Crispr

Gene Info

• Species:Human (Homo sapiens)
• GeneID:10557
• Symbol:RPP38
• Description:ribonuclease P/MRP subunit p38

DataSource: http://genomecrispr.dkfz.de/#!/results/RPP38

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Start	The end	chr	strand	pubmed	cellline	condition	sequence	symbol	ensg	log2fc	rc_initial	rc_final	effect	cas	screentype	index
15098604	15098627	10	-	25494202	A375	resistance to PLX-4720 (puromycin)	CGTGAGCCACCGCGCCGGGCCGG	RPP38	ENSG00000152464	2.957041757877506	[6,11]	[29,1]	8	dCas9-VP64	positive selection	2432363
15098651	15098674	10	+	25494202	A375	resistance to PLX-4720 (puromycin)	GCCGAGGCGGGCGGATCACAAAG	RPP38	ENSG00000152464	0.6864243628519979	[21,12]	[10,0]	3	dCas9-VP64	positive selection	2442672
15097383	15097406	10	-	25494202	A375	resistance to PLX-4720 (puromycin)	AACTCACGATGGCGAATCCGTGG	RPP38	ENSG00000152464	-0.46469750746190885	[84,60]	[12,8]	-2	dCas9-VP64	positive selection	2468051
15097448	15097471	10	-	25494202	A375	resistance to PLX-4720 (puromycin)	AGTCCCGGGCCCGATCCCCCCGG	RPP38	ENSG00000152464	0.10767322584336148	[116,136]	[26,32]	0	dCas9-VP64	positive selection	2468052
15097430	15097453	10	+	25494202	A375	resistance to PLX-4720 (puromycin)	TAGGGCAGGAGGCCAGCCCCGGG	RPP38	ENSG00000152464	3.365380016613331	[103,4]	[123,119]	8	dCas9-VP64	positive selection	2468053
15100961	15100984	10	+	25494202	A375	resistance to PLX-4720 (puromycin)	GTGAGCCACTGCACCCGGCCTGG	RPP38	ENSG00000152464	1.1797326428655701	[26,26]	[14,10]	4	dCas9-VP64	positive selection	2469524
15098604	15098627	10	-	25494202	A375	resistance to PLX-4720 (zeocin)	CGTGAGCCACCGCGCCGGGCCGG	RPP38	ENSG00000152464	-1.2013674579810256	[43,200]	[15,17]	-9	dCas9-VP64	positive selection	2527618
15098651	15098674	10	+	25494202	A375	resistance to PLX-4720 (zeocin)	GCCGAGGCGGGCGGATCACAAAG	RPP38	ENSG00000152464	1.29845831928492	[54,84]	[92,21]	7	dCas9-VP64	positive selection	2537927
15097383	15097406	10	-	25494202	A375	resistance to PLX-4720 (zeocin)	AACTCACGATGGCGAATCCGTGG	RPP38	ENSG00000152464	-0.39764828858060297	[65,74]	[25,8]	-4	dCas9-VP64	positive selection	2563306
15097448	15097471	10	-	25494202	A375	resistance to PLX-4720 (zeocin)	AGTCCCGGGCCCGATCCCCCCGG	RPP38	ENSG00000152464	0.7594698920883791	[190,111]	[39,125]	5	dCas9-VP64	positive selection	2563307
15097430	15097453	10	+	25494202	A375	resistance to PLX-4720 (zeocin)	TAGGGCAGGAGGCCAGCCCCGGG	RPP38	ENSG00000152464	0.0838889296286604	[239,74]	[91,19]	0	dCas9-VP64	positive selection	2563308
15100961	15100984	10	+	25494202	A375	resistance to PLX-4720 (zeocin)	GTGAGCCACTGCACCCGGCCTGG	RPP38	ENSG00000152464	0.8568341606696415	[42,16]	[22,11]	6	dCas9-VP64	positive selection	2564779
15097412	15097435	10	+	27661255	K562	viability	GGGCGCGCGGGGCCCACGTAGGG	RPP38	ENSG00000152464	-0.0641290794958147	[1735,1793]	[1431,1275]	-2	dCas9-KRAB	negative selection	5465779
15097281	15097304	10	-	27661255	K562	viability	GCAGACGCGACGGGCCGGGGAGG	RPP38	ENSG00000152464	-0.7770449579126105	[364,407]	[222,142]	-8	dCas9-KRAB	negative selection	5465780
15097571	15097594	10	-	27661255	K562	viability	GCGCCCGGCCCGGGACTGGGCGG	RPP38	ENSG00000152464	-1.5132769587932937	[417,340]	[145,72]	-9	dCas9-KRAB	negative selection	5465781
15097609	15097632	10	-	27661255	K562	viability	GAGGAGCCGGACTAGAAACGCGG	RPP38	ENSG00000152464	-0.7449432154316047	[833,828]	[404,388]	-8	dCas9-KRAB	negative selection	5465782
15097412	15097435	10	+	27661255	K562	viability	GGGCGCGCGGGGCCCACGTAGGG	RPP38	ENSG00000152464	-0.0641290794958147	[1735,1793]	[1431,1275]	-2	dCas9-KRAB	negative selection	5508483
15097454	15097477	10	+	27661255	K562	viability	GGATCGGGCCCGGGACTCTGCGG	RPP38	ENSG00000152464	0.22366680605640366	[855,1091]	[1018,806]	7	dCas9-KRAB	negative selection	5508484
15097372	15097395	10	-	27661255	K562	viability	GCGAATCCGTGGTCACCTGAAGG	RPP38	ENSG00000152464	-0.9420603684672266	[519,329]	[189,167]	-8	dCas9-KRAB	negative selection	5508485