Crispr

Gene Info

  • Species:Human (Homo sapiens)
  • GeneID:256329
  • Symbol:LMNTD2
  • Description:lamin tail domain containing 2
DataSource: http://genomecrispr.dkfz.de/#!/results/LMNTD2

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Start The end chr strand pubmed cellline condition sequence symbol ensg log2fc rc_initial rc_final effect cas screentype index
555173 555196 CHR_HSCHR11_1_CTG8 + 25494202 A375 resistance to PLX-4720 (puromycin) GAGGAGAGGGGAGGGGCGGGGAG LMNTD2 ENSG00000275873 2.57826473426589 [0,0] [0,1] 8 dCas9-VP64 positive selection 2428833
555174 555197 11 + 25494202 A375 resistance to PLX-4720 (puromycin) GAGGAGAGGGGAGGGGCGGGGAG LMNTD2 ENSG00000185522 2.57826473426589 [0,0] [0,1] 8 dCas9-VP64 positive selection 2428834
555173 555196 CHR_HSCHR11_1_CTG8 + 25494202 A375 resistance to PLX-4720 (zeocin) GAGGAGAGGGGAGGGGCGGGGAG LMNTD2 ENSG00000275873 -1.4054213549576637 [109,21] [13,1] -9 dCas9-VP64 positive selection 2524088
555174 555197 11 + 25494202 A375 resistance to PLX-4720 (zeocin) GAGGAGAGGGGAGGGGCGGGGAG LMNTD2 ENSG00000185522 -1.4054213549576637 [109,21] [13,1] -9 dCas9-VP64 positive selection 2524089
557031 557054 11 - 27453484 HT29 resistance to T3SS1-dependent cytotoxicity CCTCTGGAAAGCATTCCGAGCGG LMNTD2 ENSG00000185522 0.036161971550550315 [4,4] [3,3] 0 hSpCas9 positive selection 2999700
556872 556895 11 + 27453484 HT29 resistance to T3SS1-dependent cytotoxicity GCGCTTGCTCGGAGGAAGCGCGG LMNTD2 ENSG00000185522 -0.019975318629521205 [2,3] [3,1] 0 hSpCas9 positive selection 2999701
557031 557054 11 - 27453484 HT29 resistance to T3SS2-dependent cytotoxicity CCTCTGGAAAGCATTCCGAGCGG LMNTD2 ENSG00000185522 0.270840836603956 [4,4] [5,2] 5 hSpCas9 positive selection 3067558
556872 556895 11 + 27453484 HT29 resistance to T3SS2-dependent cytotoxicity GCGCTTGCTCGGAGGAAGCGCGG LMNTD2 ENSG00000185522 -0.2681903374447462 [2,2] [2,0] -4 hSpCas9 positive selection 3067559
557031 557054 11 - 26780180 HT29 viability (Avana library 4 designs) CCTCTGGAAAGCATTCCGAGCGG LMNTD2 ENSG00000185522 0.592854358863681 [] [] 2 hSpCas9 negative selection 3437261
556871 556894 11 + 26780180 HT29 viability (Avana library 4 designs) GCGCTTGCTCGGAGGAAGCGCGG LMNTD2 ENSG00000185522 0.325854028518825 [] [] 1 hSpCas9 negative selection 3437262
557031 557054 11 - 26780180 A375 viability (Avana lentiCRISPRv2) CCTCTGGAAAGCATTCCGAGCGG LMNTD2 ENSG00000185522 3.47930812420737 [] [] 5 hSpCas9 negative selection 3525889
556871 556894 11 + 26780180 A375 viability (Avana lentiCRISPRv2) GCGCTTGCTCGGAGGAAGCGCGG LMNTD2 ENSG00000185522 4.29245068131483 [] [] 7 hSpCas9 negative selection 3525890
557015 557038 11 - 26780180 A375 viability (Avana lentiCRISPRv2) CGAGCGGCATCACAAGACCGTGG LMNTD2 ENSG00000185522 -0.0534049652962351 [] [] 0 hSpCas9 negative selection 3525891
557031 557054 11 - 26780180 A375 viability (Avana lentiGuide) CCTCTGGAAAGCATTCCGAGCGG LMNTD2 ENSG00000185522 1.47332580472132 [] [] 1 hSpCas9 negative selection 3634548
556871 556894 11 + 26780180 A375 viability (Avana lentiGuide) GCGCTTGCTCGGAGGAAGCGCGG LMNTD2 ENSG00000185522 2.78899190021406 [] [] 3 hSpCas9 negative selection 3634549
557015 557038 11 - 26780180 A375 viability (Avana lentiGuide) CGAGCGGCATCACAAGACCGTGG LMNTD2 ENSG00000185522 0.500650522468912 [] [] 0 hSpCas9 negative selection 3634550
557031 557054 11 - 26780180 A375 resistance to vemurafenib (Avana lentiCRISPRv2) CCTCTGGAAAGCATTCCGAGCGG LMNTD2 ENSG00000185522 0.1562533753869448 [6] [6,6] 4 hSpCas9 positive selection 3743207
556871 556894 11 + 26780180 A375 resistance to vemurafenib (Avana lentiCRISPRv2) GCGCTTGCTCGGAGGAAGCGCGG LMNTD2 ENSG00000185522 0.1430993601878263 [3] [3,4] 4 hSpCas9 positive selection 3743208
557015 557038 11 - 26780180 A375 resistance to vemurafenib (Avana lentiCRISPRv2) CGAGCGGCATCACAAGACCGTGG LMNTD2 ENSG00000185522 0.4668075306193817 [3] [4,5] 9 hSpCas9 positive selection 3743209
557031 557054 11 - 26780180 A375 resistance to vemurafenib (Avana lentiGuide) CCTCTGGAAAGCATTCCGAGCGG LMNTD2 ENSG00000185522 0.32610858351136207 [6] [6,7] 8 hSpCas9 positive selection 3851814
556871 556894 11 + 26780180 A375 resistance to vemurafenib (Avana lentiGuide) GCGCTTGCTCGGAGGAAGCGCGG LMNTD2 ENSG00000185522 -0.311493973578362 [5] [4,1] -4 hSpCas9 positive selection 3851815
557015 557038 11 - 26780180 A375 resistance to vemurafenib (Avana lentiGuide) CGAGCGGCATCACAAGACCGTGG LMNTD2 ENSG00000185522 -0.8818145561678941 [4] [2,1] -8 hSpCas9 positive selection 3851816
557443 557466 11 - 26780180 A375 viability ATTGGAACAGCGTTGCCCGCCGG LMNTD2 ENSG00000185522 0.734938135224262 [] [] 2 hSpCas9 negative selection 3957464
557475 557498 11 - 26780180 A375 viability TCCTGGCCAGGGCTTTCGGCTGG LMNTD2 ENSG00000185522 0.758683237671131 [] [] 3 hSpCas9 negative selection 3957465
557443 557466 11 - 26780180 HT29 viability (GeCKOv2 library) ATTGGAACAGCGTTGCCCGCCGG LMNTD2 ENSG00000185522 0.797651644171051 [] [] 3 hSpCas9 negative selection 4065430
557475 557498 11 - 26780180 HT29 viability (GeCKOv2 library) TCCTGGCCAGGGCTTTCGGCTGG LMNTD2 ENSG00000185522 1.15942384876635 [] [] 5 hSpCas9 negative selection 4065431
557443 557466 11 - 26780180 A375 resistance to vemurafenib (GeCKOv2 lentiGuide) ATTGGAACAGCGTTGCCCGCCGG LMNTD2 ENSG00000185522 -0.0028204488500741566 [3] [2,2] 0 hSpCas9 positive selection 4258834
557475 557498 11 - 26780180 A375 resistance to vemurafenib (GeCKOv2 lentiGuide) TCCTGGCCAGGGCTTTCGGCTGG LMNTD2 ENSG00000185522 -0.34224645196387204 [2] [2,0] -6 hSpCas9 positive selection 4258836
557443 557466 11 - 27260156 BXPC3 viability ATTGGAACAGCGTTGCCCGCCGG LMNTD2 ENSG00000185522 0.30748855695183563 [502] [692,545,723,636] 6 hSpCas9 negative selection 5531294
557475 557498 11 - 27260156 BXPC3 viability TCCTGGCCAGGGCTTTCGGCTGG LMNTD2 ENSG00000185522 0.26347083260590126 [369] [430,355,409,694] 6 hSpCas9 negative selection 5531296
557443 557466 11 - 27260156 A673 viability ATTGGAACAGCGTTGCCCGCCGG LMNTD2 ENSG00000185522 0.13911467975633934 [502] [732,608,652,673] 3 hSpCas9 negative selection 5652545
557475 557498 11 - 27260156 A673 viability TCCTGGCCAGGGCTTTCGGCTGG LMNTD2 ENSG00000185522 0.14432148010424578 [369] [453,448,509,549] 3 hSpCas9 negative selection 5652547
557443 557466 11 - 27260156 A375 viability ATTGGAACAGCGTTGCCCGCCGG LMNTD2 ENSG00000185522 0.21229287653202383 [502] [744,710,748,536] 3 hSpCas9 negative selection 5773796
557475 557498 11 - 27260156 A375 viability TCCTGGCCAGGGCTTTCGGCTGG LMNTD2 ENSG00000185522 0.30614533817063927 [369] [602,667,521,379] 4 hSpCas9 negative selection 5773798
557443 557466 11 - 27260156 COLO741 viability ATTGGAACAGCGTTGCCCGCCGG LMNTD2 ENSG00000185522 -0.01900706318379454 [502] [686,754,475] 0 hSpCas9 negative selection 5895047
557475 557498 11 - 27260156 COLO741 viability TCCTGGCCAGGGCTTTCGGCTGG LMNTD2 ENSG00000185522 0.33997827378043294 [369] [688,690,433] 7 hSpCas9 negative selection 5895049
557443 557466 11 - 27260156 CAL120 viability ATTGGAACAGCGTTGCCCGCCGG LMNTD2 ENSG00000185522 -0.08674256184514842 [502] [853,488,466] -1 hSpCas9 negative selection 6016298
557475 557498 11 - 27260156 CAL120 viability TCCTGGCCAGGGCTTTCGGCTGG LMNTD2 ENSG00000185522 0.1785814613280176 [369] [528,499,534] 2 hSpCas9 negative selection 6016300
557443 557466 11 - 27260156 CADOES1 viability ATTGGAACAGCGTTGCCCGCCGG LMNTD2 ENSG00000185522 -0.057274518199170774 [502] [453,374,347,627] -1 hSpCas9 negative selection 6137549
557475 557498 11 - 27260156 CADOES1 viability TCCTGGCCAGGGCTTTCGGCTGG LMNTD2 ENSG00000185522 -0.0539912380610677 [369] [327,359,280,357] -1 hSpCas9 negative selection 6137551
557443 557466 11 - 27260156 EWS502 viability ATTGGAACAGCGTTGCCCGCCGG LMNTD2 ENSG00000185522 0.04832456802063963 [502] [373,613,574,665] 0 hSpCas9 negative selection 6258800
557475 557498 11 - 27260156 EWS502 viability TCCTGGCCAGGGCTTTCGGCTGG LMNTD2 ENSG00000185522 0.022801189477672512 [369] [275,476,425,425] 0 hSpCas9 negative selection 6258802
557443 557466 11 - 27260156 EW8 viability ATTGGAACAGCGTTGCCCGCCGG LMNTD2 ENSG00000185522 0.044612039805134965 [502] [552,302,417,420] 0 hSpCas9 negative selection 6380051
557475 557498 11 - 27260156 EW8 viability TCCTGGCCAGGGCTTTCGGCTGG LMNTD2 ENSG00000185522 0.38986841298288416 [369] [553,381,371,283] 7 hSpCas9 negative selection 6380053
557443 557466 11 - 27260156 CORL105 viability ATTGGAACAGCGTTGCCCGCCGG LMNTD2 ENSG00000185522 0.0187426023216508 [502] [572,681,622,509] 0 hSpCas9 negative selection 6501302
557475 557498 11 - 27260156 CORL105 viability TCCTGGCCAGGGCTTTCGGCTGG LMNTD2 ENSG00000185522 0.08001953975474513 [369] [494,464,422,443] 1 hSpCas9 negative selection 6501304
557443 557466 11 - 27260156 HS294T viability ATTGGAACAGCGTTGCCCGCCGG LMNTD2 ENSG00000185522 0.5062748278736722 [502] [206,302,207,414] 6 hSpCas9 negative selection 6622553
557475 557498 11 - 27260156 HS294T viability TCCTGGCCAGGGCTTTCGGCTGG LMNTD2 ENSG00000185522 0.35068494748429846 [369] [293,137,118,165] 5 hSpCas9 negative selection 6622555
557443 557466 11 - 27260156 HCC44 viability ATTGGAACAGCGTTGCCCGCCGG LMNTD2 ENSG00000185522 0.24915857270631375 [502] [576,731,679,692] 4 hSpCas9 negative selection 6743804
557475 557498 11 - 27260156 HCC44 viability TCCTGGCCAGGGCTTTCGGCTGG LMNTD2 ENSG00000185522 0.059882389778124656 [369] [517,291,443,513] 0 hSpCas9 negative selection 6743806
557443 557466 11 - 27260156 G402 viability ATTGGAACAGCGTTGCCCGCCGG LMNTD2 ENSG00000185522 0.15325524280593777 [502] [496,836,253,1100] 2 hSpCas9 negative selection 6865055
557475 557498 11 - 27260156 G402 viability TCCTGGCCAGGGCTTTCGGCTGG LMNTD2 ENSG00000185522 -0.14511647932156108 [369] [266,504,505,341] -2 hSpCas9 negative selection 6865057
557443 557466 11 - 27260156 L33 viability ATTGGAACAGCGTTGCCCGCCGG LMNTD2 ENSG00000185522 0.17011977493764657 [502] [486,259,379,539] 4 hSpCas9 negative selection 6986306
557475 557498 11 - 27260156 L33 viability TCCTGGCCAGGGCTTTCGGCTGG LMNTD2 ENSG00000185522 -0.07392531783556522 [369] [309,174,237,291] -2 hSpCas9 negative selection 6986308
557443 557466 11 - 27260156 K562 viability ATTGGAACAGCGTTGCCCGCCGG LMNTD2 ENSG00000185522 0.28623316540456667 [502] [396,607,368,765] 3 hSpCas9 negative selection 7107557
557475 557498 11 - 27260156 K562 viability TCCTGGCCAGGGCTTTCGGCTGG LMNTD2 ENSG00000185522 0.7881205639243083 [369] [637,357,1117,190] 8 hSpCas9 negative selection 7107559
557443 557466 11 - 27260156 HT29 viability ATTGGAACAGCGTTGCCCGCCGG LMNTD2 ENSG00000185522 0.07963792840406321 [502] [620,931,694,386] 1 hSpCas9 negative selection 7228808
557475 557498 11 - 27260156 HT29 viability TCCTGGCCAGGGCTTTCGGCTGG LMNTD2 ENSG00000185522 0.1154093195834304 [369] [573,463,531,391] 2 hSpCas9 negative selection 7228810
557443 557466 11 - 27260156 MHHES1 viability ATTGGAACAGCGTTGCCCGCCGG LMNTD2 ENSG00000185522 0.021885438942183463 [502] [829,713,464,370] 0 hSpCas9 negative selection 7350059
557475 557498 11 - 27260156 MHHES1 viability TCCTGGCCAGGGCTTTCGGCTGG LMNTD2 ENSG00000185522 0.3902309337473449 [369] [658,747,518,330] 7 hSpCas9 negative selection 7350061
557443 557466 11 - 27260156 MEWO viability ATTGGAACAGCGTTGCCCGCCGG LMNTD2 ENSG00000185522 0.37267934392105406 [502] [730,676,442] 7 hSpCas9 negative selection 7471310
557475 557498 11 - 27260156 MEWO viability TCCTGGCCAGGGCTTTCGGCTGG LMNTD2 ENSG00000185522 0.16994965666412232 [369] [432,318,424] 4 hSpCas9 negative selection 7471312
557443 557466 11 - 27260156 LNCAPCLONEFGC viability ATTGGAACAGCGTTGCCCGCCGG LMNTD2 ENSG00000185522 -0.20958196385646183 [502] [315,309,454,510] -3 hSpCas9 negative selection 7592561
557475 557498 11 - 27260156 LNCAPCLONEFGC viability TCCTGGCCAGGGCTTTCGGCTGG LMNTD2 ENSG00000185522 0.0927454542587981 [369] [218,360,438,424] 1 hSpCas9 negative selection 7592563
557443 557466 11 - 27260156 PANC0327 viability ATTGGAACAGCGTTGCCCGCCGG LMNTD2 ENSG00000185522 -0.020085922171539455 [502] [551,557,199,445] 0 hSpCas9 negative selection 7713812
557475 557498 11 - 27260156 PANC0327 viability TCCTGGCCAGGGCTTTCGGCTGG LMNTD2 ENSG00000185522 0.260173374209971 [369] [450,224,489,434] 4 hSpCas9 negative selection 7713814
557443 557466 11 - 27260156 NCIH2009 viability ATTGGAACAGCGTTGCCCGCCGG LMNTD2 ENSG00000185522 0.2657703837917449 [502] [747,909,854] 3 hSpCas9 negative selection 7835063
557475 557498 11 - 27260156 NCIH2009 viability TCCTGGCCAGGGCTTTCGGCTGG LMNTD2 ENSG00000185522 0.11069315370683958 [369] [554,499,618] 1 hSpCas9 negative selection 7835065
557443 557466 11 - 27260156 NCIH1373 viability ATTGGAACAGCGTTGCCCGCCGG LMNTD2 ENSG00000185522 -0.4073377874201374 [502] [347,246,629,125] -4 hSpCas9 negative selection 7956314
557475 557498 11 - 27260156 NCIH1373 viability TCCTGGCCAGGGCTTTCGGCTGG LMNTD2 ENSG00000185522 0.3005171660474709 [369] [417,431,719,119] 3 hSpCas9 negative selection 7956316
557443 557466 11 - 27260156 PATU8902 viability ATTGGAACAGCGTTGCCCGCCGG LMNTD2 ENSG00000185522 0.5608398582148504 [502] [2488,361,592,738] 6 hSpCas9 negative selection 8077565
557475 557498 11 - 27260156 PATU8902 viability TCCTGGCCAGGGCTTTCGGCTGG LMNTD2 ENSG00000185522 0.5218947964550131 [369] [569,630,924,786] 5 hSpCas9 negative selection 8077567
557443 557466 11 - 27260156 PANC1 viability ATTGGAACAGCGTTGCCCGCCGG LMNTD2 ENSG00000185522 -0.5962242568652063 [502] [287,292,314,249] -7 hSpCas9 negative selection 8198816
557475 557498 11 - 27260156 PANC1 viability TCCTGGCCAGGGCTTTCGGCTGG LMNTD2 ENSG00000185522 -0.12024049183532226 [369] [375,272,314,208] -2 hSpCas9 negative selection 8198818
557443 557466 11 - 27260156 PANC0813 viability ATTGGAACAGCGTTGCCCGCCGG LMNTD2 ENSG00000185522 0.25686035708107047 [502] [755,763,654,654] 4 hSpCas9 negative selection 8320067
557475 557498 11 - 27260156 PANC0813 viability TCCTGGCCAGGGCTTTCGGCTGG LMNTD2 ENSG00000185522 -0.05815205407588442 [369] [500,381,450,346] -1 hSpCas9 negative selection 8320069
557443 557466 11 - 27260156 RDES viability ATTGGAACAGCGTTGCCCGCCGG LMNTD2 ENSG00000185522 -0.14769791267705248 [502] [445,426,596,650] -2 hSpCas9 negative selection 8441318
557475 557498 11 - 27260156 RDES viability TCCTGGCCAGGGCTTTCGGCTGG LMNTD2 ENSG00000185522 0.14165399107879864 [369] [357,398,594,561] 2 hSpCas9 negative selection 8441320
557443 557466 11 - 27260156 PC3 viability ATTGGAACAGCGTTGCCCGCCGG LMNTD2 ENSG00000185522 0.14239897008760438 [502] [338,709,911,416] 3 hSpCas9 negative selection 8562569
557475 557498 11 - 27260156 PC3 viability TCCTGGCCAGGGCTTTCGGCTGG LMNTD2 ENSG00000185522 0.1859804380469058 [369] [239,452,771,387] 4 hSpCas9 negative selection 8562571
557443 557466 11 - 27260156 PATU8988T viability ATTGGAACAGCGTTGCCCGCCGG LMNTD2 ENSG00000185522 0.4172779999931354 [502] [510,684,616,798] 7 hSpCas9 negative selection 8683820
557475 557498 11 - 27260156 PATU8988T viability TCCTGGCCAGGGCTTTCGGCTGG LMNTD2 ENSG00000185522 -0.16887689161860137 [369] [389,310,236,335] -3 hSpCas9 negative selection 8683822
557443 557466 11 - 27260156 T47D viability ATTGGAACAGCGTTGCCCGCCGG LMNTD2 ENSG00000185522 0.05909167867929223 [502] [629,591,578,643] 1 hSpCas9 negative selection 8805071
557475 557498 11 - 27260156 T47D viability TCCTGGCCAGGGCTTTCGGCTGG LMNTD2 ENSG00000185522 0.09622548153027169 [369] [470,430,466,476] 2 hSpCas9 negative selection 8805073
557443 557466 11 - 27260156 SU8686 viability ATTGGAACAGCGTTGCCCGCCGG LMNTD2 ENSG00000185522 0.2176375901757559 [502] [436,576,558,792] 3 hSpCas9 negative selection 8926322
557475 557498 11 - 27260156 SU8686 viability TCCTGGCCAGGGCTTTCGGCTGG LMNTD2 ENSG00000185522 0.24481857046353303 [369] [378,409,414,560] 4 hSpCas9 negative selection 8926324
557443 557466 11 - 27260156 SKES1 viability ATTGGAACAGCGTTGCCCGCCGG LMNTD2 ENSG00000185522 0.20648208433524318 [502] [1015,563,417,394] 4 hSpCas9 negative selection 9047573
557475 557498 11 - 27260156 SKES1 viability TCCTGGCCAGGGCTTTCGGCTGG LMNTD2 ENSG00000185522 0.08764472902012371 [369] [466,425,363,329] 2 hSpCas9 negative selection 9047575
557443 557466 11 - 27260156 TOV112D viability ATTGGAACAGCGTTGCCCGCCGG LMNTD2 ENSG00000185522 -0.18459973972688398 [502] [399,571,370,456] -4 hSpCas9 negative selection 9168824
557475 557498 11 - 27260156 TOV112D viability TCCTGGCCAGGGCTTTCGGCTGG LMNTD2 ENSG00000185522 0.3119302288783995 [369] [311,577,473,490] 6 hSpCas9 negative selection 9168826
557443 557466 11 - 27260156 TC71 viability ATTGGAACAGCGTTGCCCGCCGG LMNTD2 ENSG00000185522 0.19755690420225036 [502] [597,602,697,568] 5 hSpCas9 negative selection 9290075
557475 557498 11 - 27260156 TC71 viability TCCTGGCCAGGGCTTTCGGCTGG LMNTD2 ENSG00000185522 0.04797527792257861 [369] [411,427,446,347] 1 hSpCas9 negative selection 9290077
557443 557466 11 - 27260156 TC32 viability ATTGGAACAGCGTTGCCCGCCGG LMNTD2 ENSG00000185522 -0.043460197142725594 [502] [627,267,389,564] 0 hSpCas9 negative selection 9411326
557475 557498 11 - 27260156 TC32 viability TCCTGGCCAGGGCTTTCGGCTGG LMNTD2 ENSG00000185522 0.2710995434747517 [369] [348,456,451,390] 5 hSpCas9 negative selection 9411328