAAAACCCTCCAGG |
SCN1A |
ENSG00000144285 |
-0.005330814191129463 |
[23] |
[10,43,25,4] |
0 |
hSpCas9 |
negative selection |
7630331 |
166051889 |
166051912 |
2 |
- |
27260156 |
LNCAPCLONEFGC |
viability |
CTGAGCGTATTTGCTCTAATTGG |
SCN1A |
ENSG00000144285 |
0.5171442080487979 |
[370] |
[384,415,745,421] |
7 |
hSpCas9 |
negative selection |
7630332 |
166051971 |
166051994 |
2 |
- |
27260156 |
LNCAPCLONEFGC |
viability |
TTCAGGCCTGAAAACCATTGTGG |
SCN1A |
ENSG00000144285 |
0.0964194221651276 |
[460] |
[438,484,458,401] |
1 |
hSpCas9 |
negative selection |
7630333 |
166048932 |
166048955 |
2 |
- |
27260156 |
LNCAPCLONEFGC |
viability |
AACAGGATATCATTATTTCCTGG |
SCN1A |
ENSG00000144285 |
-0.05492414430100484 |
[628] |
[394,501,799,539] |
-1 |
hSpCas9 |
negative selection |
7694585 |
166054653 |
166054676 |
2 |
+ |
27260156 |
LNCAPCLONEFGC |
viability |
GTGAAATCGAGCCAGTTCCATGG |
SCN1A |
ENSG00000144285 |
0.17094922908483468 |
[223] |
[196,232,282,208] |
2 |
hSpCas9 |
negative selection |
7694586 |
166054712 |
166054735 |
2 |
- |
27260156 |
LNCAPCLONEFGC |
viability |
CACTTATAAAAATTATTGCAAGG |
SCN1A |
ENSG00000144285 |
0.049869072364919054 |
[330] |
[319,309,342,272] |
0 |
hSpCas9 |
negative selection |
7694587 |
166048914 |
166048937 |
2 |
+ |
27260156 |
PANC0327 |
viability |
GTGCATCTAAAAAACCCTCCAGG |
SCN1A |
ENSG00000144285 |
0.7352612839132173 |
[23] |
[30,70,25,8] |
9 |
hSpCas9 |
negative selection |
7751582 |
166051889 |
166051912 |
2 |
- |
27260156 |
PANC0327 |
viability |
CTGAGCGTATTTGCTCTAATTGG |
SCN1A |
ENSG00000144285 |
0.6255473003824541 |
[370] |
[574,363,646,471] |
8 |
hSpCas9 |
negative selection |
7751583 |
166051971 |
166051994 |
2 |
- |
27260156 |
PANC0327 |
viability |
TTCAGGCCTGAAAACCATTGTGG |
SCN1A |
ENSG00000144285 |
0.10266726247648267 |
[460] |
[573,229,552,439] |
1 |
hSpCas9 |
negative selection |
7751584 |
166048932 |
166048955 |
2 |
- |
27260156 |
PANC0327 |
viability |
AACAGGATATCATTATTTCCTGG |
SCN1A |
ENSG00000144285 |
-0.09337873297164212 |
[628] |
[674,518,586,326] |
-1 |
hSpCas9 |
negative selection |
7815836 |
166054653 |
166054676 |
2 |
+ |
27260156 |
PANC0327 |
viability |
GTGAAATCGAGCCAGTTCCATGG |
SCN1A |
ENSG00000144285 |
0.10885138892154345 |
[223] |
[146,209,112,382] |
1 |
hSpCas9 |
negative selection |
7815837 |
166054712 |
166054735 |
2 |
- |
27260156 |
PANC0327 |
viability |
CACTTATAAAAATTATTGCAAGG |
SCN1A |
ENSG00000144285 |
-0.09339409506392582 |
[330] |
[204,280,365,243] |
-1 |
hSpCas9 |
negative selection |
7815838 |
166048914 |
166048937 |
2 |
+ |
27260156 |
NCIH2009 |
viability |
GTGCATCTAAAAAACCCTCCAGG |
SCN1A |
ENSG00000144285 |
1.1449449670228682 |
[23] |
[139,37,57] |
9 |
hSpCas9 |
negative selection |
7872833 |
166051889 |
166051912 |
2 |
- |
27260156 |
NCIH2009 |
viability |
CTGAGCGTATTTGCTCTAATTGG |
SCN1A |
ENSG00000144285 |
0.414347832807067 |
[370] |
[619,647,789] |
6 |
hSpCas9 |
negative selection |
7872834 |
166051971 |
166051994 |
2 |
- |
27260156 |
NCIH2009 |
viability |
TTCAGGCCTGAAAACCATTGTGG |
SCN1A |
ENSG00000144285 |
-0.04548665791179922 |
[460] |
[762,551,584] |
0 |
hSpCas9 |
negative selection |
7872835 |
166048932 |
166048955 |
2 |
- |
27260156 |
NCIH2009 |
viability |
AACAGGATATCATTATTTCCTGG |
SCN1A |
ENSG00000144285 |
-0.3445072690095715 |
[628] |
[874,546,691] |
-4 |
hSpCas9 |
negative selection |
7937087 |
166054653 |
166054676 |
2 |
+ |
27260156 |
NCIH2009 |
viability |
GTGAAATCGAGCCAGTTCCATGG |
SCN1A |
ENSG00000144285 |
-0.15286026173117406 |
[223] |
[459,187,232] |
-2 |
hSpCas9 |
negative selection |
7937088 |
166054712 |
166054735 |
2 |
- |
27260156 |
NCIH2009 |
viability |
CACTTATAAAAATTATTGCAAGG |
SCN1A |
ENSG00000144285 |
0.45956918575247263 |
[330] |
[561,587,742] |
6 |
hSpCas9 |
negative selection |
7937089 |
166048914 |
166048937 |
2 |
+ |
27260156 |
NCIH1373 |
viability |
GTGCATCTAAAAAACCCTCCAGG |
SCN1A |
ENSG00000144285 |
0.5616149402169435 |
[23] |
[70,8,79,0] |
5 |
hSpCas9 |
negative selection |
7994084 |
166051889 |
166051912 |
2 |
- |
27260156 |
NCIH1373 |
viability |
CTGAGCGTATTTGCTCTAATTGG |
SCN1A |
ENSG00000144285 |
0.9702711774828561 |
[370] |
[1651,647,460,167] |
8 |
hSpCas9 |
negative selection |
7994085 |
166051971 |
166051994 |
2 |
- |
27260156 |
NCIH1373 |
viability |
TTCAGGCCTGAAAACCATTGTGG |
SCN1A |
ENSG00000144285 |
-0.15421229127620542 |
[460] |
[455,320,571,136] |
-1 |
hSpCas9 |
negative selection |
7994086 |
166048932 |
166048955 |
2 |
- |
27260156 |
NCIH1373 |
viability |
AACAGGATATCATTATTTCCTGG |
SCN1A |
ENSG00000144285 |
0.32757564920742094 |
[628] |
[878,805,817,275] |
3 |
hSpCas9 |
negative selection |
8058338 |
166054653 |
166054676 |
2 |
+ |
27260156 |
NCIH1373 |
viability |
GTGAAATCGAGCCAGTTCCATGG |
SCN1A |
ENSG00000144285 |
-0.5020144643684625 |
[223] |
[174,154,165,56] |
-5 |
hSpCas9 |
negative selection |
8058339 |
166054712 |
166054735 |
2 |
- |
27260156 |
NCIH1373 |
viability |
CACTTATAAAAATTATTGCAAGG |
SCN1A |
ENSG00000144285 |
0.6917731491645167 |
[330] |
[994,570,437,117] |
7 |
hSpCas9 |
negative selection |
8058340 |
166048914 |
166048937 |
2 |
+ |
27260156 |
PATU8902 |
viability |
GTGCATCTAAAAAACCCTCCAGG |
SCN1A |
ENSG00000144285 |
-0.19538993632835577 |
[23] |
[16,74,1,29] |
-2 |
hSpCas9 |
negative selection |
8115335 |
166051889 |
166051912 |
2 |
- |
27260156 |
PATU8902 |
viability |
CTGAGCGTATTTGCTCTAATTGG |
SCN1A |
ENSG00000144285 |
0.7672088802910901 |
[370] |
[890,718,1050,793] |
7 |
hSpCas9 |
negative selection |
8115336 |
166051971 |
166051994 |
2 |
- |
27260156 |
PATU8902 |
viability |
TTCAGGCCTGAAAACCATTGTGG |
SCN1A |
ENSG00000144285 |
-0.37326534073729145 |
[460] |
[406,456,364,823] |
-4 |
hSpCas9 |
negative selection |
8115337 |
166048932 |
166048955 |
2 |
- |
27260156 |
PATU8902 |
viability |
AACAGGATATCATTATTTCCTGG |
SCN1A |
ENSG00000144285 |
-0.04229504795546618 |
[628] |
[1136,735,678,888] |
0 |
hSpCas9 |
negative selection |
8179589 |
166054653 |
166054676 |
2 |
+ |
27260156 |
PATU8902 |
viability |
GTGAAATCGAGCCAGTTCCATGG |
SCN1A |
ENSG00000144285 |
-0.07422254258289507 |
[223] |
[572,214,74,383] |
0 |
hSpCas9 |
negative selection |
8179590 |
166054712 |
166054735 |
2 |
- |
27260156 |
PATU8902 |
viability |
CACTTATAAAAATTATTGCAAGG |
SCN1A |
ENSG00000144285 |
0.4427460204289385 |
[330] |
[588,456,307,1311] |
4 |
hSpCas9 |
negative selection |
8179591 |
166048914 |
166048937 |
2 |
+ |
27260156 |
PANC1 |
viability |
GTGCATCTAAAAAACCCTCCAGG |
SCN1A |
ENSG00000144285 |
-0.35531376408739845 |
[23] |
[7,24,28,5] |
-5 |
hSpCas9 |
negative selection |
8236586 |
166051889 |
166051912 |
2 |
- |
27260156 |
PANC1 |
viability |
CTGAGCGTATTTGCTCTAATTGG |
SCN1A |
ENSG00000144285 |
0.32867855601897006 |
[370] |
[351,430,361,447] |
5 |
hSpCas9 |
negative selection |
8236587 |
166051971 |
166051994 |
2 |
- |
27260156 |
PANC1 |
viability |
TTCAGGCCTGAAAACCATTGTGG |
SCN1A |
ENSG00000144285 |
0.23175146216883702 |
[460] |
[408,325,711,391] |
3 |
hSpCas9 |
negative selection |
8236588 |
166048932 |
166048955 |
2 |
- |
27260156 |
PANC1 |
viability |
AACAGGATATCATTATTTCCTGG |
SCN1A |
ENSG00000144285 |
-0.09492047292658018 |
[628] |
[651,583,403,403] |
-1 |
hSpCas9 |
negative selection |
8300840 |
166054653 |
166054676 |
2 |
+ |
27260156 |
PANC1 |
viability |
GTGAAATCGAGCCAGTTCCATGG |
SCN1A |
ENSG00000144285 |
0.3104886765058186 |
[223] |
[281,196,191,264] |
5 |
hSpCas9 |
negative selection |
8300841 |
166054712 |
166054735 |
2 |
- |
27260156 |
PANC1 |
viability |
CACTTATAAAAATTATTGCAAGG |
SCN1A |
ENSG00000144285 |
0.2647189297876793 |
[330] |
[355,404,437,198] |
4 |
hSpCas9 |
negative selection |
8300842 |
166048914 |
166048937 |
2 |
+ |
27260156 |
PANC0813 |
viability |
GTGCATCTAAAAAACCCTCCAGG |
SCN1A |
ENSG00000144285 |
-0.021526169021997887 |
[23] |
[41,21,31,16] |
0 |
hSpCas9 |
negative selection |
8357837 |
166051889 |
166051912 |
2 |
- |
27260156 |
PANC0813 |
viability |
CTGAGCGTATTTGCTCTAATTGG |
SCN1A |
ENSG00000144285 |
0.11261412695617987 |
[370] |
[468,618,376,420] |
1 |
hSpCas9 |
negative selection |
8357838 |
166051971 |
166051994 |
2 |
- |
27260156 |
PANC0813 |
viability |
TTCAGGCCTGAAAACCATTGTGG |
SCN1A |
ENSG00000144285 |
0.11132225988310637 |
[460] |
[503,527,817,487] |
1 |
hSpCas9 |
negative selection |
8357839 |
166048932 |
166048955 |
2 |
- |
27260156 |
PANC0813 |
viability |
AACAGGATATCATTATTTCCTGG |
SCN1A |
ENSG00000144285 |
-0.18206932664263004 |
[628] |
[713,643,797,464] |
-3 |
hSpCas9 |
negative selection |
8422091 |
166054653 |
166054676 |
2 |
+ |
27260156 |
PANC0813 |
viability |
GTGAAATCGAGCCAGTTCCATGG |
SCN1A |
ENSG00000144285 |
0.06354797608551976 |
[223] |
[199,334,359,201] |
1 |
hSpCas9 |
negative selection |
8422092 |