RNAi

Gene Info

  • Species:Fly (Drosophila melanogaster)
  • GeneID:3355013
  • Symbol:Gprk1
  • Description:G protein-coupled receptor kinase 1
DataSource: http://genomernai.dkfz.de/v16/genedetails/3355013

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Stable_ID Entrez_ID Gene_ID Gene_Symbol Reagent_ID Score Phenotype Conditions Follow_Up Comment Screen_Title Publication_Title Authors Publication_Year Pubmed_ID Biosource Biomodel Assay Method Library Scope Reagent_Type Score_Type Cutoff Notes
GR00002-A 3355013 FBgn0004833 Gprk1 DRSC20732 -0.092544492 none no Lipid storage COPI complex is a regulator of lipid homeostasis. Beller et al. 2008 19067489 Cell line Kc167 Nuclear to lipid droplet cross-sectional area Fluorescence np Genome-wide dsRNA B-score > 2 OR < -1.7 Additional information about a secondary screen with non-overlaping dsRNAs
GR00002-A 3355013 FBgn0004833 Gprk1 DRSC20732 -0.511293355 none no Lipid storage COPI complex is a regulator of lipid homeostasis. Beller et al. 2008 19067489 Cell line Kc167 Nuclear to lipid droplet cross-sectional area Fluorescence np Genome-wide dsRNA B-score > 2 OR < -1.7 Additional information about a secondary screen with non-overlaping dsRNAs
GR00002-A 3355013 FBgn0004833 Gprk1 DRSC20916 -0.181060691 none no Lipid storage COPI complex is a regulator of lipid homeostasis. Beller et al. 2008 19067489 Cell line Kc167 Nuclear to lipid droplet cross-sectional area Fluorescence np Genome-wide dsRNA B-score > 2 OR < -1.7 Additional information about a secondary screen with non-overlaping dsRNAs
GR00002-A 3355013 FBgn0004833 Gprk1 DRSC20916 -2.26831558 none no Lipid storage COPI complex is a regulator of lipid homeostasis. Beller et al. 2008 19067489 Cell line Kc167 Nuclear to lipid droplet cross-sectional area Fluorescence np Genome-wide dsRNA B-score > 2 OR < -1.7 Additional information about a secondary screen with non-overlaping dsRNAs
GR00002-A 3355013 DRSC21245 -1.207257587 none no Lipid storage COPI complex is a regulator of lipid homeostasis. Beller et al. 2008 19067489 Cell line Kc167 Nuclear to lipid droplet cross-sectional area Fluorescence np Genome-wide dsRNA B-score > 2 OR < -1.7 Additional information about a secondary screen with non-overlaping dsRNAs
GR00002-A 3355013 DRSC21245 -0.127266717 none no Lipid storage COPI complex is a regulator of lipid homeostasis. Beller et al. 2008 19067489 Cell line Kc167 Nuclear to lipid droplet cross-sectional area Fluorescence np Genome-wide dsRNA B-score > 2 OR < -1.7 Additional information about a secondary screen with non-overlaping dsRNAs
GR00031-A-1 3355013 HFA21245 0 none yes Cell growth and viability (1) Genome-wide RNAi analysis of growth and viability in Drosophila cells. Boutros et al. 2004 14764878 Cell line Kc167 Cell number and viability Luminescence Custom-made (HFA) Genome-wide dsRNA Z-score >
GR00031-A-1 3355013 HFA20916 -1.4 none yes Cell growth and viability (1) Genome-wide RNAi analysis of growth and viability in Drosophila cells. Boutros et al. 2004 14764878 Cell line Kc167 Cell number and viability Luminescence Custom-made (HFA) Genome-wide dsRNA Z-score >
GR00031-A-1 3355013 HFA20732 0.4 none yes Cell growth and viability (1) Genome-wide RNAi analysis of growth and viability in Drosophila cells. Boutros et al. 2004 14764878 Cell line Kc167 Cell number and viability Luminescence Custom-made (HFA) Genome-wide dsRNA Z-score >
GR00031-A-2 3355013 HFA20732 1 none no Cell growth and viability (2) Genome-wide RNAi analysis of growth and viability in Drosophila cells. Boutros et al. 2004 14764878 Cell line S2R+ Cell number and viability Luminescence Custom-made (HFA) Genome-wide dsRNA Z-score >
GR00031-A-2 3355013 HFA20916 -1.4 none no Cell growth and viability (2) Genome-wide RNAi analysis of growth and viability in Drosophila cells. Boutros et al. 2004 14764878 Cell line S2R+ Cell number and viability Luminescence Custom-made (HFA) Genome-wide dsRNA Z-score >
GR00031-A-2 3355013 HFA21245 -0.2 none no Cell growth and viability (2) Genome-wide RNAi analysis of growth and viability in Drosophila cells. Boutros et al. 2004 14764878 Cell line S2R+ Cell number and viability Luminescence Custom-made (HFA) Genome-wide dsRNA Z-score >
GR00201-A-1 3355013 FBgn0004833 Gprk1 CG40129(Gprk1) (Baum_Lab) np none yes Actin organization and cell morphology (1) Parallel RNAi screens across different cell lines identify generic and cell type-specific regulators of actin organization and cell morphology. Liu et al. 2009 19265526 Cell line S2 alpha-Tubulin and F-actin protein expression Fluorescence Custom-made Kinases dsRNA Visual inspection np
GR00201-A-2 3355013 FBgn0004833 Gprk1 CG40129(Gprk1) (Baum_Lab) np Altered cell morphology yes Actin organization and cell morphology (2) Parallel RNAi screens across different cell lines identify generic and cell type-specific regulators of actin organization and cell morphology. Liu et al. 2009 19265526 Cell line S2R+ alpha-Tubulin and F-actin protein expression Fluorescence Custom-made Kinases dsRNA Visual inspection np
GR00201-A-3 3355013 FBgn0004833 Gprk1 CG40129(Gprk1) (Baum_Lab) np none yes Actin organization and cell morphology (3) Parallel RNAi screens across different cell lines identify generic and cell type-specific regulators of actin organization and cell morphology. Liu et al. 2009 19265526 Cell line Kc167 alpha-Tubulin and F-actin protein expression Fluorescence Custom-made Kinases dsRNA Visual inspection np
GR00201-A-4 3355013 FBgn0004833 Gprk1 CG40129(Gprk1) (Baum_Lab) np Altered cell morphology yes Actin organization and cell morphology (4) Parallel RNAi screens across different cell lines identify generic and cell type-specific regulators of actin organization and cell morphology. Liu et al. 2009 19265526 Cell line BG2-c2 alpha-Tubulin and F-actin protein expression Fluorescence Custom-made Kinases dsRNA Visual inspection np
GR00201-A-5 3355013 FBgn0004833 Gprk1 CG40129(Gprk1) (Baum_Lab) np Altered cell morphology yes Actin organization and cell morphology (5) Parallel RNAi screens across different cell lines identify generic and cell type-specific regulators of actin organization and cell morphology. Liu et al. 2009 19265526 Cell line BG3-c1 alpha-Tubulin and F-actin protein expression Fluorescence Custom-made Kinases dsRNA Visual inspection np
GR00201-A-6 3355013 FBgn0004833 Gprk1 CG40129(Gprk1) (Baum_Lab) np Altered cell morphology no Actin organization and cell morphology (6) Parallel RNAi screens across different cell lines identify generic and cell type-specific regulators of actin organization and cell morphology. Liu et al. 2009 19265526 Cell line BG3-c2 alpha-Tubulin and F-actin protein expression Fluorescence Custom-made Kinases dsRNA Visual inspection np
GR00214-A-1 3355013 FBgn0260798 Gprk1 DRSC20916 0.15 none 10 minutes EGF stimulation yes RTK-Ras-ERK pathway regulation (1) Proteomic and functional genomic landscape of receptor tyrosine kinase and ras to extracellular signal-regulated kinase signaling. Friedman et al. 2011 22028469 Cell line S2R+ ERK phosphorylation Fluorescence np Genome-wide dsRNA Z-score > 1.5 OR < -1.5
GR00214-A-1 3355013 FBgn0260798 Gprk1 DRSC20916 2.83 Increased ERK phosphorylation after EGF stimulation 0 minutes EGF stimulation yes RTK-Ras-ERK pathway regulation (1) Proteomic and functional genomic landscape of receptor tyrosine kinase and ras to extracellular signal-regulated kinase signaling. Friedman et al. 2011 22028469 Cell line S2R+ ERK phosphorylation Fluorescence np Genome-wide dsRNA Z-score > 1.5 OR < -1.5
GR00214-A-2 3355013 FBgn0260798 Gprk1 DRSC20916 -0.34 none 30 minutes sSpitz stimulation no RTK-Ras-ERK pathway regulation (2) Proteomic and functional genomic landscape of receptor tyrosine kinase and ras to extracellular signal-regulated kinase signaling. Friedman et al. 2011 22028469 Cell line Kc167 ERK phosphorylation Fluorescence np Genome-wide dsRNA Z-score > 1.5 OR < -1.5
GR00214-A-2 3355013 FBgn0260798 Gprk1 DRSC20916 0.28 none 10 minutes sSpitz stimulation no RTK-Ras-ERK pathway regulation (2) Proteomic and functional genomic landscape of receptor tyrosine kinase and ras to extracellular signal-regulated kinase signaling. Friedman et al. 2011 22028469 Cell line Kc167 ERK phosphorylation Fluorescence np Genome-wide dsRNA Z-score > 1.5 OR < -1.5
GR00218-S 3355013 CG40129 Gprk1 AMB32491 -0.39 none no Hippo pathway regulation Salt-inducible kinases regulate growth through the Hippo signalling pathway in Drosophila Wehr et al. 2013 23263283 Cell line S2R+ Hippo pathway reporter Luminescence np Genome-wide dsRNA Z-score > 3 OR < -3 Author-submitted data. Primary screen
GR00311-A 3355013 FBgn0260798 Gprk1 DRSC20916 np none Actin and microtubule morphology Comparative RNAi screening identifies a conserved core metazoan actinome by phenotype Rohn et al. 2011 21893601 Cell line S2R+ Alpha-tubulin and F-actin protein expression Fluorescence DRSC Genome-wide dsRNA Visual inspection np Exact phenotypes are shown in the comment section. Several genes were indicated as hits but no phenotype was provided. The screen data plus images is available at http://jcb-dataviewer.rupress.org/jcb/browse/4609/S2.
GR00311-A 3355013 np np DRSC21245 np none Actin and microtubule morphology Comparative RNAi screening identifies a conserved core metazoan actinome by phenotype Rohn et al. 2011 21893601 Cell line S2R+ Alpha-tubulin and F-actin protein expression Fluorescence DRSC Genome-wide dsRNA Visual inspection np Exact phenotypes are shown in the comment section. Several genes were indicated as hits but no phenotype was provided. The screen data plus images is available at http://jcb-dataviewer.rupress.org/jcb/browse/4609/S2.
GR00311-A 3355013 FBgn0260798 Gprk1 DRSC20732 np none Actin and microtubule morphology Comparative RNAi screening identifies a conserved core metazoan actinome by phenotype Rohn et al. 2011 21893601 Cell line S2R+ Alpha-tubulin and F-actin protein expression Fluorescence DRSC Genome-wide dsRNA Visual inspection np Exact phenotypes are shown in the comment section. Several genes were indicated as hits but no phenotype was provided. The screen data plus images is available at http://jcb-dataviewer.rupress.org/jcb/browse/4609/S2.
GR00335-A 3355013 FBgn0260798 Gprk1 JF02990 np none Germline stem cell (GSC) regulation A Regulatory Network of Drosophila Germline Stem Cell Self-Renewal Yan et al. 2014 24576427 Tissue MTD-GAL4 or UAS-dcr2; nanos-GAL4 Spectrin and vasa protein expression Fluorescence TRiP Selected genes UAS-IR construct Visual inspection np More detailed phenotypes for some genes are shown in the comment. Various VALIUM vectors were used.
3355013 FBgn0260798 np np sp none
GR00370-A 3355013 FBgn0004833 Gprk1 -0.37 none Regulation of Nrf2 homolog CncC Cdk12 Is A Gene-Selective RNA Polymerase II Kinase That Regulates a Subset of the Transcriptome, Including Nrf2 Target Genes Li et al. 2016 26911346 Cell line S2 CncC reporter Luminescence HD2 Kinases dsRNA Z-Score <-1.65 OR >1.65
GR00370-A 3355013 FBgn0004833 Gprk1 -0.91 none Regulation of Nrf2 homolog CncC Cdk12 Is A Gene-Selective RNA Polymerase II Kinase That Regulates a Subset of the Transcriptome, Including Nrf2 Target Genes Li et al. 2016 26911346 Cell line S2 CncC reporter Luminescence HD2 Kinases dsRNA Z-Score <-1.65 OR >1.65
GR00370-A 3355013 FBgn0004833 Gprk1 -0.6 none Regulation of Nrf2 homolog CncC Cdk12 Is A Gene-Selective RNA Polymerase II Kinase That Regulates a Subset of the Transcriptome, Including Nrf2 Target Genes Li et al. 2016 26911346 Cell line S2 CncC reporter Luminescence HD2 Kinases dsRNA Z-Score <-1.65 OR >1.65
GR00388-A 3355013 CG40129 BL28354 none Regulation of intestinal stem cells (ISC) Genome-wide RNAi Screen Identifies Networks Involved in Intestinal Stem Cell Regulation in Drosophila Zeng et al. 2015 25704823 Tissue act5C-GAL4 Viability Visual inspection VDRC and BDSC Genome-wide UAS-IR construct np np Lethal transgenic lines identified from the primary screen were crossed with temperature-sensitive esg-GAL4 flies. Phenotypes of ISCs from the dissected midguts are shown in the "Comment" section.