RNAi

Gene Info

  • Species:Fly (Drosophila melanogaster)
  • GeneID:326237
  • Symbol:Ubi-p5E
  • Description:Ubiquitin-5E
DataSource: http://genomernai.dkfz.de/v16/genedetails/326237

Export (tab separated) Export to Excel
Stable_ID Entrez_ID Gene_ID Gene_Symbol Reagent_ID Score Phenotype Conditions Follow_Up Comment Screen_Title Publication_Title Authors Publication_Year Pubmed_ID Biosource Biomodel Assay Method Library Scope Reagent_Type Score_Type Cutoff Notes
GR00002-A 326237 HDC17662 DRSC18152 0.838956965 none no Lipid storage COPI complex is a regulator of lipid homeostasis. Beller et al. 2008 19067489 Cell line Kc167 Nuclear to lipid droplet cross-sectional area Fluorescence np Genome-wide dsRNA B-score > 2 OR < -1.7 Additional information about a secondary screen with non-overlaping dsRNAs
GR00002-A 326237 HDC17662 DRSC18152 0.011068656 none no Lipid storage COPI complex is a regulator of lipid homeostasis. Beller et al. 2008 19067489 Cell line Kc167 Nuclear to lipid droplet cross-sectional area Fluorescence np Genome-wide dsRNA B-score > 2 OR < -1.7 Additional information about a secondary screen with non-overlaping dsRNAs
GR00002-A 326237 HDC17662 DRSC18152 0.567417325 none no Lipid storage COPI complex is a regulator of lipid homeostasis. Beller et al. 2008 19067489 Cell line Kc167 Nuclear to lipid droplet cross-sectional area Fluorescence np Genome-wide dsRNA B-score > 2 OR < -1.7 Additional information about a secondary screen with non-overlaping dsRNAs
GR00002-A 326237 HDC17662 DRSC18152 1.002209361 none no Lipid storage COPI complex is a regulator of lipid homeostasis. Beller et al. 2008 19067489 Cell line Kc167 Nuclear to lipid droplet cross-sectional area Fluorescence np Genome-wide dsRNA B-score > 2 OR < -1.7 Additional information about a secondary screen with non-overlaping dsRNAs
GR00004-A-0 326237 CG11700 DRSC23384 1.01 Endo-siRNA reporter upregulated no Drosophila small RNA pathways Comparative analysis of argonaute-dependent small RNA pathways in Drosophila. Zhou et al. 2008 19026789 Cell line S2 miRNA and siRNA pathway activity Dual luciferase DRSC dsRNA Fold change endo-siRNA reporter 1.5/0.6
GR00004-A-0 326237 CG11700 DRSC23384 0.88 siRNA reporter upregulated no Drosophila small RNA pathways Comparative analysis of argonaute-dependent small RNA pathways in Drosophila. Zhou et al. 2008 19026789 Cell line S2 miRNA and siRNA pathway activity Dual luciferase DRSC dsRNA Fold change endo-siRNA reporter 1.5/0.6
GR00004-A-0 326237 CG11700 DRSC23384 1.44 miRNA reporter upregulated no Drosophila small RNA pathways Comparative analysis of argonaute-dependent small RNA pathways in Drosophila. Zhou et al. 2008 19026789 Cell line S2 miRNA and siRNA pathway activity Dual luciferase DRSC dsRNA Fold change endo-siRNA reporter 1.5/0.6
GR00031-A-1 326237 HFA18152 -0.3 none yes Cell growth and viability (1) Genome-wide RNAi analysis of growth and viability in Drosophila cells. Boutros et al. 2004 14764878 Cell line Kc167 Cell number and viability Luminescence Custom-made (HFA) Genome-wide dsRNA Z-score >
GR00031-A-2 326237 HFA18152 -0.4 none no Cell growth and viability (2) Genome-wide RNAi analysis of growth and viability in Drosophila cells. Boutros et al. 2004 14764878 Cell line S2R+ Cell number and viability Luminescence Custom-made (HFA) Genome-wide dsRNA Z-score >
GR00090-A-0 326237 FBgn0086558 CG32744 np strong Fewer lipid droplets no Lipid storage Functional genomic screen reveals genes involved in lipid-droplet formation and utilization. Guo et al. 2008 18408709 Cell line S2 Lipid droplet staining High content (microscopy) OpenBiosystems dsRNA Visual inspection np
GR00131-A-1 326237 CR11700 DRSC23384 50 - 75 Altered mitochondrial Ca2+ and/or H+ levels no Mitochondrial Ca2+/H+ antiporter regulation (1) Genome-wide RNAi screen identifies Letm1 as a mitochondrial Ca2+/H+ antiporter. Jiang et al. 2009 19797662 Cell line S2 mt-pericam protein expression (reporter of mitochondrial Ca2+ and H+ levels) Fluorescence np Genome-wide dsRNA Percentage inhibition Class I: > 75; class II: 50-75; class III: 25–50
GR00218-S 326237 CG32744 Ubi-p5E AMB31562 1.14 none no Hippo pathway regulation Salt-inducible kinases regulate growth through the Hippo signalling pathway in Drosophila Wehr et al. 2013 23263283 Cell line S2R+ Hippo pathway reporter Luminescence np Genome-wide dsRNA Z-score > 3 OR < -3 Author-submitted data. Primary screen
GR00223-A 326237 CR11700 DRSC23384 -2 - -1.2 Decreased intracellular Francisella tularensis infection yes Intracellular Francisella tularensis infection Host factors required for modulation of phagosome biogenesis and proliferation of Francisella tularensis within the cytosol. Akimana et al. 2010 20552012 Cell line S2R+ GFP protein expression Fluorescence np Selected genes dsRNA Z-score Strong: >3 OR <-2; medium: >2 OR <-1.2; weak: <-0.75 Additional information about the primary genome-wide screen
GR00311-A 326237 np np DRSC18152 np none Actin and microtubule morphology Comparative RNAi screening identifies a conserved core metazoan actinome by phenotype Rohn et al. 2011 21893601 Cell line S2R+ Alpha-tubulin and F-actin protein expression Fluorescence DRSC Genome-wide dsRNA Visual inspection np Exact phenotypes are shown in the comment section. Several genes were indicated as hits but no phenotype was provided. The screen data plus images is available at http://jcb-dataviewer.rupress.org/jcb/browse/4609/S2.
326237 FBgn0086558 np np sp none