Crispr

Gene Info

  • Species:Human (Homo sapiens)
  • GeneID:3975
  • Symbol:LHX1
  • Description:LIM homeobox 1
DataSource: http://genomecrispr.dkfz.de/#!/results/LHX1

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Start The end chr strand pubmed cellline condition sequence symbol ensg log2fc rc_initial rc_final effect cas screentype index
36940026 36940049 CHR_HSCHR17_7_CTG4 - 26472758 Jiyoye viability GCAGCCGGCACAGTGAACCATGG LHX1 ENSG00000274577 0.24081699508375332 [302] [269] 1 hSpCas9 negative selection 90369
36938196 36938219 17 - 26472758 Jiyoye viability GCAGCCGGCACAGTGAACCATGG LHX1 ENSG00000273706 0.24081699508375332 [302] [269] 1 hSpCas9 negative selection 90370
36940026 36940049 CHR_HSCHR17_7_CTG4 - 26472758 KBM7 viability GCAGCCGGCACAGTGAACCATGG LHX1 ENSG00000274577 0.8218288701837797 [1429,886] [1218,698] 8 hSpCas9 negative selection 281487
36938196 36938219 17 - 26472758 KBM7 viability GCAGCCGGCACAGTGAACCATGG LHX1 ENSG00000273706 0.8218288701837797 [1429,886] [1218,698] 8 hSpCas9 negative selection 281488
36940026 36940049 CHR_HSCHR17_7_CTG4 - 26472758 Raji viability GCAGCCGGCACAGTGAACCATGG LHX1 ENSG00000274577 0.6608045188083653 [446] [163] 6 hSpCas9 negative selection 472605
36938196 36938219 17 - 26472758 Raji viability GCAGCCGGCACAGTGAACCATGG LHX1 ENSG00000273706 0.6608045188083653 [446] [163] 6 hSpCas9 negative selection 472606
36940026 36940049 CHR_HSCHR17_7_CTG4 - 26472758 K562 viability GCAGCCGGCACAGTGAACCATGG LHX1 ENSG00000274577 0.39737065050504583 [911] [1013] 3 hSpCas9 negative selection 663723
36938196 36938219 17 - 26472758 K562 viability GCAGCCGGCACAGTGAACCATGG LHX1 ENSG00000273706 0.39737065050504583 [911] [1013] 3 hSpCas9 negative selection 663724
36938241 36938264 17 + 26627737 DLD1 viability TTCTCTTGAACGTGCTGGACAGG LHX1 ENSG00000273706 0.0626887276778269 [356] [38,137,165] 0 hSpCas9 negative selection 797192
36938241 36938264 17 + 26627737 GBM cells viability after 5 days TTCTCTTGAACGTGCTGGACAGG LHX1 ENSG00000273706 -0.4847332052456116 [196] [73,76] -6 hSpCas9 negative selection 879507
36938241 36938264 17 + 26627737 GBM cells viability after 13 days TTCTCTTGAACGTGCTGGACAGG LHX1 ENSG00000273706 -0.3000567156998223 [196] [61,106] -4 hSpCas9 negative selection 961822
36938241 36938264 17 + 26627737 GBM cells viability after 21 days TTCTCTTGAACGTGCTGGACAGG LHX1 ENSG00000273706 0.4108606784550515 [196] [158,126] 4 hSpCas9 negative selection 1044137
36938241 36938264 17 + 26627737 RPE1 viability after 9 days TTCTCTTGAACGTGCTGGACAGG LHX1 ENSG00000273706 0.7817462947790972 [400] [193,243] 5 hSpCas9 negative selection 1126452
36938241 36938264 17 + 26627737 RPE1 viability after 12 days TTCTCTTGAACGTGCTGGACAGG LHX1 ENSG00000273706 1.2986570729192546 [400] [197,335] 7 hSpCas9 negative selection 1208767
36938241 36938264 17 + 26627737 RPE1 viability after 15 days TTCTCTTGAACGTGCTGGACAGG LHX1 ENSG00000273706 1.489368271275861 [400] [234,398] 7 hSpCas9 negative selection 1291082
36938241 36938264 17 + 26627737 RPE1 viability after 18 days TTCTCTTGAACGTGCTGGACAGG LHX1 ENSG00000273706 1.4030132443497445 [400] [276,295] 7 hSpCas9 negative selection 1373397
36938241 36938264 17 + 26627737 HeLa viability after 8 days TTCTCTTGAACGTGCTGGACAGG LHX1 ENSG00000273706 0.8318920711102247 [184] [109,175,136] 6 hSpCas9 negative selection 1455712
36938241 36938264 17 + 26627737 HeLa viability after 12 days TTCTCTTGAACGTGCTGGACAGG LHX1 ENSG00000273706 0.8902220343576723 [184] [167,149,106] 7 hSpCas9 negative selection 1538027
36938241 36938264 17 + 26627737 HeLa viability after 15 days TTCTCTTGAACGTGCTGGACAGG LHX1 ENSG00000273706 1.2825031666577107 [184] [206,162,178] 8 hSpCas9 negative selection 1620342
36938241 36938264 17 + 26627737 HeLa viability after 18 days TTCTCTTGAACGTGCTGGACAGG LHX1 ENSG00000273706 1.3095146319892177 [184] [143,136,178] 8 hSpCas9 negative selection 1702657
36938241 36938264 17 + 26627737 HCT116 viability after 6 days TTCTCTTGAACGTGCTGGACAGG LHX1 ENSG00000273706 -0.4420164416708352 [349] [93,10] -3 hSpCas9 negative selection 1784972
36938241 36938264 17 + 26627737 HCT116 viability after 8 days TTCTCTTGAACGTGCTGGACAGG LHX1 ENSG00000273706 0.6730961991531379 [103] [102,134,36] 6 hSpCas9 negative selection 1867287
36938241 36938264 17 + 26627737 HCT116 viability after 9 days TTCTCTTGAACGTGCTGGACAGG LHX1 ENSG00000273706 -0.0151911598330019 [349] [168,31] 0 hSpCas9 negative selection 1949602
36938241 36938264 17 + 26627737 HCT116 viability after 12 days TTCTCTTGAACGTGCTGGACAGG LHX1 ENSG00000273706 1.291187824902034 [103] [165,156,75] 8 hSpCas9 negative selection 2031917
36938241 36938264 17 + 26627737 HCT116 viability after 15 days TTCTCTTGAACGTGCTGGACAGG LHX1 ENSG00000273706 1.0004009974341082 [103] [180,69,114] 8 hSpCas9 negative selection 2114232
36938241 36938264 17 + 26627737 HCT116 viability after 18 days TTCTCTTGAACGTGCTGGACAGG LHX1 ENSG00000273706 0.7614980187845533 [103] [72,121,56] 6 hSpCas9 negative selection 2196547
36938192 36938215 17 + 24336569 HL60 viability AAGACCATGGTTCACTGTGCCGG LHX1 ENSG00000273706 -0.08534753511612453 [371] [741] 0 hSpCas9 negative selection 2274631
36938225 36938248 17 - 24336569 HL60 viability AAGAGAAAGCGGTCCAGGATGGG LHX1 ENSG00000273706 -0.26357851107912267 [935] [1649] -2 hSpCas9 negative selection 2274632
36938230 36938253 17 - 24336569 HL60 viability CGTTCAAGAGAAAGCGGTCCAGG LHX1 ENSG00000273706 -0.019454438353471826 [295] [617] 0 hSpCas9 negative selection 2274633
36938236 36938259 17 + 24336569 HL60 viability CCGCTTTCTCTTGAACGTGCTGG LHX1 ENSG00000273706 0.4540686908365081 [286] [831] 4 hSpCas9 negative selection 2274634
36938241 36938264 17 + 24336569 HL60 viability TTCTCTTGAACGTGCTGGACAGG LHX1 ENSG00000273706 -0.05738996565003873 [831] [1691] 0 hSpCas9 negative selection 2274635
36938247 36938270 17 + 24336569 HL60 viability TGAACGTGCTGGACAGGGCCTGG LHX1 ENSG00000273706 -0.279021118972574 [1386] [2418] -2 hSpCas9 negative selection 2274636
36938265 36938288 17 - 24336569 HL60 viability CTGGACGCACTTGACGTGCCAGG LHX1 ENSG00000273706 0.4315051864982721 [314] [898] 4 hSpCas9 negative selection 2274637
36938284 36938307 17 - 24336569 HL60 viability TGCATTTACATTCACAGCACTGG LHX1 ENSG00000273706 -0.8162748100914285 [445] [535] -6 hSpCas9 negative selection 2274638
36938308 36938331 17 - 24336569 HL60 viability TGGAGAAGCACTTCTCGGTCAGG LHX1 ENSG00000273706 0.7151288524455646 [345] [1201] 6 hSpCas9 negative selection 2274639
36938313 36938336 17 - 24336569 HL60 viability TTCCCTGGAGAAGCACTTCTCGG LHX1 ENSG00000273706 0.25008556038947616 [268] [676] 2 hSpCas9 negative selection 2274640
36938192 36938215 17 + 24336569 KBM7 viability AAGACCATGGTTCACTGTGCCGG LHX1 ENSG00000273706 0.4431286581671814 [513] [1905] 4 hSpCas9 negative selection 2341808
36938225 36938248 17 - 24336569 KBM7 viability AAGAGAAAGCGGTCCAGGATGGG LHX1 ENSG00000273706 -0.37835116142442754 [650] [1365] -3 hSpCas9 negative selection 2341809
36938230 36938253 17 - 24336569 KBM7 viability CGTTCAAGAGAAAGCGGTCCAGG LHX1 ENSG00000273706 0.937251468167855 [183] [960] 7 hSpCas9 negative selection 2341810
36938236 36938259 17 + 24336569 KBM7 viability CCGCTTTCTCTTGAACGTGCTGG LHX1 ENSG00000273706 -0.2047949863812567 [280] [664] -2 hSpCas9 negative selection 2341811
36938241 36938264 17 + 24336569 KBM7 viability TTCTCTTGAACGTGCTGGACAGG LHX1 ENSG00000273706 0.5867855063796846 [642] [2633] 5 hSpCas9 negative selection 2341812
36938247 36938270 17 + 24336569 KBM7 viability TGAACGTGCTGGACAGGGCCTGG LHX1 ENSG00000273706 0.6090666301776272 [667] [2778] 5 hSpCas9 negative selection 2341813
36938265 36938288 17 - 24336569 KBM7 viability CTGGACGCACTTGACGTGCCAGG LHX1 ENSG00000273706 0.6792355648053343 [350] [1532] 6 hSpCas9 negative selection 2341814
36938284 36938307 17 - 24336569 KBM7 viability TGCATTTACATTCACAGCACTGG LHX1 ENSG00000273706 -0.379099458666116 [287] [603] -3 hSpCas9 negative selection 2341815
36938308 36938331 17 - 24336569 KBM7 viability TGGAGAAGCACTTCTCGGTCAGG LHX1 ENSG00000273706 0.3997694534052305 [370] [1334] 3 hSpCas9 negative selection 2341816
36938313 36938336 17 - 24336569 KBM7 viability TTCCCTGGAGAAGCACTTCTCGG LHX1 ENSG00000273706 -0.801783694460001 [564] [883] -6 hSpCas9 negative selection 2341817
36939190 36939213 CHR_HSCHR17_7_CTG4 + 25494202 A375 resistance to PLX-4720 (puromycin) AGGGAAGGAGCGAGTGCGCCTGG LHX1 ENSG00000274577 4.058911249664017 [70,6] [29,260] 9 dCas9-VP64 positive selection 2438291
36937360 36937383 17 + 25494202 A375 resistance to PLX-4720 (puromycin) AGGGAAGGAGCGAGTGCGCCTGG LHX1 ENSG00000273706 4.058911249664017 [70,6] [29,260] 9 dCas9-VP64 positive selection 2438292
36937313 36937336 17 + 25494202 A375 resistance to PLX-4720 (puromycin) GAGGCCGCCAGGCAGGCCAAGGG LHX1 ENSG00000273706 -1.1332284259631777 [194,6] [14,2] -6 dCas9-VP64 positive selection 2438293
36939143 36939166 CHR_HSCHR17_7_CTG4 + 25494202 A375 resistance to PLX-4720 (puromycin) GAGGCCGCCAGGCAGGCCAAGGG LHX1 ENSG00000274577 -1.1332284259631777 [194,6] [14,2] -6 dCas9-VP64 positive selection 2438294
36939121 36939144 CHR_HSCHR17_7_CTG4 + 25494202 A375 resistance to PLX-4720 (puromycin) GGAGGGTCGCCCTGAGGACACGG LHX1 ENSG00000274577 1.2590257488124865 [35,30] [26,7] 5 dCas9-VP64 positive selection 2438295
36937291 36937314 17 + 25494202 A375 resistance to PLX-4720 (puromycin) GGAGGGTCGCCCTGAGGACACGG LHX1 ENSG00000273706 1.2590257488124865 [35,30] [26,7] 5 dCas9-VP64 positive selection 2438296
36939190 36939213 CHR_HSCHR17_7_CTG4 + 25494202 A375 resistance to PLX-4720 (zeocin) AGGGAAGGAGCGAGTGCGCCTGG LHX1 ENSG00000274577 -0.12291918432891902 [94,67] [37,10] -1 dCas9-VP64 positive selection 2533546
36937360 36937383 17 + 25494202 A375 resistance to PLX-4720 (zeocin) AGGGAAGGAGCGAGTGCGCCTGG LHX1 ENSG00000273706 -0.12291918432891902 [94,67] [37,10] -1 dCas9-VP64 positive selection 2533547
36937313 36937336 17 + 25494202 A375 resistance to PLX-4720 (zeocin) GAGGCCGCCAGGCAGGCCAAGGG LHX1 ENSG00000273706 0.51162211890238 [66,21] [30,10] 4 dCas9-VP64 positive selection 2533548
36939143 36939166 CHR_HSCHR17_7_CTG4 + 25494202 A375 resistance to PLX-4720 (zeocin) GAGGCCGCCAGGCAGGCCAAGGG LHX1 ENSG00000274577 0.51162211890238 [66,21] [30,10] 4 dCas9-VP64 positive selection 2533549
36939121 36939144 CHR_HSCHR17_7_CTG4 + 25494202 A375 resistance to PLX-4720 (zeocin) GGAGGGTCGCCCTGAGGACACGG LHX1 ENSG00000274577 -0.26368943391005684 [173,117] [46,32] -2 dCas9-VP64 positive selection 2533550
36937291 36937314 17 + 25494202 A375 resistance to PLX-4720 (zeocin) GGAGGGTCGCCCTGAGGACACGG LHX1 ENSG00000273706 -0.26368943391005684 [173,117] [46,32] -2 dCas9-VP64 positive selection 2533551
36938265 36938288 17 - 27260157 DLD1 viability CTGGACGCACTTGACGTGCCAGG LHX1 ENSG00000273706 1.02891436648963 [] [] 9 hSpCas9 negative selection 2579072
36938313 36938336 17 - 27260157 DLD1 viability TTCCCTGGAGAAGCACTTCTCGG LHX1 ENSG00000273706 0.887534001966447 [] [] 9 hSpCas9 negative selection 2581577
36938225 36938248 17 - 27260157 DLD1 viability AAGAGAAAGCGGTCCAGGATGGG LHX1 ENSG00000273706 0.104167082321704 [] [] 3 hSpCas9 negative selection 2581594
36938230 36938253 17 - 27260157 DLD1 viability CGTTCAAGAGAAAGCGGTCCAGG LHX1 ENSG00000273706 -0.243224413646402 [] [] -2 hSpCas9 negative selection 2586391
36938284 36938307 17 - 27260157 DLD1 viability TGCATTTACATTCACAGCACTGG LHX1 ENSG00000273706 0.870756093781253 [] [] 9 hSpCas9 negative selection 2605508
36938241 36938264 17 + 27260157 DLD1 viability TTCTCTTGAACGTGCTGGACAGG LHX1 ENSG00000273706 0.337051640926424 [] [] 4 hSpCas9 negative selection 2607523
36938247 36938270 17 + 27260157 DLD1 viability TGAACGTGCTGGACAGGGCCTGG LHX1 ENSG00000273706 0.800201010418416 [] [] 9 hSpCas9 negative selection 2612562
36938192 36938215 17 + 27260157 DLD1 viability AAGACCATGGTTCACTGTGCCGG LHX1 ENSG00000273706 -0.0620699071596508 [] [] 0 hSpCas9 negative selection 2614800
36938236 36938259 17 + 27260157 DLD1 viability CCGCTTTCTCTTGAACGTGCTGG LHX1 ENSG00000273706 -1.26499691751675 [] [] -7 hSpCas9 negative selection 2623569
36938308 36938331 17 - 27260157 DLD1 viability TGGAGAAGCACTTCTCGGTCAGG LHX1 ENSG00000273706 -0.0769646394496257 [] [] 0 hSpCas9 negative selection 2648705
36938265 36938288 17 - 27260157 HT1080 viability CTGGACGCACTTGACGTGCCAGG LHX1 ENSG00000273706 1.19107194027728 [] [] 8 hSpCas9 negative selection 2655202
36938313 36938336 17 - 27260157 HT1080 viability TTCCCTGGAGAAGCACTTCTCGG LHX1 ENSG00000273706 0.801155366227057 [] [] 7 hSpCas9 negative selection 2657707
36938225 36938248 17 - 27260157 HT1080 viability AAGAGAAAGCGGTCCAGGATGGG LHX1 ENSG00000273706 0.394955733337796 [] [] 3 hSpCas9 negative selection 2657724
36938230 36938253 17 - 27260157 HT1080 viability CGTTCAAGAGAAAGCGGTCCAGG LHX1 ENSG00000273706 -1.48749866594047 [] [] -9 hSpCas9 negative selection 2662521
36938284 36938307 17 - 27260157 HT1080 viability TGCATTTACATTCACAGCACTGG LHX1 ENSG00000273706 0.841583330369886 [] [] 7 hSpCas9 negative selection 2681638
36938241 36938264 17 + 27260157 HT1080 viability TTCTCTTGAACGTGCTGGACAGG LHX1 ENSG00000273706 0.885645627337968 [] [] 7 hSpCas9 negative selection 2683653
36938247 36938270 17 + 27260157 HT1080 viability TGAACGTGCTGGACAGGGCCTGG LHX1 ENSG00000273706 0.669360438055816 [] [] 6 hSpCas9 negative selection 2688692
36938192 36938215 17 + 27260157 HT1080 viability AAGACCATGGTTCACTGTGCCGG LHX1 ENSG00000273706 1.04777695062261 [] [] 8 hSpCas9 negative selection 2690930
36938236 36938259 17 + 27260157 HT1080 viability CCGCTTTCTCTTGAACGTGCTGG LHX1 ENSG00000273706 -1.16684457447917 [] [] -8 hSpCas9 negative selection 2699699
36938308 36938331 17 - 27260157 HT1080 viability TGGAGAAGCACTTCTCGGTCAGG LHX1 ENSG00000273706 -0.0233133177363879 [] [] 0 hSpCas9 negative selection 2724835
36938265 36938288 17 - 27260157 MKN45 viability CTGGACGCACTTGACGTGCCAGG LHX1 ENSG00000273706 1.12039694474729 [] [] 8 hSpCas9 negative selection 2731332
36938313 36938336 17 - 27260157 MKN45 viability TTCCCTGGAGAAGCACTTCTCGG LHX1 ENSG00000273706 0.171280995060055 [] [] 5 hSpCas9 negative selection 2733837
36938225 36938248 17 - 27260157 MKN45 viability AAGAGAAAGCGGTCCAGGATGGG LHX1 ENSG00000273706 0.919628498022357 [] [] 8 hSpCas9 negative selection 2733854
36938230 36938253 17 - 27260157 MKN45 viability CGTTCAAGAGAAAGCGGTCCAGG LHX1 ENSG00000273706 -0.992126675185821 [] [] -7 hSpCas9 negative selection 2738651
36938284 36938307 17 - 27260157 MKN45 viability TGCATTTACATTCACAGCACTGG LHX1 ENSG00000273706 0.00611433799015201 [] [] 0 hSpCas9 negative selection 2757768
36938241 36938264 17 + 27260157 MKN45 viability TTCTCTTGAACGTGCTGGACAGG LHX1 ENSG00000273706 0.302029639959777 [] [] 5 hSpCas9 negative selection 2759783
36938247 36938270 17 + 27260157 MKN45 viability TGAACGTGCTGGACAGGGCCTGG LHX1 ENSG00000273706 0.310495123770094 [] [] 5 hSpCas9 negative selection 2764822
36938192 36938215 17 + 27260157 MKN45 viability AAGACCATGGTTCACTGTGCCGG LHX1 ENSG00000273706 0.0736443158053714 [] [] 0 hSpCas9 negative selection 2767060
36938236 36938259 17 + 27260157 MKN45 viability CCGCTTTCTCTTGAACGTGCTGG LHX1 ENSG00000273706 -2.14479636408316 [] [] -9 hSpCas9 negative selection 2775829
36938308 36938331 17 - 27260157 MKN45 viability TGGAGAAGCACTTCTCGGTCAGG LHX1 ENSG00000273706 -1.33402070149543 [] [] -8 hSpCas9 negative selection 2800965
36938265 36938288 17 - 27260157 RKO viability CTGGACGCACTTGACGTGCCAGG LHX1 ENSG00000273706 1.1883649641899 [] [] 9 hSpCas9 negative selection 2807462
36938313 36938336 17 - 27260157 RKO viability TTCCCTGGAGAAGCACTTCTCGG LHX1 ENSG00000273706 0.224370080838561 [] [] 1 hSpCas9 negative selection 2809967
36938225 36938248 17 - 27260157 RKO viability AAGAGAAAGCGGTCCAGGATGGG LHX1 ENSG00000273706 0.768790171907436 [] [] 8 hSpCas9 negative selection 2809984
36938230 36938253 17 - 27260157 RKO viability CGTTCAAGAGAAAGCGGTCCAGG LHX1 ENSG00000273706 -0.678324954948196 [] [] -7 hSpCas9 negative selection 2814781
36938284 36938307 17 - 27260157 RKO viability TGCATTTACATTCACAGCACTGG LHX1 ENSG00000273706 0.217738477445822 [] [] 1 hSpCas9 negative selection 2833898
36938241 36938264 17 + 27260157 RKO viability TTCTCTTGAACGTGCTGGACAGG LHX1 ENSG00000273706 0.532134273614232 [] [] 3 hSpCas9 negative selection 2835913
36938247 36938270 17 + 27260157 RKO viability TGAACGTGCTGGACAGGGCCTGG LHX1 ENSG00000273706 0.998521765391558 [] [] 9 hSpCas9 negative selection 2840952
36938192 36938215 17 + 27260157 RKO viability AAGACCATGGTTCACTGTGCCGG LHX1 ENSG00000273706 1.43008952370543 [] [] 9 hSpCas9 negative selection 2843190
36938236 36938259 17 + 27260157 RKO viability CCGCTTTCTCTTGAACGTGCTGG LHX1 ENSG00000273706 -1.77418191040107 [] [] -9 hSpCas9 negative selection 2851959
36938308 36938331 17 - 27260157 RKO viability TGGAGAAGCACTTCTCGGTCAGG LHX1 ENSG00000273706 0.322596790393728 [] [] 1 hSpCas9 negative selection 2877095
36938265 36938288 17 - 27260157 SF268 viability CTGGACGCACTTGACGTGCCAGG LHX1 ENSG00000273706 1.10086830949175 [] [] 9 hSpCas9 negative selection 2883592
36938313 36938336 17 - 27260157 SF268 viability TTCCCTGGAGAAGCACTTCTCGG LHX1 ENSG00000273706 1.00923471470122 [] [] 9 hSpCas9 negative selection 2886097
36938225 36938248 17 - 27260157 SF268 viability AAGAGAAAGCGGTCCAGGATGGG LHX1 ENSG00000273706 -0.276983678778751 [] [] -2 hSpCas9 negative selection 2886114
36938230 36938253 17 - 27260157 SF268 viability CGTTCAAGAGAAAGCGGTCCAGG LHX1 ENSG00000273706 -0.324833954501529 [] [] -3 hSpCas9 negative selection 2890911
36938284 36938307 17 - 27260157 SF268 viability TGCATTTACATTCACAGCACTGG LHX1 ENSG00000273706 -0.397992020514827 [] [] -3 hSpCas9 negative selection 2910028
36938241 36938264 17 + 27260157 SF268 viability TTCTCTTGAACGTGCTGGACAGG LHX1 ENSG00000273706 0.941494248082951 [] [] 9 hSpCas9 negative selection 2912043
36938247 36938270 17 + 27260157 SF268 viability TGAACGTGCTGGACAGGGCCTGG LHX1 ENSG00000273706 0.0963291334296027 [] [] 0 hSpCas9 negative selection 2917082
36938192 36938215 17 + 27260157 SF268 viability AAGACCATGGTTCACTGTGCCGG LHX1 ENSG00000273706 0.222326561181695 [] [] 3 hSpCas9 negative selection 2919320
36938236 36938259 17 + 27260157 SF268 viability CCGCTTTCTCTTGAACGTGCTGG LHX1 ENSG00000273706 -2.04789642172318 [] [] -8 hSpCas9 negative selection 2928089
36938308 36938331 17 - 27260157 SF268 viability TGGAGAAGCACTTCTCGGTCAGG LHX1 ENSG00000273706 -0.416114369154696 [] [] -3 hSpCas9 negative selection 2953225
36938236 36938259 17 - 27453484 HT29 resistance to T3SS1-dependent cytotoxicity CCAGCACGTTCAAGAGAAAGCGG LHX1 ENSG00000273706 0.6133588579596867 [3,2] [3,4] 9 hSpCas9 positive selection 2999386
36938312 36938335 17 + 27453484 HT29 resistance to T3SS1-dependent cytotoxicity GACCGAGAAGTGCTTCTCCAGGG LHX1 ENSG00000273706 -0.22440012628048908 [2,3] [2,1] -3 hSpCas9 positive selection 2999387
36938196 36938219 17 - 27453484 HT29 resistance to T3SS1-dependent cytotoxicity GCAGCCGGCACAGTGAACCATGG LHX1 ENSG00000273706 -1.0512632036045664 [2,2] [1,0] -9 hSpCas9 positive selection 2999388
36938236 36938259 17 - 27453484 HT29 resistance to T3SS2-dependent cytotoxicity CCAGCACGTTCAAGAGAAAGCGG LHX1 ENSG00000273706 0.1746282859461628 [3,3] [2,2] 3 hSpCas9 positive selection 3067244
36938312 36938335 17 + 27453484 HT29 resistance to T3SS2-dependent cytotoxicity GACCGAGAAGTGCTTCTCCAGGG LHX1 ENSG00000273706 -0.03098291529613717 [2,2] [3,0] 0 hSpCas9 positive selection 3067245
36938196 36938219 17 - 27453484 HT29 resistance to T3SS2-dependent cytotoxicity GCAGCCGGCACAGTGAACCATGG LHX1 ENSG00000273706 -0.44297623088624943 [2,2] [1,0] -6 hSpCas9 positive selection 3067246
36938236 36938259 17 - 26780180 HT29 viability (Avana library 4 designs) CCAGCACGTTCAAGAGAAAGCGG LHX1 ENSG00000273706 0.531027920110939 [] [] 2 hSpCas9 negative selection 3436933
36938311 36938334 17 + 26780180 HT29 viability (Avana library 4 designs) GACCGAGAAGTGCTTCTCCAGGG LHX1 ENSG00000273706 0.41521903601743 [] [] 1 hSpCas9 negative selection 3436934
36938196 36938219 17 - 26780180 HT29 viability (Avana library 4 designs) GCAGCCGGCACAGTGAACCATGG LHX1 ENSG00000273706 2.73513426041117 [] [] 8 hSpCas9 negative selection 3436935
36938196 36938219 17 - 26780180 A375 viability (Avana lentiCRISPRv2) GCAGCCGGCACAGTGAACCATGG LHX1 ENSG00000273706 5.4831137935089 [] [] 8 hSpCas9 negative selection 3525400
36938236 36938259 17 - 26780180 A375 viability (Avana lentiCRISPRv2) CCAGCACGTTCAAGAGAAAGCGG LHX1 ENSG00000273706 4.07982100119233 [] [] 6 hSpCas9 negative selection 3525401
36938311 36938334 17 + 26780180 A375 viability (Avana lentiCRISPRv2) GACCGAGAAGTGCTTCTCCAGGG LHX1 ENSG00000273706 -2.32135975329293 [] [] -3 hSpCas9 negative selection 3525402
36938196 36938219 17 - 26780180 A375 viability (Avana lentiGuide) GCAGCCGGCACAGTGAACCATGG LHX1 ENSG00000273706 8.37301430043494 [] [] 6 hSpCas9 negative selection 3634059
36938236 36938259 17 - 26780180 A375 viability (Avana lentiGuide) CCAGCACGTTCAAGAGAAAGCGG LHX1 ENSG00000273706 -4.66281264257853 [] [] -7 hSpCas9 negative selection 3634060
36938311 36938334 17 + 26780180 A375 viability (Avana lentiGuide) GACCGAGAAGTGCTTCTCCAGGG LHX1 ENSG00000273706 3.80154187609528 [] [] 4 hSpCas9 negative selection 3634061
36938196 36938219 17 - 26780180 A375 resistance to vemurafenib (Avana lentiCRISPRv2) GCAGCCGGCACAGTGAACCATGG LHX1 ENSG00000273706 -0.03192307238463493 [4] [4,3] 0 hSpCas9 positive selection 3742718
36938236 36938259 17 - 26780180 A375 resistance to vemurafenib (Avana lentiCRISPRv2) CCAGCACGTTCAAGAGAAAGCGG LHX1 ENSG00000273706 0.15237054138896947 [4] [5,4] 4 hSpCas9 positive selection 3742719
36938311 36938334 17 + 26780180 A375 resistance to vemurafenib (Avana lentiCRISPRv2) GACCGAGAAGTGCTTCTCCAGGG LHX1 ENSG00000273706 -0.12907156292663102 [5] [4,4] -2 hSpCas9 positive selection 3742720
36938196 36938219 17 - 26780180 A375 resistance to vemurafenib (Avana lentiGuide) GCAGCCGGCACAGTGAACCATGG LHX1 ENSG00000273706 -0.1635465512974077 [5] [3,4] -2 hSpCas9 positive selection 3851325
36938236 36938259 17 - 26780180 A375 resistance to vemurafenib (Avana lentiGuide) CCAGCACGTTCAAGAGAAAGCGG LHX1 ENSG00000273706 -0.15304294125073703 [4] [3,2] -2 hSpCas9 positive selection 3851326
36938311 36938334 17 + 26780180 A375 resistance to vemurafenib (Avana lentiGuide) GACCGAGAAGTGCTTCTCCAGGG LHX1 ENSG00000273706 0.11545479481165231 [5] [4,4] 2 hSpCas9 positive selection 3851327
36937136 36937159 17 + 27661255 K562 viability GCGACTGTGGGGTTAGACGGAGG LHX1 ENSG00000273706 0.08584224003943408 [556,542] [486,448] 3 dCas9-KRAB negative selection 5490232
36937291 36937314 17 + 27661255 K562 viability GGAGGGTCGCCCTGAGGACACGG LHX1 ENSG00000273706 0.17060290873775397 [1160,1214] [1185,965] 6 dCas9-KRAB negative selection 5490233
36937341 36937364 17 + 27661255 K562 viability GTGACTGGGCTGGGGCGGTAGGG LHX1 ENSG00000273706 0.08840536337403782 [1049,1121] [958,888] 3 dCas9-KRAB negative selection 5490234
36937909 36937932 17 - 27661255 K562 viability GGGCGAGGAAAAGAAGTCTCAGG LHX1 ENSG00000273706 0.0312106789336285 [1295,1205] [1022,1021] 1 dCas9-KRAB negative selection 5490235
36938241 36938264 17 + 27869803 HPAFII viability after 27 days TTCTCTTGAACGTGCTGGACAGG LHX1 ENSG00000273706 0.26679968891515005 [189] [159,86,NaN] 2 hSpCas9 negative selection 9560210
36938241 36938264 17 + 27869803 HPAFII viability after 15 days TTCTCTTGAACGTGCTGGACAGG LHX1 ENSG00000273706 -0.14476499551032807 [189] [217,163,NaN] -2 hSpCas9 negative selection 9642659
36938241 36938264 17 + 27869803 ASPC1 viability after 36 days TTCTCTTGAACGTGCTGGACAGG LHX1 ENSG00000273706 1.8465208494863836 [286] [451,163,447] 9 hSpCas9 negative selection 9725108
36938241 36938264 17 + 27869803 PATU8988S viability after 35 days TTCTCTTGAACGTGCTGGACAGG LHX1 ENSG00000273706 0.15611812674534042 [290] [171,88,NaN] 1 hSpCas9 negative selection 9807557
36938241 36938264 17 + 27869803 PATU8988S viability after 31 days TTCTCTTGAACGTGCTGGACAGG LHX1 ENSG00000273706 0.28690884832805297 [290] [163,112,NaN] 3 hSpCas9 negative selection 9890006
36938241 36938264 17 + 27869803 HPAFII viability after 35 days TTCTCTTGAACGTGCTGGACAGG LHX1 ENSG00000273706 0.7887144188209578 [189] [144,189,NaN] 5 hSpCas9 negative selection 9972455
36938241 36938264 17 + 27869803 HPAFII viability after 31 days TTCTCTTGAACGTGCTGGACAGG LHX1 ENSG00000273706 0.8123925319421033 [189] [192,180,NaN] 6 hSpCas9 negative selection 10054904
36938196 36938219 17 - 28162770 P31FUJ viability GCAGCCGGCACAGTGAACCATGG LHX1 ENSG00000273706 -0.4049416269221331 [488] [433] -4 hSpCas9 negative selection 10184306
36938196 36938219 17 - 28162770 TF1 viability GCAGCCGGCACAGTGAACCATGG LHX1 ENSG00000273706 NaN [NaN] [446] 1 hSpCas9 negative selection 10353672
36938196 36938219 17 - 28162770 SKM1 viability GCAGCCGGCACAGTGAACCATGG LHX1 ENSG00000273706 0.08918903502013853 [133] [251] 0 hSpCas9 negative selection 10523038
36938196 36938219 17 - 28162770 SKM1 viability GCAGCCGGCACAGTGAACCATGG LHX1 ENSG00000273706 0.08918903502013853 [133] [251] 0 hSpCas9 negative selection 10692404
36938196 36938219 17 - 28162770 PL21 viability GCAGCCGGCACAGTGAACCATGG LHX1 ENSG00000273706 -0.4276178259726223 [478] [154] -3 hSpCas9 negative selection 10861770
36938196 36938219 17 - 28162770 P31FUJ viability GCAGCCGGCACAGTGAACCATGG LHX1 ENSG00000273706 -0.4049416269221331 [488] [433] -4 hSpCas9 negative selection 11031136
36938196 36938219 17 - 28162770 OCIAML5 viability GCAGCCGGCACAGTGAACCATGG LHX1 ENSG00000273706 0.2961166514242488 [207] [460] 2 hSpCas9 negative selection 11200502
36938196 36938219 17 - 28162770 EOL1 viability GCAGCCGGCACAGTGAACCATGG LHX1 ENSG00000273706 0.2306508992962144 [989] [611] 2 hSpCas9 negative selection 11369868
36938196 36938219 17 - 28162770 MOLM13 viability GCAGCCGGCACAGTGAACCATGG LHX1 ENSG00000273706 -0.5232215266191518 [808] [406] -3 hSpCas9 negative selection 11539234
36938196 36938219 17 - 28162770 HEL viability GCAGCCGGCACAGTGAACCATGG LHX1 ENSG00000273706 0.006932653864729188 [591] [380] 0 hSpCas9 negative selection 11708600
36938196 36938219 17 - 28162770 MV411 viability GCAGCCGGCACAGTGAACCATGG LHX1 ENSG00000273706 -0.41052678088128747 [455] [288] -3 hSpCas9 negative selection 11877966
36938196 36938219 17 - 28162770 MONOMAC1 viability GCAGCCGGCACAGTGAACCATGG LHX1 ENSG00000273706 -0.46833886887694787 [349] [289] -4 hSpCas9 negative selection 12047332
36938196 36938219 17 - 28162770 OCIAML2 viability GCAGCCGGCACAGTGAACCATGG LHX1 ENSG00000273706 0.5913301668591906 [93] [784] 6 hSpCas9 negative selection 12216698
36938196 36938219 17 - 28162770 OCIAML3 viability GCAGCCGGCACAGTGAACCATGG LHX1 ENSG00000273706 0.7826376242722677 [118] [617] 7 hSpCas9 negative selection 12386064