RNAi

Gene Info

  • Species:Fly (Drosophila melanogaster)
  • GeneID:34958
  • Symbol:CG17329
  • Description:uncharacterized protein
DataSource: http://genomernai.dkfz.de/v16/genedetails/34958

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Stable_ID Entrez_ID Gene_ID Gene_Symbol Reagent_ID Score Phenotype Conditions Follow_Up Comment Screen_Title Publication_Title Authors Publication_Year Pubmed_ID Biosource Biomodel Assay Method Library Scope Reagent_Type Score_Type Cutoff Notes
GR00002-A 34958 FBgn0028896 CG17329 DRSC01926 -0.686001973 none no Lipid storage COPI complex is a regulator of lipid homeostasis. Beller et al. 2008 19067489 Cell line Kc167 Nuclear to lipid droplet cross-sectional area Fluorescence np Genome-wide dsRNA B-score > 2 OR < -1.7 Additional information about a secondary screen with non-overlaping dsRNAs
GR00002-A 34958 FBgn0028896 CG17329 DRSC01926 -0.409458453 none no Lipid storage COPI complex is a regulator of lipid homeostasis. Beller et al. 2008 19067489 Cell line Kc167 Nuclear to lipid droplet cross-sectional area Fluorescence np Genome-wide dsRNA B-score > 2 OR < -1.7 Additional information about a secondary screen with non-overlaping dsRNAs
GR00031-A-1 34958 HFA01926 -0.1 none yes Cell growth and viability (1) Genome-wide RNAi analysis of growth and viability in Drosophila cells. Boutros et al. 2004 14764878 Cell line Kc167 Cell number and viability Luminescence Custom-made (HFA) Genome-wide dsRNA Z-score >
GR00031-A-2 34958 HFA01926 -0.9 none no Cell growth and viability (2) Genome-wide RNAi analysis of growth and viability in Drosophila cells. Boutros et al. 2004 14764878 Cell line S2R+ Cell number and viability Luminescence Custom-made (HFA) Genome-wide dsRNA Z-score >
34958 FBgn0028896 CG17329 AT18988 sp none no library: DGC2
GR00062-A 34958 FBgn0028896 CG17329 np 2 Decreased Ca2+ influx Ca2+ channel regulation CRACM1 is a plasma membrane protein essential for store-operated Ca2+ entry. Vig et al. 2006 16645049 Cell line S2R+ Ca2+ influx Fluorescence np Genome-wide dsRNA Complex, sp >
GR00134-A-1 34958 CG17329 CG17329 19171 np Flightless yes Muscle morphogenesis and function (1) Systematic genetic analysis of muscle morphogenesis and function in Drosophila. Schnorrer et al. 2010 20220848 Tissue Mef2-GAL4 Posture, locomotion, flight and viability Visual inspection np Genome-wide UAS-IR construct rp S19 > 0.5
GR00134-A-4 34958 CG17329 CG17329 19171 np none no Muscle morphogenesis and function (4) Systematic genetic analysis of muscle morphogenesis and function in Drosophila. Schnorrer et al. 2010 20220848 Tissue Mef2-GAL4 F-actin protein expression Fluorescence np Selected genes UAS-IR construct np np
GR00135-A-1 34958 CG17329 CG17329 19171 0.38 none yes Heat nociception (1) A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionarily conserved pain gene. Neely et al. 2010 21074052 Organism elav-GAL4 Noxious heat avoidance and viability Fly count np Genome-wide UAS-IR construct Z-score > 1.65 Additional information about secondary screens (geotactic, phototaxis, and temperature sensitivity)
GR00142-A-1 34958 CG17329 CG17329 19171 0.573529411764705 none no Serratia marcescens infection (1) Genome-wide RNAi screen identifies genes involved in intestinal pathogenic bacterial infection. Cronin et al. 2009 19520911 Organism HSP70-GAL4; TubGAL80ts Heat shock and viability Fly count np Random genes UAS-IR construct Days life time (LT50) < -1.5 SD OR > 2 SD
GR00144-A-4 34958 CG17329 19171 5 Bristle morphology defects no not lethal Notch pathway regulation (4) Genome-wide analysis of Notch signalling in Drosophila by transgenic RNAi. Mummery-Widmer et al. 2009 19363474 Tissue pnr-GAL4 External sensory organ morphology and viability Visual inspection np Genome-wide UAS-IR construct Phenotype strength np
GR00152-A 34958 CG17329 CG17329 np -1.3044 none no without Notch stimulation Notch induced transcription Modifiers of notch transcriptional activity identified by genome-wide RNAi. Mourikis et al. 2010 20959007 Cell line Kc167 Notch pathway reporter Luminescence np Genome-wide dsRNA Z-score < -2 OR > 2 (con-luc) OR < -1.8 OR > 1.8 (m3-luc) Additional information about secondary screens
GR00152-A 34958 CG17329 CG17329 np -0.67249 none no N(delta)ecn Notch stimulation; m3-luc normalization Notch induced transcription Modifiers of notch transcriptional activity identified by genome-wide RNAi. Mourikis et al. 2010 20959007 Cell line Kc167 Notch pathway reporter Luminescence np Genome-wide dsRNA Z-score < -2 OR > 2 (con-luc) OR < -1.8 OR > 1.8 (m3-luc) Additional information about secondary screens
GR00152-A 34958 CG17329 CG17329 np -2.6934 Downregulation of Notch pathway after Notch stimulation no N(delta)ecn Notch stimulation; con-luc normalization Notch induced transcription Modifiers of notch transcriptional activity identified by genome-wide RNAi. Mourikis et al. 2010 20959007 Cell line Kc167 Notch pathway reporter Luminescence np Genome-wide dsRNA Z-score < -2 OR > 2 (con-luc) OR < -1.8 OR > 1.8 (m3-luc) Additional information about secondary screens
GR00170-A-1 34958 CG17329 DRSC01926 -3.3 Decreased HIF dependent transcription with desferrioxamine yes HIF-dependent transcription (1) Drosophila genome-wide RNAi screen identifies multiple regulators of HIF-dependent transcription in hypoxia. Dekanty et al. 2010 20585616 Cell line S2 Hypoxia inducible HRE reporter Luminescence DRSC 1.0 library Genome-wide dsRNA Z-score <
GR00170-A-2 34958 CG17329 DRSC28365 18.8 none no desferrioxamine inhibition < 50 % HIF-dependent transcription (2) Drosophila genome-wide RNAi screen identifies multiple regulators of HIF-dependent transcription in hypoxia. Dekanty et al. 2010 20585616 Cell line S2 Hypoxia inducible HRE reporter Luminescence DRSC 2.0 library Selected genes dsRNA Percentage Group A: > 75 %; group B: 50 – 75 % by at least one dsRNA
GR00170-A-2 34958 CG17329 np np none no desferrioxamine inhibition < 50 % HIF-dependent transcription (2) Drosophila genome-wide RNAi screen identifies multiple regulators of HIF-dependent transcription in hypoxia. Dekanty et al. 2010 20585616 Cell line S2 Hypoxia inducible HRE reporter Luminescence DRSC 2.0 library Selected genes dsRNA Percentage Group A: > 75 %; group B: 50 – 75 % by at least one dsRNA
GR00189-A-1 34958 FBgn0028896 CG17329 BKN30337 np Upregulation of Notch pathway no Notch pathway regulation (1) A combined ex vivo and in vivo RNAi screen for notch regulators in Drosophila reveals an extensive notch interaction network. Saj et al. 2010 20493818 Cell line S2 Notch pathway reporter Luminescence BKN Genome-wide dsRNA Complex, sp Complex criteria
GR00190-A-1 34958 FBgn0028896 CG17329 19171 -0.457 none no Adiposity regulation (1) Drosophila genome-wide obesity screen reveals hedgehog as a determinant of brown versus white adipose cell fate. Pospisilik et al. 2010 20074523 Organism Hsp70-GAL4;Tub-GAL80ts Total fly triglyceride expression Colorimetrics np Genome-wide UAS-IR construct Triglyceride change Z-score > 1.65 after 3 screening rounds Additional information about the primary screen
GR00218-S 34958 CG17329 AMB20957 -0.8 none no Hippo pathway regulation Salt-inducible kinases regulate growth through the Hippo signalling pathway in Drosophila Wehr et al. 2013 23263283 Cell line S2R+ Hippo pathway reporter Luminescence np Genome-wide dsRNA Z-score > 3 OR < -3 Author-submitted data. Primary screen
GR00282-A 34958 CG17329 CG17329 19171 np none piRNA pathway regulation The Genetic Makeup of the Drosophila piRNA Pathway Handler 2013 23665231 Tissue tj-GAL4 Gypsy transposon expression Microscopy VDRC Selected genes UAS-IR construct Visual inspection np See comment for ovarian morphology data. Gene expression data shown in the comment derive from an ovarian stem cell line. VDRC library: KK and GD used, see phenotype data
GR00311-A 34958 FBgn0028896 CG17329 DRSC01926 np none Actin and microtubule morphology Comparative RNAi screening identifies a conserved core metazoan actinome by phenotype Rohn et al. 2011 21893601 Cell line S2R+ Alpha-tubulin and F-actin protein expression Fluorescence DRSC Genome-wide dsRNA Visual inspection np Exact phenotypes are shown in the comment section. Several genes were indicated as hits but no phenotype was provided. The screen data plus images is available at http://jcb-dataviewer.rupress.org/jcb/browse/4609/S2.
34958 FBgn0028896 np np sp none
GR00367-S 34958 CG17329 19171 np lethal or adult morphology phenotype VDRC Drosophila airway maturation Transient junction anisotropies orient annular cell polarization in the Drosophila airway tubes Hosono et al. 2015 26551273 Tissue btl-GAL4 Liquid clearance defect and viability Visual inspection VDRC, Trip, NIG Genome-wide UAS-IR construct Frequency >30%
GR00388-A 34958 CG17329 GD19171 Lethal Regulation of intestinal stem cells (ISC) Genome-wide RNAi Screen Identifies Networks Involved in Intestinal Stem Cell Regulation in Drosophila Zeng et al. 2015 25704823 Tissue act5C-GAL4 Viability Visual inspection VDRC and BDSC Genome-wide UAS-IR construct np np Lethal transgenic lines identified from the primary screen were crossed with temperature-sensitive esg-GAL4 flies. Phenotypes of ISCs from the dissected midguts are shown in the "Comment" section.