Crispr

Gene Info

• Species:Human (Homo sapiens)
• GeneID:90525
• Symbol:shf
• Description:Src homology 2 domain containing F

DataSource: http://genomecrispr.dkfz.de/#!/results/shf

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Start	The end	chr	strand	pubmed	cellline	condition	sequence	symbol	ensg	log2fc	rc_initial	rc_final	effect	cas	screentype	index
45200726	45200749	15	-	26627737	DLD1	viability	TACAACTTCCTTGAGGCGCGAGG	SHF	ENSG00000138606	0.10240832759394242	[565]	[175,288,119]	1	hSpCas9	negative selection	790818
45200726	45200749	15	-	26627737	GBM cells	viability after 5 days	TACAACTTCCTTGAGGCGCGAGG	SHF	ENSG00000138606	-0.30753700258174066	[284]	[140,105]	-5	hSpCas9	negative selection	873133
45200726	45200749	15	-	26627737	GBM cells	viability after 13 days	TACAACTTCCTTGAGGCGCGAGG	SHF	ENSG00000138606	-0.33063176621005963	[284]	[117,126]	-4	hSpCas9	negative selection	955448
45200726	45200749	15	-	26627737	GBM cells	viability after 21 days	TACAACTTCCTTGAGGCGCGAGG	SHF	ENSG00000138606	-0.09434410350443442	[284]	[155,134]	-1	hSpCas9	negative selection	1037763
45200726	45200749	15	-	26627737	RPE1	viability after 9 days	TACAACTTCCTTGAGGCGCGAGG	SHF	ENSG00000138606	0.5390251321173898	[915]	[348,503]	3	hSpCas9	negative selection	1120078
45200726	45200749	15	-	26627737	RPE1	viability after 12 days	TACAACTTCCTTGAGGCGCGAGG	SHF	ENSG00000138606	0.6422994339392292	[915]	[285,487]	4	hSpCas9	negative selection	1202393
45200726	45200749	15	-	26627737	RPE1	viability after 15 days	TACAACTTCCTTGAGGCGCGAGG	SHF	ENSG00000138606	1.2310683738312544	[915]	[790,431]	7	hSpCas9	negative selection	1284708
45200726	45200749	15	-	26627737	RPE1	viability after 18 days	TACAACTTCCTTGAGGCGCGAGG	SHF	ENSG00000138606	1.0246071706933266	[915]	[572,427]	6	hSpCas9	negative selection	1367023
45200726	45200749	15	-	26627737	HeLa	viability after 8 days	TACAACTTCCTTGAGGCGCGAGG	SHF	ENSG00000138606	0.23615194816453283	[286]	[121,110,198]	2	hSpCas9	negative selection	1449338
45200726	45200749	15	-	26627737	HeLa	viability after 12 days	TACAACTTCCTTGAGGCGCGAGG	SHF	ENSG00000138606	0.0989113518332495	[286]	[56,183,131]	0	hSpCas9	negative selection	1531653
45200726	45200749	15	-	26627737	HeLa	viability after 15 days	TACAACTTCCTTGAGGCGCGAGG	SHF	ENSG00000138606	0.13901952093972958	[286]	[82,229,68]	1	hSpCas9	negative selection	1613968
45200726	45200749	15	-	26627737	HeLa	viability after 18 days	TACAACTTCCTTGAGGCGCGAGG	SHF	ENSG00000138606	0.13874848886357938	[286]	[63,179,68]	1	hSpCas9	negative selection	1696283
45200726	45200749	15	-	26627737	HCT116	viability after 6 days	TACAACTTCCTTGAGGCGCGAGG	SHF	ENSG00000138606	-0.8608836035139554	[593]	[82,33]	-5	hSpCas9	negative selection	1778598
45200726	45200749	15	-	26627737	HCT116	viability after 8 days	TACAACTTCCTTGAGGCGCGAGG	SHF	ENSG00000138606	0.2301701535789022	[256]	[112,186,196]	2	hSpCas9	negative selection	1860913
45200726	45200749	15	-	26627737	HCT116	viability after 9 days	TACAACTTCCTTGAGGCGCGAGG	SHF	ENSG00000138606	0.059983110491749536	[593]	[142,182]	0	hSpCas9	negative selection	1943228
45200726	45200749	15	-	26627737	HCT116	viability after 12 days	TACAACTTCCTTGAGGCGCGAGG	SHF	ENSG00000138606	0.27363207232026643	[256]	[223,143,115]	3	hSpCas9	negative selection	2025543
45200726	45200749	15	-	26627737	HCT116	viability after 15 days	TACAACTTCCTTGAGGCGCGAGG	SHF	ENSG00000138606	0.35620762374296244	[256]	[236,176,158]	3	hSpCas9	negative selection	2107858
45200726	45200749	15	-	26627737	HCT116	viability after 18 days	TACAACTTCCTTGAGGCGCGAGG	SHF	ENSG00000138606	0.13314742271708832	[256]	[161,80,170]	1	hSpCas9	negative selection	2190173
45201044	45201067	15	+	27661255	K562	viability	GGGAGGAACCTGGTAGATAATGG	SHF	ENSG00000138606	0.1117748665054164	[909,916]	[877,711]	4	dCas9-KRAB	negative selection	5510902
45201087	45201110	15	+	27661255	K562	viability	GGCCGCCATCTAGACGAGAAGGG	SHF	ENSG00000138606	0.16227911603959144	[416,480]	[476,334]	5	dCas9-KRAB	negative selection	5510903
45200726	45200749	15	-	27869803	HPAFII	viability after 27 days	TACAACTTCCTTGAGGCGCGAGG	SHF	ENSG00000138606	-0.2343991613704383	[213]	[87,101,NaN]	-2	hSpCas9	negative selection	9553824
45200726	45200749	15	-	27869803	HPAFII	viability after 15 days	TACAACTTCCTTGAGGCGCGAGG	SHF	ENSG00000138606	0.8227922431074928	[213]	[576,300,NaN]	8	hSpCas9	negative selection	9636273
45200726	45200749	15	-	27869803	ASPC1	viability after 36 days	TACAACTTCCTTGAGGCGCGAGG	SHF	ENSG00000138606	-0.6993199001671926	[691]	[236,31,177]	-6	hSpCas9	negative selection	9718722
45200726	45200749	15	-	27869803	PATU8988S	viability after 35 days	TACAACTTCCTTGAGGCGCGAGG	SHF	ENSG00000138606	0.6301989054787221	[617]	[490,278,NaN]	7	hSpCas9	negative selection	9801171
45200726	45200749	15	-	27869803	PATU8988S	viability after 31 days	TACAACTTCCTTGAGGCGCGAGG	SHF	ENSG00000138606	0.6175321594266643	[617]	[352,409,NaN]	7	hSpCas9	negative selection	9883620
45200726	45200749	15	-	27869803	HPAFII	viability after 35 days	TACAACTTCCTTGAGGCGCGAGG	SHF	ENSG00000138606	0.527412151648794	[213]	[221,81,NaN]	3	hSpCas9	negative selection	9966069
45200726	45200749	15	-	27869803	HPAFII	viability after 31 days	TACAACTTCCTTGAGGCGCGAGG	SHF	ENSG00000138606	-0.15359000041089416	[213]	[151,59,NaN]	-1	hSpCas9	negative selection	10048518