Crispr

Gene Info

  • Species:Human (Homo sapiens)
  • GeneID:22885
  • Symbol:ABLIM3
  • Description:actin binding LIM protein family member 3
DataSource: http://genomecrispr.dkfz.de/#!/results/ABLIM3

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Start The end chr strand pubmed cellline condition sequence symbol ensg log2fc rc_initial rc_final effect cas screentype index
149142094 149142117 - 24336571 A375 resistance to PLX after 7 days CCACTTACTGCTAGTGTTCATGG ABLIM3 ENSG00000173210 -0.14894563610741773 [35,26] [29,26] -5 hSpCas9 positive selection 3130957
149142094 149142117 - 24336571 A375 resistance to PLX after 14 days CCACTTACTGCTAGTGTTCATGG ABLIM3 ENSG00000173210 0.13941609456945536 [28,32] [14,16] 1 hSpCas9 positive selection 3188750
149142094 149142117 - 24336571 A375 viability after 7 days CCACTTACTGCTAGTGTTCATGG ABLIM3 ENSG00000173210 0.8148461305856666 [18] [35,26] 9 hSpCas9 negative selection 3246543
149142094 149142117 - 24336571 A375 viability after 14 days CCACTTACTGCTAGTGTTCATGG ABLIM3 ENSG00000173210 0.8123929610916417 [18] [28,32] 8 hSpCas9 negative selection 3304336
149142094 149142117 5 - 27383988 293T resistance to West Nile virus (flavivirus) CCACTTACTGCTAGTGTTCATGG ABLIM3 ENSG00000173210 8.287639899629081 [297,355] [0,1333] 9 hSpCas9 positive selection 3335135
149142094 149142117 5 - 26780180 A375 viability CCACTTACTGCTAGTGTTCATGG ABLIM3 ENSG00000173210 0.793004691843811 [] [] 3 hSpCas9 negative selection 3910266
149142094 149142117 5 - 26780180 HT29 viability (GeCKOv2 library) CCACTTACTGCTAGTGTTCATGG ABLIM3 ENSG00000173210 0.142664445093012 [] [] 0 hSpCas9 negative selection 4018232
149142094 149142117 5 - 26780180 A375 resistance to vemurafenib (GeCKOv1 lentiCRISPRv1) CCACTTACTGCTAGTGTTCATGG ABLIM3 ENSG00000173210 0.38509785942559316 [4] [3,3] 8 hSpCas9 positive selection 4155632
149142094 149142117 5 - 26780180 A375 resistance to vemurafenib (GeCKOv1 lentiGuide) CCACTTACTGCTAGTGTTCATGG ABLIM3 ENSG00000173210 0.8024077454027002 [4] [3,3,1,3] 5 hSpCas9 positive selection 4219654
149142094 149142117 5 - 26780180 A375 resistance to vemurafenib (GeCKOv2 lentiGuide) CCACTTACTGCTAGTGTTCATGG ABLIM3 ENSG00000173210 0.44707375303289854 [3] [4,3] 8 hSpCas9 positive selection 4254020
149141919 149141942 5 + 27661255 K562 viability GGCTACAGCCCAGACAGAGAGGG ABLIM3 ENSG00000173210 0.21425780598941224 [262,224] [290,171] 7 dCas9-KRAB negative selection 5460311
149141519 149141542 5 - 27661255 K562 viability GGAGCTCGACATCCATGATGCGG ABLIM3 ENSG00000173210 -0.34551508400401154 [367,384] [249,224] -7 dCas9-KRAB negative selection 5460312
149141540 149141563 5 - 27661255 K562 viability GGGCTAGCAATGCGAAATAGGGG ABLIM3 ENSG00000173210 0.0070119615028294 [614,538] [541,397] 0 dCas9-KRAB negative selection 5460313
149141560 149141583 5 - 27661255 K562 viability GTCTGGGGTCTCGAATTCCAGGG ABLIM3 ENSG00000173210 0.16968457945378068 [1594,2008] [1836,1420] 6 dCas9-KRAB negative selection 5460314
149142094 149142117 5 - 27260156 BXPC3 viability CCACTTACTGCTAGTGTTCATGG ABLIM3 ENSG00000173210 0.2782707883457677 [797] [849,1010,1008,1212] 6 hSpCas9 negative selection 5526480
149142094 149142117 5 - 27260156 A673 viability CCACTTACTGCTAGTGTTCATGG ABLIM3 ENSG00000173210 0.2711156087878065 [797] [1268,1000,1188,1181] 6 hSpCas9 negative selection 5647731
149142094 149142117 5 - 27260156 A375 viability CCACTTACTGCTAGTGTTCATGG ABLIM3 ENSG00000173210 0.23155031218177569 [797] [941,1219,1027,1187] 3 hSpCas9 negative selection 5768982
149142094 149142117 5 - 27260156 COLO741 viability CCACTTACTGCTAGTGTTCATGG ABLIM3 ENSG00000173210 0.1400239325159598 [797] [1132,1183,1056] 3 hSpCas9 negative selection 5890233
149142094 149142117 5 - 27260156 CAL120 viability CCACTTACTGCTAGTGTTCATGG ABLIM3 ENSG00000173210 0.5806674570119567 [797] [2037,1300,1203] 8 hSpCas9 negative selection 6011484
149142094 149142117 5 - 27260156 CADOES1 viability CCACTTACTGCTAGTGTTCATGG ABLIM3 ENSG00000173210 0.43411444930776744 [797] [1047,908,1195,851] 7 hSpCas9 negative selection 6132735
149142094 149142117 5 - 27260156 EWS502 viability CCACTTACTGCTAGTGTTCATGG ABLIM3 ENSG00000173210 0.27699423021973246 [797] [791,1127,781,1440] 5 hSpCas9 negative selection 6253986
149142094 149142117 5 - 27260156 EW8 viability CCACTTACTGCTAGTGTTCATGG ABLIM3 ENSG00000173210 0.39917871634354773 [797] [1115,708,885,720] 7 hSpCas9 negative selection 6375237
149142094 149142117 5 - 27260156 CORL105 viability CCACTTACTGCTAGTGTTCATGG ABLIM3 ENSG00000173210 0.4332958327327229 [797] [1511,1032,1438,1102] 7 hSpCas9 negative selection 6496488
149142094 149142117 5 - 27260156 HS294T viability CCACTTACTGCTAGTGTTCATGG ABLIM3 ENSG00000173210 0.28825549134134676 [797] [374,330,377,432] 4 hSpCas9 negative selection 6617739
149142094 149142117 5 - 27260156 HCC44 viability CCACTTACTGCTAGTGTTCATGG ABLIM3 ENSG00000173210 0.3410371760270413 [797] [1203,1148,1401,866] 5 hSpCas9 negative selection 6738990
149142094 149142117 5 - 27260156 G402 viability CCACTTACTGCTAGTGTTCATGG ABLIM3 ENSG00000173210 0.32782278052807967 [797] [1141,1047,1002,1647] 4 hSpCas9 negative selection 6860241
149142094 149142117 5 - 27260156 L33 viability CCACTTACTGCTAGTGTTCATGG ABLIM3 ENSG00000173210 0.29843943521330074 [797] [988,356,687,970] 6 hSpCas9 negative selection 6981492
149142094 149142117 5 - 27260156 K562 viability CCACTTACTGCTAGTGTTCATGG ABLIM3 ENSG00000173210 0.23406826196655917 [797] [585,791,1172,762] 3 hSpCas9 negative selection 7102743
149142094 149142117 5 - 27260156 HT29 viability CCACTTACTGCTAGTGTTCATGG ABLIM3 ENSG00000173210 0.40686710041838314 [797] [1475,1465,1106,1134] 7 hSpCas9 negative selection 7223994
149142094 149142117 5 - 27260156 MHHES1 viability CCACTTACTGCTAGTGTTCATGG ABLIM3 ENSG00000173210 0.2251399367267185 [797] [1368,988,1005,884] 4 hSpCas9 negative selection 7345245
149142094 149142117 5 - 27260156 MEWO viability CCACTTACTGCTAGTGTTCATGG ABLIM3 ENSG00000173210 0.3403783966135979 [797] [993,727,1123] 7 hSpCas9 negative selection 7466496
149142094 149142117 5 - 27260156 LNCAPCLONEFGC viability CCACTTACTGCTAGTGTTCATGG ABLIM3 ENSG00000173210 0.5020657386515547 [797] [1081,1039,1251,751] 7 hSpCas9 negative selection 7587747
149142094 149142117 5 - 27260156 PANC0327 viability CCACTTACTGCTAGTGTTCATGG ABLIM3 ENSG00000173210 0.633728129342029 [797] [1114,636,1198,1508] 8 hSpCas9 negative selection 7708998
149142094 149142117 5 - 27260156 NCIH2009 viability CCACTTACTGCTAGTGTTCATGG ABLIM3 ENSG00000173210 0.3568608924289344 [797] [1850,1134,1383] 5 hSpCas9 negative selection 7830249
149142094 149142117 5 - 27260156 NCIH1373 viability CCACTTACTGCTAGTGTTCATGG ABLIM3 ENSG00000173210 0.4357246236163631 [797] [989,1273,1370,301] 4 hSpCas9 negative selection 7951500
149142094 149142117 5 - 27260156 PATU8902 viability CCACTTACTGCTAGTGTTCATGG ABLIM3 ENSG00000173210 0.5314011442582277 [797] [1729,1498,1988,1022] 5 hSpCas9 negative selection 8072751
149142094 149142117 5 - 27260156 PANC1 viability CCACTTACTGCTAGTGTTCATGG ABLIM3 ENSG00000173210 0.30088554081585206 [797] [695,924,1085,701] 5 hSpCas9 negative selection 8194002
149142094 149142117 5 - 27260156 PANC0813 viability CCACTTACTGCTAGTGTTCATGG ABLIM3 ENSG00000173210 0.4696009625968375 [797] [1274,1462,1238,1214] 7 hSpCas9 negative selection 8315253
149142094 149142117 5 - 27260156 RDES viability CCACTTACTGCTAGTGTTCATGG ABLIM3 ENSG00000173210 0.4750981149420227 [797] [1060,938,1599,1606] 7 hSpCas9 negative selection 8436504
149142094 149142117 5 - 27260156 PC3 viability CCACTTACTGCTAGTGTTCATGG ABLIM3 ENSG00000173210 0.27322486206906993 [797] [585,1059,1582,922] 6 hSpCas9 negative selection 8557755
149142094 149142117 5 - 27260156 PATU8988T viability CCACTTACTGCTAGTGTTCATGG ABLIM3 ENSG00000173210 0.27303094882198786 [797] [914,1326,697,817] 5 hSpCas9 negative selection 8679006
149142094 149142117 5 - 27260156 T47D viability CCACTTACTGCTAGTGTTCATGG ABLIM3 ENSG00000173210 0.15674074711492147 [797] [1100,906,1078,1069] 3 hSpCas9 negative selection 8800257
149142094 149142117 5 - 27260156 SU8686 viability CCACTTACTGCTAGTGTTCATGG ABLIM3 ENSG00000173210 0.49413134734011954 [797] [932,1038,1161,1391] 8 hSpCas9 negative selection 8921508
149142094 149142117 5 - 27260156 SKES1 viability CCACTTACTGCTAGTGTTCATGG ABLIM3 ENSG00000173210 0.30566900451616996 [797] [1240,1215,891,677] 6 hSpCas9 negative selection 9042759
149142094 149142117 5 - 27260156 TOV112D viability CCACTTACTGCTAGTGTTCATGG ABLIM3 ENSG00000173210 0.09527849445770531 [797] [861,793,970,774] 1 hSpCas9 negative selection 9164010
149142094 149142117 5 - 27260156 TC71 viability CCACTTACTGCTAGTGTTCATGG ABLIM3 ENSG00000173210 0.23246778144707492 [797] [981,1028,937,1077] 6 hSpCas9 negative selection 9285261
149142094 149142117 5 - 27260156 TC32 viability CCACTTACTGCTAGTGTTCATGG ABLIM3 ENSG00000173210 0.4414731943981872 [797] [1022,737,1371,1047] 7 hSpCas9 negative selection 9406512